From 560a1a779cbb8f4846c802cf75948af8c258af32 Mon Sep 17 00:00:00 2001
From: Daniel J <daniel.jana@epfl.ch>
Date: Tue, 11 Mar 2025 19:40:22 +0100
Subject: [PATCH 1/2] add corrected version of cdo

---
 stacks/pinot-noir/definitions_stack.yaml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/stacks/pinot-noir/definitions_stack.yaml b/stacks/pinot-noir/definitions_stack.yaml
index 86c88c0..8275d2e 100644
--- a/stacks/pinot-noir/definitions_stack.yaml
+++ b/stacks/pinot-noir/definitions_stack.yaml
@@ -66,6 +66,7 @@ definitions:
   - gcc_serial_codes:
       - bwa
       - cdo ^fftw ~mpi ^hdf5 ~mpi
+      - cdo +netcdf ~openmp ^fftw ~mpi ^hdf5 ~mpi
       - eigen
       - ffmpeg
       - glpk+gmp
-- 
GitLab


From 851d20a3f9c2aca20dc1a7301a385e9794941a3a Mon Sep 17 00:00:00 2001
From: Daniel J <daniel.jana@epfl.ch>
Date: Wed, 12 Mar 2025 10:43:04 +0100
Subject: [PATCH 2/2] removing the broken cdo

---
 stacks/pinot-noir/definitions_stack.yaml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/stacks/pinot-noir/definitions_stack.yaml b/stacks/pinot-noir/definitions_stack.yaml
index 8275d2e..30dd861 100644
--- a/stacks/pinot-noir/definitions_stack.yaml
+++ b/stacks/pinot-noir/definitions_stack.yaml
@@ -65,7 +65,6 @@ definitions:
 
   - gcc_serial_codes:
       - bwa
-      - cdo ^fftw ~mpi ^hdf5 ~mpi
       - cdo +netcdf ~openmp ^fftw ~mpi ^hdf5 ~mpi
       - eigen
       - ffmpeg
-- 
GitLab