diff --git a/matlab/AUG/CEZ_CMZ_fit.m b/matlab/AUG/CEZ_CMZ_fit.m
index 69e4ec5c552df7110a4705def2b18399a21259bb..9adb62c28c44f959695f61e2e5aff55d405c6622 100644
--- a/matlab/AUG/CEZ_CMZ_fit.m
+++ b/matlab/AUG/CEZ_CMZ_fit.m
@@ -81,7 +81,7 @@ for i=1:length(ij)
it_cxrs = find(cxrs.t>=t1(i) & cxrs.t<t2(i));
it_cmz = find(cmz.t>=t1(i) & cmz.t<t2(i));
% construct 1D array with data from both cxrs, cmz
- rhotor_data_tofit = [];
+ rhotor_data_tofit = [];
tidata_tofit = [];
vrotdata_tofit = [];
tierr_tofit = [];
@@ -90,11 +90,11 @@ for i=1:length(ij)
for it=1:length(it_cxrs)
idata = find(cxrs.ti.data(:,it_cxrs(it))>0 & cxrs.rhotornorm(:,it_cxrs(it))<1.01);
if length(idata)>0
- rhotor_data_tofit(end+1:end+length(idata)) = cxrs.rhotornorm(idata,it_cxrs(it));
- tidata_tofit(end+1:end+length(idata)) = cxrs.ti.data(idata,it_cxrs(it));
- vrotdata_tofit(end+1:end+length(idata)) = cxrs.vrot.data(idata,it_cxrs(it));
- tierr_tofit(end+1:end+length(idata)) = cxrs.ti.error_bar(idata,it_cxrs(it))./ticoeff_err_cxrs;
- vroterr_tofit(end+1:end+length(idata)) = cxrs.vrot.error_bar(idata,it_cxrs(it))./vrotcoeff_err_cxrs;
+ rhotor_data_tofit(end+1:end+length(idata)) = cxrs.rhotornorm(idata,it_cxrs(it));
+ tidata_tofit(end+1:end+length(idata)) = cxrs.ti.data(idata,it_cxrs(it));
+ vrotdata_tofit(end+1:end+length(idata)) = cxrs.vrot.data(idata,it_cxrs(it));
+ tierr_tofit(end+1:end+length(idata)) = cxrs.ti.error_bar(idata,it_cxrs(it))./ticoeff_err_cxrs;
+ vroterr_tofit(end+1:end+length(idata)) = cxrs.vrot.error_bar(idata,it_cxrs(it))./vrotcoeff_err_cxrs;
end
end
end
@@ -102,11 +102,11 @@ for i=1:length(ij)
for it=1:length(it_cmz)
idata = find(cmz.ti.data(:,it_cmz(it))>0 & cmz.rhotornorm(:,it_cmz(it))<1.01);
if length(idata)>0
- rhotor_data_tofit(end+1:end+length(idata)) = cmz.rhotornorm(idata,it_cmz(it));
- tidata_tofit(end+1:end+length(idata)) = cmz.ti.data(idata,it_cmz(it));
- vrotdata_tofit(end+1:end+length(idata)) = cmz.vrot.data(idata,it_cmz(it));
- tierr_tofit(end+1:end+length(idata)) = cmz.ti.error_bar(idata,it_cmz(it))./ticoeff_err_cmz;
- vroterr_tofit(end+1:end+length(idata)) = cmz.vrot.error_bar(idata,it_cmz(it))./vrotcoeff_err_cmz;
+ rhotor_data_tofit(end+1:end+length(idata)) = cmz.rhotornorm(idata,it_cmz(it));
+ tidata_tofit(end+1:end+length(idata)) = cmz.ti.data(idata,it_cmz(it));
+ vrotdata_tofit(end+1:end+length(idata)) = cmz.vrot.data(idata,it_cmz(it));
+ tierr_tofit(end+1:end+length(idata)) = cmz.ti.error_bar(idata,it_cmz(it))./ticoeff_err_cmz;
+ vroterr_tofit(end+1:end+length(idata)) = cmz.vrot.error_bar(idata,it_cmz(it))./vrotcoeff_err_cmz;
end
end
rhotor_data_tofit_cmz = cmz.rhotornorm(:,it_cmz);
@@ -166,4 +166,3 @@ cez_cmz_fit.vrotcoeff_err_cmz = vrotcoeff_err_cmz;
cez_cmz_data.shot = shot;
eval(['save ' filename_withfits ' cez_cmz_fit cez_cmz_data'])
-
diff --git a/matlab/AUG/aug_help_parameters.m b/matlab/AUG/aug_help_parameters.m
index f936f614c00a1cd1f7140e13e5dc07c17e87d208..8f7f54a9122cdee58e47d2a0eec1abc060b41766 100644
--- a/matlab/AUG/aug_help_parameters.m
+++ b/matlab/AUG/aug_help_parameters.m
@@ -5,22 +5,22 @@ function help_struct = aug_help_parameters(parameter_list)
%
% return the whole help structure if parameter_list empty or not provided
%
-% do:
+% do:
% help_struct = aug_help_parameters(fieldnames(gdat_data.gdat_params));
-%
+%
% to get relevant help description
%
% Defaults
help_struct_all = struct(...
- 'data_request', ['automatically filled in by gdat, name of request used in gdat call.' char(10) ...
- 'contains current list of keywords if gdat called with no arguments: aa=gdat;' char(10) ...
- 'Note shot value should not be in params so params can be used to load same data from another shot'] ...
- ,'machine', 'machine name like ''TCV'', ''AUG'', case insensitive' ...
- ,'doplot', '0 (default), if 1 calls gdat_plot for a new figure, -1 plot over current figure with hold all, see gdat_plot for details' ...
- ,'liuqe','liuqe version 1 (default), 2, 3 for LIUQE1, 2, 3 resp. or -1 for model values' ...
- ,'nverbose','1 (default) displays warnings, 0: only errors, >=3: displays all extra information' ...
- );
+ 'data_request', ['automatically filled in by gdat, name of request used in gdat call.' char(10) ...
+ 'contains current list of keywords if gdat called with no arguments: aa=gdat;' char(10) ...
+ 'Note shot value should not be in params so params can be used to load same data from another shot'] ...
+ ,'machine', 'machine name like ''TCV'', ''AUG'', case insensitive' ...
+ ,'doplot', '0 (default), if 1 calls gdat_plot for a new figure, -1 plot over current figure with hold all, see gdat_plot for details' ...
+ ,'liuqe','liuqe version 1 (default), 2, 3 for LIUQE1, 2, 3 resp. or -1 for model values' ...
+ ,'nverbose','1 (default) displays warnings, 0: only errors, >=3: displays all extra information' ...
+ );
% AUG related
% $$$ help_struct_all.cxrs_plot = '0 (default) no plots, 1 get plots from CXRS_get_profiles see ''help CXRS_get_profiles'' for k_plot values';
@@ -31,7 +31,7 @@ help_struct_all.extra_arg_sf2sig = 'extra parameters given to sf2sig type of cal
help_struct_all.special_signal = 'specific parameter,area-base,param-set,time-base signal, can be provided as 4th signal in data_request if explicit. Example: ''special_signal'',''param:gyro_freq''';
help_struct_all.fit_tension = ['smoothing value used in interpos fitting routine, -30 means ''30 times default value'', thus -1 often a' ...
' good value' char(10) ...
- 'cxrs, nete: if numeric, default for all cases, if structure, default for non given fields'];
+ 'cxrs, nete: if numeric, default for all cases, if structure, default for non given fields'];
help_struct_all.time = 'time(s) value(s) if relevant, for example eqdsk is provided by default only for time=1.0s';
% $$$ help_struct_all.zshift = 'vertical shift of equilibrium, either for eqdsk (1 to shift to zaxis=0) or for mapping measurements on to rho surfaces [m]';
help_struct_all.cocos = ['cocos value desired in output, uses eqdsk_cocos_transform. Note should use latter if a specific Ip and/or B0 sign' ...
@@ -41,8 +41,8 @@ help_struct_all.fit = '0, no fit profiles, 1 (default) if fit profiles desired a
help_struct_all.fit_type = 'type of fits ''std'' (default) uses diagnostic error bars, ''pedestal'', uses manual error bars with smaller values outside 0.8';
help_struct_all.fit_nb_rho_points = 'nb of points for the radial mesh over which the fits are evaluated for the fitted profiles, it uses an equidistant mesh at this stage';
help_struct_all.source = ['sxr: ''G'' (default, with ssx), camera name ''J'', ''G'', ...[F-M], case insensitive;' char(10) ...
- 'cxrs: ''CEZ'' (default), ''CMZ'',''CUZ'',''COZ'',''all'';' char(10) ...
- 'raptor: ''observer'', ''predictive'' (or ''obs'', ''pre'') to restrict the ouput to these signals'];
+ 'cxrs: ''CEZ'' (default), ''CMZ'',''CUZ'',''COZ'',''all'';' char(10) ...
+ 'raptor: ''observer'', ''predictive'' (or ''obs'', ''pre'') to restrict the ouput to these signals'];
help_struct_all.source_exp_name = ['ne_rho, te_rho, nete_rho for fit from TRA source typically or IDA when expname not the same as formain signal'];
help_struct_all.camera = ['[] (default, all), [i1 i2 ...] chord nbs ([1 3 5] if only chords 1, 3 and 5 are desired), ''central'' uses J_049'];
help_struct_all.freq = '''slow'', default (means ssx, 500kHz), lower sampling; ''fast'' full samples 2MHz; integer value nn for downsampling every nn''th points';
diff --git a/matlab/AUG/aug_requests_mapping.m b/matlab/AUG/aug_requests_mapping.m
index 4ec989ebce289664a0df30a814a73b94cee0e5fb..43a991fbd99a2a8e3d054eec5134ee65c273898c 100644
--- a/matlab/AUG/aug_requests_mapping.m
+++ b/matlab/AUG/aug_requests_mapping.m
@@ -5,13 +5,13 @@ function mapping = aug_requests_mapping(data_request)
% Defaults
mapping = struct(...
- 'label', '', ...
- 'method', '', ...
- 'expression','', ...
- 'timedim', -1, ... % dim which is the time is the database, to copy in .t, the other dims are in .x (-1 means last dimension)
- 'gdat_timedim',[], ... % if need to reshape data and dim orders to have timedim as gdat_timedim (shifting time to gdat_timedim)
- 'min', -inf, ...
- 'max', inf);
+ 'label', '', ...
+ 'method', '', ...
+ 'expression','', ...
+ 'timedim', -1, ... % dim which is the time is the database, to copy in .t, the other dims are in .x (-1 means last dimension)
+ 'gdat_timedim',[], ... % if need to reshape data and dim orders to have timedim as gdat_timedim (shifting time to gdat_timedim)
+ 'min', -inf, ...
+ 'max', inf);
% Note that gdat_timedim is set to timedim at end of this function if empty
% gdat_timedim should have effective index of the time dimension in gdat
@@ -38,166 +38,166 @@ if iscell(data_request) % || (~ischar(data_request) && length(data_request)>1)
end
switch lower(data_request)
- case 'a_minor'
- mapping.timedim = 1;
- mapping.label = 'a\_minor';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''r_inboard'';' ...
+ case 'a_minor'
+ mapping.timedim = 1;
+ mapping.label = 'a\_minor';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''r_inboard'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);gdat_tmp.r_inboard=gdat_tmp.data;' ...
- 'params_eff.data_request=''r_outboard'';' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.r_outboard=gdat_tmp2.data;' ...
- 'gdat_tmp.data = 0.5.*(gdat_tmp2.data-gdat_tmp.data);gdat_tmp.label=''' mapping.label ''';' ...
- 'gdat_tmp.gdat_request=''' data_request ''';'];
- case 'b0'
- mapping.timedim = 1;
- mapping.label = 'B_0';
- % mapping.method = 'signal';
- % mapping.expression = [{'FPC'},{'BTF'}];
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''FPC''},{''BTF''}];' ...
- 'gdat_tmp=gdat_aug(shot,params_eff);r0exp=1.65;gdat_tmp.r0 = r0exp; gdat_tmp.request_description = ' ...
- '[''vacuum magnetic field at R0='' num2str(r0exp) ''m; COCOS=17''];' ...
+ 'params_eff.data_request=''r_outboard'';' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.r_outboard=gdat_tmp2.data;' ...
+ 'gdat_tmp.data = 0.5.*(gdat_tmp2.data-gdat_tmp.data);gdat_tmp.label=''' mapping.label ''';' ...
+ 'gdat_tmp.gdat_request=''' data_request ''';'];
+ case 'b0'
+ mapping.timedim = 1;
+ mapping.label = 'B_0';
+ % mapping.method = 'signal';
+ % mapping.expression = [{'FPC'},{'BTF'}];
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''FPC''},{''BTF''}];' ...
+ 'gdat_tmp=gdat_aug(shot,params_eff);r0exp=1.65;gdat_tmp.r0 = r0exp; gdat_tmp.request_description = ' ...
+ '[''vacuum magnetic field at R0='' num2str(r0exp) ''m; COCOS=17''];' ...
'gdat_tmp.label=''' mapping.label ''';' ...
- 'gdat_tmp.gdat_request=''' data_request ''';'];
- case 'beta'
- mapping.timedim = 1;
- mapping.label = '\beta';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''betan'';' ...
+ 'gdat_tmp.gdat_request=''' data_request ''';'];
+ case 'beta'
+ mapping.timedim = 1;
+ mapping.label = '\beta';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''betan'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);' ...
- 'params_eff.data_request=''ip'';gdat_tmp2=gdat_aug(shot,params_eff);' ...
- 'params_eff.data_request=''b0'';gdat_tmp3=gdat_aug(shot,params_eff);' ...
- 'params_eff.data_request=''a_minor'';gdat_tmp4=gdat_aug(shot,params_eff);' ...
- 'tmp_data_ip=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
- 'tmp_data_b0=interp1(gdat_tmp3.t,gdat_tmp3.data,gdat_tmp.t,[],NaN);' ...
- 'tmp_data_a=interp1(gdat_tmp4.t,gdat_tmp4.data,gdat_tmp.t,[],NaN);' ...
- 'gdat_tmp.data = 0.01.*abs(gdat_tmp.data.*tmp_data_ip./1e6./tmp_data_a./tmp_data_b0);'];
- case 'betan'
- mapping.timedim = 1;
- mapping.label = '\beta_N';
- mapping.method = 'signal';
- mapping.expression = [{'TOT'},{'beta_N'}];
- % in many cases, in particular just after an experiment, betaN is not present in TOT, thus compute it from 2/3Wmhd/V /(B0^2/2mu0)
+ 'params_eff.data_request=''ip'';gdat_tmp2=gdat_aug(shot,params_eff);' ...
+ 'params_eff.data_request=''b0'';gdat_tmp3=gdat_aug(shot,params_eff);' ...
+ 'params_eff.data_request=''a_minor'';gdat_tmp4=gdat_aug(shot,params_eff);' ...
+ 'tmp_data_ip=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
+ 'tmp_data_b0=interp1(gdat_tmp3.t,gdat_tmp3.data,gdat_tmp.t,[],NaN);' ...
+ 'tmp_data_a=interp1(gdat_tmp4.t,gdat_tmp4.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp.data = 0.01.*abs(gdat_tmp.data.*tmp_data_ip./1e6./tmp_data_a./tmp_data_b0);'];
+ case 'betan'
+ mapping.timedim = 1;
+ mapping.label = '\beta_N';
+ mapping.method = 'signal';
+ mapping.expression = [{'TOT'},{'beta_N'}];
+ % in many cases, in particular just after an experiment, betaN is not present in TOT, thus compute it from 2/3Wmhd/V /(B0^2/2mu0)
% $$$ mapping.method = 'expression';
% $$$ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''TOT''},{''beta_2N''},{''AUGD''}];' ...
% $$$ 'gdat_tmp=gdat_aug(shot,params_eff); if isempty(gdat_tmp.data);' ...
-% $$$ 'params_eff.data_request=''ip'';gdat_ip=gdat_aug(shot,params_eff);' ...
-% $$$ 'params_eff.data_request=''b0'';gdat_b0=gdat_aug(shot,params_eff);' ...
-% $$$ 'params_eff.data_request=''a_minor'';gdat_aminor=gdat_aug(shot,params_eff);' ...
-% $$$ 'params_eff.data_request=''wmhd'';gdat_tmp=gdat_aug(shot,params_eff);' ...
-% $$$ 'params_eff.data_request=''volume'';gdat_vol=gdat_aug(shot,params_eff);' ...
