From a968d3917e9e4dc1dc3f0564208192f898c82241 Mon Sep 17 00:00:00 2001
From: Nicolas Richart <networms@gmail.ch>
Date: Fri, 14 Mar 2025 00:12:58 +0100
Subject: [PATCH 1/7] Linting old stack
---
stacks/pinot-noir-gcc/concretizer_common.yaml | 1 +
stacks/pinot-noir-gcc/config_common.yaml | 5 +-
.../pinot-noir-gcc/definitions_acc_cuda.yaml | 1 +
.../pinot-noir-gcc/definitions_acc_none.yaml | 1 +
stacks/pinot-noir-gcc/definitions_jed.yaml | 1 +
stacks/pinot-noir-gcc/modules_acc_none.yaml | 1 +
stacks/pinot-noir-gcc/modules_common.yaml | 39 ++---
stacks/pinot-noir-gcc/modules_empty.yaml | 1 +
stacks/pinot-noir-gcc/modules_kuma-h100.yaml | 1 +
stacks/pinot-noir-gcc/modules_kuma-l40s.yaml | 7 +-
stacks/pinot-noir-gcc/packages_common.yaml | 1 +
stacks/pinot-noir-gcc/packages_helvetios.yaml | 7 +-
stacks/pinot-noir-gcc/packages_izar.yaml | 7 +-
stacks/pinot-noir-gcc/packages_jed.yaml | 51 +++----
stacks/pinot-noir-gcc/packages_kuma-h100.yaml | 49 +++----
stacks/pinot-noir-gcc/packages_kuma-l40s.yaml | 49 +++----
stacks/pinot-noir-gcc/packages_stack.yaml | 135 +++++++++---------
stacks/pinot-noir-gcc/spack.yaml | 17 ++-
18 files changed, 193 insertions(+), 181 deletions(-)
diff --git a/stacks/pinot-noir-gcc/concretizer_common.yaml b/stacks/pinot-noir-gcc/concretizer_common.yaml
index 698e4c7..161462e 100644
--- a/stacks/pinot-noir-gcc/concretizer_common.yaml
+++ b/stacks/pinot-noir-gcc/concretizer_common.yaml
@@ -1,3 +1,4 @@
+---
concretizer:
reuse: false
unify: false
diff --git a/stacks/pinot-noir-gcc/config_common.yaml b/stacks/pinot-noir-gcc/config_common.yaml
index bac71f0..298e84c 100644
--- a/stacks/pinot-noir-gcc/config_common.yaml
+++ b/stacks/pinot-noir-gcc/config_common.yaml
@@ -1,9 +1,10 @@
+---
config:
-# ccache: true
+ # ccache: true
install_missing_compilers: false
install_tree:
- padded_length: False
+ padded_length: false
build_stage:
- $tempdir/$user/spack-stage
diff --git a/stacks/pinot-noir-gcc/definitions_acc_cuda.yaml b/stacks/pinot-noir-gcc/definitions_acc_cuda.yaml
index 154a251..6b1aa0c 100644
--- a/stacks/pinot-noir-gcc/definitions_acc_cuda.yaml
+++ b/stacks/pinot-noir-gcc/definitions_acc_cuda.yaml
@@ -1,3 +1,4 @@
+---
definitions:
- cuda_system_codes:
- cuda
diff --git a/stacks/pinot-noir-gcc/definitions_acc_none.yaml b/stacks/pinot-noir-gcc/definitions_acc_none.yaml
index ca4ba7f..8915271 100644
--- a/stacks/pinot-noir-gcc/definitions_acc_none.yaml
+++ b/stacks/pinot-noir-gcc/definitions_acc_none.yaml
@@ -1 +1,2 @@
+---
definitions: []
diff --git a/stacks/pinot-noir-gcc/definitions_jed.yaml b/stacks/pinot-noir-gcc/definitions_jed.yaml
index 0f156fa..3861e72 100644
--- a/stacks/pinot-noir-gcc/definitions_jed.yaml
+++ b/stacks/pinot-noir-gcc/definitions_jed.yaml
@@ -1,3 +1,4 @@
+---
definitions:
- cuda_system_codes:
- cuda
diff --git a/stacks/pinot-noir-gcc/modules_acc_none.yaml b/stacks/pinot-noir-gcc/modules_acc_none.yaml
index 21d0544..cabc79d 100644
--- a/stacks/pinot-noir-gcc/modules_acc_none.yaml
+++ b/stacks/pinot-noir-gcc/modules_acc_none.yaml
@@ -1,3 +1,4 @@
+---
modules:
default:
lmod: {}
diff --git a/stacks/pinot-noir-gcc/modules_common.yaml b/stacks/pinot-noir-gcc/modules_common.yaml
index fd20133..e715d73 100644
--- a/stacks/pinot-noir-gcc/modules_common.yaml
+++ b/stacks/pinot-noir-gcc/modules_common.yaml
@@ -1,3 +1,4 @@
+---
modules:
prefix_inspections:
./lib64: [LD_LIBRARY_PATH]
@@ -15,19 +16,19 @@ modules:
set:
"{name}_ROOT": "{prefix}"
suffixes:
- '+mpi': mpi
- '+openmp': openmp
- 'threads=openmp': openmp
- '^fftw+openmp': openmp
- 'hdf5=parallel': h5
- '+cuda': cuda
- '+double-gpu': double-gpu
- '+plumed': plumed
- '+unwind': unwind
- '+debug': dbg
- '+ilp64': int64
- '+int64': int64
- 'version_suffix=jl': julia
+ "+mpi": mpi
+ "+openmp": openmp
+ "threads=openmp": openmp
+ "^fftw+openmp": openmp
+ "hdf5=parallel": h5
+ "+cuda": cuda
+ "+double-gpu": double-gpu
+ "+plumed": plumed
+ "+unwind": unwind
+ "+debug": dbg
+ "+ilp64": int64
+ "+int64": int64
+ "version_suffix=jl": julia
autoload: run
hide_implicits: true
@@ -52,13 +53,13 @@ modules:
environment:
set:
SLURM_MPI_TYPE: pmix
- OMPI_MCA_btl_openib_warn_default_gid_prefix: '0'
+ OMPI_MCA_btl_openib_warn_default_gid_prefix: "0"
append_path:
JULIA_LOAD_PATH: ":/ssoft/spack/external/julia/syrah.v1/mpi"
openblas threads=pthreads:
environment:
set:
- OPENBLAS_NUM_THREADS: '1'
+ OPENBLAS_NUM_THREADS: "1"
hdf5~mpi+cxx:
environment:
set:
@@ -74,7 +75,7 @@ modules:
environment:
set:
I_MPI_PMI_LIBRARY: /usr/lib64/libpmi2.so
- I_MPI_EXTRA_FILESYSTEM: '0'
+ I_MPI_EXTRA_FILESYSTEM: "0"
SLURM_MPI_TYPE: pmi2
metis:
suffixes:
@@ -86,14 +87,14 @@ modules:
set:
PLUMED_KERNEL: "{prefix}/lib/libplumedKernel.so"
unset:
- - PLUMED_ROOT
+ - PLUMED_ROOT
quantum-espresso:
suffixes:
hdf5=parallel: hdf5
scons:
suffixes:
- '^python@:2.99': py2
- '^python@3:': py3
+ "^python@:2.99": py2
+ "^python@3:": py3
abaqus:
template: modules/group_restricted.lua
diff --git a/stacks/pinot-noir-gcc/modules_empty.yaml b/stacks/pinot-noir-gcc/modules_empty.yaml
index 21d0544..cabc79d 100644
--- a/stacks/pinot-noir-gcc/modules_empty.yaml
+++ b/stacks/pinot-noir-gcc/modules_empty.yaml
@@ -1,3 +1,4 @@
+---
modules:
default:
lmod: {}
diff --git a/stacks/pinot-noir-gcc/modules_kuma-h100.yaml b/stacks/pinot-noir-gcc/modules_kuma-h100.yaml
index 4599ea4..6bb1f83 100644
--- a/stacks/pinot-noir-gcc/modules_kuma-h100.yaml
+++ b/stacks/pinot-noir-gcc/modules_kuma-h100.yaml
@@ -1,3 +1,4 @@
+---
modules:
default:
lmod:
diff --git a/stacks/pinot-noir-gcc/modules_kuma-l40s.yaml b/stacks/pinot-noir-gcc/modules_kuma-l40s.yaml
index 7be541d..e68a137 100644
--- a/stacks/pinot-noir-gcc/modules_kuma-l40s.yaml
+++ b/stacks/pinot-noir-gcc/modules_kuma-l40s.yaml
@@ -1,9 +1,10 @@
+---
modules:
default:
lmod:
openmpi:
environment:
set:
- OMPI_MCA_pml: 'ucx'
- OMPI_MCA_osc: 'ucx'
- UCX_NET_DEVICES: 'mlx5_0:1,mlx5_1:1'
+ OMPI_MCA_pml: "ucx"
+ OMPI_MCA_osc: "ucx"
+ UCX_NET_DEVICES: "mlx5_0:1,mlx5_1:1"
diff --git a/stacks/pinot-noir-gcc/packages_common.yaml b/stacks/pinot-noir-gcc/packages_common.yaml
index 01e4aa6..b238249 100644
--- a/stacks/pinot-noir-gcc/packages_common.yaml
+++ b/stacks/pinot-noir-gcc/packages_common.yaml
@@ -1,3 +1,4 @@
+---
packages:
all:
providers:
diff --git a/stacks/pinot-noir-gcc/packages_helvetios.yaml b/stacks/pinot-noir-gcc/packages_helvetios.yaml
index fe0d4ad..7c9421c 100644
--- a/stacks/pinot-noir-gcc/packages_helvetios.yaml
+++ b/stacks/pinot-noir-gcc/packages_helvetios.yaml
@@ -1,8 +1,5 @@
+---
packages:
all:
target: ["skylake_avx512"]
- require: ['~cuda', '~rocm']
-
- # py-torch:
- # require:
- # - spec: '~cuda ~cudnn ~nccl ~rocm'
+ require: ["~cuda", "~rocm"]
diff --git a/stacks/pinot-noir-gcc/packages_izar.yaml b/stacks/pinot-noir-gcc/packages_izar.yaml
index 9ce65d9..9ad6f6f 100644
--- a/stacks/pinot-noir-gcc/packages_izar.yaml
+++ b/stacks/pinot-noir-gcc/packages_izar.yaml
@@ -1,11 +1,12 @@
+---
packages:
all:
target: ["cannonlake"]
require:
- spec: ^openmpi +cuda
- when: '%gcc ^mpi'
+ when: "%gcc ^mpi"
- spec: cuda_arch=70
- when: '+cuda'
+ when: "+cuda"
- - '+cuda'
+ - "+cuda"
diff --git a/stacks/pinot-noir-gcc/packages_jed.yaml b/stacks/pinot-noir-gcc/packages_jed.yaml
index 822d1e2..0662680 100644
--- a/stacks/pinot-noir-gcc/packages_jed.yaml
+++ b/stacks/pinot-noir-gcc/packages_jed.yaml
@@ -1,3 +1,4 @@
+---
packages:
all:
target: ["icelake"]
@@ -5,57 +6,57 @@ packages:
- "~rocm"
- spec: cuda_arch=90 target=icelake
- when: '+cuda'
+ when: "+cuda"
# - spec: '~cuda'
# when: '%oneapi'
- - spec: '+cuda'
- when: '%gcc'
+ - spec: "+cuda"
+ when: "%gcc"
# ---------------------------------------------------------------------------
hypre:
require:
- - spec: '+cuda cuda_arch=90 +unified-memory'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=90 +unified-memory"
+ when: "%gcc"
kokkos:
require:
- - spec: '+cuda cuda_arch=90 +cuda_uvm +wrapper ~openmptarget'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=90 +cuda_uvm +wrapper ~openmptarget"
+ when: "%gcc"
kokkos-kernels:
require:
- - spec: '+cuda cuda_arch=90'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=90"
+ when: "%gcc"
openmpi:
require:
- - spec: '+cuda cuda_arch=90 target=icelake'
+ - spec: "+cuda cuda_arch=90 target=icelake"
petsc:
require:
- - spec: '+cuda cuda_arch=90'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=90"
+ when: "%gcc"
py-tensorflow:
require:
- - spec: '+cuda cuda_arch=90 +nccl'
+ - spec: "+cuda cuda_arch=90 +nccl"
py-torch:
require:
- - spec: '+cuda cuda_arch=90 +nccl +cudnn'
+ - spec: "+cuda cuda_arch=90 +nccl +cudnn"
quantum-espresso:
require:
- - spec: '~cuda'
+ - spec: "~cuda"
suite-sparse:
require:
- - spec: '+cuda'
+ - spec: "+cuda"
ucx:
require:
- - spec: '+xpmem +cma +rdmacm +rc +ud +dc +verbs +ib_hw_tm +gdrcopy +cuda cuda_arch=90 target=icelake ~rocm'
+ - spec: "+xpmem +cma +rdmacm +rc +ud +dc +verbs +ib_hw_tm +gdrcopy +cuda cuda_arch=90 target=icelake ~rocm"
