From 32b5d860b352a143def6b68f1b28244b8df2bf96 Mon Sep 17 00:00:00 2001 From: Antoine Hoffmann <antoine.hoffmann@epfl.ch> Date: Wed, 29 Mar 2023 12:22:29 +0200 Subject: [PATCH] cleaning --- testcases/cyclone_example/cyclone_example.txt | 4 - testcases/cyclone_example/fort_00.90 | 14 +-- testcases/cyclone_example/fort_01.90 | 92 ------------------- testcases/cyclone_example/fort_02.90 | 92 ------------------- testcases/cyclone_example/fort_03.90 | 92 ------------------- testcases/cyclone_example/gyacomo23_debug | 1 + testcases/cyclone_example/gyacomo23_dp | 1 + testcases/cyclone_example/gyacomo23_sp | 1 + testcases/cyclone_example/gyacomo_debug | 1 - 9 files changed, 10 insertions(+), 288 deletions(-) delete mode 100644 testcases/cyclone_example/cyclone_example.txt delete mode 100644 testcases/cyclone_example/fort_01.90 delete mode 100644 testcases/cyclone_example/fort_02.90 delete mode 100644 testcases/cyclone_example/fort_03.90 create mode 120000 testcases/cyclone_example/gyacomo23_debug create mode 120000 testcases/cyclone_example/gyacomo23_dp create mode 120000 testcases/cyclone_example/gyacomo23_sp delete mode 120000 testcases/cyclone_example/gyacomo_debug diff --git a/testcases/cyclone_example/cyclone_example.txt b/testcases/cyclone_example/cyclone_example.txt deleted file mode 100644 index b38bfef6..00000000 --- a/testcases/cyclone_example/cyclone_example.txt +++ /dev/null @@ -1,4 +0,0 @@ -This is a testcase reproducing the cyclone base case of Dimits 2000 -Adiabatic electrons, s-alpha geometry, gradlnN = 2.22, gradlnT = 6.96 -With a small P,J=4,2 polynomial basis, one should observe the secondary instability (KHI) at t~50R/cs. -The saturated heat flux should be located around Qx ~ 30, i.e. Qx/QGB ~ 2 which is close to Dimits results. diff --git a/testcases/cyclone_example/fort_00.90 b/testcases/cyclone_example/fort_00.90 index 44ccd9d7..dcbde60a 100644 --- a/testcases/cyclone_example/fort_00.90 +++ b/testcases/cyclone_example/fort_00.90 @@ -1,8 +1,8 @@ &BASIC nrun = 99999999 dt = 0.01 - tmax = 50 - maxruntime = 356400 + tmax = 500 + maxruntime = 72000 job2load = -1 / &GRID @@ -10,9 +10,9 @@ jmax = 2 Nx = 128 Lx = 120 - Ny = 48 + Ny = 64 Ly = 120 - Nz = 16 + Nz = 24 SG = .f. Nexc = 0 / @@ -31,11 +31,11 @@ shift_y= 0.0 / &OUTPUT_PAR - dtsave_0d = 0.1 + dtsave_0d = 1 dtsave_1d = -1 dtsave_2d = -1 - dtsave_3d = 1 - dtsave_5d = 10 + dtsave_3d = 5 + dtsave_5d = 20 write_doubleprecision = .f. write_gamma = .t. write_hf = .t. diff --git a/testcases/cyclone_example/fort_01.90 b/testcases/cyclone_example/fort_01.90 deleted file mode 100644 index 5d11c5ae..00000000 --- a/testcases/cyclone_example/fort_01.90 +++ /dev/null @@ -1,92 +0,0 @@ -&BASIC - nrun = 99999999 - dt = 0.01 - tmax = 75 - maxruntime = 356400 - job2load = 0 -/ -&GRID - pmax = 4 - jmax = 2 - Nx = 128 - Lx = 120 - Ny = 48 - Ly = 120 - Nz = 6!16 - SG = .f. - Nexc = 0 -/ -&GEOMETRY - geom = 's-alpha' - q0 = 1.4 - shear = 0.8 - eps = 0.18 - kappa = 1.0 - s_kappa= 0.0 - delta = 0.0 - s_delta= 0.0 - zeta = 0.0 - s_zeta = 0.0 - parallel_bc = 'dirichlet' - shift_y= 0.0 -/ -&OUTPUT_PAR - dtsave_0d = 0.1 - dtsave_1d = -1 - dtsave_2d = -1 - dtsave_3d = 1 - dtsave_5d = 10 - write_doubleprecision = .f. - write_gamma = .t. - write_hf = .t. - write_phi = .t. - write_Na00 = .t. - write_Napj = .t. - write_dens = .t. - write_fvel = .t. - write_temp = .t. -/ -&MODEL_PAR - ! Collisionality - CLOS = 0 - NL_CLOS = 0 - LINEARITY = 'nonlinear' - Na = 1 ! number of species - mu_x = 1.0 - mu_y = 1.0 - N_HD = 4 - mu_z = 2.0 - HYP_V = 'hypcoll' - mu_p = 0.0 - mu_j = 0.0 - nu = 0.001 - beta = 0.0 - ADIAB_E = .t. - tau_e = 1.0 -/ -&SPECIES - ! ions - name_ = 'ions' - tau_ = 1.0 - sigma_= 1.0 - q_ = 1.0 - k_N_ = 2.22 - k_T_ = 6.96 -/ - -&COLLISION_PAR - collision_model = 'DG' !DG/SG/PA/LD (dougherty, sugama, pitch angle, landau) - GK_CO = .f. - INTERSPECIES = .true. - mat_file = 'gk_sugama_P_20_J_10_N_150_kpm_8.0.h5' -/ -&INITIAL_CON - INIT_OPT = 'blob' - ACT_ON_MODES = 'donothing' - init_background = 0.0 - init_noiselvl = 0.005 - iseed = 42 -/ -&TIME_INTEGRATION_PAR - numerical_scheme = 'RK4' -/ diff --git a/testcases/cyclone_example/fort_02.90 b/testcases/cyclone_example/fort_02.90 deleted file mode 100644 index 71f6ce37..00000000 --- a/testcases/cyclone_example/fort_02.90 +++ /dev/null @@ -1,92 +0,0 @@ -&BASIC - nrun = 10000000 - dt = 0.01 - tmax = 150 - maxruntime = 356400 - job2load = 1 -/ -&GRID - pmax = 4 - jmax = 2 - Nx = 128 - Lx = 120 - Ny = 48 - Ly = 120 - Nz = 16 - SG = .f. - Nexc = 0 -/ -&GEOMETRY - geom = 's-alpha' - q0 = 1.4 - shear = 0.8 - eps = 0.18 - kappa = 1.0 - s_kappa= 0.0 - delta = 0.0 - s_delta= 0.0 - zeta = 0.0 - s_zeta = 0.0 - parallel_bc = 'dirichlet' - shift_y= 0.0 -/ -&OUTPUT_PAR - dtsave_0d = 1 - dtsave_1d = -1 - dtsave_2d = -1 - dtsave_3d = 1 - dtsave_5d = 10 - write_doubleprecision = .f. - write_gamma = .t. - write_hf = .t. - write_phi = .t. - write_Na00 = .t. - write_Napj = .t. - write_dens = .t. - write_fvel = .t. - write_temp = .t. -/ -&MODEL_PAR - ! Collisionality - CLOS = 0 - NL_CLOS = 0 - LINEARITY = 'nonlinear' - Na = 1 ! number of species - mu_x = 1.0 - mu_y = 1.0 - N_HD = 4 - mu_z = 2.0 - HYP_V = 'hypcoll' - mu_p = 0.0 - mu_j = 0.0 - nu = 0.001 - beta = 0.0 - ADIAB_E = .t. - tau_e = 1.0 -/ -&SPECIES - ! ions - name_ = 'ions' - tau_ = 1.0 - sigma_= 1.0 - q_ = 1.0 - k_N_ = 2.22 - k_T_ = 6.96 -/ - -&COLLISION_PAR - collision_model = 'DG' !DG/SG/PA/LD (dougherty, sugama, pitch angle, landau) - GK_CO = .f. - INTERSPECIES = .true. - mat_file = 'gk_sugama_P_20_J_10_N_150_kpm_8.0.h5' -/ -&INITIAL_CON - INIT_OPT = 'blob' - ACT_ON_MODES = 'donothing' - init_background = 0.1 - init_noiselvl = 0.00 - iseed = 42 -/ -&TIME_INTEGRATION_PAR - numerical_scheme = 'RK4' -/ diff --git a/testcases/cyclone_example/fort_03.90 b/testcases/cyclone_example/fort_03.90 deleted file mode 100644 index 522faa1b..00000000 --- a/testcases/cyclone_example/fort_03.90 +++ /dev/null @@ -1,92 +0,0 @@ -&BASIC - nrun = 10000000 - dt = 0.01 - tmax = 155 - maxruntime = 356400 - job2load = 2 -/ -&GRID - pmax = 4 - jmax = 2 - Nx = 128 - Lx = 120 - Ny = 48 - Ly = 120 - Nz = 16 - SG = .f. - Nexc = 0 -/ -&GEOMETRY - geom = 's-alpha' - q0 = 1.4 - shear = 0.8 - eps = 0.18 - kappa = 1.0 - s_kappa= 0.0 - delta = 0.0 - s_delta= 0.0 - zeta = 0.0 - s_zeta = 0.0 - parallel_bc = 'dirichlet' - shift_y= 0.0 -/ -&OUTPUT_PAR - dtsave_0d = 0.01 - dtsave_1d = -1 - dtsave_2d = -1 - dtsave_3d = 1 - dtsave_5d = 10 - write_doubleprecision = .f. - write_gamma = .t. - write_hf = .t. - write_phi = .t. - write_Na00 = .t. - write_Napj = .t. - write_dens = .t. - write_fvel = .t. - write_temp = .t. -/ -&MODEL_PAR - ! Collisionality - CLOS = 0 - NL_CLOS = 0 - LINEARITY = 'nonlinear' - Na = 1 ! number of species - mu_x = 1.0 - mu_y = 1.0 - N_HD = 4 - mu_z = 2.0 - HYP_V = 'hypcoll' - mu_p = 0.0 - mu_j = 0.0 - nu = 0.001 - beta = 0.0 - ADIAB_E = .t. - tau_e = 1.0 -/ -&SPECIES - ! ions - name_ = 'ions' - tau_ = 1.0 - sigma_= 1.0 - q_ = 1.0 - k_N_ = 2.22 - k_T_ = 6.96 -/ - -&COLLISION_PAR - collision_model = 'DG' !DG/SG/PA/LD (dougherty, sugama, pitch angle, landau) - GK_CO = .f. - INTERSPECIES = .true. - mat_file = 'gk_sugama_P_20_J_10_N_150_kpm_8.0.h5' -/ -&INITIAL_CON - INIT_OPT = 'blob' - ACT_ON_MODES = 'donothing' - init_background = 0.1 - init_noiselvl = 0.00 - iseed = 42 -/ -&TIME_INTEGRATION_PAR - numerical_scheme = 'RK4' -/ diff --git a/testcases/cyclone_example/gyacomo23_debug b/testcases/cyclone_example/gyacomo23_debug new file mode 120000 index 00000000..dcb6f58d --- /dev/null +++ b/testcases/cyclone_example/gyacomo23_debug @@ -0,0 +1 @@ +../../bin/gyacomo23_debug \ No newline at end of file diff --git a/testcases/cyclone_example/gyacomo23_dp b/testcases/cyclone_example/gyacomo23_dp new file mode 120000 index 00000000..f11ab935 --- /dev/null +++ b/testcases/cyclone_example/gyacomo23_dp @@ -0,0 +1 @@ +../../bin/gyacomo23_dp \ No newline at end of file diff --git a/testcases/cyclone_example/gyacomo23_sp b/testcases/cyclone_example/gyacomo23_sp new file mode 120000 index 00000000..d3982f65 --- /dev/null +++ b/testcases/cyclone_example/gyacomo23_sp @@ -0,0 +1 @@ +../../bin/gyacomo23_sp \ No newline at end of file diff --git a/testcases/cyclone_example/gyacomo_debug b/testcases/cyclone_example/gyacomo_debug deleted file mode 120000 index 363e139a..00000000 --- a/testcases/cyclone_example/gyacomo_debug +++ /dev/null @@ -1 +0,0 @@ -../../bin/gyacomo_debug \ No newline at end of file -- GitLab