-% $$$ 'tmp_data_ip=interp1(gdat_ip.t,gdat_ip.data,gdat_tmp.t,[],NaN);' ...
-% $$$ 'tmp_data_b0=interp1(gdat_b0.t,gdat_b0.data,gdat_tmp.t,[],NaN);' ...
-% $$$ 'tmp_data_a=interp1(gdat_aminor.t,gdat_aminor.data,gdat_tmp.t,[],NaN);' ...
-% $$$ 'tmp_data_vol=interp1(gdat_vol.t,gdat_vol.data,gdat_tmp.t,[],NaN);' ...
-% $$$ 'gdat_tmp.data = 100.*abs(2./3.*gdat_tmp.data./tmp_data_vol.*8e-7.*pi./tmp_data_b0.^2./tmp_data_ip.*1e6.*tmp_data_a.*tmp_data_b0);end;'];
- case {'betap', 'beta_p', 'beta_pol'}
- mapping.timedim = 1;
- mapping.label = '\beta_p';
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'betpol'}];
- case {'cxrs', 'cxrs_rho'}
- mapping.timedim = 2;
- mapping.label = 'cxrs';
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'delta'
- mapping.timedim = 1;
- mapping.label = 'delta';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''delta_bottom''; ' ...
+% $$$ 'params_eff.data_request=''ip'';gdat_ip=gdat_aug(shot,params_eff);' ...
+% $$$ 'params_eff.data_request=''b0'';gdat_b0=gdat_aug(shot,params_eff);' ...
+% $$$ 'params_eff.data_request=''a_minor'';gdat_aminor=gdat_aug(shot,params_eff);' ...
+% $$$ 'params_eff.data_request=''wmhd'';gdat_tmp=gdat_aug(shot,params_eff);' ...
+% $$$ 'params_eff.data_request=''volume'';gdat_vol=gdat_aug(shot,params_eff);' ...
+% $$$ 'tmp_data_ip=interp1(gdat_ip.t,gdat_ip.data,gdat_tmp.t,[],NaN);' ...
+% $$$ 'tmp_data_b0=interp1(gdat_b0.t,gdat_b0.data,gdat_tmp.t,[],NaN);' ...
+% $$$ 'tmp_data_a=interp1(gdat_aminor.t,gdat_aminor.data,gdat_tmp.t,[],NaN);' ...
+% $$$ 'tmp_data_vol=interp1(gdat_vol.t,gdat_vol.data,gdat_tmp.t,[],NaN);' ...
+% $$$ 'gdat_tmp.data = 100.*abs(2./3.*gdat_tmp.data./tmp_data_vol.*8e-7.*pi./tmp_data_b0.^2./tmp_data_ip.*1e6.*tmp_data_a.*tmp_data_b0);end;'];
+ case {'betap', 'beta_p', 'beta_pol'}
+ mapping.timedim = 1;
+ mapping.label = '\beta_p';
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'betpol'}];
+ case {'cxrs', 'cxrs_rho'}
+ mapping.timedim = 2;
+ mapping.label = 'cxrs';
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'delta'
+ mapping.timedim = 1;
+ mapping.label = 'delta';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''delta_bottom''; ' ...
'gdat_tmp=gdat_aug(shot,params_eff);params_eff.data_request=''delta_top'';' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.data = 0.5.*(gdat_tmp.data+gdat_tmp2.data);'];
- case 'delta_top'
- mapping.label = 'delta\_top';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'delRoben'}];
- case 'delta_bottom'
- mapping.label = 'delta\_bottom';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'delRuntn'}];
- case {'ece', 'eced', 'ece_rho', 'eced_rho'}
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'eqdsk'
- mapping.timedim = 2;
- mapping.method = 'switchcase'; % could use function make_eqdsk directly?
- mapping.expression = '';
- case 'equil'
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase'; % could use function make_eqdsk directly?
- mapping.expression = '';
- case {'gas', 'gas_valve'}
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase';
- case 'halpha'
- mapping.timedim = 1;
- mapping.label = 'Halpha';
- mapping.method = 'signal';
- mapping.expression = [{'POT'},{'ELMa-Han'}];
- case 'h_scalings'
- mapping.label = 'H_{scal}';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'TTH'},{'H/L-facs'},{'AUGD'}];
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''TTH''},{''H/L-facs''},{''AUGD''}];params_eff.source=''TTH'';' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.data = 0.5.*(gdat_tmp.data+gdat_tmp2.data);'];
+ case 'delta_top'
+ mapping.label = 'delta\_top';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'delRoben'}];
+ case 'delta_bottom'
+ mapping.label = 'delta\_bottom';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'delRuntn'}];
+ case {'ece', 'eced', 'ece_rho', 'eced_rho'}
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'eqdsk'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase'; % could use function make_eqdsk directly?
+ mapping.expression = '';
+ case 'equil'
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase'; % could use function make_eqdsk directly?
+ mapping.expression = '';
+ case {'gas', 'gas_valve'}
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase';
+ case 'halpha'
+ mapping.timedim = 1;
+ mapping.label = 'Halpha';
+ mapping.method = 'signal';
+ mapping.expression = [{'POT'},{'ELMa-Han'}];
+ case 'h_scalings'
+ mapping.label = 'H_{scal}';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'TTH'},{'H/L-facs'},{'AUGD'}];
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''TTH''},{''H/L-facs''},{''AUGD''}];params_eff.source=''TTH'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);S = rdaAUG_eff(shot,''TTH'',''scal_par'',''AUGD'',[],[],''param:descript'');gdat_tmp.dimunits{1}=cellstr(deblank(S.data''));' ...
'gdat_tmp.data = min(gdat_tmp.data,10.);'];
- case 'ids'
- mapping.timedim = 1;
- mapping.label = 'ids ala imas';
- mapping.method = 'switchcase';
- case 'ioh'
- mapping.timedim = 1;
- mapping.label = 'I ohmic transformer';
- mapping.method = 'signal';
- mapping.expression = [{'MBI'},{'IOH'}];
- case 'ip'
- mapping.timedim = 1;
- mapping.label = 'Plasma current';
- mapping.method = 'signal';
- mapping.expression = [{'MAG'},{'Ipa'}];
- mapping.expression = [{'FPC'},{'IpiFP'}];
- case 'kappa'
- mapping.timedim = 1;
- mapping.label = '\kappa';
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'k'}];
- case 'kappa_top'
- mapping.timedim = 1;
- mapping.label = '\kappa^{top}';
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'koben'}];
- case 'kappa_bottom'
- mapping.timedim = 1;
- mapping.label = '\kappa_{bottom}';
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'kuntn'}];
- case 'li'
- mapping.timedim = 1;
- mapping.label = 'l_i';
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'li'}];
- case 'li3'
- mapping.timedim = 1;
- mapping.label = 'li3';
- mapping.method = 'expression';
- % li and betapol should have similar "normalization", using Bpa=int(Bp dlp)/int(dlp) and V=2pi R0 pi a^2 kappa and int(dlp)=2pi a sqrt(kappa) we get 2/R0 = int(dlp)^2/V so li3 is defined as [
- % li3 = 2 int(Bp^2 dV) / (mu0^2 Ip^2 R0)
- % while li ala EFIT [https://iopscience.iop.org/article/10.1088/0029-5515/25/10/004 Eq.(5)] or CLISTE/IDE/GPEC [https://doi.org/10.13182/FST15-154 p.5] by
- % li1 = int(Bp^2 dV) / (V Bpa^2) = int(Bp^2 dV) / (mu0^2 Ip^2) * int(dlp)^2 / V = CONVF * li3
- % CONVF = conversion_factor_liefit_li3 = int(dlp)^2/V * R0/2
- help_text = ['sprintf(''%s\n%s\n%s%s\n%s\n%s'',''li3 = 2 int(Bp^2 dV) / (mu0^2 Ip^2 R0), see Freidberg or '',', ...
- '''CHEASE https://doi.org/10.1016/0010-4655(96)00046-X p. 5'',', ...
- '''li ala EFIT [https://iopscience.iop.org/article/10.1088/0029-5515/25/10/004 Eq.(5)], CLISTE, IDE, '',', ...
- '''GPEC [https://doi.org/10.13182/FST15-154 p.5]'',', ...
- '''li = int(Bp^2 dV) / (V Bpa^2) = int(Bp^2 dV) / (mu0^2 Ip^2) * int(dlp)^2 / V = CONVF * li3'',', ...
- '''CONVF = conversion_factor_liefit_li3 = int(dlp)^2/V * R0/2'')'];
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''li'';' ...
+ case 'ids'
+ mapping.timedim = 1;
+ mapping.label = 'ids ala imas';
+ mapping.method = 'switchcase';
+ case 'ioh'
+ mapping.timedim = 1;
+ mapping.label = 'I ohmic transformer';
+ mapping.method = 'signal';
+ mapping.expression = [{'MBI'},{'IOH'}];
+ case 'ip'
+ mapping.timedim = 1;
+ mapping.label = 'Plasma current';
+ mapping.method = 'signal';
+ mapping.expression = [{'MAG'},{'Ipa'}];
+ mapping.expression = [{'FPC'},{'IpiFP'}];
+ case 'kappa'
+ mapping.timedim = 1;
+ mapping.label = '\kappa';
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'k'}];
+ case 'kappa_top'
+ mapping.timedim = 1;
+ mapping.label = '\kappa^{top}';
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'koben'}];
+ case 'kappa_bottom'
+ mapping.timedim = 1;
+ mapping.label = '\kappa_{bottom}';
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'kuntn'}];
+ case 'li'
+ mapping.timedim = 1;
+ mapping.label = 'l_i';
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'li'}];
+ case 'li3'
+ mapping.timedim = 1;
+ mapping.label = 'li3';
+ mapping.method = 'expression';
+ % li and betapol should have similar "normalization", using Bpa=int(Bp dlp)/int(dlp) and V=2pi R0 pi a^2 kappa and int(dlp)=2pi a sqrt(kappa) we get 2/R0 = int(dlp)^2/V so li3 is defined as [
+ % li3 = 2 int(Bp^2 dV) / (mu0^2 Ip^2 R0)
+ % while li ala EFIT [https://iopscience.iop.org/article/10.1088/0029-5515/25/10/004 Eq.(5)] or CLISTE/IDE/GPEC [https://doi.org/10.13182/FST15-154 p.5] by
+ % li1 = int(Bp^2 dV) / (V Bpa^2) = int(Bp^2 dV) / (mu0^2 Ip^2) * int(dlp)^2 / V = CONVF * li3
+ % CONVF = conversion_factor_liefit_li3 = int(dlp)^2/V * R0/2
+ help_text = ['sprintf(''%s\n%s\n%s%s\n%s\n%s'',''li3 = 2 int(Bp^2 dV) / (mu0^2 Ip^2 R0), see Freidberg or '',', ...
+ '''CHEASE https://doi.org/10.1016/0010-4655(96)00046-X p. 5'',', ...
+ '''li ala EFIT [https://iopscience.iop.org/article/10.1088/0029-5515/25/10/004 Eq.(5)], CLISTE, IDE, '',', ...
+ '''GPEC [https://doi.org/10.13182/FST15-154 p.5]'',', ...
+ '''li = int(Bp^2 dV) / (V Bpa^2) = int(Bp^2 dV) / (mu0^2 Ip^2) * int(dlp)^2 / V = CONVF * li3'',', ...
+ '''CONVF = conversion_factor_liefit_li3 = int(dlp)^2/V * R0/2'')'];
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''li'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);ij=find(gdat_tmp.data<=0);gdat_tmp.data(ij)=NaN;' ...
'r0exp=1.65;gdat_tmp.r0=r0exp;' ...
'params_eff.data_request=''volume'';' ...
@@ -205,117 +205,117 @@ switch lower(data_request)
'params_eff.data_request=[{''FPG''},{''Circumf''}];' ...
'gdat_pol_length=gdat_aug(shot,params_eff);ij=find(gdat_pol_length.data<=0);gdat_pol_length.data(ij)=NaN;' ...
'gdat_tmp.conversion_factor_liefit_li3=gdat_tmp.r0./2.*gdat_pol_length.data.^2./max(abs(gdat_vol.data),1e-1);' ...
- 'gdat_tmp.data = gdat_tmp.data./gdat_tmp.conversion_factor_liefit_li3;' ...
+ 'gdat_tmp.data = gdat_tmp.data./gdat_tmp.conversion_factor_liefit_li3;' ...
'gdat_tmp.help = ' help_text ';'];
- case 'mhd'
- mapping.timedim = 1;
- mapping.label = {'n\_odd','n\_even'};% this superseeds the expression
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''MOD'',''OddN''}; ' ...
+ case 'mhd'
+ mapping.timedim = 1;
+ mapping.label = {'n\_odd','n\_even'};% this superseeds the expression
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''MOD'',''OddN''}; ' ...
'gdat_tmp=gdat_aug(shot,params_eff);gdat_tmp.data=reshape(gdat_tmp.data,length(gdat_tmp.data),1 );' ...
- 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
- 'gdat_tmp.n_odd.data = gdat_tmp.data;gdat_tmp.n_odd.data_request=params_eff.data_request;' ...
- 'params_eff.data_request={''MOD'',''EvenN''};' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
- 'gdat_tmp.n_even.data = gdat_tmp2.data;gdat_tmp.n_even.data_request=params_eff.data_request;gdat_tmp.label={''n\_odd'',''n\_even''};' ...
- 'params_eff.data_request={''MOD'',''OddNAmp''};' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.n_odd.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
- 'gdat_tmp.n_odd.amp_t=gdat_tmp2.t;' ...
- 'params_eff.data_request={''MOD'',''EvenNAmp''};' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.n_even.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
- 'gdat_tmp.n_even.amp_t=gdat_tmp2.t;' ...
- 'gdat_tmp.full_path=''MOD/Odd in data and .n_odd; .n_even'';' ...
- 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
- case 'ne'
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- case 'neint'
- mapping.timedim = 1;
- mapping.label = 'line integrated el. density';
- % mapping.method = 'signal';
- mapping.method = 'expression';
- mapping.expression = [{'DCN'},{'H-1'},{'AUGD'}];
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''DCN'',''H-1'',''AUGD''};' ...
+ 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
+ 'gdat_tmp.n_odd.data = gdat_tmp.data;gdat_tmp.n_odd.data_request=params_eff.data_request;' ...
+ 'params_eff.data_request={''MOD'',''EvenN''};' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+ 'gdat_tmp.n_even.data = gdat_tmp2.data;gdat_tmp.n_even.data_request=params_eff.data_request;gdat_tmp.label={''n\_odd'',''n\_even''};' ...
+ 'params_eff.data_request={''MOD'',''OddNAmp''};' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.n_odd.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+ 'gdat_tmp.n_odd.amp_t=gdat_tmp2.t;' ...
+ 'params_eff.data_request={''MOD'',''EvenNAmp''};' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.n_even.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+ 'gdat_tmp.n_even.amp_t=gdat_tmp2.t;' ...
+ 'gdat_tmp.full_path=''MOD/Odd in data and .n_odd; .n_even'';' ...
+ 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
+ case 'ne'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ case 'neint'
+ mapping.timedim = 1;
+ mapping.label = 'line integrated el. density';
+ % mapping.method = 'signal';
+ mapping.method = 'expression';
+ mapping.expression = [{'DCN'},{'H-1'},{'AUGD'}];
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''DCN'',''H-1'',''AUGD''};' ...
'if any(shot==[39311, 39599]);params_eff.data_request={''TTH'',''dcn_reco'',''PUETTI''};end;' ...
'gdat_tmp=gdat_aug(shot,params_eff);'];
- case 'nel'
- mapping.timedim = 1;
- mapping.label = 'line-averaged el. density';
- mapping.expression = [{'FPG'},{'lenH-1'},{'AUGD'}];
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''neint'';' ...