# ---------------------------------------------------------------------------
# Externals
@@ -63,23 +64,23 @@ packages:
pmix:
buildable: false
externals:
- - spec: 'pmix@5.0.2'
- prefix: /usr
+ - spec: "pmix@5.0.2"
+ prefix: /usr
rdma-core:
buildable: false
externals:
- - spec: 'rdma-core@47.1'
- prefix: /usr
+ - spec: "rdma-core@47.1"
+ prefix: /usr
slurm:
buildable: false
externals:
- - spec: 'slurm@24-05-0-2'
- prefix: /usr
+ - spec: "slurm@24-05-0-2"
+ prefix: /usr
xpmem:
buildable: false
externals:
- - spec: 'xpmem@2.7.3'
- prefix: /usr
+ - spec: "xpmem@2.7.3"
+ prefix: /usr
diff --git a/stacks/pinot-noir-gcc/packages_kuma-h100.yaml b/stacks/pinot-noir-gcc/packages_kuma-h100.yaml
index b861a64..6eeda3a 100644
--- a/stacks/pinot-noir-gcc/packages_kuma-h100.yaml
+++ b/stacks/pinot-noir-gcc/packages_kuma-h100.yaml
@@ -1,3 +1,4 @@
+---
packages:
all:
target: ["zen4"]
@@ -5,54 +6,54 @@ packages:
- "~rocm"
- spec: cuda_arch=90 target=zen4
- when: '+cuda'
+ when: "+cuda"
- - spec: '+cuda'
- when: '%gcc'
+ - spec: "+cuda"
+ when: "%gcc"
# ---------------------------------------------------------------------------
hypre:
require:
- - spec: '+cuda cuda_arch=90 +unified-memory'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=90 +unified-memory"
+ when: "%gcc"
kokkos:
require:
- - spec: '+cuda cuda_arch=90 +cuda_uvm +wrapper ~openmptarget'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=90 +cuda_uvm +wrapper ~openmptarget"
+ when: "%gcc"
nvshmem:
require:
- - spec: '+cuda cuda_arch=90 +ibgda +nccl +ucx +mpi +pmix'
+ - spec: "+cuda cuda_arch=90 +ibgda +nccl +ucx +mpi +pmix"
openmpi:
require:
- - spec: '+cuda cuda_arch=90 target=zen4'
+ - spec: "+cuda cuda_arch=90 target=zen4"
petsc:
require:
- - spec: '+cuda cuda_arch=90'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=90"
+ when: "%gcc"
py-tensorflow:
require:
- - spec: '+cuda cuda_arch=90 +nccl'
+ - spec: "+cuda cuda_arch=90 +nccl"
py-torch:
require:
- - spec: '+cuda cuda_arch=90 +nccl +cudnn'
+ - spec: "+cuda cuda_arch=90 +nccl +cudnn"
quantum-espresso:
require:
- - spec: '~cuda'
+ - spec: "~cuda"
suite-sparse:
require:
- - spec: '+cuda'
+ - spec: "+cuda"
ucx:
require:
- - spec: '+xpmem +cma +rdmacm +rc +ud +dc +verbs +ib_hw_tm +gdrcopy +cuda cuda_arch=90 ~rocm target=zen4'
+ - spec: "+xpmem +cma +rdmacm +rc +ud +dc +verbs +ib_hw_tm +gdrcopy +cuda cuda_arch=90 ~rocm target=zen4"
# ---------------------------------------------------------------------------
# Externals
@@ -60,23 +61,23 @@ packages:
pmix:
buildable: false
externals:
- - spec: 'pmix@5.0.2'
- prefix: /usr
+ - spec: "pmix@5.0.2"
+ prefix: /usr
rdma-core:
buildable: false
externals:
- - spec: 'rdma-core@51.1'
- prefix: /usr
+ - spec: "rdma-core@51.1"
+ prefix: /usr
slurm:
buildable: false
externals:
- - spec: 'slurm@24-05-0-2'
- prefix: /usr
+ - spec: "slurm@24-05-0-2"
+ prefix: /usr
xpmem:
buildable: false
externals:
- - spec: 'xpmem@2.7.3'
- prefix: /usr
+ - spec: "xpmem@2.7.3"
+ prefix: /usr
diff --git a/stacks/pinot-noir-gcc/packages_kuma-l40s.yaml b/stacks/pinot-noir-gcc/packages_kuma-l40s.yaml
index 836cd9c..353a577 100644
--- a/stacks/pinot-noir-gcc/packages_kuma-l40s.yaml
+++ b/stacks/pinot-noir-gcc/packages_kuma-l40s.yaml
@@ -1,3 +1,4 @@
+---
packages:
all:
target: ["zen4"]
@@ -5,54 +6,54 @@ packages:
- "~rocm"
- spec: cuda_arch=89 target=zen4
- when: '+cuda'
+ when: "+cuda"
- - spec: '+cuda'
- when: '%gcc'
+ - spec: "+cuda"
+ when: "%gcc"
# ---------------------------------------------------------------------------
hypre:
require:
- - spec: '+cuda cuda_arch=89 +unified-memory'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=89 +unified-memory"
+ when: "%gcc"
kokkos:
require:
- - spec: '+cuda cuda_arch=89 +cuda_uvm +wrapper ~openmptarget'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=89 +cuda_uvm +wrapper ~openmptarget"
+ when: "%gcc"
nvshmem:
require:
- - spec: '+cuda cuda_arch=89 +ibgda +nccl +ucx +mpi +pmix'
+ - spec: "+cuda cuda_arch=89 +ibgda +nccl +ucx +mpi +pmix"
openmpi:
require:
- - spec: '+cuda cuda_arch=89 target=zen4'
+ - spec: "+cuda cuda_arch=89 target=zen4"
petsc:
require:
- - spec: '+cuda cuda_arch=89'
- when: '%gcc'
+ - spec: "+cuda cuda_arch=89"
+ when: "%gcc"
py-tensorflow:
require:
- - spec: '+cuda cuda_arch=89 +nccl'
+ - spec: "+cuda cuda_arch=89 +nccl"
py-torch:
require:
- - spec: '+cuda cuda_arch=89 +nccl +cudnn'
+ - spec: "+cuda cuda_arch=89 +nccl +cudnn"
quantum-espresso:
require:
- - spec: '~cuda'
+ - spec: "~cuda"
suite-sparse:
require:
- - spec: '+cuda'
+ - spec: "+cuda"
ucx:
require:
- - spec: '+xpmem +cma +rdmacm +rc +ud +dc +verbs +ib_hw_tm +gdrcopy +cuda cuda_arch=89 ~rocm target=zen4'
+ - spec: "+xpmem +cma +rdmacm +rc +ud +dc +verbs +ib_hw_tm +gdrcopy +cuda cuda_arch=89 ~rocm target=zen4"
# ---------------------------------------------------------------------------
# Externals
@@ -60,23 +61,23 @@ packages:
pmix:
buildable: false
externals:
- - spec: 'pmix@5.0.2'
- prefix: /usr
+ - spec: "pmix@5.0.2"
+ prefix: /usr
rdma-core:
buildable: false
externals:
- - spec: 'rdma-core@51.1'
- prefix: /usr
+ - spec: "rdma-core@51.1"
+ prefix: /usr
slurm:
buildable: false
externals:
- - spec: 'slurm@24-05-0-2'
- prefix: /usr
+ - spec: "slurm@24-05-0-2"
+ prefix: /usr
xpmem:
buildable: false
externals:
- - spec: 'xpmem@2.7.3'
- prefix: /usr
+ - spec: "xpmem@2.7.3"
+ prefix: /usr
diff --git a/stacks/pinot-noir-gcc/packages_stack.yaml b/stacks/pinot-noir-gcc/packages_stack.yaml
index 65bebbf..be9b291 100644
--- a/stacks/pinot-noir-gcc/packages_stack.yaml
+++ b/stacks/pinot-noir-gcc/packages_stack.yaml
@@ -1,3 +1,4 @@
+---
packages:
all:
providers:
@@ -18,17 +19,17 @@ packages:
boost:
prefer: ['~mpi']
require: ['cxxstd=14', '+icu', '+python', '+numpy', '+atomic', '+chrono',
- '+container', '+date_time', '+filesystem', '+graph', '+iostreams', '~json',
- '+locale', '+log', '+math', '~pic', '+program_options', '+random', '+regex',
- '+serialization', '+shared', '+signals', '~singlethreaded', '~stacktrace',
- '+system', '~taggedlayout', '+test', '+thread', '+timer', '~type_erasure',
- '~versionedlayout', '+wave', '+exception']
+ '+container', '+date_time', '+filesystem', '+graph', '+iostreams', '~json',
+ '+locale', '+log', '+math', '~pic', '+program_options', '+random', '+regex',
+ '+serialization', '+shared', '+signals', '~singlethreaded', '~stacktrace',
+ '+system', '~taggedlayout', '+test', '+thread', '+timer', '~type_erasure',
+ '~versionedlayout', '+wave', '+exception']
cuda:
require:
- - spec: '@12.4.0'
- - spec: '+allow-unsupported-compilers'
- when: '%oneapi'
+ - spec: '@12.4.0'
+ - spec: '+allow-unsupported-compilers'
+ when: '%oneapi'
fenics-dolfinx:
require: ['+slepc']
@@ -38,42 +39,42 @@ packages:
gnuplot:
require:
- - spec: '@5.4.10'
+ - spec: '@5.4.10'
hdf5:
prefer:
- - spec: '+mpi'
- - spec: '@1.14.3'
+ - spec: '+mpi'
+ - spec: '@1.14.3'
require:
- - spec: '+hl +threadsafe +szip +cxx +fortran'
- - spec: '+ipo'
- when: '%gcc'
+ - spec: '+hl +threadsafe +szip +cxx +fortran'
+ - spec: '+ipo'
+ when: '%gcc'
hypre:
prefer:
- - spec: '@2.31.0 ~magma'
+ - spec: '@2.31.0 ~magma'
intel-oneapi-mkl:
prefer: ['~cluster']
kokkos:
prefer: ['+openmp', '+numactl', '+memkind', '+threads',
- '+aggressive_vectorization']
+ '+aggressive_vectorization']
kokkos-kernel:
prefer: ['+openmp', '+threads']
lammps:
require: ['build_type=Release', '+asphere', '+atc', '+body', '+class2',
- '+colloid', '+compress', '+coreshell', '+dipole', '+diffraction', '+extra-dump',
- '+granular', '+h5md', '+kspace', '+latboltz', '+latte', '+lib', '+manybody',
- '+mc', '+misc', '+molecule', '+mpi', '+mpiio', '+netcdf', '+peri', '~poems',
- '+python', '+qeq', '+replica ', '+rigid', '+shock', '+ml-snap', '+srd',
- '+voronoi', '+plumed', '+kokkos']
+ '+colloid', '+compress', '+coreshell', '+dipole', '+diffraction', '+extra-dump',
+ '+granular', '+h5md', '+kspace', '+latboltz', '+latte', '+lib', '+manybody',
+ '+mc', '+misc', '+molecule', '+mpi', '+mpiio', '+netcdf', '+peri', '~poems',
+ '+python', '+qeq', '+replica ', '+rigid', '+shock', '+ml-snap', '+srd',
+ '+voronoi', '+plumed', '+kokkos']
libfabric:
require:
- - spec: 'fabrics=mlx,mrail,psm3,verbs,udp,tcp,sockets,shm'
+ - spec: 'fabrics=mlx,mrail,psm3,verbs,udp,tcp,sockets,shm'
llvm:
prefer: ['~clang']
@@ -98,17 +99,17 @@ packages:
openmpi:
require:
- - spec: '@5.0.3 fabrics=ofi,ucx,verbs schedulers=slurm ~rsh +romio romio-filesystem=gpfs +internal-pmix ~memchecker'
+ - spec: '@5.0.3 fabrics=ofi,ucx,verbs schedulers=slurm ~rsh +romio romio-filesystem=gpfs +internal-pmix ~memchecker'
petsc:
require:
- - spec: '+hypre +mumps +saws +scalapack +mpi +suite-sparse +kokkos'
+ - spec: '+hypre +mumps +saws +scalapack +mpi +suite-sparse +kokkos'
python:
require:
- - spec: '+ssl +tkinter'
- - spec: '+optimizations'
- when: '%gcc'
+ - spec: '+ssl +tkinter'
+ - spec: '+optimizations'
+ when: '%gcc'
py-tensorflow:
require: ['+mpi', '+mkl']
@@ -121,14 +122,14 @@ packages:
suite-sparse:
require:
- - spec: '+graphblas'