+ case 'nel'
+ mapping.timedim = 1;
+ mapping.label = 'line-averaged el. density';
+ mapping.expression = [{'FPG'},{'lenH-1'},{'AUGD'}];
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''neint'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);params_eff.data_request=[{''FPG''},{''lenH-1''},{''AUGD''}];' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
- 'tmp_data=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
- 'gdat_tmp.data = gdat_tmp.data./(tmp_data+1e-5);'];
- case 'ne_rho'
- mapping.timedim = 2;
- mapping.label = 'ne';
- mapping.method = 'switchcase';
- case 'nete_rho'
- mapping.timedim = 2;
- mapping.label = 'ne and Te';
- mapping.method = 'switchcase';
- case {'ng','ngreenwald','n_greenwald'}
- mapping.timedim = 1;
- mapping.label = 'nG=Ip[MA]/(\pi a^2)*1e20 on nel times';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
+ 'tmp_data=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp.data = gdat_tmp.data./(tmp_data+1e-5);'];
+ case 'ne_rho'
+ mapping.timedim = 2;
+ mapping.label = 'ne';
+ mapping.method = 'switchcase';
+ case 'nete_rho'
+ mapping.timedim = 2;
+ mapping.label = 'ne and Te';
+ mapping.method = 'switchcase';
+ case {'ng','ngreenwald','n_greenwald'}
+ mapping.timedim = 1;
+ mapping.label = 'nG=Ip[MA]/(\pi a^2)*1e20 on nel times';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);params_eff.data_request=''ip'';' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
- 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
+ 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
'params_eff.data_request=''a_minor'';' ...
- 'gdat_tmp3=gdat_aug(shot,params_eff);ij=find(gdat_tmp3.data==0);gdat_tmp3.data(ij)=NaN;' ...
- 'tmp_data3=interp1(gdat_tmp3.t,gdat_tmp3.data,gdat_tmp.t,[],NaN);' ...
- 'gdat_tmp.data = tmp_data2*1e-6./pi./(tmp_data3.^2+1e-5);' ...
- 'ij=find(gdat_tmp.data<0 | gdat_tmp.data>4);gdat_tmp.data(ij)=NaN;gdat_tmp.data = gdat_tmp.data * 1e20;'];
- case {'ngf','greenwald_fraction','f_greenwald','ng_fraction'}
- mapping.timedim = 1;
- mapping.label = 'Greenwald\_fraction=n\_el/n\_G';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ 'gdat_tmp3=gdat_aug(shot,params_eff);ij=find(gdat_tmp3.data==0);gdat_tmp3.data(ij)=NaN;' ...
+ 'tmp_data3=interp1(gdat_tmp3.t,gdat_tmp3.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp.data = tmp_data2*1e-6./pi./(tmp_data3.^2+1e-5);' ...
+ 'ij=find(gdat_tmp.data<0 | gdat_tmp.data>4);gdat_tmp.data(ij)=NaN;gdat_tmp.data = gdat_tmp.data * 1e20;'];
+ case {'ngf','greenwald_fraction','f_greenwald','ng_fraction'}
+ mapping.timedim = 1;
+ mapping.label = 'Greenwald\_fraction=n\_el/n\_G';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);params_eff.data_request=''n_greenwald'';' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
- 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
- 'gdat_tmp.data = gdat_tmp.data./(tmp_data2+1e-5);'];
+ 'gdat_tmp2=gdat_aug(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
+ 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp.data = gdat_tmp.data./(tmp_data2+1e-5);'];
% $$$ case 'ni'
% $$$ mapping.method = 'switchcase'; % especially since might have option fit, etc
- case 'pellet'
- mapping.timedim = 1;
- mapping.label = 'line integrated el. density';
- mapping.method = 'signal';
- mapping.expression = [{'PEL'},{'5Co'},{'AUGD'}];
- case 'pgyro'
- mapping.timedim = 1;
- mapping.label = 'EC gyros';
- mapping.method = 'switchcase';
- case 'powers'
- mapping.timedim = 1;
- mapping.label = 'various powers';
- mapping.method = 'switchcase';
- case {'prad', 'p_rad'}
- mapping.timedim = 1;
- mapping.label = 'P_{rad}';
- mapping.method = 'signal';
- mapping.expression = [{'BPD'},{'Pradtot'},{'AUGD'}];
- case 'psi_axis'
- mapping.timedim = 1;
- mapping.method = 'switchcase'; % there is psi_axis-psi_edge in FPG but otherwise complicated to get from equil, thus needs swticth case
- mapping.label ='psi_\axis' ;
- case 'psi_edge'
- mapping.timedim = 1;
- mapping.method = 'switchcase'; % is set to zero, so not in tree nodes
- mapping.label = 'psi\_edge';
- case 'q0'
- mapping.timedim = 1;
- mapping.label = 'q_0';
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'q0'},{'AUGD'}];
- case 'q95'
- mapping.timedim = 1;
- mapping.label = 'q_{95}';
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'q95'},{'AUGD'}];
+ case 'pellet'
+ mapping.timedim = 1;
+ mapping.label = 'line integrated el. density';
+ mapping.method = 'signal';
+ mapping.expression = [{'PEL'},{'5Co'},{'AUGD'}];
+ case 'pgyro'
+ mapping.timedim = 1;
+ mapping.label = 'EC gyros';
+ mapping.method = 'switchcase';
+ case 'powers'
+ mapping.timedim = 1;
+ mapping.label = 'various powers';
+ mapping.method = 'switchcase';
+ case {'prad', 'p_rad'}
+ mapping.timedim = 1;
+ mapping.label = 'P_{rad}';
+ mapping.method = 'signal';
+ mapping.expression = [{'BPD'},{'Pradtot'},{'AUGD'}];
+ case 'psi_axis'
+ mapping.timedim = 1;
+ mapping.method = 'switchcase'; % there is psi_axis-psi_edge in FPG but otherwise complicated to get from equil, thus needs swticth case
+ mapping.label ='psi_\axis' ;
+ case 'psi_edge'
+ mapping.timedim = 1;
+ mapping.method = 'switchcase'; % is set to zero, so not in tree nodes
+ mapping.label = 'psi\_edge';
+ case 'q0'
+ mapping.timedim = 1;
+ mapping.label = 'q_0';
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'q0'},{'AUGD'}];
+ case 'q95'
+ mapping.timedim = 1;
+ mapping.label = 'q_{95}';
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'q95'},{'AUGD'}];
% $$$ case 'q_edge' % should use q_rho and then take q_edge since does not make sense for diverted shots and mainly diverted shots...
% $$$ mapping.timedim = 1;
% $$$ mapping.label = 'q_{edge}}';
@@ -323,146 +323,146 @@ switch lower(data_request)
% $$$ mapping.method = 'switchcase';
% $$$ mapping.expression = [{'FPG'},{'q95'},{'AUGD'}];
% $$$ mapping.expression = [];
- case 'q_rho'
- mapping.timedim = 2;
- mapping.gdat_timedim = 2;
- mapping.label = 'q';
- mapping.method = 'switchcase';
- case 'raptor'
- mapping.timedim = 2;
- mapping.gdat_timedim = 2;
- mapping.label = 'Raptor signals';
- mapping.method = 'switchcase';
- case 'rgeom'
- mapping.label = 'Rgeom';
- mapping.timedim = 1;
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''r_inboard'';' ...
+ case 'q_rho'
+ mapping.timedim = 2;
+ mapping.gdat_timedim = 2;
+ mapping.label = 'q';
+ mapping.method = 'switchcase';
+ case 'raptor'
+ mapping.timedim = 2;
+ mapping.gdat_timedim = 2;
+ mapping.label = 'Raptor signals';
+ mapping.method = 'switchcase';
+ case 'rgeom'
+ mapping.label = 'Rgeom';
+ mapping.timedim = 1;
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''r_inboard'';' ...
'gdat_tmp=gdat_aug(shot,params_eff);gdat_tmp.r_inboard=gdat_tmp.data;' ...
- 'params_eff.data_request=''r_outboard'';' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.r_outboard=gdat_tmp2.data;' ...
- 'gdat_tmp.data = 0.5.*(gdat_tmp2.data+gdat_tmp.data);gdat_tmp.label=''' mapping.label ''';' ...
- 'gdat_tmp.gdat_request=''' data_request ''';'];
- case 'r_inboard'
- mapping.label = 'R\_inboard';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Rin'},{'AUGD'}];
- case 'r_outboard'
- mapping.label = 'R\_outboard';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Raus'},{'AUGD'}];
- case 'rhotor'
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor';
- case 'rhotor_edge'
- mapping.timedim = 1;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor\_edge';
- case 'rhotor_norm'
- mapping.timedim = 1;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor\_norm';
- case 'rhovol'
- mapping.timedim = 2;
- mapping.label = 'rhovol\_norm';
- mapping.method = 'switchcase';
- case {'rmag', 'r_axis', 'r_mag'}
- mapping.label = 'R\_magaxis';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Rmag'},{'AUGD'}];
- case 'sxr'
- mapping.timedim = 1;
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase';
- case 'tau_tot'
- mapping.label = '\tau_{tot}';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'TOT'},{'tau_tot'},{'AUGD'}];
- case 'te'
- mapping.timedim = 2;
- mapping.label = 'Te';
- mapping.method = 'switchcase';
- case 'te_rho'
- mapping.timedim = 2;
- mapping.label = 'Te';
- mapping.method = 'switchcase';
+ 'params_eff.data_request=''r_outboard'';' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.r_outboard=gdat_tmp2.data;' ...
+ 'gdat_tmp.data = 0.5.*(gdat_tmp2.data+gdat_tmp.data);gdat_tmp.label=''' mapping.label ''';' ...
+ 'gdat_tmp.gdat_request=''' data_request ''';'];
+ case 'r_inboard'
+ mapping.label = 'R\_inboard';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Rin'},{'AUGD'}];
+ case 'r_outboard'
+ mapping.label = 'R\_outboard';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Raus'},{'AUGD'}];
+ case 'rhotor'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor';
+ case 'rhotor_edge'
+ mapping.timedim = 1;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor\_edge';
+ case 'rhotor_norm'
+ mapping.timedim = 1;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor\_norm';
+ case 'rhovol'
+ mapping.timedim = 2;
+ mapping.label = 'rhovol\_norm';
+ mapping.method = 'switchcase';
+ case {'rmag', 'r_axis', 'r_mag'}
+ mapping.label = 'R\_magaxis';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Rmag'},{'AUGD'}];
+ case 'sxr'
+ mapping.timedim = 1;
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase';
+ case 'tau_tot'
+ mapping.label = '\tau_{tot}';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'TOT'},{'tau_tot'},{'AUGD'}];
+ case 'te'
+ mapping.timedim = 2;
+ mapping.label = 'Te';
+ mapping.method = 'switchcase';
+ case 'te_rho'
+ mapping.timedim = 2;
+ mapping.label = 'Te';
+ mapping.method = 'switchcase';
% $$$ case 'ti' % case to be set
% $$$ mapping.label = 'Ti';
% $$$ mapping.method = 'switchcase';
- case 'vloop'
- mapping.label = 'Vloop';
- mapping.timedim = 1;
- % mapping.method = 'signal';
- % mapping.expression = [{'MAG'},{'ULid12'},{'AUGD'}];
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''MAG''},{''ULid12''},{''AUGD''}];' ...
- 'gdat_tmp=gdat_aug(shot,params_eff);ij=find(~isnan(gdat_tmp.data));' ...
- 'tmp_data=interpos(gdat_tmp.t,gdat_tmp.data,-3e4);' ...
- 'gdat_tmp.data_smooth = tmp_data;gdat_tmp.gdat_request=''vloop'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
- case {'volume', 'volume_edge'}
- mapping.label = 'Volume';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Vol'},{'AUGD'}];
- case 'volume_rho'
- mapping.timedim = 2;
- mapping.label = 'Volume';
- mapping.method = 'switchcase';
- case {'wmhd' 'w_mhd'}
- mapping.label = 'Wmhd';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Wmhd'},{'AUGD'}];
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''FPG''},{''Wmhd''},{''AUGD''}];' ...
- 'gdat_tmp=gdat_aug(shot,params_eff);ij=find(~isnan(gdat_tmp.data)); gdat_tmp.data_raw=gdat_tmp.data;' ...
- 'tmp_data=interpos(gdat_tmp.t(ij),gdat_tmp.data(ij),gdat_tmp.t,-1e5);' ...
- 'gdat_tmp.data = max(tmp_data,0.);'];
- case {'zeff', 'z_eff'}
- mapping.timedim = 1;
- mapping.label = 'zeff';
- mapping.method = 'switchcase';
+ case 'vloop'
+ mapping.label = 'Vloop';
+ mapping.timedim = 1;
+ % mapping.method = 'signal';
+ % mapping.expression = [{'MAG'},{'ULid12'},{'AUGD'}];
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''MAG''},{''ULid12''},{''AUGD''}];' ...
+ 'gdat_tmp=gdat_aug(shot,params_eff);ij=find(~isnan(gdat_tmp.data));' ...
+ 'tmp_data=interpos(gdat_tmp.t,gdat_tmp.data,-3e4);' ...
+ 'gdat_tmp.data_smooth = tmp_data;gdat_tmp.gdat_request=''vloop'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
+ case {'volume', 'volume_edge'}
+ mapping.label = 'Volume';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Vol'},{'AUGD'}];
+ case 'volume_rho'
+ mapping.timedim = 2;
+ mapping.label = 'Volume';
+ mapping.method = 'switchcase';
+ case {'wmhd' 'w_mhd'}
+ mapping.label = 'Wmhd';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Wmhd'},{'AUGD'}];
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''FPG''},{''Wmhd''},{''AUGD''}];' ...
+ 'gdat_tmp=gdat_aug(shot,params_eff);ij=find(~isnan(gdat_tmp.data)); gdat_tmp.data_raw=gdat_tmp.data;' ...
+ 'tmp_data=interpos(gdat_tmp.t(ij),gdat_tmp.data(ij),gdat_tmp.t,-1e5);' ...
+ 'gdat_tmp.data = max(tmp_data,0.);'];
+ case {'zeff', 'z_eff'}
+ mapping.timedim = 1;
+ mapping.label = 'zeff';
+ mapping.method = 'switchcase';
% $$$ ZES obsolete, use cxrs
% $$$ mapping.label = 'zeff from cxrs';
% $$$ mapping.timedim = 1;
% $$$ mapping.method = 'signal';
% $$$ mapping.expression = [{'ZES'},{'Zeff'},{'AUGD'}];
- case 'zgeom'
- mapping.label = 'Zgeom';
- mapping.timedim = 1;
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''FPG''},{''Zoben''},{''AUGD''}];' ...
+ case 'zgeom'
+ mapping.label = 'Zgeom';
+ mapping.timedim = 1;
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''FPG''},{''Zoben''},{''AUGD''}];' ...
'gdat_tmp=gdat_aug(shot,params_eff);gdat_tmp.z_top=gdat_tmp.data;' ...
- 'params_eff.data_request=[{''FPG''},{''Zunt''},{''AUGD''}];' ...
- 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.z_bottom=gdat_tmp2.data;' ...
- 'gdat_tmp.data = 0.5.*(gdat_tmp2.data+gdat_tmp.data);gdat_tmp.label=''' mapping.label ''';' ...
- 'gdat_tmp.gdat_request=''' data_request ''';'];
+ 'params_eff.data_request=[{''FPG''},{''Zunt''},{''AUGD''}];' ...
+ 'gdat_tmp2=gdat_aug(shot,params_eff);gdat_tmp.z_bottom=gdat_tmp2.data;' ...
+ 'gdat_tmp.data = 0.5.*(gdat_tmp2.data+gdat_tmp.data);gdat_tmp.label=''' mapping.label ''';' ...
+ 'gdat_tmp.gdat_request=''' data_request ''';'];
- case {'zmag', 'z_mag', 'z_axis'}
- mapping.label = 'Z\_magaxis';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Zmag'},{'AUGD'}];
- %
- % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- % extra AUG cases (not necessarily in official data_request name list)
- % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- %
- case 'transp'
- mapping.label = 'transp output';
- mapping.method = 'switchcase';
+ case {'zmag', 'z_mag', 'z_axis'}
+ mapping.label = 'Z\_magaxis';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Zmag'},{'AUGD'}];
+ %
+ % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ % extra AUG cases (not necessarily in official data_request name list)
+ % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ %
+ case 'transp'
+ mapping.label = 'transp output';
+ mapping.method = 'switchcase';
- otherwise
- mapping.label = data_request;
- mapping.method = 'signal'; % assume a full tracename is given, so just try with tdi (could check there are some ":", etc...)
- mapping.expression = data_request;
- mapping.not_found = true;
+ otherwise
+ mapping.label = data_request;
+ mapping.method = 'signal'; % assume a full tracename is given, so just try with tdi (could check there are some ":", etc...)
+ mapping.expression = data_request;
+ mapping.not_found = true;
end
diff --git a/matlab/AUG/loadAUGdata.m b/matlab/AUG/loadAUGdata.m
index 94704f20f2fb47df8eb5a749409674c6e51f939d..78341cdc44d5f400ed63e6d213afcc00d9983325 100644
--- a/matlab/AUG/loadAUGdata.m
+++ b/matlab/AUG/loadAUGdata.m
@@ -3,8 +3,8 @@ function [trace,error,varargout]=loadAUGdata(shot,data_type,varargin)
% data_type:
% 'Ip' = current
% 'zmag' = vertical position of the center of the plasma (magnetic axis)
-% 'rmag' = radial position of the center of the plasma
-% 'sxr' = soft x-ray emission
+% 'rmag' = radial position of the center of the plasma
+% 'sxr' = soft x-ray emission
% 'sxR' = soft x-ray emission with varargout{1} option (requires varargin{5}!)
% 'SXB' = soft x-ray emission from (by default camera J) SXB/J_xx camera (sxb, sxB, etc all work)
% 'SXF' = soft x-ray emission from (by default camera J) SXF/I_xx camera (sxf, sxF, etc all work)
@@ -14,8 +14,8 @@ function [trace,error,varargout]=loadAUGdata(shot,data_type,varargin)
% gdat(15133,'MAG/Ipa',1,'AUG') % uses experiment=AUGD shotfiles per default
% gdat(15133,'MAG/Ipa',1) (sufficient at AUG since 'AUG' per defaut, same with gdat(15133,'ip',1)
% gdat(15133,'AUGD/MAG/Ipa',1,'AUG') % to specify experiment explicitely like in:
-% gdat(30230,'ECED/RMD/Trad-A',1,'AUG') %
-% gdat(30230,'ECED/CEC/Trad-A',1,'AUG') %
+% gdat(30230,'ECED/RMD/Trad-A',1,'AUG') %
+% gdat(30230,'ECED/CEC/Trad-A',1,'AUG') %
% gdat(31053,'MSP/IGP_07Co',1); % N gas opening at -6s (03 as well)
%
% INPUT:
@@ -36,12 +36,12 @@ function [trace,error,varargout]=loadAUGdata(shot,data_type,varargin)
% varargin{3}: zmag for varargout{1} computation
% varargin{4}: time range [t1 t2] (to limit data collected)
% varargin{5}: nth to keep only nth time points of traces
-% varargin{6}: camera to use: 'B' (default), 'A',
+% varargin{6}: camera to use: 'B' (default), 'A',
%
% OUTPUT:
% trace.data: data structure
-% trace.t: time of reference
-% trace.x: space of reference
+% trace.t: time of reference
+% trace.x: space of reference
% .... others related to data
% error: error in loading signal (0=> OK, 1=> error)
%
@@ -59,20 +59,20 @@ function [trace,error,varargout]=loadAUGdata(shot,data_type,varargin)
%
% List of keywords (can be used in adition to 'DIAG/tracenam'), with comments when not obvious:
%
-% Ip :
-% b0 :
-% zmag :
-% rmag :
-% rgeo :
-% zgeo :
-% q0 :
-% q95 :
-% kappa :
-% delta :
-% deltatop :
-% deltabot :
-% neint :
-% neterho :
+% Ip :
+% b0 :
+% zmag :
+% rmag :
+% rgeo :
+% zgeo :
+% q0 :
+% q95 :
+% kappa :
+% delta :
+% deltatop :
+% deltabot :
+% neint :
+% neterho :
% cxrs : CXRS structure from CEZ with vrot, Ti, ...
% cxrs_rho : same as cxrs but project on rho as well (using 'equil' information)
% equil : equilibrium structure, rhopol, rhotor, rhovol, etc from EQI
@@ -85,12 +85,12 @@ function [trace,error,varargout]=loadAUGdata(shot,data_type,varargin)
% sxb : 'SXB/J' chords
% sxf : 'SXF/I' chords
% transp_EXPNAME : data from TRA using experiment name = "EXPNAME"
-% ece :
-% ece_rho :
-% eced :
-% eced_rho :
-% eced_rmd :
-% Halpha :
+% ece :
+% ece_rho :
+% eced :
+% eced_rho :
+% eced_rmd :
+% Halpha :
% pgyro : for each gyrotrons, power, freq, etc (ask for more)
% powers : power traces for each sources
%
@@ -112,7 +112,7 @@ if size(data_type,1)==1
for ij=1:length(inotok)
ijk=find(iok>inotok(ij));
if ~isempty(ijk)
- iok(ijk) = iok(ijk) - 1;
+ iok(ijk) = iok(ijk) - 1;
end
end
end
@@ -285,11 +285,11 @@ end
% all keywords and corresponding case to run below
AUGkeywrdall=[{'Ip'} {'b0'} {'zmag'} {'rmag'} {'rgeo'} {'zgeo'} {'vol'} {'qrho'} {'qrho_fpp'} {'q0'} {'q95'} {'kappa'} ...
- {'delta'} {'deltatop'} {'deltabot'} {'neint'} {'ne'} {'te'} ...
- {'nerho'} {'neterho'} {'terho'} {'cxrs'} {'cxrs_rho'} {'equil'} {'equil_fpp'} {'equil_eqm'} ...
- {'equil_eqr'} {'equil_eqh'} {'sxr'} {'sxR'} {'sxb'} {'sxf'} {'ssx_g'} {'ssx_h'} {'ssx_i'} {'ssx_j'} {'ssx'} ...
- {'transp'} {'ece'} {'ece_rho'} {'eced'} {'eced_rho'} {'eced_rmd'} {'Halpha'} {'pgyro'} {'powers'} ...
- {'betan'} {'betap'}]; % rm, not yet implemented: {'rcont'} {'zcont'}
+ {'delta'} {'deltatop'} {'deltabot'} {'neint'} {'ne'} {'te'} ...
+ {'nerho'} {'neterho'} {'terho'} {'cxrs'} {'cxrs_rho'} {'equil'} {'equil_fpp'} {'equil_eqm'} ...
+ {'equil_eqr'} {'equil_eqh'} {'sxr'} {'sxR'} {'sxb'} {'sxf'} {'ssx_g'} {'ssx_h'} {'ssx_i'} {'ssx_j'} {'ssx'} ...
+ {'transp'} {'ece'} {'ece_rho'} {'eced'} {'eced_rho'} {'eced_rmd'} {'Halpha'} {'pgyro'} {'powers'} ...
+ {'betan'} {'betap'}]; % rm, not yet implemented: {'rcont'} {'zcont'}
AUGsig.iip=strmatch('Ip',AUGkeywrdall,'exact');
AUGsig.ib0=strmatch('b0',AUGkeywrdall,'exact');
AUGsig.izmag=strmatch('zmag',AUGkeywrdall,'exact');
@@ -459,8 +459,8 @@ if size(data_type_eff,1)==2
% $$$ disp('********************')
% $$$ disp('trace not yet registered.')
% $$$ disp('If standard data, ask andrea.scarabosio@epfl.ch or olivier.sauter@epfl.ch to create a keyqord entry for this data')
-% eval(['!mail -s ''' data_type_eff{1} ' ' data_type_eff{2} ' ' num2str(shot) ' ' ...
-% getenv('USER') ' AUG'' olivier.sauter@epfl.ch < /dev/null'])
+ % eval(['!mail -s ''' data_type_eff{1} ' ' data_type_eff{2} ' ' num2str(shot) ' ' ...
+ % getenv('USER') ' AUG'' olivier.sauter@epfl.ch < /dev/null'])
disp('********************')
% temporarily add entry in arrays, so can work below
index=length(AUGkeywrdall)+1;
@@ -485,7 +485,7 @@ if size(data_type_eff,1)==2
AUGsiglocation(1:2,end+1)=[data_type_eff(1) ; {data_type_eff_noext}];
AUGexplocation{end+1}=shotfile_exp;
AUGsigtimeindx(end+1)=0;
- AUGkeywrdcase{index}
+ AUGkeywrdcase{index}
end
else
index=strmatch(data_type_eff_noext,AUGkeywrdall,'exact');
@@ -506,9 +506,9 @@ else
end
disp(' ')
if iscell(data_type_eff)
- disp(['loading' ' ' data_type_eff{1} '/' data_type_eff{2} ' from AUG shot #' num2str(shot)]);
+ disp(['loading' ' ' data_type_eff{1} '/' data_type_eff{2} ' from AUG shot #' num2str(shot)]);
else
- disp(['loading' ' ' data_type_eff ' from AUG shot #' num2str(shot)]);
+ disp(['loading' ' ' data_type_eff ' from AUG shot #' num2str(shot)]);
end
disp(['case ' AUGkeywrdcase{index}])
disp(' ')
@@ -520,7 +520,7 @@ switch AUGkeywrdcase{index}
ppftype=AUGsiglocation{1,index};
shotfile_exp_eff = AUGexplocation{index};
- if i_efitm;
+ if i_efitm;
tracename=['eftm' AUGsiglocation{2,index}(5:end) name_ext];
else
tracename=[AUGsiglocation{2,index} name_ext];
@@ -528,10 +528,10 @@ switch AUGkeywrdcase{index}
ij=find(tracename~='''');
tracename=tracename(ij)
[a,e]=rdaAUG_eff(shot,ppftype,tracename,shotfile_exp_eff);
-% switch tracename
-% special cases if traces do not exist for some shot or other
-% end
-
+ % switch tracename
+ % special cases if traces do not exist for some shot or other
+ % end
+
trace=a;
clear error
error=e;
@@ -549,23 +549,23 @@ switch AUGkeywrdcase{index}
ilentime=length(trace.t);
ij=find(size(trace.value)==ilentime);
if ij==1;
- % as expected
- trace.x = [1:size(trace.value,2)];
- trace.dim=[{trace.t} ; {trace.x} ; {[1:size(trace.value,3)]}];
- trace.dimunits=[{'time [s]'} ; {''} ; {''}];
+ % as expected
+ trace.x = [1:size(trace.value,2)];
+ trace.dim=[{trace.t} ; {trace.x} ; {[1:size(trace.value,3)]}];
+ trace.dimunits=[{'time [s]'} ; {''} ; {''}];
else
- trace.dim=[{[]} ; {[]} ; {[]}];
- trace.dim{ij} = trace.t;
- trace.dimunits=[{[]} ; {[]} ; {[]}];
- trace.dimunits{ij}='time [s]';
+ trace.dim=[{[]} ; {[]} ; {[]}];
+ trace.dim{ij} = trace.t;
+ trace.dimunits=[{[]} ; {[]} ; {[]}];
+ trace.dimunits{ij}='time [s]';
end
end
trace.name=[num2str(shot) '/' ppftype '/' tracename];
-
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'sxr','sxR'}
- % LOAD MULTI CHANNEL DATA
- % load AUG soft x-ray data
+ % LOAD MULTI CHANNEL DATA
+ % load AUG soft x-ray data
shotfile_exp_eff = AUGexplocation{index};
@@ -610,7 +610,7 @@ switch AUGkeywrdcase{index}
trace.t=trace.t(1:nth:end);
trace.data=trace.data(:,1:nth:end);
trace.dim{2}=trace.t;
- % calculating intersection of the view lines with magnetics axis
+ % calculating intersection of the view lines with magnetics axis
if strcmp(data_type_eff_noext,'sxR')
if nargin>=5 & ~isempty(varargin{3})
zmag=varargin{3};
@@ -632,10 +632,10 @@ switch AUGkeywrdcase{index}
trace.R=radius;
end
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'sxb', 'sxf', 'ssx', 'ssx_g', 'ssx_h', 'ssx_i', 'ssx_j'}
% LOAD MULTI CHANNEL DATA SXB/J_0xx (or other than J camera if specified in varargin{8})
- % load AUG soft x-ray data
+ % load AUG soft x-ray data
shotfile_exp_eff = AUGexplocation{index};
@@ -670,15 +670,15 @@ switch AUGkeywrdcase{index}
tracename=varargin{6};
else
if strcmp(AUGkeywrdcase{index},'sxb')
- tracename='J';
+ tracename='J';
elseif strcmp(AUGkeywrdcase{index},'sxf')
- tracename='I';
+ tracename='I';
elseif strcmp(AUGkeywrdcase{index},'ssx')
- tracename='G';
+ tracename='G';
elseif strcmp(AUGkeywrdcase{index}(1:4),'ssx_')
- tracename=upper(AUGkeywrdcase{index}(5));
+ tracename=upper(AUGkeywrdcase{index}(5));
else
- disp('should not be here, ask O. Sauter');
+ disp('should not be here, ask O. Sauter');
end
end
trace.t=[];
@@ -688,25 +688,25 @@ switch AUGkeywrdcase{index}
for ichord=starti:endi
tracename_eff = [tracename '_' num2str(ichord,'%.3d')];
try
- [a,e]=rdaAUG_eff(shot,ppftype,tracename_eff,shotfile_exp_eff,timerange);
+ [a,e]=rdaAUG_eff(shot,ppftype,tracename_eff,shotfile_exp_eff,timerange);
catch
- a = [];
+ a = [];
end
if isempty(a) || e~=0
- if ~exist('trace_all')
- trace_all = struct([]);
- else
- end
+ if ~exist('trace_all')
+ trace_all = struct([]);
+ else
+ end
else
- if iok==0
- trace_all = a;
- trace_all = rmfield(trace_all,[{'value'},{'data'}]);
- iok = iok+1;
- else
- iok = iok+1;
- end
- trace_all.value(ichord,:) = a.value;
- trace_all.data(ichord,:) = a.data;
+ if iok==0
+ trace_all = a;
+ trace_all = rmfield(trace_all,[{'value'},{'data'}]);
+ iok = iok+1;
+ else
+ iok = iok+1;
+ end
+ trace_all.value(ichord,:) = a.value;
+ trace_all.data(ichord,:) = a.data;
end
end
if ~isempty(trace_all)
@@ -731,10 +731,10 @@ switch AUGkeywrdcase{index}
trace.units = [];
trace.name=[num2str(shot) '/' ppftype '/' tracename];
end
-
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'ece','eced','ece_rho','eced_rho'}
- % LOAD MULTI CHANNEL DATA
+ % LOAD MULTI CHANNEL DATA
% load AUG ece data
shotfile_exp_eff = AUGexplocation{index};
@@ -793,8 +793,8 @@ switch AUGkeywrdcase{index}
if domatchRtime
% interpolate R structure on ece data time array, to ease plot vs R
for i=starti:endi
- radius.data(i,:) = interp1(aR.t,aR.data(i,:),trace.t);
- zheight.data(i,:) = interp1(aZ.t,aZ.data(i,:),trace.t);
+ radius.data(i,:) = interp1(aR.t,aR.data(i,:),trace.t);
+ zheight.data(i,:) = interp1(aZ.t,aZ.data(i,:),trace.t);
end
radius.t=trace.t;
zheight.t=trace.t;
@@ -822,24 +822,24 @@ switch AUGkeywrdcase{index}
time_equil=[1.5*equil.t(1)-0.5*equil.t(2) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) 1.5*equil.t(end)-0.5*equil.t(end-1)];
iok=find(aR.data(:,1)>0);
for itequil=1:length(time_equil)-1
- rr=equil.Rmesh(:,itequil);
- zz=equil.Zmesh(:,itequil);
- psirz_in = equil.psi2D(:,:,itequil);
- it_ece_inequil = find(trace.R.t>=time_equil(itequil) & trace.R.t<=time_equil(itequil+1));
- if ~isempty(it_ece_inequil)
- rout=trace.R.data(iok,it_ece_inequil);
- ijok=find(~isnan(rout));
- if ~isempty(ijok)
- zout=trace.Z.data(iok,it_ece_inequil);
- psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout,zout);
- psi_out(iok,it_ece_inequil) = reshape(psi_at_routzout,length(iok),length(it_ece_inequil));
- rhopsinorm_out(iok,it_ece_inequil) = sqrt(abs((psi_out(iok,it_ece_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil))));
- for it_cx=1:length(it_ece_inequil)
- rhotornorm_out(iok,it_ece_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out(iok,it_ece_inequil(it_cx)),-3,[2 2],[0 1]);
- rhovolnorm_out(iok,it_ece_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out(iok,it_ece_inequil(it_cx)),-3,[2 2],[0 1]);
- end
- end
- end
+ rr=equil.Rmesh(:,itequil);
+ zz=equil.Zmesh(:,itequil);
+ psirz_in = equil.psi2D(:,:,itequil);
+ it_ece_inequil = find(trace.R.t>=time_equil(itequil) & trace.R.t<=time_equil(itequil+1));
+ if ~isempty(it_ece_inequil)
+ rout=trace.R.data(iok,it_ece_inequil);
+ ijok=find(~isnan(rout));
+ if ~isempty(ijok)
+ zout=trace.Z.data(iok,it_ece_inequil);
+ psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout,zout);
+ psi_out(iok,it_ece_inequil) = reshape(psi_at_routzout,length(iok),length(it_ece_inequil));