+ - spec: '+graphblas'
tk:
require: ['+xft', '+xss']
ucx:
require:
- - spec: '+rdmacm +rc +dc +ud +cma +verbs'
+ - spec: '+rdmacm +rc +dc +ud +cma +verbs'
# ----------------------------------------------------------------------------
# System dependencies
@@ -136,26 +137,26 @@ packages:
egl:
buildable: false
externals:
- - spec: 'egl@21.3.4'
- prefix: /usr
+ - spec: 'egl@21.3.4'
+ prefix: /usr
pmix:
buildable: false
externals:
- - spec: 'pmix@5.0.1'
- prefix: /usr
+ - spec: 'pmix@5.0.1'
+ prefix: /usr
rdma-core:
buildable: false
externals:
- - spec: 'rdma-core@47.1'
- prefix: /usr
+ - spec: 'rdma-core@47.1'
+ prefix: /usr
slurm:
buildable: false
externals:
- - spec: 'slurm@23-11-7-1'
- prefix: /usr
+ - spec: 'slurm@23-11-7-1'
+ prefix: /usr
# ----------------------------------------------------------------------------
@@ -165,70 +166,70 @@ packages:
buildable: false
permissions: {read: group, group: abaqus-soft}
externals:
- - {spec: abaqus@2019, prefix: /ssoft/spack/external/abaqus/2019}
- - {spec: abaqus@2023, prefix: /ssoft/spack/external/abaqus/2023}
+ - {spec: abaqus@2019, prefix: /ssoft/spack/external/abaqus/2019}
+ - {spec: abaqus@2023, prefix: /ssoft/spack/external/abaqus/2023}
ansys:
buildable: false
externals:
- - {spec: ansys@2020R2, prefix: /ssoft/spack/external/ansys/2020R2/v202}
- - {spec: ansys@2022R1, prefix: /ssoft/spack/external/ansys/2022R1/v221}
- - {spec: ansys@2022R2, prefix: /ssoft/spack/external/ansys/2022R2/v222}
- - {spec: ansys@2024R1, prefix: /ssoft/spack/external/ansys/2024R1/v241}
+ - {spec: ansys@2020R2, prefix: /ssoft/spack/external/ansys/2020R2/v202}
+ - {spec: ansys@2022R1, prefix: /ssoft/spack/external/ansys/2022R1/v221}
+ - {spec: ansys@2022R2, prefix: /ssoft/spack/external/ansys/2022R2/v222}
+ - {spec: ansys@2024R1, prefix: /ssoft/spack/external/ansys/2024R1/v241}
cfdplusplus:
buildable: false
externals:
- - {spec: cfdplusplus@16.1, prefix: /ssoft/spack/external/CFD++/2016.05}
- - {spec: cfdplusplus@19.1, prefix: /ssoft/spack/external/CFD++/19.1}
+ - {spec: cfdplusplus@16.1, prefix: /ssoft/spack/external/CFD++/2016.05}
+ - {spec: cfdplusplus@19.1, prefix: /ssoft/spack/external/CFD++/19.1}
comsol:
buildable: false
permissions: {read: group, group: comsol-soft}
externals:
- - {spec: comsol@5.6, prefix: /ssoft/spack/external/comsol/5.6/comsol56/multiphysics/}
- - {spec: comsol@6.0, prefix: /ssoft/spack/external/comsol/6.0}
- - {spec: comsol@6.2, prefix: /ssoft/spack/external/comsol/6.2}
+ - {spec: comsol@5.6, prefix: /ssoft/spack/external/comsol/5.6/comsol56/multiphysics/}
+ - {spec: comsol@6.0, prefix: /ssoft/spack/external/comsol/6.0}
+ - {spec: comsol@6.2, prefix: /ssoft/spack/external/comsol/6.2}
fdtd:
buildable: false
permissions: {read: group, group: fdtd-soft}
externals:
- - {spec: fdtd@2020-R2-2387, prefix: /ssoft/spack/external/fdtd/8.24.2387}
- - {spec: fdtd@2020-R2.4-2502, prefix: /ssoft/spack/external/fdtd/2020-R2.4-2502}
- - {spec: fdtd@2021-R2.2-2806, prefix: /ssoft/spack/external/fdtd/2021-R2.2-2806}
- - {spec: fdtd@2022-R1.1-2963, prefix: /ssoft/spack/external/fdtd/2022-R1.1-2963}
+ - {spec: fdtd@2020-R2-2387, prefix: /ssoft/spack/external/fdtd/8.24.2387}
+ - {spec: fdtd@2020-R2.4-2502, prefix: /ssoft/spack/external/fdtd/2020-R2.4-2502}
+ - {spec: fdtd@2021-R2.2-2806, prefix: /ssoft/spack/external/fdtd/2021-R2.2-2806}
+ - {spec: fdtd@2022-R1.1-2963, prefix: /ssoft/spack/external/fdtd/2022-R1.1-2963}
gaussian:
buildable: false
externals:
- - {spec: gaussian@g16-A.03, prefix: /ssoft/spack/external/gaussian/g16-A.03/avx2}
- - {spec: gaussian@g16-C.01, prefix: /ssoft/spack/external/gaussian/g16-C.01/avx2}
+ - {spec: gaussian@g16-A.03, prefix: /ssoft/spack/external/gaussian/g16-A.03/avx2}
+ - {spec: gaussian@g16-C.01, prefix: /ssoft/spack/external/gaussian/g16-C.01/avx2}
gurobi:
buildable: false
externals:
- - {spec: gurobi@8.1.1, prefix: /ssoft/spack/external/gurobi/8.1.1}
- - {spec: gurobi@9.5.2, prefix: /ssoft/spack/external/gurobi/9.5.2}
- - {spec: gurobi@10.0.1, prefix: /ssoft/spack/external/gurobi/10.0.1}
+ - {spec: gurobi@8.1.1, prefix: /ssoft/spack/external/gurobi/8.1.1}
+ - {spec: gurobi@9.5.2, prefix: /ssoft/spack/external/gurobi/9.5.2}
+ - {spec: gurobi@10.0.1, prefix: /ssoft/spack/external/gurobi/10.0.1}
maple:
buildable: false
externals:
- - {spec: maple@2017, prefix: /ssoft/spack/external/Maple/2017}
+ - {spec: maple@2017, prefix: /ssoft/spack/external/Maple/2017}
mathematica:
buildable: false
externals:
- - {spec: mathematica@11.1.1, prefix: /ssoft/spack/external/Mathematica/11.1.1}
- - {spec: mathematica@13.0, prefix: /ssoft/spack/external/Mathematica/13.0}
+ - {spec: mathematica@11.1.1, prefix: /ssoft/spack/external/Mathematica/11.1.1}
+ - {spec: mathematica@13.0, prefix: /ssoft/spack/external/Mathematica/13.0}
matlab:
buildable: false
externals:
- - {spec: matlab@R2018a, prefix: /ssoft/spack/external/MATLAB/R2018a}
- - {spec: matlab@R2019b, prefix: /ssoft/spack/external/MATLAB/R2019b}
- - {spec: matlab@R2024a, prefix: /ssoft/spack/external/MATLAB/R2024a}
+ - {spec: matlab@R2018a, prefix: /ssoft/spack/external/MATLAB/R2018a}
+ - {spec: matlab@R2019b, prefix: /ssoft/spack/external/MATLAB/R2019b}
+ - {spec: matlab@R2024a, prefix: /ssoft/spack/external/MATLAB/R2024a}
molpro:
buildable: false
externals:
- - {spec: molpro@2022.3.0, prefix: /ssoft/spack/external/molpro/2022.3.0/mpi}
+ - {spec: molpro@2022.3.0, prefix: /ssoft/spack/external/molpro/2022.3.0/mpi}
smr:
buildable: false
externals:
- - {spec: smr@2017.0, prefix: /ssoft/spack/external/SMR/2017.06}
+ - {spec: smr@2017.0, prefix: /ssoft/spack/external/SMR/2017.06}
totalview:
externals:
- - {spec: totalview@2017.2.11, prefix: /ssoft/spack/external/toolworks/totalview.2017.2.11}
- - {spec: totalview@2020.3.11, prefix: /ssoft/spack/external/toolworks/totalview.2020.3.11}
+ - {spec: totalview@2017.2.11, prefix: /ssoft/spack/external/toolworks/totalview.2017.2.11}
+ - {spec: totalview@2020.3.11, prefix: /ssoft/spack/external/toolworks/totalview.2020.3.11}
diff --git a/stacks/pinot-noir-gcc/spack.yaml b/stacks/pinot-noir-gcc/spack.yaml
index 05cae96..544be02 100644
--- a/stacks/pinot-noir-gcc/spack.yaml
+++ b/stacks/pinot-noir-gcc/spack.yaml
@@ -1,16 +1,17 @@
+---
spack:
include:
- - compiler_definitions.yaml
+ - compiler_definitions.yaml
- - packages_stack.yaml
- - packages_env.yaml
+ - packages_stack.yaml
+ - packages_env.yaml
- - modules_stack.yaml
- - modules_env.yaml
+ - modules_stack.yaml
+ - modules_env.yaml
- - definitions_env.yaml
+ - definitions_env.yaml
- - config_stack.yaml
+ - config_stack.yaml
definitions:
# -------------------------------------------------------------------------
@@ -103,5 +104,3 @@ spack:
- [$%compiler_gcc]
view: false
-# default:
-# root: /stack/packages/
--
GitLab
From 2b0a195d3ae7d984626d7c82ca31ea271ad874d5 Mon Sep 17 00:00:00 2001
From: Nicolas Richart <networms@gmail.ch>
Date: Fri, 14 Mar 2025 22:26:26 +0100
Subject: [PATCH 2/7] Linting config
---
.gitlab-ci.yml | 2 +-
.yamllint.yml | 5 +----
2 files changed, 2 insertions(+), 5 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index ea83b51..4c97350 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -1,6 +1,6 @@
# yaml-language-server: $schema=gitlab-ci
# yaml-language-server: $format.enable=false
-
+---
stages:
- linters
- checkout
diff --git a/.yamllint.yml b/.yamllint.yml
index 45efdb5..75da2b7 100644
--- a/.yamllint.yml
+++ b/.yamllint.yml
@@ -2,7 +2,4 @@
extends: default
rules:
- line-length:
- ignore:
- - .hadolint.yaml
- - .gitlab-ci.yml
+ line-length: disable
--
GitLab
From 080e3a2b73a89ae61400e84a6c0dddae538b09f0 Mon Sep 17 00:00:00 2001
From: Nicolas Richart <networms@gmail.ch>
Date: Fri, 14 Mar 2025 22:26:45 +0100
Subject: [PATCH 3/7] Linting pinot-noir
---
stacks/pinot-noir/concretizer_common.yaml | 11 +-
stacks/pinot-noir/config_common.yaml | 5 +-
stacks/pinot-noir/definitions_acc_cuda.yaml | 1 +
stacks/pinot-noir/definitions_empty.yaml | 13 +-
stacks/pinot-noir/definitions_stack.yaml | 8 +-
stacks/pinot-noir/modules_acc_cuda.yaml | 1 +
stacks/pinot-noir/modules_common.yaml | 57 +-
stacks/pinot-noir/modules_empty.yaml | 1 +
stacks/pinot-noir/modules_kuma-h100.yaml | 1 +
stacks/pinot-noir/modules_kuma-l40s.yaml | 1 +
stacks/pinot-noir/packages_acc_cuda.yaml | 97 ++--
stacks/pinot-noir/packages_acc_none.yaml | 3 +-
stacks/pinot-noir/packages_common.yaml | 14 +-
stacks/pinot-noir/packages_empty.yaml | 1 +
stacks/pinot-noir/packages_izar.yaml | 5 +-
stacks/pinot-noir/packages_kuma-h100.yaml | 29 +-
stacks/pinot-noir/packages_kuma-l40s.yaml | 29 +-
stacks/pinot-noir/packages_stack.yaml | 545 +++++++++++---------
stacks/pinot-noir/spack.yaml | 31 +-
stacks/pinot-noir/spack_aocc.yaml | 23 +-
stacks/pinot-noir/spack_nvhpc.yaml | 43 +-
stacks/pinot-noir/spack_oneapi.yaml | 45 +-
22 files changed, 539 insertions(+), 425 deletions(-)
diff --git a/stacks/pinot-noir/concretizer_common.yaml b/stacks/pinot-noir/concretizer_common.yaml