+ rhopsinorm_out(iok,it_ece_inequil) = sqrt(abs((psi_out(iok,it_ece_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil))));
+ for it_cx=1:length(it_ece_inequil)
+ rhotornorm_out(iok,it_ece_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out(iok,it_ece_inequil(it_cx)),-3,[2 2],[0 1]);
+ rhovolnorm_out(iok,it_ece_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out(iok,it_ece_inequil(it_cx)),-3,[2 2],[0 1]);
+ end
+ end
+ end
end
trace.rhos.psi_on_rztime = psi_out;
trace.rhos.rhopsinorm_on_rztime = rhopsinorm_out;
@@ -848,10 +848,10 @@ switch AUGkeywrdcase{index}
trace.rhos.t = trace.R.t;
end
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'cxrs', 'cxrs_rho'}
% LOAD CEZ data
- %
+ %
shotfile_exp_eff = AUGexplocation{index};
@@ -889,39 +889,39 @@ switch AUGkeywrdcase{index}
cxrs.ti_c.error = aerr.value;
%
if strcmp(AUGkeywrdcase{index},'cxrs_rho')
- equil=gdat(shot,'equil',0);
- inb_chord_cxrs=size(cxrs.r_time,1);
- inb_time_cxrs=size(cxrs.r_time,2);
- psi_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- rhopsinorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- rhotornorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- rhovolnorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
- time_equil=[1.5*equil.t(1)-0.5*equil.t(2) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) 1.5*equil.t(end)-0.5*equil.t(end-1)];
- iok=find(cxrs.r_time(:,1)>0);
- for itequil=1:length(time_equil)-1
- rr=equil.Rmesh(:,itequil);
- zz=equil.Zmesh(:,itequil);
- psirz_in = equil.psi2D(:,:,itequil);
- it_cxrs_inequil = find(cxrs.t>=time_equil(itequil) & cxrs.t<=time_equil(itequil+1));
- if ~isempty(it_cxrs_inequil)
- rout=cxrs.r_time(iok,it_cxrs_inequil);
- zout=cxrs.z_time(iok,it_cxrs_inequil);
- psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout,zout);
- psi_out(iok,it_cxrs_inequil) = reshape(psi_at_routzout,length(iok),length(it_cxrs_inequil));
- rhopsinorm_out(iok,it_cxrs_inequil) = sqrt((psi_out(iok,it_cxrs_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
- for it_cx=1:length(it_cxrs_inequil)
- rhotornorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
- rhovolnorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
- end
- end
- end
- cxrs.psi_on_rztime = psi_out;
- cxrs.rhopsinorm_on_rztime = rhopsinorm_out;
- cxrs.rhotornorm_on_rztime = rhotornorm_out;
- cxrs.rhovolnorm_on_rztime = rhovolnorm_out;
+ equil=gdat(shot,'equil',0);
+ inb_chord_cxrs=size(cxrs.r_time,1);
+ inb_time_cxrs=size(cxrs.r_time,2);
+ psi_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ rhopsinorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ rhotornorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ rhovolnorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
+ time_equil=[1.5*equil.t(1)-0.5*equil.t(2) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) 1.5*equil.t(end)-0.5*equil.t(end-1)];
+ iok=find(cxrs.r_time(:,1)>0);
+ for itequil=1:length(time_equil)-1
+ rr=equil.Rmesh(:,itequil);
+ zz=equil.Zmesh(:,itequil);
+ psirz_in = equil.psi2D(:,:,itequil);
+ it_cxrs_inequil = find(cxrs.t>=time_equil(itequil) & cxrs.t<=time_equil(itequil+1));
+ if ~isempty(it_cxrs_inequil)
+ rout=cxrs.r_time(iok,it_cxrs_inequil);
+ zout=cxrs.z_time(iok,it_cxrs_inequil);
+ psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout,zout);
+ psi_out(iok,it_cxrs_inequil) = reshape(psi_at_routzout,length(iok),length(it_cxrs_inequil));
+ rhopsinorm_out(iok,it_cxrs_inequil) = sqrt((psi_out(iok,it_cxrs_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
+ for it_cx=1:length(it_cxrs_inequil)
+ rhotornorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
+ rhovolnorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
+ end
+ end
+ end
+ cxrs.psi_on_rztime = psi_out;
+ cxrs.rhopsinorm_on_rztime = rhopsinorm_out;
+ cxrs.rhotornorm_on_rztime = rhotornorm_out;
+ cxrs.rhovolnorm_on_rztime = rhovolnorm_out;
end
-
+
trace = cxrs;
else
trace.data = [];
@@ -932,9 +932,9 @@ switch AUGkeywrdcase{index}
trace.units = [];
trace.name=[num2str(shot) '/' ppftype '/' 'vrot, Ti_c,...'];
end
-
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
- case {'neterho'} % 'nerho', 'terho',
+
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+ case {'neterho'} % 'nerho', 'terho',
% LOAD VTA data
% Vertical Thomson core and edge
@@ -943,7 +943,7 @@ switch AUGkeywrdcase{index}
trace.t=[];
trace.x=[];
ppftype='VTA';
- % if strcmp(AUGkeywrdcase{index},'terho')
+ % if strcmp(AUGkeywrdcase{index},'terho')
[a,e]=rdaAUG_eff(shot,ppftype,'Te_c',shotfile_exp_eff);
if isempty(a) || e~=0
thomson = struct([]);
@@ -997,67 +997,67 @@ switch AUGkeywrdcase{index}
thomson.z_edge_time = z_time.value' * ones(1,size(thomson.te_edge.value,2));
%
if strcmp(AUGkeywrdcase{index},'neterho')
- equil=gdat(shot,'equil',0);
- % core
- inb_chord_thomson_core=size(thomson.r_core_time,1);
- inb_time_thomson_core=size(thomson.r_core_time,2);
- psi_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
- rhopsinorm_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
- rhotornorm_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
- rhovolnorm_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
- % edge
- inb_chord_thomson_edge=size(thomson.r_edge_time,1);
- inb_time_thomson_edge=size(thomson.r_edge_time,2);
- psi_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
- rhopsinorm_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
- rhotornorm_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
- rhovolnorm_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
- % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
- time_equil=[1.5*equil.t(1)-0.5*equil.t(2) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) 1.5*equil.t(end)-0.5*equil.t(end-1)];
- for itequil=1:length(time_equil)-1
- rr=equil.Rmesh(:,itequil);
- zz=equil.Zmesh(:,itequil);
- psirz_in = equil.psi2D(:,:,itequil);
- it_thomson_core_inequil = find(thomson.time_core>=time_equil(itequil) & thomson.time_core<=time_equil(itequil+1));
- if ~isempty(it_thomson_core_inequil)
- rout_core=thomson.r_core_time(:,it_thomson_core_inequil);
- zout_core=thomson.z_core_time(:,it_thomson_core_inequil);
- psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_core,zout_core);
- psi_out_core(:,it_thomson_core_inequil) = reshape(psi_at_routzout,inb_chord_thomson_core,length(it_thomson_core_inequil));
- rhopsinorm_out_core(:,it_thomson_core_inequil) = sqrt((psi_out_core(:,it_thomson_core_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
- for it_cx=1:length(it_thomson_core_inequil)
- rhotornorm_out_core(:,it_thomson_core_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out_core(:,it_thomson_core_inequil(it_cx)),-3,[2 2],[0 1]);
- rhovolnorm_out_core(:,it_thomson_core_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out_core(:,it_thomson_core_inequil(it_cx)),-3,[2 2],[0 1]);
- end
- end
- % edge
- it_thomson_edge_inequil = find(thomson.time_edge>=time_equil(itequil) & thomson.time_edge<=time_equil(itequil+1));
- if ~isempty(it_thomson_edge_inequil)
- rout_edge=thomson.r_edge_time(:,it_thomson_edge_inequil);
- zout_edge=thomson.z_edge_time(:,it_thomson_edge_inequil);
- psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_edge,zout_edge);
- psi_out_edge(:,it_thomson_edge_inequil) = reshape(psi_at_routzout,inb_chord_thomson_edge,length(it_thomson_edge_inequil));
- rhopsinorm_out_edge(:,it_thomson_edge_inequil) = sqrt((psi_out_edge(:,it_thomson_edge_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
- for it_cx=1:length(it_thomson_edge_inequil)
- rhotornorm_out_edge(:,it_thomson_edge_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out_edge(:,it_thomson_edge_inequil(it_cx)),-3,[2 2],[0 1]);
- rhovolnorm_out_edge(:,it_thomson_edge_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out_edge(:,it_thomson_edge_inequil(it_cx)),-3,[2 2],[0 1]);
- end
- end
- end
- thomson.core_psi_on_rztime = psi_out_core;
- thomson.core_rhopsinorm_on_rztime = rhopsinorm_out_core;
- thomson.core_rhotornorm_on_rztime = rhotornorm_out_core;
- thomson.core_rhovolnorm_on_rztime = rhovolnorm_out_core;
- thomson.edge_psi_on_rztime = psi_out_edge;
- thomson.edge_rhopsinorm_on_rztime = rhopsinorm_out_edge;
- thomson.edge_rhotornorm_on_rztime = rhotornorm_out_edge;
- thomson.edge_rhovolnorm_on_rztime = rhovolnorm_out_edge;
+ equil=gdat(shot,'equil',0);
+ % core
+ inb_chord_thomson_core=size(thomson.r_core_time,1);
+ inb_time_thomson_core=size(thomson.r_core_time,2);
+ psi_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
+ rhopsinorm_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
+ rhotornorm_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
+ rhovolnorm_out_core = NaN*ones(inb_chord_thomson_core,inb_time_thomson_core);
+ % edge
+ inb_chord_thomson_edge=size(thomson.r_edge_time,1);
+ inb_time_thomson_edge=size(thomson.r_edge_time,2);
+ psi_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
+ rhopsinorm_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
+ rhotornorm_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
+ rhovolnorm_out_edge = NaN*ones(inb_chord_thomson_edge,inb_time_thomson_edge);
+ % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
+ time_equil=[1.5*equil.t(1)-0.5*equil.t(2) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) 1.5*equil.t(end)-0.5*equil.t(end-1)];
+ for itequil=1:length(time_equil)-1
+ rr=equil.Rmesh(:,itequil);
+ zz=equil.Zmesh(:,itequil);
+ psirz_in = equil.psi2D(:,:,itequil);
+ it_thomson_core_inequil = find(thomson.time_core>=time_equil(itequil) & thomson.time_core<=time_equil(itequil+1));
+ if ~isempty(it_thomson_core_inequil)
+ rout_core=thomson.r_core_time(:,it_thomson_core_inequil);
+ zout_core=thomson.z_core_time(:,it_thomson_core_inequil);
+ psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_core,zout_core);
+ psi_out_core(:,it_thomson_core_inequil) = reshape(psi_at_routzout,inb_chord_thomson_core,length(it_thomson_core_inequil));
+ rhopsinorm_out_core(:,it_thomson_core_inequil) = sqrt((psi_out_core(:,it_thomson_core_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
+ for it_cx=1:length(it_thomson_core_inequil)
+ rhotornorm_out_core(:,it_thomson_core_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out_core(:,it_thomson_core_inequil(it_cx)),-3,[2 2],[0 1]);
+ rhovolnorm_out_core(:,it_thomson_core_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out_core(:,it_thomson_core_inequil(it_cx)),-3,[2 2],[0 1]);
+ end
+ end
+ % edge
+ it_thomson_edge_inequil = find(thomson.time_edge>=time_equil(itequil) & thomson.time_edge<=time_equil(itequil+1));
+ if ~isempty(it_thomson_edge_inequil)
+ rout_edge=thomson.r_edge_time(:,it_thomson_edge_inequil);
+ zout_edge=thomson.z_edge_time(:,it_thomson_edge_inequil);
+ psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_edge,zout_edge);
+ psi_out_edge(:,it_thomson_edge_inequil) = reshape(psi_at_routzout,inb_chord_thomson_edge,length(it_thomson_edge_inequil));
+ rhopsinorm_out_edge(:,it_thomson_edge_inequil) = sqrt((psi_out_edge(:,it_thomson_edge_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
+ for it_cx=1:length(it_thomson_edge_inequil)
+ rhotornorm_out_edge(:,it_thomson_edge_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopsinorm_out_edge(:,it_thomson_edge_inequil(it_cx)),-3,[2 2],[0 1]);
+ rhovolnorm_out_edge(:,it_thomson_edge_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopsinorm_out_edge(:,it_thomson_edge_inequil(it_cx)),-3,[2 2],[0 1]);
+ end
+ end
+ end
+ thomson.core_psi_on_rztime = psi_out_core;
+ thomson.core_rhopsinorm_on_rztime = rhopsinorm_out_core;
+ thomson.core_rhotornorm_on_rztime = rhotornorm_out_core;
+ thomson.core_rhovolnorm_on_rztime = rhovolnorm_out_core;
+ thomson.edge_psi_on_rztime = psi_out_edge;
+ thomson.edge_rhopsinorm_on_rztime = rhopsinorm_out_edge;
+ thomson.edge_rhotornorm_on_rztime = rhotornorm_out_edge;
+ thomson.edge_rhovolnorm_on_rztime = rhovolnorm_out_edge;
end
-
+
trace = thomson;
else
trace.data = [];
@@ -1068,12 +1068,12 @@ switch AUGkeywrdcase{index}
trace.units = [];
trace.name=[num2str(shot) '/' ppftype '/' tracename];
end
-
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'te', 'ne'}
shotfile_exp_eff = AUGexplocation{index}
-
+
if strcmp(AUGkeywrdcase{index},'te')
[a,e]=rdaAUG_eff(shot,'YPR','Te',shotfile_exp_eff);
else
@@ -1091,9 +1091,9 @@ switch AUGkeywrdcase{index}
% In shotfiles time is 1st index in 2D arrays while gdat convention is to have time as last dimension
% so change equil.xxx to (rho,time) on the way...