index cb79471..fa4713c 100644
--- a/stacks/pinot-noir/concretizer_common.yaml
+++ b/stacks/pinot-noir/concretizer_common.yaml
@@ -1,10 +1,11 @@
+---
concretizer:
reuse: false
- # roots: true
- # include:
- # - "%gcc@11.2.1"
- # from:
- # - type: local
+ # roots: true
+ # include:
+ # - "%gcc@11.2.1"
+ # from:
+ # - type: local
unify: false
duplicates:
strategy: minimal
diff --git a/stacks/pinot-noir/config_common.yaml b/stacks/pinot-noir/config_common.yaml
index bac71f0..8e3ccaf 100644
--- a/stacks/pinot-noir/config_common.yaml
+++ b/stacks/pinot-noir/config_common.yaml
@@ -1,9 +1,10 @@
+---
config:
-# ccache: true
+ # ccache: true
install_missing_compilers: false
install_tree:
- padded_length: False
+ padded_length: false
build_stage:
- $tempdir/$user/spack-stage
diff --git a/stacks/pinot-noir/definitions_acc_cuda.yaml b/stacks/pinot-noir/definitions_acc_cuda.yaml
index d417ff1..a7f4dcf 100644
--- a/stacks/pinot-noir/definitions_acc_cuda.yaml
+++ b/stacks/pinot-noir/definitions_acc_cuda.yaml
@@ -1,3 +1,4 @@
+---
definitions:
- cuda_system_codes: []
diff --git a/stacks/pinot-noir/definitions_empty.yaml b/stacks/pinot-noir/definitions_empty.yaml
index 5449b15..bee4928 100644
--- a/stacks/pinot-noir/definitions_empty.yaml
+++ b/stacks/pinot-noir/definitions_empty.yaml
@@ -1,9 +1,10 @@
+---
definitions:
- # -------------------------------------------------------------------------
- # Empty to specialize in environments
- # -------------------------------------------------------------------------
- - cuda_system_codes: []
+ # -------------------------------------------------------------------------
+ # Empty to specialize in environments
+ # -------------------------------------------------------------------------
+ - cuda_system_codes: []
- - cuda_serial_codes: []
+ - cuda_serial_codes: []
- - cuda_mpi_codes: []
+ - cuda_mpi_codes: []
diff --git a/stacks/pinot-noir/definitions_stack.yaml b/stacks/pinot-noir/definitions_stack.yaml
index 765cfa9..d94c80f 100644
--- a/stacks/pinot-noir/definitions_stack.yaml
+++ b/stacks/pinot-noir/definitions_stack.yaml
@@ -1,3 +1,4 @@
+---
definitions:
# -------------------------------------------------------------------------
# Core packages
@@ -27,7 +28,7 @@ definitions:
- lmod
- mpfr
- neovim
- #- ninja
+ # - ninja
- papi
- parallel
- picard
@@ -167,7 +168,7 @@ definitions:
- python_blas_codes:
- boost ~~mpi
- #- gmsh ~~mpi +hdf5 +cgns +eigen ~opencascade +openmp ~fltk ~med
+ # - gmsh ~~mpi +hdf5 +cgns +eigen ~opencascade +openmp ~fltk ~med
- iq-tree
- py-biopython
- py-keras-preprocessing
@@ -191,7 +192,7 @@ definitions:
- py-pymol ^hdf5~mpi
- py-scikit-learn
- py-scipy
- #- py-statsmodels
+ # - py-statsmodels
- py-theano
- r
@@ -221,7 +222,6 @@ definitions:
- scorep
- nvhpc_mpi_codes: []
- #- boost ++mpi
- mpi_python_codes:
- py-mpi4py
diff --git a/stacks/pinot-noir/modules_acc_cuda.yaml b/stacks/pinot-noir/modules_acc_cuda.yaml
index d098e12..baf4515 100644
--- a/stacks/pinot-noir/modules_acc_cuda.yaml
+++ b/stacks/pinot-noir/modules_acc_cuda.yaml
@@ -1,3 +1,4 @@
+---
modules:
default:
lmod:
diff --git a/stacks/pinot-noir/modules_common.yaml b/stacks/pinot-noir/modules_common.yaml
index 135e4d5..f5d5454 100644
--- a/stacks/pinot-noir/modules_common.yaml
+++ b/stacks/pinot-noir/modules_common.yaml
@@ -1,3 +1,4 @@
+---
modules:
prefix_inspections:
./lib:
@@ -17,20 +18,20 @@ modules:
set:
"{name}_ROOT": "{prefix}"
suffixes:
- '+mpi': mpi
- '+openmp': openmp
- 'threads=openmp': openmp
- '^fftw+openmp': openmp
- 'hdf5=parallel': h5
- '+cuda': cuda
- '+double-gpu': double-gpu
- '+plumed': plumed
- '+unwind': unwind
- '+debug': dbg
- '+ilp64': int64
- '+int64': int64
- 'version_suffix=jl': julia
- 'interface=tcl': tcl
+ "+mpi": mpi
+ "+openmp": openmp
+ "threads=openmp": openmp
+ "^fftw+openmp": openmp
+ "hdf5=parallel": h5
+ "+cuda": cuda
+ "+double-gpu": double-gpu
+ "+plumed": plumed
+ "+unwind": unwind
+ "+debug": dbg
+ "+ilp64": int64
+ "+int64": int64
+ "version_suffix=jl": julia
+ "interface=tcl": tcl
autoload: run
hide_implicits: true
@@ -47,23 +48,23 @@ modules:
FC: "{prefix}/bin/gfortran"
F90: "{prefix}/bin/gfortran"
-# cuda:
-# environment:
-# append_path:
-# JULIA_LOAD_PATH: ":/ssoft/spack/external/julia/syrah.v1/cuda"
+ # cuda:
+ # environment:
+ # append_path:
+ # JULIA_LOAD_PATH: ":/ssoft/spack/external/julia/syrah.v1/cuda"
openmpi:
environment:
set:
SLURM_MPI_TYPE: pmix
- OMPI_MCA_btl_openib_warn_default_gid_prefix: '0'
-# append_path:
-# JULIA_LOAD_PATH: ":/ssoft/spack/external/julia/syrah.v1/mpi"
+ OMPI_MCA_btl_openib_warn_default_gid_prefix: "0"
+ # append_path:
+ # JULIA_LOAD_PATH: ":/ssoft/spack/external/julia/syrah.v1/mpi"
openblas threads=pthreads:
environment:
set:
- OPENBLAS_NUM_THREADS: '1'
+ OPENBLAS_NUM_THREADS: "1"
hdf5~mpi+cxx:
environment:
@@ -82,7 +83,7 @@ modules:
environment:
set:
I_MPI_PMI_LIBRARY: /usr/lib64/libpmi2.so
- I_MPI_EXTRA_FILESYSTEM: '0'
+ I_MPI_EXTRA_FILESYSTEM: "0"
SLURM_MPI_TYPE: pmi2
metis:
@@ -97,7 +98,7 @@ modules:
set:
PLUMED_KERNEL: "{prefix}/lib/libplumedKernel.so"
unset:
- - PLUMED_ROOT
+ - PLUMED_ROOT
quantum-espresso:
suffixes:
@@ -105,8 +106,8 @@ modules:
scons:
suffixes:
- '^python@:2.99': py2
- '^python@3:': py3
+ "^python@:2.99": py2
+ "^python@3:": py3
ucx:
environment:
@@ -127,11 +128,11 @@ modules:
fdtd:
environment:
set:
- ANSYSLMD_LICENSE_FILE: '1055@scitas-lic-srv.epfl.ch'
+ ANSYSLMD_LICENSE_FILE: "1055@scitas-lic-srv.epfl.ch"
SLURM_MPI_TYPE: pmi2
gaussian:
- template: modules/group_restricted.lua
+ template: modules/group_restricted.lua
spark:
environment:
diff --git a/stacks/pinot-noir/modules_empty.yaml b/stacks/pinot-noir/modules_empty.yaml
index 21d0544..cabc79d 100644
--- a/stacks/pinot-noir/modules_empty.yaml
+++ b/stacks/pinot-noir/modules_empty.yaml
@@ -1,3 +1,4 @@
+---
modules:
default:
lmod: {}
diff --git a/stacks/pinot-noir/modules_kuma-h100.yaml b/stacks/pinot-noir/modules_kuma-h100.yaml
index 8ddd771..4e874cb 100644
--- a/stacks/pinot-noir/modules_kuma-h100.yaml
+++ b/stacks/pinot-noir/modules_kuma-h100.yaml
@@ -1,3 +1,4 @@
+---
modules:
default:
lmod:
diff --git a/stacks/pinot-noir/modules_kuma-l40s.yaml b/stacks/pinot-noir/modules_kuma-l40s.yaml
index 10a02d6..c6ca875 100644
--- a/stacks/pinot-noir/modules_kuma-l40s.yaml
+++ b/stacks/pinot-noir/modules_kuma-l40s.yaml
@@ -1,3 +1,4 @@
+---
modules:
default:
lmod:
diff --git a/stacks/pinot-noir/packages_acc_cuda.yaml b/stacks/pinot-noir/packages_acc_cuda.yaml
index f4eccc4..054a26b 100644
--- a/stacks/pinot-noir/packages_acc_cuda.yaml
+++ b/stacks/pinot-noir/packages_acc_cuda.yaml
@@ -1,108 +1,117 @@
+---
packages:
all:
require:
- "~rocm"
- spec: cuda_arch={cuda_arch}
- when: '+cuda'
+ when: "+cuda"
- - spec: '+cuda'
- when: '%gcc'
+ - spec: "+cuda"
+ when: "%gcc"
- - spec: '+cuda'
- when: '%nvhpc'
+ - spec: "+cuda"
+ when: "%nvhpc"
# ---------------------------------------------------------------------------
amber:
- require: ['+nccl']
+ require: ["+nccl"]
charmpp:
- require: ['+smp', '~cuda']
+ require: ["+smp", "~cuda"]
cuda:
prefer:
- - spec: "^gcc-runtime@{gcc_version} target={target}"
- when: "%gcc@{gcc_version}"
- - spec: "%gcc@{gcc_version} target={target}"
- when: "%gcc"
- - spec: "target={target}"
- when: "%nvhpc"
+ - spec: "^gcc-runtime@{gcc_version} target={target}"
+ when: "%gcc@{gcc_version}"
+ - spec: "%gcc@{gcc_version} target={target}"
+ when: "%gcc"
+ - spec: "target={target}"
+ when: "%nvhpc"
require:
- - spec: '@12.4.1'
- when: '%gcc'
- - spec: '@12.5.1'
- when: '%nvhpc'
+ - spec: "@12.4.1"
+ when: "%gcc"
+ - spec: "@12.5.1"
+ when: "%nvhpc"
hypre:
- require: ['+cuda', 'cuda_arch={cuda_arch}', '+unified-memory']
+ require: ["+cuda", "cuda_arch={cuda_arch}", "+unified-memory"]
hwloc:
- require: ['+cuda', 'cuda_arch={cuda_arch}', '+nvml']
+ require: ["+cuda", "cuda_arch={cuda_arch}", "+nvml"]
kokkos:
- require: ['+cuda', '+cuda_lambda', 'cuda_arch={cuda_arch}', '+wrapper', '~openmptarget']
+ require:
+ [
+ "+cuda",
+ "+cuda_lambda",
+ "cuda_arch={cuda_arch}",
+ "+wrapper",
+ "~openmptarget",
+ ]
kokkos-kernels:
- require: ['+cuda', '+cublas', '+cusolver', '+cusparse', 'cuda_arch={cuda_arch}']
+ require:
+ ["+cuda", "+cublas", "+cusolver", "+cusparse", "cuda_arch={cuda_arch}"]
libxc:
- require: ['+cuda', 'cuda_arch={cuda_arch}']
+ require: ["+cuda", "cuda_arch={cuda_arch}"]
namd:
- require: ['+cuda', '+single_node_gpu', 'cuda_arch={cuda_arch}']
+ require: ["+cuda", "+single_node_gpu", "cuda_arch={cuda_arch}"]
nvshmem:
require:
- - spec: '+cuda cuda_arch={cuda_arch} +nccl +ucx +mpi'
- - spec: '+ibgda'
- when: '@3:'
+ - spec: "+cuda cuda_arch={cuda_arch} +nccl +ucx +mpi"
+ - spec: "+ibgda"
+ when: "@3:"
openmpi:
- require: ['+cuda', 'cuda_arch={cuda_arch}']
+ require: ["+cuda", "cuda_arch={cuda_arch}"]
papi:
- require: ['+nvml', '+infiniband', '+cuda']
+ require: ["+nvml", "+infiniband", "+cuda"]
paraview:
- require: ['~cuda']
+ require: ["~cuda"]
petsc:
- require: ['+cuda', 'cuda_arch={cuda_arch}']
+ require: ["+cuda", "cuda_arch={cuda_arch}"]
py-tensorflow:
require:
- - spec: '+cuda cuda_arch={cuda_arch} +nccl'
+ - spec: "+cuda cuda_arch={cuda_arch} +nccl"
py-torch:
require:
- - spec: '+cuda cuda_arch={cuda_arch} +nccl +cudnn'
+ - spec: "+cuda cuda_arch={cuda_arch} +nccl +cudnn"
python:
require:
- - spec: 'target={target}'
- when: '%gcc@{gcc_version}'
+ - spec: "target={target}"
+ when: "%gcc@{gcc_version}"
quantum-espresso:
require:
- - spec: '+cuda +mpigpu'
- when: '%nvhpc'
+ - spec: "+cuda +mpigpu"
+ when: "%nvhpc"
sirius:
- require: ['+cuda', 'cuda_arch={cuda_arch}']
+ require: ["+cuda", "cuda_arch={cuda_arch}"]
slepc:
- require: ['+cuda', 'cuda_arch={cuda_arch}']
+ require: ["+cuda", "cuda_arch={cuda_arch}"]
suite-sparse:
require:
- - spec: '+cuda'
- when: '@7.3.1'
- - spec: '~cuda'
- when: '@7.2.1'
+ - spec: "+cuda"
+ when: "@7.3.1"
+ - spec: "~cuda"
+ when: "@7.2.1"
ucc:
require:
- - spec: '+cuda cuda_arch={cuda_arch} +nccl'
+ - spec: "+cuda cuda_arch={cuda_arch} +nccl"
ucx:
- require: ['+gdrcopy', '+cuda', 'cuda_arch={cuda_arch}', '~rocm']
+ require: ["+gdrcopy", "+cuda", "cuda_arch={cuda_arch}", "~rocm"]
diff --git a/stacks/pinot-noir/packages_acc_none.yaml b/stacks/pinot-noir/packages_acc_none.yaml
index 0aa29d8..cb1f937 100644
--- a/stacks/pinot-noir/packages_acc_none.yaml
+++ b/stacks/pinot-noir/packages_acc_none.yaml
@@ -1,3 +1,4 @@
+---
packages:
all:
- require: ['~cuda', '~rocm']
+ require: ["~cuda", "~rocm"]
diff --git a/stacks/pinot-noir/packages_common.yaml b/stacks/pinot-noir/packages_common.yaml
index df8edbc..72bd4d6 100644
--- a/stacks/pinot-noir/packages_common.yaml
+++ b/stacks/pinot-noir/packages_common.yaml
@@ -1,3 +1,4 @@
+---
packages:
all:
compiler:
@@ -15,21 +16,20 @@ packages:
uuid: [libuuid]
zlib-api: [zlib-ng+compat]
-
glibc:
- prefer: ['%gcc@11.2.1']
+ prefer: ["%gcc@11.2.1"]
jpeg:
- require: ['libjpeg']
+ require: ["libjpeg"]
pkgconfig:
- require: ['pkgconf']
+ require: ["pkgconf"]
uuid:
- require: ['libuuid']
+ require: ["libuuid"]
zlib-api:
- require: ['zlib-ng']
+ require: ["zlib-ng"]
zlib-ng:
- require: ['+compat', 'build_system=autotools']
+ require: ["+compat", "build_system=autotools"]
diff --git a/stacks/pinot-noir/packages_empty.yaml b/stacks/pinot-noir/packages_empty.yaml
index c33c0b6..e45565d 100644
--- a/stacks/pinot-noir/packages_empty.yaml
+++ b/stacks/pinot-noir/packages_empty.yaml
@@ -1 +1,2 @@
+---
packages: {}
diff --git a/stacks/pinot-noir/packages_izar.yaml b/stacks/pinot-noir/packages_izar.yaml
index fdd4f0b..6386f84 100644
--- a/stacks/pinot-noir/packages_izar.yaml
+++ b/stacks/pinot-noir/packages_izar.yaml
@@ -1,6 +1,7 @@
+---
packages:
cp2k:
- require: ['+cuda', 'cuda_arch=70']
+ require: ["+cuda", "cuda_arch=70"]
dbcsr:
- require: ['+cuda', 'cuda_arch=70']
+ require: ["+cuda", "cuda_arch=70"]
diff --git a/stacks/pinot-noir/packages_kuma-h100.yaml b/stacks/pinot-noir/packages_kuma-h100.yaml
index 465a45a..4c98d47 100644
--- a/stacks/pinot-noir/packages_kuma-h100.yaml
+++ b/stacks/pinot-noir/packages_kuma-h100.yaml
@@ -1,15 +1,16 @@
+---
packages:
cp2k:
- require: ['+cuda', 'cuda_arch=90']
+ require: ["+cuda", "cuda_arch=90"]
dbcsr:
- require: ['+cuda', 'cuda_arch=90']
+ require: ["+cuda", "cuda_arch=90"]
openmpi:
- require: ['fabrics=hcoll']
+ require: ["fabrics=hcoll"]
ucx:
- require: ['+xpmem']
+ require: ["+xpmem"]
# ---------------------------------------------------------------------------
# Externals
@@ -17,29 +18,29 @@ packages:
hcoll:
buildable: false
externals:
- - spec: 'hcoll@4.8.3227'
- prefix: /opt/mellanox/hcoll
+ - spec: "hcoll@4.8.3227"
+ prefix: /opt/mellanox/hcoll
pmix:
buildable: false
externals:
- - spec: 'pmix@5.0.2'
- prefix: /usr
+ - spec: "pmix@5.0.2"
+ prefix: /usr
rdma-core:
buildable: false
externals:
- - spec: 'rdma-core@51.1'
- prefix: /usr
+ - spec: "rdma-core@51.1"
+ prefix: /usr
slurm:
buildable: false
externals:
- - spec: 'slurm@24-05-2-1'
- prefix: /usr
+ - spec: "slurm@24-05-2-1"
+ prefix: /usr
xpmem:
buildable: false
externals:
- - spec: 'xpmem@2.7.3'
- prefix: /usr
+ - spec: "xpmem@2.7.3"
+ prefix: /usr
diff --git a/stacks/pinot-noir/packages_kuma-l40s.yaml b/stacks/pinot-noir/packages_kuma-l40s.yaml
index 63ca5c9..1538702 100644
--- a/stacks/pinot-noir/packages_kuma-l40s.yaml
+++ b/stacks/pinot-noir/packages_kuma-l40s.yaml
@@ -1,16 +1,17 @@
+---
packages:
# ---------------------------------------------------------------------------
cp2k:
- require: ['~cuda']
+ require: ["~cuda"]
dbcsr:
- require: ['~cuda']
+ require: ["~cuda"]
openmpi:
- require: ['fabrics=hcoll']
+ require: ["fabrics=hcoll"]
ucx:
- require: ['+xpmem']
+ require: ["+xpmem"]
# ---------------------------------------------------------------------------
# Externals
@@ -18,29 +19,29 @@ packages:
hcoll:
buildable: false
externals:
- - spec: 'hcoll@4.8.3227'
- prefix: /opt/mellanox/hcoll
+ - spec: "hcoll@4.8.3227"
+ prefix: /opt/mellanox/hcoll
pmix:
buildable: false
externals:
- - spec: 'pmix@5.0.2'
- prefix: /usr
+ - spec: "pmix@5.0.2"
+ prefix: /usr
rdma-core:
buildable: false
externals:
- - spec: 'rdma-core@51.1'
- prefix: /usr
+ - spec: "rdma-core@51.1"
+ prefix: /usr
slurm:
buildable: false
externals:
- - spec: 'slurm@24-05-2-1'
- prefix: /usr
+ - spec: "slurm@24-05-2-1"
+ prefix: /usr
xpmem:
buildable: false
externals:
- - spec: 'xpmem@2.7.3'
- prefix: /usr
+ - spec: "xpmem@2.7.3"
+ prefix: /usr
diff --git a/stacks/pinot-noir/packages_stack.yaml b/stacks/pinot-noir/packages_stack.yaml
index 7fda048..a2b8d19 100644
--- a/stacks/pinot-noir/packages_stack.yaml
+++ b/stacks/pinot-noir/packages_stack.yaml
@@ -1,406 +1,472 @@
+---
packages:
all:
target: ["{target}"]
- prefer: ['target={target}']
+ prefer: ["target={target}"]
require:
- - spec: '+ipo'
- when: '%gcc'
+ - spec: "+ipo"
+ when: "%gcc"
# ----------------------------------------------------------------------------
# Requirements
# ----------------------------------------------------------------------------
adios2:
- require: ['+kokkos', '+mgard', '~zfp']
+ require: ["+kokkos", "+mgard", "~zfp"]
apr:
# https://issues.apache.org/jira/browse/SVN-4813
- require: ['@1.6.2']
+ require: ["@1.6.2"]
arpack-ng:
- prefer: ['+mpi']
+ prefer: ["+mpi"]
boost:
- prefer: ['~mpi']
+ prefer: ["~mpi"]
require:
- - 'cxxstd=14'
- - '+icu'
- - '+atomic'
- - '+chrono'
- - '+container'
- - '+date_time'
- - '+filesystem'
- - '+graph'
- - '+iostreams'
- - '~json'
- - '+locale'
- - '+log'
- - '+math'
- - '~pic'
- - '+program_options'
- - '+random'
- - '+regex'
- - '+serialization'
- - '+shared'
- - '+signals'
- - '~singlethreaded'
- - '~stacktrace'
- - '+system'
- - '~taggedlayout'
- - '+test'
- - '+thread'
- - '+timer'
- - '~type_erasure'
- - '~versionedlayout'
- - '+wave'
- - '+exception'
-
- - spec: '+python +numpy'
- when: '%gcc'
-
- - spec: '+python +numpy'
- when: '%oneapi'
-
- - spec: '+python ~numpy'
- when: '%nvhpc'
+ - "cxxstd=14"
+ - "+icu"
+ - "+atomic"
+ - "+chrono"
+ - "+container"
+ - "+date_time"
+ - "+filesystem"
+ - "+graph"
+ - "+iostreams"
+ - "~json"
+ - "+locale"
+ - "+log"
+ - "+math"
+ - "~pic"
+ - "+program_options"
+ - "+random"
+ - "+regex"
+ - "+serialization"
+ - "+shared"
+ - "+signals"
+ - "~singlethreaded"
+ - "~stacktrace"
+ - "+system"
+ - "~taggedlayout"
+ - "+test"
+ - "+thread"
+ - "+timer"
+ - "~type_erasure"
+ - "~versionedlayout"
+ - "+wave"
+ - "+exception"
+
+ - spec: "+python +numpy"
+ when: "%gcc"
+
+ - spec: "+python +numpy"
+ when: "%oneapi"
+
+ - spec: "+python ~numpy"
+ when: "%nvhpc"
cairo:
# ~X avoids a dependency to python (only prefer due to gtkplus)
- prefer: ['~X', '+svg']
- require: ['+fc', '+ft', '+pdf', '+gobject']
+ prefer: ["~X", "+svg"]
+ require: ["+fc", "+ft", "+pdf", "+gobject"]
cmake:
- prefer: ['~ncurses', '^curl tls=mbedtls']
+ prefer: ["~ncurses", "^curl tls=mbedtls"]
costa:
- require: ['~apps']
+ require: ["~apps"]
cp2k:
- require: ['~ipo']
+ require: ["~ipo"]
curl:
require:
- - '@8.7.1'
- - '+nghttp2'
- - '+libidn2'
- - '+libssh2'
- - one_of: ['tls=openssl', 'tls=mbedtls']
+ - "@8.7.1"
+ - "+nghttp2"
+ - "+libidn2"
+ - "+libssh2"
+ - one_of: ["tls=openssl", "tls=mbedtls"]
prefer:
- - 'tls=mbedtls'
+ - "tls=mbedtls"
dbcsr:
- require: ['smm=blas']
+ require: ["smm=blas"]
emacs:
- prefer: ['+tls', '+X', 'toolkit=athena']
+ prefer: ["+tls", "+X", "toolkit=athena"]
expat:
- prefer: ['libbsd']
+ prefer: ["libbsd"]
fenics-dolfinx:
- require: ['@0.8.0', '+slepc']
+ require: ["@0.8.0", "+slepc"]
ffmpeg:
- require: ['+libx264']
+ require: ["+libx264"]
fftw:
- prefer: ['+mpi', '+openmp']
+ prefer: ["+mpi", "+openmp"]
gettext:
- require: ['+libxml2', '+xz']
+ require: ["+libxml2", "+xz"]
gnuplot:
- require: ['@5.4.10', '+cairo']
+ require: ["@5.4.10", "+cairo"]
hdf5:
prefer:
- - spec: '@1.14.3'
+ - spec: "@1.14.3"
require:
- - spec: '+hl +threadsafe +szip +cxx +fortran'
- - spec: '+ipo'
- when: '%gcc'
- - spec: 'target={target}'
- when: '%gcc@{gcc_version}'