-
+
shotfile_exp_eff = AUGexplocation{index};
-
+
if strcmp(AUGkeywrdcase{index},'equil_fpp') || strcmp(AUGkeywrdcase{index},'qrho_fpp')
DIAG = 'FPP';
elseif strcmp(AUGkeywrdcase{index},'equil_eqm')
@@ -1193,9 +1193,9 @@ switch AUGkeywrdcase{index}
ijok=find(qpsi.value(:,1)); % note: eqr fills in only odd points radially
% set NaNs to zeroes
if qpsi.value(ijok(1),1)<0
- equil.qvalue(:,it) = max(qpsi.value(it,Lpf1:-1:1)',-max_qValue);
+ equil.qvalue(:,it) = max(qpsi.value(it,Lpf1:-1:1)',-max_qValue);
else
- equil.qvalue(:,it) = min(qpsi.value(it,Lpf1:-1:1)',max_qValue);
+ equil.qvalue(:,it) = min(qpsi.value(it,Lpf1:-1:1)',max_qValue);
end
% get x values
equil.psi(:,it)=psi_tree.value(it,Lpf1:-1:1)';
@@ -1203,74 +1203,74 @@ switch AUGkeywrdcase{index}
equil.psi_lcfs(it)= equil.psi(end,it);
equil.rhopolnorm(:,it) = sqrt(abs((equil.psi(:,it)-equil.psi_axis(it)) ./(equil.psi_lcfs(it)-equil.psi_axis(it))));
if strcmp(DIAG,'EQR');
- % q value has only a few values and from center to edge, assume they are from central rhopol values on
- % But they are every other point starting from 3rd
- ijk=find(equil.qvalue(:,it)~=0);
- if length(ijk)>2
- % now shots have non-zero axis values in eqr
- rhoeff=equil.rhopolnorm(ijk,it);
- qeff=equil.qvalue(ijk,it); % radial order was already inverted above
- if ijk(1)>1
- rhoeff = [0.; rhoeff];
- qeff = [qeff(1) ;qeff];
- end
- ij_nonan=find(~isnan(equil.rhopolnorm(:,it)));
- qfit = zeros(size(equil.rhopolnorm(:,it)));
- qfit(ij_nonan)=interpos(rhoeff,qeff,equil.rhopolnorm(ij_nonan,it),-0.01,[1 0],[0 0],[300; ones(size(qeff(1:end-1)))]);
- else
- qfit = zeros(size(equil.rhopolnorm(:,it)));
- end
- equil.qvalue(:,it) = qfit;
- end
+ % q value has only a few values and from center to edge, assume they are from central rhopol values on
+ % But they are every other point starting from 3rd
+ ijk=find(equil.qvalue(:,it)~=0);
+ if length(ijk)>2
+ % now shots have non-zero axis values in eqr
+ rhoeff=equil.rhopolnorm(ijk,it);
+ qeff=equil.qvalue(ijk,it); % radial order was already inverted above
+ if ijk(1)>1
+ rhoeff = [0.; rhoeff];
+ qeff = [qeff(1) ;qeff];
+ end
+ ij_nonan=find(~isnan(equil.rhopolnorm(:,it)));
+ qfit = zeros(size(equil.rhopolnorm(:,it)));
+ qfit(ij_nonan)=interpos(rhoeff,qeff,equil.rhopolnorm(ij_nonan,it),-0.01,[1 0],[0 0],[300; ones(size(qeff(1:end-1)))]);
+ else
+ qfit = zeros(size(equil.rhopolnorm(:,it)));
+ end
+ equil.qvalue(:,it) = qfit;
+ end
% get rhotor values
equil.phi(:,it) = phi_tree.value(it,Lpf1:-1:1)';
equil.rhotornorm(:,it) = sqrt(abs(equil.phi(:,it) ./ equil.phi(end,it)));
% get rhovol values
- equil.vol(:,it)=Vol.value(it,2*Lpf1-1:-2:1)';
+ equil.vol(:,it)=Vol.value(it,2*Lpf1-1:-2:1)';
equil.dvoldpsi(:,it)=Vol.value(it,2*Lpf1:-2:2)'; % 2nd index are dV/dpsi
equil.rhovolnorm(:,it) = sqrt(abs(equil.vol(:,it) ./ equil.vol(end,it)));
- equil.area(:,it)=Area.value(it,2*Lpf1-1:-2:1)';
+ equil.area(:,it)=Area.value(it,2*Lpf1-1:-2:1)';
equil.dareadpsi(:,it)=Area.value(it,2*Lpf1:-2:2)'; % 2nd index are dV/dpsi
equil.Rmesh(:,it) = Ri.value(it,1:M_Rmesh);
equil.Zmesh(:,it) = Zj.value(it,1:N_Zmesh);
equil.psi2D(1:M_Rmesh,1:N_Zmesh,it) = PFM_tree.value(1:M_Rmesh,1:N_Zmesh,it);
- equil.pressure(:,it)=Pres.value(it,2*Lpf1-1:-2:1)';
+ equil.pressure(:,it)=Pres.value(it,2*Lpf1-1:-2:1)';
equil.dpressuredpsi(:,it)=Pres.value(it,2*Lpf1:-2:2)'; % 2nd index are dV/dpsi
if ~isempty(Jpol.value)
- equil.jpol(:,it)=Jpol.value(it,2*Lpf1-1:-2:1)';
- equil.djpolpsi(:,it)=Jpol.value(it,2*Lpf1:-2:2)'; % 2nd index are dV/dpsi
+ equil.jpol(:,it)=Jpol.value(it,2*Lpf1-1:-2:1)';
+ equil.djpolpsi(:,it)=Jpol.value(it,2*Lpf1:-2:2)'; % 2nd index are dV/dpsi
else
- equil.jpol = [];
- equil.djpolpsi = [];
+ equil.jpol = [];
+ equil.djpolpsi = [];
end
equil.ffprime(:,it) = FFP.value(it,Lpf1:-1:1)';
equil.Xpoints.psi(1:LPFx.value(it)+1,it) = PFxx.value(it,1:LPFx.value(it)+1);
equil.Xpoints.Rvalue(1:LPFx.value(it)+1,it) = RPFx.value(it,1:LPFx.value(it)+1);
equil.Xpoints.Zvalue(1:LPFx.value(it)+1,it) = zPFx.value(it,1:LPFx.value(it)+1);
if ~isempty(Rinv.value)
- equil.rinv(:,it) = Rinv.value(it,Lpf1:-1:1)';
+ equil.rinv(:,it) = Rinv.value(it,Lpf1:-1:1)';
else
- equil.rinv = [];
+ equil.rinv = [];
end
if ~isempty(R2inv.value)
- equil.r2inv(:,it) = R2inv.value(it,Lpf1:-1:1)';
+ equil.r2inv(:,it) = R2inv.value(it,Lpf1:-1:1)';
else
- equil.r2inv = [];
+ equil.r2inv = [];
end
if ~isempty(Bave.value)
- equil.bave(:,it) = Bave.value(it,Lpf1:-1:1)';
+ equil.bave(:,it) = Bave.value(it,Lpf1:-1:1)';
else
- equil.bave = [];
+ equil.bave = [];
end
if ~isempty(B2ave.value)
- equil.b2ave(:,it) = B2ave.value(it,Lpf1:-1:1)';
+ equil.b2ave(:,it) = B2ave.value(it,Lpf1:-1:1)';
else
- equil.b2ave = [];
+ equil.b2ave = [];
end
if ~isempty(FTRA.value)
- equil.ftra(:,it) = FTRA.value(it,Lpf1:-1:1)';
+ equil.ftra(:,it) = FTRA.value(it,Lpf1:-1:1)';
else
- equil.ftra = [];
+ equil.ftra = [];
end
%
end
@@ -1297,10 +1297,10 @@ switch AUGkeywrdcase{index}
trace.dimunits{1} = '';
trace.dimunits{2} = 's';
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'pgyro'}
% LOAD MULTI CHANNEL DATA ECS
- % powers, frequencies, etc
+ % powers, frequencies, etc
shotfile_exp_eff = AUGexplocation{index};
@@ -1324,94 +1324,94 @@ switch AUGkeywrdcase{index}
[a,e]=rdaAUG_eff(shot,ppftype,tracename_eff,shotfile_exp_eff);
if isempty(a) || e~=0
else
- trace_all.ecrh1(i) = a;
- trace_all.pgyro(:,i) = reshape(a.data,nb_timepoints,1);
+ trace_all.ecrh1(i) = a;
+ trace_all.pgyro(:,i) = reshape(a.data,nb_timepoints,1);
end
try
- a = sf2par('ECS',shot,'gyr_freq',['P_sy1_g' num2str(i)]);
+ a = sf2par('ECS',shot,'gyr_freq',['P_sy1_g' num2str(i)]);
catch
- % gyr_freq not present (old shots for example)
- a=[];
+ % gyr_freq not present (old shots for example)
+ a=[];
end
if isempty(a)
else
- trace_all.freq_ecrh1(i) = a;
- trace_all.freq_ech(i) = a.value;
+ trace_all.freq_ecrh1(i) = a;
+ trace_all.freq_ech(i) = a.value;
end
try
- a = sf2par('ECS',shot,'GPolPos',['P_sy1_g' num2str(i)]);
+ a = sf2par('ECS',shot,'GPolPos',['P_sy1_g' num2str(i)]);
catch
- % GPolPos not present
- a=[];
+ % GPolPos not present
+ a=[];
end
if isempty(a)
else
- trace_all.polpos_ecs(i) = a.value;
+ trace_all.polpos_ecs(i) = a.value;
end
try
- a = sf2par('ECS',shot,'GTorPos',['P_sy1_g' num2str(i)]);
+ a = sf2par('ECS',shot,'GTorPos',['P_sy1_g' num2str(i)]);
catch
- a=[];
+ a=[];
end
if isempty(a)
else
- trace_all.torpos_ecs(i) = a.value;
+ trace_all.torpos_ecs(i) = a.value;
end
% "new" ECRH2 gyrotrons: gyro 5 to 8 in pgyro
tracename_eff = ['PG' num2str(i) 'N'];
[a,e]=rdaAUG_eff(shot,ppftype,tracename_eff,shotfile_exp_eff);
if isempty(a) || e~=0
else
- trace_all.ecrh2(i) = a;
- trace_all.pgyro(:,i+4) = reshape(a.data,nb_timepoints,1);
+ trace_all.ecrh2(i) = a;
+ trace_all.pgyro(:,i+4) = reshape(a.data,nb_timepoints,1);
end
try
- a = sf2par('ECS',shot,'gyr_freq',['P_sy2_g' num2str(i)]);
+ a = sf2par('ECS',shot,'gyr_freq',['P_sy2_g' num2str(i)]);
catch
- a=[];
+ a=[];
end
if isempty(a)
else
- trace_all.freq_ecrh2(i) = a;
- trace_all.freq_ech(i+4) = a.value;
+ trace_all.freq_ecrh2(i) = a;
+ trace_all.freq_ech(i+4) = a.value;
end
try
- a = sf2par('ECS',shot,'GPolPos',['P_sy2_g' num2str(i)]);
+ a = sf2par('ECS',shot,'GPolPos',['P_sy2_g' num2str(i)]);
catch
- a=[];
+ a=[];
end
if isempty(a)
else
- trace_all.polpos_ecs(i+4) = a.value;
+ trace_all.polpos_ecs(i+4) = a.value;
end
try
- a = sf2par('ECS',shot,'GTorPos',['P_sy2_g' num2str(i)]);
+ a = sf2par('ECS',shot,'GTorPos',['P_sy2_g' num2str(i)]);
catch
- a=[];
+ a=[];
end
if isempty(a)
else
- trace_all.torpos_ecs(i+4) = a.value;
+ trace_all.torpos_ecs(i+4) = a.value;
end
[a,e]=rdaAUG_eff(shot,'ECN',['G' num2str(i) 'POL'],shotfile_exp_eff);
if isempty(a) || e~=0
else
- trace_all.gpol_ecn(i+4) = a;
+ trace_all.gpol_ecn(i+4) = a;
end
[a,e]=rdaAUG_eff(shot,'ECN',['G' num2str(i) 'TOR'],shotfile_exp_eff);
if isempty(a) || e~=0
else
- trace_all.gtor_ecn(i+4) = a;
+ trace_all.gtor_ecn(i+4) = a;
end
[a,e]=rdaAUG_eff(shot,'ECN',['G' num2str(i) 'PO4'],shotfile_exp_eff);
if isempty(a) || e~=0
else
- trace_all.gpo4_ecn(i+4) = a;
+ trace_all.gpo4_ecn(i+4) = a;
end
[a,e]=rdaAUG_eff(shot,'ECN',['G' num2str(i) 'PO8'],shotfile_exp_eff);
if isempty(a) || e~=0
else
- trace_all.gpo8_ecn(i+4) = a;
+ trace_all.gpo8_ecn(i+4) = a;
end
end
if ~isempty(trace_all)
@@ -1431,13 +1431,13 @@ switch AUGkeywrdcase{index}
trace.t = [];
trace.units = [];
trace.freq_ech_units =[]';
- trace.name=[num2str(shot) '/' ppftype '/' 'PGi and PGiN'];
+ trace.name=[num2str(shot) '/' ppftype '/' 'PGi and PGiN'];
end
-
- %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'powers'}
% load powers from TOT timebase as well
- %
+ %
shotfile_exp_eff = AUGexplocation{index};
@@ -1519,10 +1519,10 @@ switch AUGkeywrdcase{index}
trace.t = [];
trace.units = [];
trace.freq_ech_units =[]';
- trace.name=[num2str(shot) '/' ppftype '/' 'P_OH, PNBI_TOT, PECR_TOT, PICR_TOT'];
+ trace.name=[num2str(shot) '/' ppftype '/' 'P_OH, PNBI_TOT, PECR_TOT, PICR_TOT'];
end
-%&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
+ %&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
case {'transp'} % for TRANSP
% LOAD TRA data into substructures
shotfile_exp_eff = AUGexplocation{index}
@@ -1535,31 +1535,31 @@ switch AUGkeywrdcase{index}
TRANSP_signals;
for i=1:size(transp_sig,1)
if strcmp(lower(transp_sig{i,2}),'signal') || strcmp(lower(transp_sig{i,2}),'signal-group')
- try
- eval(['[trace.' transp_sig{i,1} ',e]=rdaAUG_eff(shot,ppftype,''' transp_sig{i,1} ''',shotfile_exp_eff);']);
- catch
- eval(['trace.' transp_sig{i,1} '=[];']);
- end
+ try
+ eval(['[trace.' transp_sig{i,1} ',e]=rdaAUG_eff(shot,ppftype,''' transp_sig{i,1} ''',shotfile_exp_eff);']);
+ catch
+ eval(['trace.' transp_sig{i,1} '=[];']);
+ end
elseif strcmp(lower(transp_sig{i,2}),'area-base')
- clear adata_area
- try
- [adata_area]=sf2ab(ppftype,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
- catch
- adata_area.value = cell(0);
- end
- eval(['trace.' transp_sig{i,1} '=adata_area;']);
+ clear adata_area
+ try
+ [adata_area]=sf2ab(ppftype,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
+ catch
+ adata_area.value = cell(0);
+ end
+ eval(['trace.' transp_sig{i,1} '=adata_area;']);
elseif strcmp(lower(transp_sig{i,2}),'time-base')
- clear adata_time
- try
- [adata_time]=sf2tb(ppftype,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
- catch
- adata_time.value = cell(0);
- end
- eval(['trace.' transp_sig{i,1} '=adata_time;']);
+ clear adata_time
+ try
+ [adata_time]=sf2tb(ppftype,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
+ catch
+ adata_time.value = cell(0);
+ end
+ eval(['trace.' transp_sig{i,1} '=adata_time;']);
end
end
otherwise
disp('case not yet defined')
-
+
end
diff --git a/matlab/AUG/plot_torbeam.m b/matlab/AUG/plot_torbeam.m
index 2943eb9056773eab5fcb6eecfdb8e3347b60057b..a8a0955c133cba958da8eb176db0183a1d56481e 100644
--- a/matlab/AUG/plot_torbeam.m
+++ b/matlab/AUG/plot_torbeam.m
@@ -28,7 +28,7 @@ if nargin >= 2
h_for_waitfor=figure;
global field_chosen
h1=uicontrol('Style','listbox','string',tb_fields,'pos',[20 20 200 300],'Max',20, ...
- 'callback', ['global field_chosen;field_chosen=get(gcbo,''value'') ;']);
+ 'callback', ['global field_chosen;field_chosen=get(gcbo,''value'') ;']);
h2=uicontrol('Style','text','pos',[20 330 200 30],'string','choose fields to plot (ctrl-enter for multiple choices) then quit');
h3=uicontrol('Style','pushbutton','string','quit','pos',[300 20 30 20],'callback', ['close gcf;']);
waitfor(h_for_waitfor);
diff --git a/matlab/AUG/rdaAUG_eff.m b/matlab/AUG/rdaAUG_eff.m
index d1ac063d39559dd2bee11f50758cffaf606ad2c8..e023ab44a0b16e22b32d6d2f24cc63afe63c61b6 100644
--- a/matlab/AUG/rdaAUG_eff.m
+++ b/matlab/AUG/rdaAUG_eff.m
@@ -90,15 +90,15 @@ time_base=false;
time_base_name=[];
time_base_dimof=[];
if nargin_eff>=7 && ~isempty(varargin_eff{3}) && ischar(varargin_eff{3}) ...
- && length(varargin_eff{3})>=7 && strcmp(lower(varargin_eff{3}(1:6)),'param:')
+ && length(varargin_eff{3})>=7 && strcmp(lower(varargin_eff{3}(1:6)),'param:')
param_name=varargin_eff{3}(7:end);
end
if nargin_eff>=7 && ~isempty(varargin_eff{3}) && ischar(varargin_eff{3}) ...
- && length(varargin_eff{3})>=11 && strcmp(lower(varargin_eff{3}(1:10)),'param-set:')
+ && length(varargin_eff{3})>=11 && strcmp(lower(varargin_eff{3}(1:10)),'param-set:')
param_set_name=varargin_eff{3}(11:end);
end
if nargin_eff>=7 && ~isempty(varargin_eff{3}) && ischar(varargin_eff{3}) ...
- && length(varargin_eff{3})>=9 && strcmp(lower(varargin_eff{3}(1:9)),'area-base')
+ && length(varargin_eff{3})>=9 && strcmp(lower(varargin_eff{3}(1:9)),'area-base')
area_base = true;
ij=findstr(varargin_eff{3},':');
if length(ij)==2
@@ -109,7 +109,7 @@ if nargin_eff>=7 && ~isempty(varargin_eff{3}) && ischar(varargin_eff{3}) ...
end
end
if nargin_eff>=7 && ~isempty(varargin_eff{3}) && ischar(varargin_eff{3}) ...