-
+ - spec: "+hl +threadsafe +szip +cxx +fortran"
+ - spec: "+ipo"
+ when: "%gcc"
+ - spec: "target={target}"
+ when: "%gcc@{gcc_version}"
hwloc:
require: ["+libxml2", "+pci"]
hypre:
prefer:
- - spec: '@2.31.0 ~magma'
+ - spec: "@2.31.0 ~magma"
intel-oneapi-mkl:
- prefer: ['~cluster']
+ prefer: ["~cluster"]
ior:
- require: ['+hdf5']
+ require: ["+hdf5"]
julia:
- require: ['@1.10.4']
+ require: ["@1.10.4"]
kokkos:
- require: ['+numactl', '+memkind', '+serial',
- '+openmp', '~openmptarget',
- '~threads', '~sycl',
- '+aggressive_vectorization', '@4.3.01']
+ require:
+ [
+ "+numactl",
+ "+memkind",
+ "+serial",
+ "+openmp",
+ "~openmptarget",
+ "~threads",
+ "~sycl",
+ "+aggressive_vectorization",
+ "@4.3.01",
+ ]
kokkos-kernels:
- require: ['@4.3.01', '+openmp', '~threads', '~ipo']
+ require: ["@4.3.01", "+openmp", "~threads", "~ipo"]
kokkos-nvcc-wrapper:
- prefer: ['@4.3.01']
+ prefer: ["@4.3.01"]
lammps:
- require: ['@20230802.3',
- 'build_type=Release', '+asphere', '+atc', '+body', '+class2',
- '+colloid', '+compress', '+coreshell', '+dipole', '+diffraction',
- '+extra-dump', '+granular', '+h5md', '+kspace', '+latboltz',
- '+lib', '+manybody', '+mc', '+misc', '+molecule',
- '+mpi', '+netcdf', '+peri', '~poems', '+python', '+qeq',
- '+replica ', '+rigid', '+shock', '+ml-snap', '+srd', '+voronoi',
- '+plumed', '+kokkos']
+ require:
+ [
+ "@20230802.3",
+ "build_type=Release",
+ "+asphere",
+ "+atc",
+ "+body",
+ "+class2",
+ "+colloid",
+ "+compress",
+ "+coreshell",
+ "+dipole",
+ "+diffraction",
+ "+extra-dump",
+ "+granular",
+ "+h5md",
+ "+kspace",
+ "+latboltz",
+ "+lib",
+ "+manybody",
+ "+mc",
+ "+misc",
+ "+molecule",
+ "+mpi",
+ "+netcdf",
+ "+peri",
+ "~poems",
+ "+python",
+ "+qeq",
+ "+replica ",
+ "+rigid",
+ "+shock",
+ "+ml-snap",
+ "+srd",
+ "+voronoi",
+ "+plumed",
+ "+kokkos",
+ ]
libfabric:
require:
- - spec: 'fabrics=mlx,mrail,psm3,verbs,udp,tcp,sockets,shm'
+ - spec: "fabrics=mlx,mrail,psm3,verbs,udp,tcp,sockets,shm"
libffi:
- require: ['@3.4.6']
+ require: ["@3.4.6"]
libpressio:
- require: ['~qoz', '~sz3']
+ require: ["~qoz", "~sz3"]
libssh2:
- prefer: ['crypto=openssl']
+ prefer: ["crypto=openssl"]
libtiff:
- require: ['build_system=cmake', '+pic', '+shared', '+jpeg']
+ require: ["build_system=cmake", "+pic", "+shared", "+jpeg"]
libtool:
- require: ['@2.4.6']
+ require: ["@2.4.6"]
libxc:
- require: ['build_system=cmake', '+shared']
+ require: ["build_system=cmake", "+shared"]
libxcb:
- require: ['+use_spack_interpreter']
+ require: ["+use_spack_interpreter"]
libxkbcommon:
- require: ['~wayland']
+ require: ["~wayland"]
libxml2:
# python depends on libxml2 this avoid cyclic dependency
- require: ['~python']
+ require: ["~python"]
likwid:
- require: ['@5.3.0']
+ require: ["@5.3.0"]
llvm:
# avoid compiler in lmod module
- prefer: ['~clang']
+ prefer: ["~clang"]
require:
- - spec: '~cuda'
- when: '@15:'
+ - spec: "~cuda"
+ when: "@15:"
m4:
- require: ['+sigsegv']
+ require: ["+sigsegv"]
magma:
# https://groups.google.com/a/icl.utk.edu/g/magma-user/c/l2XWTKmuBH0
- require: ['~ipo']
+ require: ["~ipo"]
mbedtls:
- prefer: ['@3.3.0', 'libs=shared,static']
+ prefer: ["@3.3.0", "libs=shared,static"]
memkind:
- require: ['%gcc']
+ require: ["%gcc"]
mesa:
- require: ['~llvm', '+opengl', '+opengles', '+osmesa']
+ require: ["~llvm", "+opengl", "+opengles", "+osmesa"]
meson:
- prefer: ['@1.2.1']
+ prefer: ["@1.2.1"]
metis:
- require: ['+real64']
+ require: ["+real64"]
mgard:
- require: ['~cuda']
+ require: ["~cuda"]
mpfr:
- require: ['@4.0.2']
+ require: ["@4.0.2"]
mumps:
- require: ['+openmp', '+metis', '+parmetis']
+ require: ["+openmp", "+metis", "+parmetis"]
namd:
- require: ['interface=tcl']
+ require: ["interface=tcl"]
netcdf-c:
- prefer: ['+mpi']
+ prefer: ["+mpi"]
opari2:
- require: ['%gcc']
+ require: ["%gcc"]
openblas:
- require: ['build_system=makefile']
- prefer: ['threads=openmp', 'symbol_suffix=none', '~ilp64']
+ require: ["build_system=makefile"]
+ prefer: ["threads=openmp", "symbol_suffix=none", "~ilp64"]
opencv:
- prefer: ['+vtk', '+python3']
+ prefer: ["+vtk", "+python3"]
openmpi:
- require: ['@5.0.3',
- 'fabrics=ofi,ucc,ucx,verbs',
- 'schedulers=slurm',
- '+romio', 'romio-filesystem=gpfs',
- '+internal-pmix', '~rsh',
- '~memchecker']
+ require:
+ [
+ "@5.0.3",
+ "fabrics=ofi,ucc,ucx,verbs",
+ "schedulers=slurm",
+ "+romio",
+ "romio-filesystem=gpfs",
+ "+internal-pmix",
+ "~rsh",
+ "~memchecker",
+ ]
openssl:
- prefer: ['+shared', 'certs=system', '~docs']
+ prefer: ["+shared", "certs=system", "~docs"]
otf2:
- require: ['%gcc']
+ require: ["%gcc"]
pango:
- prefer: ['~X']
+ prefer: ["~X"]
papi:
require:
- - '+powercap'
- - '+rapl'
- - any_of: ['%gcc', '%oneapi']
-
+ - "+powercap"
+ - "+rapl"
+ - any_of: ["%gcc", "%oneapi"]
petsc:
- require: ['+hypre', '+mumps', '+saws', '+scalapack', '+mpi', '+hdf5',
- '+suite-sparse', '+kokkos', '+openmp', '+superlu-dist']
+ require:
+ [
+ "+hypre",
+ "+mumps",
+ "+saws",
+ "+scalapack",
+ "+mpi",
+ "+hdf5",
+ "+suite-sparse",
+ "+kokkos",
+ "+openmp",
+ "+superlu-dist",
+ ]
python:
require:
- - '@3.11.7'
- - '+ssl'
- - '+tkinter'
- - '+crypt'
- - '+bz2'
- - '+pyexpat'
- - '+libxml2'
- - '+ctypes'
- - '+uuid'
- - '+sqlite3'
- - spec: '+optimizations'
- when: '%gcc'
+ - "@3.11.7"
+ - "+ssl"
+ - "+tkinter"
+ - "+crypt"
+ - "+bz2"
+ - "+pyexpat"
+ - "+libxml2"
+ - "+ctypes"
+ - "+uuid"
+ - "+sqlite3"
+ - spec: "+optimizations"
+ when: "%gcc"
prefer:
- - spec: '%gcc@{gcc_version}'
- when: '%gcc'
+ - spec: "%gcc@{gcc_version}"
+ when: "%gcc"
py-cppy:
- require: ['@1.2.1']
+ require: ["@1.2.1"]
py-cython:
require:
- - one_of: ['@0.29.36', '@3.0.8']
- prefer: ['@3.0.8']
+ - one_of: ["@0.29.36", "@3.0.8"]
+ prefer: ["@3.0.8"]
py-python-dateutil:
- require: ['@2.8.2']
+ require: ["@2.8.2"]
py-fenics-dolfinx:
- require: ['@0.8.0']
+ require: ["@0.8.0"]
py-horovod:
- require: ['frameworks=pytorch,keras,tensorflow', 'controllers=mpi', 'tensor_ops=nccl']
+ require:
+ [
+ "frameworks=pytorch,keras,tensorflow",
+ "controllers=mpi",
+ "tensor_ops=nccl",
+ ]
py-kiwisolver:
- require: ['@1.4.5']
+ require: ["@1.4.5"]
py-matplotlib:
- require: ['@3.3.4']
+ require: ["@3.3.4"]
py-mpmath:
- require: ['@1.2.1']
+ require: ["@1.2.1"]
py-numpy:
- prefer: ['@1.26.4']
+ prefer: ["@1.26.4"]
py-pandas:
- prefer: ['@2.2.1']
+ prefer: ["@2.2.1"]
py-pillow:
- prefer: ['@9.5.0', '+jpeg']
+ prefer: ["@9.5.0", "+jpeg"]
py-pysam:
- prefer: ['@0.22.1']
+ prefer: ["@0.22.1"]
# https://github.com/tensorflow/tensorflow/issues/63360#issuecomment-2142735122
# MKL support seams not maintained
py-tensorflow:
- require: ['+mpi', '~mkl']
+ require: ["+mpi", "~mkl"]
py-torch:
- require: ['@2.3.1', '+mpi', '~valgrind']
+ require: ["@2.3.1", "+mpi", "~valgrind"]
py-scipy:
- require: ['@1.13.0']
+ require: ["@1.13.0"]
py-setuptools:
- require: ['@63.4.3']
+ require: ["@63.4.3"]
py-virtualenv:
- require: ['@20.24.5']
+ require: ["@20.24.5"]
qt:
- require: ['@5.15.2']
+ require: ["@5.15.2"]
quantum-espresso:
- require: ['+mpi', '+openmp', '~gipaw', '+scalapack', '+libxc', '~ipo']
- prefer: ['hdf5=parallel']
+ require: ["+mpi", "+openmp", "~gipaw", "+scalapack", "+libxc", "~ipo"]
+ prefer: ["hdf5=parallel"]
rust:
- require: ['+dev']
+ require: ["+dev"]
scotch:
- prefer: ['~mpi']
- require: ['build_system=cmake']
+ prefer: ["~mpi"]
+ require: ["build_system=cmake"]
sirius:
- prefer: ['+fortran', '~elpa', '+wannier90']
- require: ['+openmp']
+ prefer: ["+fortran", "~elpa", "+wannier90"]
+ require: ["+openmp"]
slepc:
require:
- - spec: '^arpack-ng +mpi'
+ - spec: "^arpack-ng +mpi"
spades:
- require: ['~ipo']
+ require: ["~ipo"]
suite-sparse:
require:
- - '+graphblas'
- - one_of: ['@7.3.1', '@7.2.1']
- prefer: ['@7.3.1']
+ - "+graphblas"
+ - one_of: ["@7.3.1", "@7.2.1"]
+ prefer: ["@7.3.1"]
superlu:
- require: ['@5.3.0']
+ require: ["@5.3.0"]
tk:
- require: ['+xft', '+xss']
+ require: ["+xft", "+xss"]
ucx:
- require: ['@1.17.0',
- '+rdmacm',
- '+rc', '+dc', '+ud',
- '+cma', '+dm',
- '+verbs', '+mlx5_dv', '+ib_hw_tm']
+ require:
+ [
+ "@1.17.0",
+ "+rdmacm",
+ "+rc",
+ "+dc",
+ "+ud",
+ "+cma",
+ "+dm",
+ "+verbs",
+ "+mlx5_dv",
+ "+ib_hw_tm",
+ ]
vtk:
require:
- - spec: '~python ++mpi +xdmf +ffmpeg'
+ - spec: "~python ++mpi +xdmf +ffmpeg"
xmlto:
- require: ['@0.0.29']
+ require: ["@0.0.29"]
# ----------------------------------------------------------------------------
# System dependencies
@@ -408,38 +474,38 @@ packages:
egl:
buildable: false
externals:
- - spec: 'egl@21.3.4'
- prefix: /usr
+ - spec: "egl@21.3.4"
+ prefix: /usr
ninja:
buildable: false
externals:
- - spec: 'ninja@1.10.2'
- prefix: /usr
+ - spec: "ninja@1.10.2"
+ prefix: /usr
opengl:
buildable: false
externals:
- - spec: 'opengl@4.6'
- prefix: /usr
+ - spec: "opengl@4.6"
+ prefix: /usr
pmix:
buildable: false
externals:
- - spec: 'pmix@5.0.1'
- prefix: /usr
+ - spec: "pmix@5.0.1"
+ prefix: /usr
rdma-core:
buildable: false
externals:
- - spec: 'rdma-core@47.1'
- prefix: /usr
+ - spec: "rdma-core@47.1"
+ prefix: /usr
slurm:
buildable: false
externals:
- - spec: 'slurm@23-11-7-1'
- prefix: /usr
+ - spec: "slurm@23-11-7-1"
+ prefix: /usr
# ----------------------------------------------------------------------------
# Externals
@@ -448,69 +514,82 @@ packages:
buildable: false
permissions: {read: group, group: abaqus-soft}
externals:
- - {spec: abaqus@2019, prefix: /ssoft/spack/external/abaqus/2019}
- - {spec: abaqus@2023, prefix: /ssoft/spack/external/abaqus/2023}
+ - {spec: abaqus@2019, prefix: /ssoft/spack/external/abaqus/2019}
+ - {spec: abaqus@2023, prefix: /ssoft/spack/external/abaqus/2023}
ansys:
buildable: false
externals:
- - {spec: ansys@2020R2, prefix: /ssoft/spack/external/ansys/2020R2/v202}
- - {spec: ansys@2022R1, prefix: /ssoft/spack/external/ansys/2022R1/v221}
- - {spec: ansys@2022R2, prefix: /ssoft/spack/external/ansys/2022R2/v222}
- - {spec: ansys@2024R1, prefix: /ssoft/spack/external/ansys/2024R1/v241}
- - {spec: ansys@2024R2, prefix: /ssoft/spack/external/ansys/2024R2/v242}
- - {spec: ansys@2025R1, prefix: /ssoft/spack/external/ansys/2025R1/v251}
+ - {spec: ansys@2020R2, prefix: /ssoft/spack/external/ansys/2020R2/v202}
+ - {spec: ansys@2022R1, prefix: /ssoft/spack/external/ansys/2022R1/v221}
+ - {spec: ansys@2022R2, prefix: /ssoft/spack/external/ansys/2022R2/v222}
+ - {spec: ansys@2024R1, prefix: /ssoft/spack/external/ansys/2024R1/v241}
+ - {spec: ansys@2024R2, prefix: /ssoft/spack/external/ansys/2024R2/v242}
+ - {spec: ansys@2025R1, prefix: /ssoft/spack/external/ansys/2025R1/v251}
cfdplusplus:
buildable: false
externals:
- - {spec: cfdplusplus@16.1, prefix: /ssoft/spack/external/CFD++/2016.05}
- - {spec: cfdplusplus@19.1, prefix: /ssoft/spack/external/CFD++/19.1}
+ - {spec: cfdplusplus@16.1, prefix: /ssoft/spack/external/CFD++/2016.05}
+ - {spec: cfdplusplus@19.1, prefix: /ssoft/spack/external/CFD++/19.1}
comsol:
buildable: false
permissions: {read: group, group: comsol-soft}
externals:
- - {spec: comsol@5.6, prefix: /ssoft/spack/external/comsol/5.6/comsol56/multiphysics/}
- - {spec: comsol@6.0, prefix: /ssoft/spack/external/comsol/6.0}
- - {spec: comsol@6.2, prefix: /ssoft/spack/external/comsol/6.2}
+ - spec: comsol@5.6,
+ prefix: /ssoft/spack/external/comsol/5.6/comsol56/multiphysics/
+ - {spec: comsol@6.0, prefix: /ssoft/spack/external/comsol/6.0}
+ - {spec: comsol@6.2, prefix: /ssoft/spack/external/comsol/6.2}
fdtd:
buildable: false
permissions: {read: group, group: ansys-soft}
externals:
- - {spec: fdtd@2020-R2-2387, prefix: /ssoft/spack/external/fdtd/8.24.2387}
- - {spec: fdtd@2020-R2.4-2502, prefix: /ssoft/spack/external/fdtd/2020-R2.4-2502}
- - {spec: fdtd@2021-R2.2-2806, prefix: /ssoft/spack/external/fdtd/2021-R2.2-2806}
- - {spec: fdtd@2022-R1.1-2963, prefix: /ssoft/spack/external/fdtd/2022-R1.1-2963}
- - {spec: fdtd@2024-R2.3-3941, prefix: /ssoft/spack/external/fdtd/2024-R2.3-3941}
+ - spec: fdtd@2020-R2-2387,
+ prefix: /ssoft/spack/external/fdtd/8.24.2387
+ - spec: fdtd@2020-R2.4-2502,
+ prefix: /ssoft/spack/external/fdtd/2020-R2.4-2502
+ - spec: fdtd@2021-R2.2-2806,
+ prefix: /ssoft/spack/external/fdtd/2021-R2.2-2806
+ - spec: fdtd@2022-R1.1-2963,
+ prefix: /ssoft/spack/external/fdtd/2022-R1.1-2963
+ - spec: fdtd@2024-R2.3-3941,
+ prefix: /ssoft/spack/external/fdtd/2024-R2.3-3941
gaussian:
buildable: false
externals:
- - {spec: gaussian@g16-A.03, prefix: /ssoft/spack/external/gaussian/g16-A.03/avx2}
- - {spec: gaussian@g16-C.01, prefix: /ssoft/spack/external/gaussian/g16-C.01/avx2}
+ - spec: gaussian@g16-A.03,
+ prefix: /ssoft/spack/external/gaussian/g16-A.03/avx2
+ - spec: gaussian@g16-C.01,
+ prefix: /ssoft/spack/external/gaussian/g16-C.01/avx2
maple:
buildable: false
externals:
- - {spec: maple@2017, prefix: /ssoft/spack/external/Maple/2017}
+ - {spec: maple@2017, prefix: /ssoft/spack/external/Maple/2017}
mathematica:
buildable: false
externals:
- - {spec: mathematica@11.1.1, prefix: /ssoft/spack/external/Mathematica/11.1.1}
- - {spec: mathematica@13.0, prefix: /ssoft/spack/external/Mathematica/13.0}
+ - spec: mathematica@11.1.1,
+ prefix: /ssoft/spack/external/Mathematica/11.1.1
+ - spec: mathematica@13.0,
+ prefix: /ssoft/spack/external/Mathematica/13.0
matlab:
buildable: false
externals:
- - {spec: matlab@R2018a, prefix: /ssoft/spack/external/MATLAB/R2018a}
- - {spec: matlab@R2019b, prefix: /ssoft/spack/external/MATLAB/R2019b}
- - {spec: matlab@R2024a, prefix: /ssoft/spack/external/MATLAB/R2024a}
- - {spec: matlab@R2024b, prefix: /ssoft/spack/external/MATLAB/R2024b}
+ - {spec: matlab@R2018a, prefix: /ssoft/spack/external/MATLAB/R2018a}
+ - {spec: matlab@R2019b, prefix: /ssoft/spack/external/MATLAB/R2019b}
+ - {spec: matlab@R2024a, prefix: /ssoft/spack/external/MATLAB/R2024a}
+ - {spec: matlab@R2024b, prefix: /ssoft/spack/external/MATLAB/R2024b}
molpro:
buildable: false
externals:
- - {spec: molpro@2022.3.0, prefix: /ssoft/spack/external/molpro/2022.3.0/mpi}
+ - spec: molpro@2022.3.0,
+ prefix: /ssoft/spack/external/molpro/2022.3.0/mpi
smr:
buildable: false
externals:
- - {spec: smr@2017.0, prefix: /ssoft/spack/external/SMR/2017.06}
+ - {spec: smr@2017.0, prefix: /ssoft/spack/external/SMR/2017.06}
totalview:
buildable: false
externals:
- - {spec: totalview@2017.2.11, prefix: /ssoft/spack/external/toolworks/totalview.2017.2.11}
- - {spec: totalview@2020.3.11, prefix: /ssoft/spack/external/toolworks/totalview.2020.3.11}
+ - spec: totalview@2017.2.11,
+ prefix: /ssoft/spack/external/toolworks/totalview.2017.2.11
+ - spec: totalview@2020.3.11,
+ prefix: /ssoft/spack/external/toolworks/totalview.2020.3.11
diff --git a/stacks/pinot-noir/spack.yaml b/stacks/pinot-noir/spack.yaml
index 61e31e1..d240606 100644
--- a/stacks/pinot-noir/spack.yaml
+++ b/stacks/pinot-noir/spack.yaml
@@ -1,36 +1,37 @@
+---
spack:
include:
- - compiler_definitions.yaml
+ - compiler_definitions.yaml
- - packages_stack.yaml
- - packages_accel.yaml
- - packages_env.yaml
+ - packages_stack.yaml
+ - packages_accel.yaml
+ - packages_env.yaml
- - modules_stack.yaml
- - modules_env.yaml
- - modules_accel.yaml
+ - modules_stack.yaml
+ - modules_env.yaml
+ - modules_accel.yaml
- - definitions_stack.yaml
- - definitions_accel.yaml
- - definitions_env.yaml
+ - definitions_stack.yaml
+ - definitions_accel.yaml
+ - definitions_env.yaml
modules:
default:
lmod:
- hierarchy: ['mpi']
+ hierarchy: ["mpi"]
packages:
blas:
- require: ['openblas']
+ require: ["openblas"]
lapack:
- require: ['openblas']
+ require: ["openblas"]
mpi:
- require: ['openmpi']
+ require: ["openmpi"]
scalapack:
- require: ['netlib-scalapack']
+ require: ["netlib-scalapack"]
definitions:
# -------------------------------------------------------------------------
diff --git a/stacks/pinot-noir/spack_aocc.yaml b/stacks/pinot-noir/spack_aocc.yaml
index b6e7276..c7693f9 100644
--- a/stacks/pinot-noir/spack_aocc.yaml
+++ b/stacks/pinot-noir/spack_aocc.yaml
@@ -1,18 +1,19 @@
+---
spack:
include:
- - compiler_definitions.yaml
+ - compiler_definitions.yaml
- - packages_stack.yaml
- - packages_accel.yaml
- - packages_env.yaml
+ - packages_stack.yaml
+ - packages_accel.yaml
+ - packages_env.yaml
- - modules_stack.yaml
- - modules_env.yaml
- - modules_accel.yaml
+ - modules_stack.yaml
+ - modules_env.yaml
+ - modules_accel.yaml
- - definitions_accel.yaml
- - definitions_env.yaml
- - definitions_stack.yaml
+ - definitions_accel.yaml
+ - definitions_env.yaml
+ - definitions_stack.yaml
modules:
default:
@@ -33,7 +34,7 @@ spack:
require: ['amdscalapack']
aocc:
- require: ['@4.2.0', 'license-agreed=true'
+ require: ['@4.2.0', 'license-agreed=true',
'%gcc@11.2.1', 'target=x86_64_v3']
icu4c:
diff --git a/stacks/pinot-noir/spack_nvhpc.yaml b/stacks/pinot-noir/spack_nvhpc.yaml
index 8f5e962..1be8d4b 100644
--- a/stacks/pinot-noir/spack_nvhpc.yaml
+++ b/stacks/pinot-noir/spack_nvhpc.yaml
@@ -1,18 +1,19 @@
+---
spack:
include:
- - compiler_definitions.yaml
+ - compiler_definitions.yaml
- - packages_stack.yaml
- - packages_accel.yaml
- - packages_env.yaml
+ - packages_stack.yaml
+ - packages_accel.yaml
+ - packages_env.yaml
- - modules_stack.yaml
- - modules_env.yaml
- - modules_accel.yaml
+ - modules_stack.yaml
+ - modules_env.yaml
+ - modules_accel.yaml
- - definitions_accel.yaml
- - definitions_env.yaml
- - definitions_stack.yaml
+ - definitions_accel.yaml
+ - definitions_env.yaml
+ - definitions_stack.yaml
modules:
default:
@@ -21,23 +22,31 @@ spack:
packages:
blas:
- require: ['nvhpc +blas']
+ require: ["nvhpc +blas"]
lapack:
- require: ['nvhpc +lapack']
+ require: ["nvhpc +lapack"]
mpi:
- require: ['nvhpc +mpi']
+ require: ["nvhpc +mpi"]
scalapack:
- require: ['netlib-scalapack']
+ require: ["netlib-scalapack"]
nvhpc:
- require: ['@24.7', '+mpi', '+blas', '+lapack', 'default_cuda=12.5',
- '%gcc@11.2.1', 'target=x86_64_v3']
+ require:
+ [
+ "@24.7",
+ "+mpi",
+ "+blas",
+ "+lapack",
+ "default_cuda=12.5",
+ "%gcc@11.2.1",
+ "target=x86_64_v3",
+ ]
icu4c:
- require: ['%gcc']