- && length(varargin_eff{3})>=9 && strcmp(lower(varargin_eff{3}(1:9)),'time-base')
+ && length(varargin_eff{3})>=9 && strcmp(lower(varargin_eff{3}(1:9)),'time-base')
time_base = true;
ij=findstr(varargin_eff{3},':');
if length(ij)==2
@@ -166,7 +166,7 @@ if usemdsplus
if isempty(param_name) && isempty(param_set_name) && ~area_base && ~time_base
% use augsignal to get effective layout as in ISIS and sf2sig, for example for EQI/PFM
eval(['[data,error]=mdsvalue(''_rdaeff' user diagname '=augsignal(' num2str(shot) ',"' diagname '","' sigtype '","' shotfile_exp ...
- '",' ed_number ',' tstart ',' tend ',_oshot' user diagname ',_oed' user diagname ',' ask_raw ')'');']);
+ '",' ed_number ',' tstart ',' tend ',_oshot' user diagname ',_oed' user diagname ',' ask_raw ')'');']);
if isnumeric(data)
data=double(data);
end
@@ -242,42 +242,42 @@ if usemdsplus
if prod(ss)==length(data); nbofdim=1; end
nbofdim=max(nbofdim,1);
switch nbofdim
- case 1
- adata.data=reshape(adata.data,1,length(adata.data));
- idim0 = 0;
- eval(['time=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(idim0) ')'');']);
- if numel(time) ~= numel(adata.data)
- idim0 = 1;
+ case 1
+ adata.data=reshape(adata.data,1,length(adata.data));
+ idim0 = 0;
eval(['time=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(idim0) ')'');']);
- if numel(time) ~= numel(adata.data) && (ischar(adata.data) && isempty(strfind(lower(adata.data),'abort')))
- warning(['problem with dim for: ' diagname ', ' sigtype])
+ if numel(time) ~= numel(adata.data)
+ idim0 = 1;
+ eval(['time=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(idim0) ')'');']);
+ if numel(time) ~= numel(adata.data) && (ischar(adata.data) && isempty(strfind(lower(adata.data),'abort')))
+ warning(['problem with dim for: ' diagname ', ' sigtype])
+ end
end
- end
- time = reshape(time,1,length(time));
- x=[];
- adata.dim = {time};
- eval(['tunits=mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(idim0) '))'');']);
- adata.dimunits = {tunits};
- case 2
- if strcmp(upper(diagname),'IDA') && ~usemdsplus
- % rho, time in original dimension, so do not transpose (seems different with mdsplus... to check)
- idim_x = 0;
- idim_t = 1;
- else
- adata.data = adata.data';
- did_transpose = 1;
- idim_x = 1;
- idim_t = 0;
- end
- % transposed because of C relation and backward compatibility with sf2sig part
- eval(['x=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(idim_x) ')'');']);
- if prod(size(x))==length(x); x = reshape(x,1,length(x)); end
- eval(['time=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(idim_t) ')'');']);
- time = reshape(time,1,length(time));
- adata.dim = {x, time};
- eval(['xunits=deblank(mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(idim_x) '))''));']);
- eval(['tunits=deblank(mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(idim_t) '))''));']);
- adata.dimunits = {xunits, tunits};
+ time = reshape(time,1,length(time));
+ x=[];
+ adata.dim = {time};
+ eval(['tunits=mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(idim0) '))'');']);
+ adata.dimunits = {tunits};
+ case 2
+ if strcmp(upper(diagname),'IDA') && ~usemdsplus
+ % rho, time in original dimension, so do not transpose (seems different with mdsplus... to check)
+ idim_x = 0;
+ idim_t = 1;
+ else
+ adata.data = adata.data';
+ did_transpose = 1;
+ idim_x = 1;
+ idim_t = 0;
+ end
+ % transposed because of C relation and backward compatibility with sf2sig part
+ eval(['x=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(idim_x) ')'');']);
+ if prod(size(x))==length(x); x = reshape(x,1,length(x)); end
+ eval(['time=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(idim_t) ')'');']);
+ time = reshape(time,1,length(time));
+ adata.dim = {x, time};
+ eval(['xunits=deblank(mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(idim_x) '))''));']);
+ eval(['tunits=deblank(mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(idim_t) '))''));']);
+ adata.dimunits = {xunits, tunits};
% $$$ case 3
% $$$ eval(['x=mdsvalue(''dim_of(_rdaeff' user diagname ',0)'');']);
@@ -307,20 +307,20 @@ if usemdsplus
% $$$ hsigunits = adata.dimunits{ihsig};
% $$$ adata.dimunits = {xunits, tunits, hsigunits};
- otherwise
- itime = 1; % default
- for i=1:nbofdim
- eval(['dimarray=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(i-1) ')'');']);
- if prod(size(dimarray)) == length(dimarray)
- eval(['adata.dim{' num2str(i) '}=reshape(dimarray,1,length(dimarray));']);
- else
+ otherwise
+ itime = 1; % default
+ for i=1:nbofdim
+ eval(['dimarray=mdsvalue(''dim_of(_rdaeff' user diagname ',' num2str(i-1) ')'');']);
+ if prod(size(dimarray)) == length(dimarray)
+ eval(['adata.dim{' num2str(i) '}=reshape(dimarray,1,length(dimarray));']);
+ else
eval(['adata.dim{' num2str(i) '} = dimarray;']);
+ end
+ eval(['adata.dimunits{' num2str(i) '}=deblank(mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(i-1) '))''));']);
+ if strcmp(adata.dimunits{i},'s'); itime = i; end
end
- eval(['adata.dimunits{' num2str(i) '}=deblank(mdsvalue(''units_of(dim_of(_rdaeff' user diagname ',' num2str(i-1) '))''));']);
- if strcmp(adata.dimunits{i},'s'); itime = i; end
- end
- x = adata.dim{min(setdiff([1:2],itime))};
- time = adata.dim{itime};
+ x = adata.dim{min(setdiff([1:2],itime))};
+ time = adata.dim{itime};
end
adata.value = adata.data; % for backward compatibility might need to keep .value, to be checked later, .data for sure
@@ -346,7 +346,7 @@ else
else
[adata,adata_time, adata_area]=sf2sig(diagname,shot,sigtype,'-exp',shotfile_exp);
end
- adata.data = adata.value; % at this stage keep both but try to work only on .data
+ adata.data = adata.value; % at this stage keep both but try to work only on .data
catch ME
throw(ME)
end
@@ -358,7 +358,7 @@ else
else
[adata,adata_time, adata_area]=sf2sig(diagname,shot,sigtype,[time_int(1);time_int(end)],'-exp',shotfile_exp);
end
- adata.data = adata.value; % at this stage keep both but try to work only on .data (for adata which can be from sf2.. or mds)
+ adata.data = adata.value; % at this stage keep both but try to work only on .data (for adata which can be from sf2.. or mds)
catch ME
throw(ME)
end
@@ -444,13 +444,13 @@ else
end
end
adata.units = adata.unit;
-elseif isempty(param_set_name) && ~area_base && ~time_base
+ elseif isempty(param_set_name) && ~area_base && ~time_base
% use sf2par
try
if ~isempty(extra_arg_sf2sig) && ~strcmp(extra_arg_sf2sig,'[]')
- eval(['[adata]=sf2par(diagname,shot,param_name,sigtype,''-exp'',shotfile_exp,' extra_arg_sf2sig ');']);
+ eval(['[adata]=sf2par(diagname,shot,param_name,sigtype,''-exp'',shotfile_exp,' extra_arg_sf2sig ');']);
else
- eval(['[adata]=sf2par(diagname,shot,param_name,sigtype,''-exp'',shotfile_exp);']);
+ eval(['[adata]=sf2par(diagname,shot,param_name,sigtype,''-exp'',shotfile_exp);']);
end
adata.data = adata.value;
catch ME
@@ -460,9 +460,9 @@ elseif isempty(param_set_name) && ~area_base && ~time_base
% use sf2ps
try
if ~isempty(extra_arg_sf2sig) && ~strcmp(extra_arg_sf2sig,'[]')
- eval(['[adata]=sf2ps(diagname,shot,param_set_name,sigtype,''-exp'',shotfile_exp,' extra_arg_sf2sig ');']);
+ eval(['[adata]=sf2ps(diagname,shot,param_set_name,sigtype,''-exp'',shotfile_exp,' extra_arg_sf2sig ');']);
else
- eval(['[adata]=sf2ps(diagname,shot,param_set_name,sigtype,''-exp'',shotfile_exp);']);
+ eval(['[adata]=sf2ps(diagname,shot,param_set_name,sigtype,''-exp'',shotfile_exp);']);
end
adata.data = adata.value;
catch ME
diff --git a/matlab/AUG/run_torbeam_fullshot.m b/matlab/AUG/run_torbeam_fullshot.m
index cc84f4ac30cd26b25ead58fae36929d6358740d3..6b1c1fdb05de0fcdf5276fecadbf178b6877d84d 100644
--- a/matlab/AUG/run_torbeam_fullshot.m
+++ b/matlab/AUG/run_torbeam_fullshot.m
@@ -4,7 +4,7 @@ function [torbeam_out_struct, file_out_prefix]=run_torbeam_fullshot(shot,varargi
%
% Run tbdemo, using line command execution of TORBEAM, to run torbeam acroos full shot on reduced time axis
%
-% shot: shot number for which to run Torbeam.
+% shot: shot number for which to run Torbeam.
% If empty or not given, ask for it
% if negative, assume output file exists, do not re-run TORBEAM and just reads data into structure torbeam_out_struct
%
@@ -32,13 +32,13 @@ if nargin>=3 && mod(length(varargin),2)==0
for i=1:2:length(varargin)-1
if ~isempty(varargin{i}) && ~isempty(varargin{i+1})
switch lower(varargin{i})
- case {'time'}
- time_array = varargin{i+1};
- case {'file_prefix'}
- file_out_prefix = varargin{i+1};
- otherwise
- disp(['case ' lower(varargin{i}) ' not yet implemented, ask Olivier.Sauter@epfl.ch'])
- return
+ case {'time'}
+ time_array = varargin{i+1};
+ case {'file_prefix'}
+ file_out_prefix = varargin{i+1};
+ otherwise
+ disp(['case ' lower(varargin{i}) ' not yet implemented, ask Olivier.Sauter@epfl.ch'])
+ return
end
end
end
@@ -74,7 +74,7 @@ if shot>0
else
disp('do not use IDA since shotfile does not seem to exist')
end
-
+
for igyro=1:8
filename=[file_out_prefix num2str(igyro) '.dat'];
unix(['rm ' filename ' >& /dev/null']); % since cannot write over an existing file by default
@@ -84,14 +84,14 @@ if shot>0
if ~isempty(itt)
itt_tok=find(time_array>=pgyro.t(itt(1)) & time_array<=pgyro.t(itt(end)));
if ~isempty(itt_tok)
- pgyro_tok=interp1(pgyro.data(itt,igyro),time_array(itt_tok));
- disp(['running system ' num2str(igyro) '...']);
- for j=1:length(itt_tok)
- if pgyro_tok(j)>1e5
- [a,b]=unix(['~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -ntm ' dousedcr ' ' dousebetapol ' -eqdiag EQI -usemirror -cdrive 1 >> ' ['.' filename]]); % -exp AUGE
- end
- end
- [a,b]=unix(['egrep -e ''^Shot''' ' .' filename ' > ' filename]);
+ pgyro_tok=interp1(pgyro.data(itt,igyro),time_array(itt_tok));
+ disp(['running system ' num2str(igyro) '...']);
+ for j=1:length(itt_tok)
+ if pgyro_tok(j)>1e5
+ [a,b]=unix(['~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -ntm ' dousedcr ' ' dousebetapol ' -eqdiag EQI -usemirror -cdrive 1 >> ' ['.' filename]]); % -exp AUGE
+ end
+ end
+ [a,b]=unix(['egrep -e ''^Shot''' ' .' filename ' > ' filename]);
end
end
end
@@ -100,16 +100,16 @@ end
for igyro=1:8
try
eval(['[shot_tbnam,tbout{igyro}.shot,time_tbnam,tbout{igyro}.time,gyro_tbnam,tbout{igyro}.gyro,pol_tbnam,tbout{igyro}.pol,tor_tbnam,tbout{igyro}.tor,' ...
- 'pow_tbnam,tbout{igyro}.pow,r_tbnam,tbout{igyro}.r,z_tbnam,tbout{igyro}.z,rho_tbnam,tbout{igyro}.rhopol_dep,pwr_dep_tbnam,tbout{igyro}.rhopol_pwr_dep,rhopol_cd_dep_tbnam,tbout{igyro}.rhopol_cd_dep,pdens_peak_tbnam,' ...
- 'tbout{igyro}.pdens_peak,rhopol_pdens_wid_tbnam,tbout{igyro}.rhopol_pdens_width,jcd_peak_tbnam,tbout{igyro}.jcd_peak,rhopol_c_wid_tbnam,tbout{igyro}.rhopol_jcd_width,pni_tbnam,tbout{igyro}.pni,picr_tbnam,tbout{igyro}.picr,prad_tbnam,tbout{igyro}.prad,' ...
- 'betan_tbnam,tbout{igyro}.betan,ipl_tbnam,tbout{igyro}.ipl,bt_tbnam,tbout{igyro}.bt,a1_tbnam,tbout{igyro}.ampN1,a2_tbnam,tbout{igyro}.ampN2,rhopolntm_tbnam,tbout{igyro}.rhopolntm]=' ...
- 'textread(''' file_out_prefix num2str(igyro) '.dat'',''%s%d%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f'');']);
+ 'pow_tbnam,tbout{igyro}.pow,r_tbnam,tbout{igyro}.r,z_tbnam,tbout{igyro}.z,rho_tbnam,tbout{igyro}.rhopol_dep,pwr_dep_tbnam,tbout{igyro}.rhopol_pwr_dep,rhopol_cd_dep_tbnam,tbout{igyro}.rhopol_cd_dep,pdens_peak_tbnam,' ...
+ 'tbout{igyro}.pdens_peak,rhopol_pdens_wid_tbnam,tbout{igyro}.rhopol_pdens_width,jcd_peak_tbnam,tbout{igyro}.jcd_peak,rhopol_c_wid_tbnam,tbout{igyro}.rhopol_jcd_width,pni_tbnam,tbout{igyro}.pni,picr_tbnam,tbout{igyro}.picr,prad_tbnam,tbout{igyro}.prad,' ...
+ 'betan_tbnam,tbout{igyro}.betan,ipl_tbnam,tbout{igyro}.ipl,bt_tbnam,tbout{igyro}.bt,a1_tbnam,tbout{igyro}.ampN1,a2_tbnam,tbout{igyro}.ampN2,rhopolntm_tbnam,tbout{igyro}.rhopolntm]=' ...
+ 'textread(''' file_out_prefix num2str(igyro) '.dat'',''%s%d%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f'');']);
% eval(['[gyro_tbnam,tbout{igyro}.gyro,shot_tbnam,tbout{igyro}.shot,time_tbnam,tbout{igyro}.time,pol_tbnam,tbout{igyro}.pol,tor_tbnam,tbout{igyro}.tor,' ...
% 'pow_tbnam,tbout{igyro}.pow,r_tbnam,tbout{igyro}.r,z_tbnam,tbout{igyro}.z,pwr_dep_tbnam,tbout{igyro}.rhopol_pwr_dep,rhopol_cd_dep_tbnam,tbout{igyro}.rhopol_cd_dep,jcd_peak_tbnam,' ...
% 'tbout{igyro}.jcd_peak,rhopol_c_wid_tbnam,tbout{igyro}.rhopol_c_wid,pni_tbnam,tbout{igyro}.pni,picr_tbnam,tbout{igyro}.picr,prad_tbnam,tbout{igyro}.prad,' ...
- % 'betan_tbnam,tbout{igyro}.betan,ipl_tbnam,tbout{igyro}.ipl,bt_tbnam,tbout{igyro}.bt,a1_tbnam,tbout{igyro}.a1,a2_tbnam,tbout{igyro}.a2,rhopolntm_tbnam,tbout{igyro}.rhopolntm]=' ...
- % 'textread(''' file_out_prefix num2str(igyro) '.dat'',''%s%d%s%d%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f'');']);
+ % 'betan_tbnam,tbout{igyro}.betan,ipl_tbnam,tbout{igyro}.ipl,bt_tbnam,tbout{igyro}.bt,a1_tbnam,tbout{igyro}.a1,a2_tbnam,tbout{igyro}.a2,rhopolntm_tbnam,tbout{igyro}.rhopolntm]=' ...