+ require: ["%gcc"]
definitions:
# -------------------------------------------------------------------------
diff --git a/stacks/pinot-noir/spack_oneapi.yaml b/stacks/pinot-noir/spack_oneapi.yaml
index 67f92a4..d1af93b 100644
--- a/stacks/pinot-noir/spack_oneapi.yaml
+++ b/stacks/pinot-noir/spack_oneapi.yaml
@@ -1,57 +1,58 @@
+---
spack:
include:
- - compiler_definitions.yaml
+ - compiler_definitions.yaml
- - packages_stack.yaml
- - packages_accel.yaml
- - packages_env.yaml
+ - packages_stack.yaml
+ - packages_accel.yaml
+ - packages_env.yaml
- - modules_stack.yaml
- - modules_env.yaml
- - modules_accel.yaml
+ - modules_stack.yaml
+ - modules_env.yaml
+ - modules_accel.yaml
- - definitions_accel.yaml
- - definitions_env.yaml
- - definitions_stack.yaml
+ - definitions_accel.yaml
+ - definitions_env.yaml
+ - definitions_stack.yaml
modules:
default:
lmod:
- hierarchy: ['mpi']
+ hierarchy: ["mpi"]
packages:
blas:
- require: ['intel-oneapi-mkl']
+ require: ["intel-oneapi-mkl"]
lapack:
- require: ['intel-oneapi-mkl']
+ require: ["intel-oneapi-mkl"]
mpi:
- require: ['intel-oneapi-mpi']
+ require: ["intel-oneapi-mpi"]
scalapack:
- require: ['intel-oneapi-mkl +cluster']
+ require: ["intel-oneapi-mkl +cluster"]
icu4c:
- require: ['%gcc']
+ require: ["%gcc"]
cuda:
require:
- - spec: '+allow-unsupported-compilers'
- when: '%oneapi'
+ - spec: "+allow-unsupported-compilers"
+ when: "%oneapi"
intel-oneapi-mkl:
require:
- - '%oneapi ^intel-oneapi-runtime target={target}'
+ - "%oneapi ^intel-oneapi-runtime target={target}"
intel-oneapi-mpi:
- require: ['%oneapi ^intel-oneapi-runtime target={target}']
+ require: ["%oneapi ^intel-oneapi-runtime target={target}"]
intel-oneapi-tbb:
- require: ['%oneapi ^intel-oneapi-runtime target={target}']
+ require: ["%oneapi ^intel-oneapi-runtime target={target}"]
intel-oneapi-runtime:
- require: ['%oneapi target={target} ^gcc-runtime target=x86_64_v3']
+ require: ["%oneapi target={target} ^gcc-runtime target=x86_64_v3"]
definitions:
# -------------------------------------------------------------------------
--
GitLab
From 12c4db3683bea3d33ceb18485ec93718d0f2bda8 Mon Sep 17 00:00:00 2001
From: Nicolas Richart <networms@gmail.ch>
Date: Fri, 14 Mar 2025 22:26:59 +0100
Subject: [PATCH 4/7] Changing linter for readability
---
.gitlab-ci.yml | 20 ++++++++++++++++----
1 file changed, 16 insertions(+), 4 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 4c97350..1a578b7 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -281,19 +281,31 @@ post_cleaning:
cq:hadolint:
<<: *code-climate
script:
- - hadolint --format codeclimate dockerfiles/**/Dockerfile | tee gl-codequality.json | jq -C .
+ # for gitlab
+ - hadolint --format codeclimate dockerfiles/**/Dockerfile > gl-codequality.json
+ # for the users
+ - hadolint --format tty dockerfiles/**/Dockerfile
cq:shellcheck:
<<: *code-climate
script:
+ # for gitlab
- |
git ls-files . \
| xargs -r -n1 file \
| awk -F: '/shell script/{print $1}' \
- | xargs -r -n1 shellcheck -f json \
- | tee -a gl-codequality.json | jq -C .
+ | xargs -r -n1 shellcheck -f json > gl-codequality.json
+ # for the users
+ - |
+ git ls-files . \
+ | xargs -r -n1 file \
+ | awk -F: '/shell script/{print $1}' \
+ | xargs -r -n1 shellcheck -f tty
cq:yamllint:
<<: *code-climate
script:
- - yamllint_codeclimate --standalone | tee gl-codequality.json | jq -C .
+ # for gitlab
+ - yamllint_codeclimate --standalone > gl-codequality.json
+ # for the users
+ - yamllint -f colored .
--
GitLab
From d7f908d4578b0a9a7e98a3423adb4120d5e7de23 Mon Sep 17 00:00:00 2001
From: Nicolas Richart <networms@gmail.ch>
Date: Fri, 14 Mar 2025 22:56:50 +0100
Subject: [PATCH 5/7] Linting dockerfiles
---
.hadolint.yaml | 6 +++++-
dockerfiles/deploy/Dockerfile | 2 +-
dockerfiles/rhel9-kuma/Dockerfile | 2 +-
3 files changed, 7 insertions(+), 3 deletions(-)
diff --git a/.hadolint.yaml b/.hadolint.yaml
index 440d70d..20a25c8 100644
--- a/.hadolint.yaml
+++ b/.hadolint.yaml
@@ -1,9 +1,13 @@
---
failure-threshold: "style" # name of threshold level (error | warning | info | style | ignore | none)
format: "codeclimate" # Output format (tty | json | checkstyle | codeclimate | gitlab_codeclimate | gnu | codacy)
-ignored: ["DL3041"] # list of rules
+ignored:
+ - "DL3008" # Pin versions in apt get install. Instead of `apt-get install <package>` use `apt-get install <package>=<version>`
+ - "DL3033" # Specify version with `yum install -y <package>-<version>`.
+ - "DL3041" # Specify version with dnf install -y <package>-<version>
no-color: false # true | false
strict-labels: true # true | false
trustedRegistries:
- "registry.hpc.epfl.ch" # registry or list of registries
+ - "registry.c4science.ch"
- "docker.io"
diff --git a/dockerfiles/deploy/Dockerfile b/dockerfiles/deploy/Dockerfile
index b7efc92..c048d7b 100644
--- a/dockerfiles/deploy/Dockerfile
+++ b/dockerfiles/deploy/Dockerfile
@@ -1,5 +1,5 @@
FROM debian:12-slim
-RUN apt -qq update && apt -qq -y install \
+RUN apt-get -qq update && apt-get -qq -y install --no-install-recommends \
squashfuse fuse3 rsync \
&& rm -rf /var/lib/apt/lists/*
diff --git a/dockerfiles/rhel9-kuma/Dockerfile b/dockerfiles/rhel9-kuma/Dockerfile
index 995f774..4548bd6 100644
--- a/dockerfiles/rhel9-kuma/Dockerfile
+++ b/dockerfiles/rhel9-kuma/Dockerfile
@@ -26,7 +26,7 @@ RUN yum install -y --enablerepo=$APPSTREAM_REPO \
python3 python3-pip python3-setuptools python3-boto3 \
git subversion mercurial \
ninja-build \
- libglvnd-devel
+ libglvnd-devel \
glibc-gconv-extra \
libatomic \
squashfs-tools \
--
GitLab
From 01a5cfeb8b990ad1e706042fd7ba484cd7ad43f1 Mon Sep 17 00:00:00 2001
From: Nicolas Richart <networms@gmail.ch>
Date: Fri, 14 Mar 2025 22:57:14 +0100
Subject: [PATCH 6/7] Helping debug concretization
---
ci/concretize.sh | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/ci/concretize.sh b/ci/concretize.sh
index 16a329f..d1aba76 100755
--- a/ci/concretize.sh
+++ b/ci/concretize.sh
@@ -49,6 +49,10 @@ do
-e ${full_environment} \
config blame | tee config-${full_environment}-${stack}.log
+ if [ -e ${SPACK_SYSTEM_CONFIG_PATH}/spack.lock ]; then
+ cp ${SPACK_SYSTEM_CONFIG_PATH}/spack.lock spack-${full_environment}-${stack}-old.lock
+ fi
+
${STACK_LOCATION}/spack/bin/spack \
--color always \
-e ${full_environment} \
@@ -62,3 +66,19 @@ do
cp ${SPACK_SYSTEM_CONFIG_PATH}/spack.lock spack-${full_environment}-${stack}.lock
done
+
+curl -Ls https://github.com/josephburnett/jd/releases/download/v2.1.2/jd-amd64-linux -o jd
+chmod +x jd
+
+for name in ${compilers_names}
+do
+ if [ -e spack-${full_environment}-${stack}-old.lock ]; then
+ source ci/stack_env.sh ${name}
+ ./jd -set <(jq '.concrete_specs' spack-${full_environment}-${stack}-old.lock) <(jq '.concrete_specs' spack-${full_environment}-${stack}.lock) | egrep "^[+-]" | while read -r line
+ do
+ echo -n $line | sed 's/^\([+-]\).*/\1/'
+ echo -n " "
+ echo $line | sed 's/^[+-]//' | jq -r '"\(.name)@\(.version) %\(.compiler.name)@\(.compiler.version) arch=linux-\(.arch.platform_os)-\(if .arch.target|type == "string" then .arch.target else .arch.target.name end) -- \(.hash)"'
+ done
+ fi
+done
--
GitLab
From 196443339f2e2a29db6b039b1cf2fc717cd7f950 Mon Sep 17 00:00:00 2001
From: Nicolas Richart <networms@gmail.ch>
Date: Sat, 15 Mar 2025 00:01:48 +0100
Subject: [PATCH 7/7] more debug capabilities
---
ci/debug/spack_lock_info.sh | 44 ++++++++++++++++++++++++++++++-------
1 file changed, 36 insertions(+), 8 deletions(-)
diff --git a/ci/debug/spack_lock_info.sh b/ci/debug/spack_lock_info.sh
index da1df32..9b5e42e 100755
--- a/ci/debug/spack_lock_info.sh
+++ b/ci/debug/spack_lock_info.sh
@@ -69,15 +69,32 @@ get_name_dep(){
}
+get_all_dependent(){
+ jq --arg h "$1" -c '.concrete_specs
+ | to_entries
+ | .[]
+ | select(.value.dependencies | length != 0)
+ | select(.value.dependencies[] | select(.hash | match($h)))
+ | {
+ name: .value.name,
+ key: .key,
+ version: .value.version,
+ compiler: (.value.compiler | "\(.version)"),
+ target: (.value.arch.target | if type == "object" then .name else . end)
+ }' $2
+}
+
+
usage() {
echo "-h [hash]"
echo "-n [name]"
echo "-f [file]"
}
-OPTSTRING=":h:n:f:a"
+OPTSTRING=":h:n:f:a:d"
all=0
+dependent=0
hash=""
name=""
file=""
@@ -92,6 +109,9 @@ while getopts ${OPTSTRING} opt; do
n)
name=${OPTARG}
;;
+ d)
+ dependent=1
+ ;;
a)
all=1
;;
@@ -108,22 +128,30 @@ while getopts ${OPTSTRING} opt; do
esac
done
-if [ "x$file" == "x" ]
+if [ "x$file" = "x" ]
then
echo "No file specified"
usage
exit 1
fi
-echo "name ($name), hash ($hash), file($file), all($all)"
+#echo "name ($name), hash ($hash), file($file), all($all)"
-if [ "x$hash" != "x" ]
+if [ $dependent -eq 1 ]
then
- if [ $all -eq 1 ]
+ if [ "x$hash" != "x" ]
+ then
+ get_all_dependent $hash $file
+ fi
+else
+ if [ "x$hash" != "x" ]
then
- get_all_dep $hash $file
- else
- get_hash_dep $hash $file
+ if [ $all -eq 1 ]
+ then
+ get_all_dep $hash $file
+ else
+ get_hash_dep $hash $file
+ fi
fi
fi
--
GitLab