+ % 'textread(''' file_out_prefix num2str(igyro) '.dat'',''%s%d%s%d%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f%s%f'');']);
catch
disp(['problems reading file ' file_out_prefix num2str(igyro) '.dat: may be some errors with tbdemo, check file, skipped'])
@@ -127,11 +127,11 @@ end
% comments for hiytory backup:
-% [a,b]=unix(['ssh sxaug21.aug.ipp.mpg.de ~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -usedcr -eqdiag EQI -betapol -usemirror -cdrive 1 >> ' ['.' filename]]);
+% [a,b]=unix(['ssh sxaug21.aug.ipp.mpg.de ~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -usedcr -eqdiag EQI -betapol -usemirror -cdrive 1 >> ' ['.' filename]]);
-% [a,b]=unix(['ssh sxaug21.aug.ipp.mpg.de ~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -ntm -usedcr -eqdiag EQI -betapol -usemirror -cdrive 1 >> ' ['.' filename]]);
+% [a,b]=unix(['ssh sxaug21.aug.ipp.mpg.de ~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -ntm -usedcr -eqdiag EQI -betapol -usemirror -cdrive 1 >> ' ['.' filename]]);
% -shot 29672 -time 3.0 -system 5 -batch -ntm -silent -usemirror -cdrive 1
-% [a,b]=unix(['ssh sxaug21.aug.ipp.mpg.de ~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -ntm -usemirror -cdrive 1 >> ' ['.' filename]]);
+% [a,b]=unix(['ssh sxaug21.aug.ipp.mpg.de ~rem/public/tbm_demo/tbmdemo -batch -silent -shot ' num2str(shot) ' -time ' num2str(time_array(itt_tok(j))) ' -system ' num2str(igyro) ' -ntm -usemirror -cdrive 1 >> ' ['.' filename]]);
% [a,b]=unix(['grep -v ''could not''' ' .' filename '| grep -v ''invalid'' | grep -v ''Error'' | egrep -e ''^$'' -v > ' filename]);
diff --git a/matlab/AUG/torbeam_prepare_inputs_and_run.m b/matlab/AUG/torbeam_prepare_inputs_and_run.m
index efc7d853c74f58ced7e48ed255a9e4f3e0695112..295ad894da2cfdf10b7ed3e3781c289144a9f6e3 100644
--- a/matlab/AUG/torbeam_prepare_inputs_and_run.m
+++ b/matlab/AUG/torbeam_prepare_inputs_and_run.m
@@ -1,7 +1,7 @@
function [torbeam_out,torbeam_in,varargout] = torbeam_prepare_inputs_and_run(shot,times_in,varargin);
%
% [torbeam_out,torbeam_in,varargout] = torbeam_prepare_inputs_and_run(shot,times_in,varargin);
-%
+%
% varargin{1}: torbeam_in (from a previous run, so avoids to reload all the data)
% leave then times_in empty to rerun at all times in torbeam_in.inbeam.t_some_beam_on or select times points from that array
% varargin{2}: source for gdat profiles/equilibrium related: [] (default sources), 'IDA' (IDA/IDE sources), {'TRA','expname'} for TRANSP
@@ -93,7 +93,7 @@ if doload && (~exist('times_for_torbeam_eff') || isempty(times_for_torbeam_eff))
times_for_torbeam_eff = torbeam_in.nete.fit.t(torbeam_in.nete.fit.t>0);
end
% load beam releated data including theta,phi in torbeam reference
-if doload,
+if doload,
[torbeam_in.inbeam] = read_ech_py(shot,times_for_torbeam_eff,[],tbangles_source);
times_for_torbeam_eff = torbeam_in.inbeam.t_some_beam_on;
else
@@ -134,7 +134,7 @@ if doload; disp(['time for reading data: ' num2str(toc)]); end
if doload,
nb_points_prof = 46;
rhofit = linspace(0,1,nb_points_prof)';
-
+
tb_par_fields=fieldnames(torbeam_in.inbeam.tb_par);
itime_te = iround_os(torbeam_in.nete.fit.t,times_for_torbeam_eff);
@@ -202,7 +202,7 @@ if doload,
fprintf(fid,'%14.6f %14.6f %14.6f %14.6f %14.6f %14.6f %14.6f %14.6f\n',eqd_with_b.psi(1:nb_rmesh,1:nb_zmesh));
if mod(nb_rmesh*nb_zmesh,8) ~= 0; fprintf(fid,'\n'); end
fclose(fid);
-
+
if isempty(torbeam_in.zeff.data) || torbeam_in.prepare_run_options.zeff_default < 0.
zeff_eff = abs(torbeam_in.prepare_run_options.zeff_default);
else
@@ -214,10 +214,10 @@ if doload,
torbeam_in.fname{it}.inbeam{ibeam} = fullfile(torbeam_in.dir_torbeam,['inbeam' '_t' num2str(torbeam_in.inbeam.t_some_beam_on(it)) 'g' num2str(ibeam) '.dat']);
[aa,bb]=unix(['cp /afs/ipp-garching.mpg.de/home/o/osauter/TORBEAM/inbeam_default.dat ' torbeam_in.fname{it}.inbeam{ibeam}]);
fid=fopen(torbeam_in.fname{it}.inbeam{ibeam},'a');
- fprintf(fid,' xf = %f, ! wave frequency om=2*pi*xf\n',torbeam_in.inbeam.freq(ibeam));
- fprintf(fid,' nmod = %d, ! mode selection: O-mode (1), X-mode (-1)\n',torbeam_in.inbeam.rfmod(ibeam));
- fprintf(fid,' xtordeg = %f, ! geom. optics injection angle\n',torbeam_in.inbeam.phi_t(ibeam,it_inb(it)));
- fprintf(fid,' xpoldeg = %f, ! geom. optics injection angle\n',torbeam_in.inbeam.theta_t(ibeam,it_inb(it)));
+ fprintf(fid,' xf = %f, ! wave frequency om=2*pi*xf\n',torbeam_in.inbeam.freq(ibeam));
+ fprintf(fid,' nmod = %d, ! mode selection: O-mode (1), X-mode (-1)\n',torbeam_in.inbeam.rfmod(ibeam));
+ fprintf(fid,' xtordeg = %f, ! geom. optics injection angle\n',torbeam_in.inbeam.phi_t(ibeam,it_inb(it)));
+ fprintf(fid,' xpoldeg = %f, ! geom. optics injection angle\n',torbeam_in.inbeam.theta_t(ibeam,it_inb(it)));
% may be position and curvature, but get defaults from tb_gui. Check with tb_gui how several launchers are given
for i=1:length(tb_par_fields)
fprintf(fid,[' ' tb_par_fields{i} ' = %f,\n'],torbeam_in.inbeam.tb_par.(tb_par_fields{i})(ibeam));
@@ -230,7 +230,7 @@ if doload,
end
disp(['time for creating all input files: ' num2str(toc)])
end
-
+
% run TORBEAM
current_dir = pwd;
eval(['cd ' torbeam_in.dir_torbeam])
diff --git a/matlab/D3D/d3d_help_parameters.m b/matlab/D3D/d3d_help_parameters.m
index ec8d86a7d139db3a5d5a77e3ef1e8252b8066558..e88c176dd9ddaa9734574f5dfd6645972010821a 100644
--- a/matlab/D3D/d3d_help_parameters.m
+++ b/matlab/D3D/d3d_help_parameters.m
@@ -5,9 +5,9 @@ function help_struct = d3d_help_parameters(parameter_list)
%
% return the whole help structure if parameter_list empty or not provided
%
-% do:
+% do:
% help_struct = d3d_help_parameters(fieldnames(gdat_data.gdat_params));
-%
+%
% to get relevant help description
%
@@ -29,7 +29,7 @@ help_struct_all = struct(...
% $$$ ' as well'];
help_struct_all.fit_tension = ['smoothing value used in interpos fitting routine, -30 means ''30 times default value'', thus -1 often a' ...
' good value' char(10) ...
- 'cxrs, nete: if numeric, default for all cases, if structure, default for non given fields'];
+ 'cxrs, nete: if numeric, default for all cases, if structure, default for non given fields'];
help_struct_all.time = 'time(s) value(s) if relevant, for example eqdsk is provided by default only for time=1.0s';
% $$$ help_struct_all.zshift = 'vertical shift of equilibrium, either for eqdsk (1 to shift to zaxis=0) or for mapping measurements on to rho surfaces [m]';
help_struct_all.cocos = ['cocos value desired in output, uses eqdsk_cocos_transform. Note should use latter if a specific Ip and/or B0 sign' ...
diff --git a/matlab/D3D/d3d_requests_mapping.m b/matlab/D3D/d3d_requests_mapping.m
index 8eb80c6cbd70ab8405269fff92b77b90d362c98d..f3789d1c9ea3c580ad858d56dfa15119a416dda2 100644
--- a/matlab/D3D/d3d_requests_mapping.m
+++ b/matlab/D3D/d3d_requests_mapping.m
@@ -4,13 +4,13 @@ function mapping = d3d_requests_mapping(data_request)
%
% Defaults
mapping = struct(...
- 'label', '', ...
- 'method', '', ...
- 'expression','', ...
- 'timedim', -1, ... % dim which is the time is the database, to copy in .t, the other dims are in .x (-1 means last dimension)
- 'gdat_timedim',[], ... % if need to reshape data and dim orders to have timedim as gdat_timedim (shifting time to gdat_timedim)
- 'min', -inf, ...
- 'max', inf);
+ 'label', '', ...
+ 'method', '', ...
+ 'expression','', ...
+ 'timedim', -1, ... % dim which is the time is the database, to copy in .t, the other dims are in .x (-1 means last dimension)
+ 'gdat_timedim',[], ... % if need to reshape data and dim orders to have timedim as gdat_timedim (shifting time to gdat_timedim)
+ 'min', -inf, ...
+ 'max', inf);
% Note that gdat_timedim is set to timedim at end of this function if empty
% gdat_timedim should have effective index of the time dimension in gdat
@@ -41,100 +41,100 @@ if iscell(data_request) % || (~ischar(data_request) && length(data_request)>1)
end
switch lower(data_request)
- case 'a_minor'
- mapping.timedim = 1;
- mapping.label = 'a\_minor';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\aminor'}];
- case 'b0'
- mapping.timedim = 1;
- mapping.label = 'B_0';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\bcentr'}];
- case 'beta'
- mapping.timedim = 1;
- mapping.label = '\beta';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\betat'}];
- case 'betan'
- mapping.timedim = 1;
- mapping.label = '\beta_N';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\betan'}];
- case 'betap'
- mapping.timedim = 1;
- mapping.label = '\beta_p';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\betap'}];
- case {'bolo', 'bolom'}
- mapping.timedim = 1;
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase';
- case 'delta'
- mapping.timedim = 1;
- mapping.label = 'delta';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''delta_bottom''; ' ...
+ case 'a_minor'
+ mapping.timedim = 1;
+ mapping.label = 'a\_minor';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\aminor'}];
+ case 'b0'
+ mapping.timedim = 1;
+ mapping.label = 'B_0';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\bcentr'}];
+ case 'beta'
+ mapping.timedim = 1;
+ mapping.label = '\beta';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\betat'}];
+ case 'betan'
+ mapping.timedim = 1;
+ mapping.label = '\beta_N';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\betan'}];
+ case 'betap'
+ mapping.timedim = 1;
+ mapping.label = '\beta_p';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\betap'}];
+ case {'bolo', 'bolom'}
+ mapping.timedim = 1;
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase';
+ case 'delta'
+ mapping.timedim = 1;
+ mapping.label = 'delta';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''delta_bottom''; ' ...
'gdat_tmp=gdat_d3d(shot,params_eff);params_eff.data_request=''delta_top'';' ...
- 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.data = 0.5.*(gdat_tmp.data+gdat_tmp2.data);'];
- case 'delta_top'
- mapping.label = 'delta\_top';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\tritop'}];
- case 'delta_bottom'
- mapping.label = 'delta\_bottom';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\tribot'}];
- case 'den_target'
- mapping.timedim = 1;
- mapping.label = {'density_ref','density'};
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''\dstdenp'';' ...
+ 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.data = 0.5.*(gdat_tmp.data+gdat_tmp2.data);'];
+ case 'delta_top'
+ mapping.label = 'delta\_top';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\tritop'}];
+ case 'delta_bottom'
+ mapping.label = 'delta\_bottom';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\tribot'}];
+ case 'den_target'
+ mapping.timedim = 1;
+ mapping.label = {'density_ref','density'};
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''\dstdenp'';' ...
'gdat_tmp=gdat_d3d(shot,params_eff);params_eff.data_request=''\dssdenest'';' ...
'gdat_tmp2=gdat_d3d(shot,params_eff);' ...
- 'gdat_tmp.data(:,2) = gdat_tmp2.data;' ...
+ 'gdat_tmp.data(:,2) = gdat_tmp2.data;' ...
'gdat_tmp.dim{2}=[1 2];gdat_tmp.dimunits{1}=''s'';gdat_tmp.dimunits{2}={''dstdenp'',''dssdenest''};' ...
'gdat_tmp.gdat_request=''' data_request ''';'];
- case {'ece', 'ece_rho'}
- mapping.timedim = 1;
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'eqdsk'
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'equil'
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'halpha'
- mapping.timedim = 1;
- mapping.label = 'Halpha';
- mapping.method = 'signal';
- mapping.expression = [{'SPECTROSCOPY'},{'\fs04'}];
- case {'h_scalings', 'h98y2'}
- mapping.label = 'H_{98y2}';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'results.confinement.times.scalings:h_thh98y2'}];
- mapping.expression = [{'D3D'},{'\h_thh98y2'}];
- case 'ioh'
- mapping.timedim = 1;
- mapping.label = 'I ohmic transformer';
- mapping.method = 'signal';
- mapping.expression = [{'MBI'},{'IOH'}];
- case 'ip'
- mapping.timedim = 1;
- mapping.label = 'Plasma current';
- mapping.method = 'signal';
- mapping.expression = [{'efit01'},{'\cpasma'}];
- case 'kappa'
- mapping.timedim = 1;
- mapping.label = '\kappa';
- mapping.method = 'signal';
- mapping.expression = [{'efit01'},{'\kappa'}];
+ case {'ece', 'ece_rho'}
+ mapping.timedim = 1;
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'eqdsk'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'equil'
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'halpha'
+ mapping.timedim = 1;
+ mapping.label = 'Halpha';
+ mapping.method = 'signal';
+ mapping.expression = [{'SPECTROSCOPY'},{'\fs04'}];
+ case {'h_scalings', 'h98y2'}
+ mapping.label = 'H_{98y2}';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'results.confinement.times.scalings:h_thh98y2'}];
+ mapping.expression = [{'D3D'},{'\h_thh98y2'}];
+ case 'ioh'
+ mapping.timedim = 1;
+ mapping.label = 'I ohmic transformer';
+ mapping.method = 'signal';
+ mapping.expression = [{'MBI'},{'IOH'}];
+ case 'ip'
+ mapping.timedim = 1;
+ mapping.label = 'Plasma current';
+ mapping.method = 'signal';
+ mapping.expression = [{'efit01'},{'\cpasma'}];
+ case 'kappa'
+ mapping.timedim = 1;
+ mapping.label = '\kappa';
+ mapping.method = 'signal';
+ mapping.expression = [{'efit01'},{'\kappa'}];
% $$$ case 'kappa_top'
% $$$ mapping.timedim = 1;
% $$$ mapping.label = '\kappa^{top}';
@@ -145,16 +145,16 @@ switch lower(data_request)
% $$$ mapping.label = '\kappa_{bottom}';
% $$$ mapping.method = 'signal';
% $$$ mapping.expression = [{'FPG'},{'kuntn'}];
- case 'li'
- mapping.timedim = 1;
- mapping.label = 'l_i';
- mapping.method = 'signal';
- mapping.expression = [{'efit01'},{'\li3'}];
- case 'mhd'
- mapping.timedim = 1;
- mapping.label = 'Odd and Even n';
- mapping.method = 'expression';
- table_mhd_from_Strait = { ...
+ case 'li'
+ mapping.timedim = 1;
+ mapping.label = 'l_i';
+ mapping.method = 'signal';
+ mapping.expression = [{'efit01'},{'\li3'}];
+ case 'mhd'
+ mapping.timedim = 1;
+ mapping.label = 'Odd and Even n';
+ mapping.method = 'expression';
+ table_mhd_from_Strait = { ...
'MPI66M020D', 19.5 , 'MPI66M200D' , 199.7, 180.2; ...
'MPI66M067D', 67.5 , 'MPI66M247D' , 246.4, 178.9; ...
'MPI66M097D', 97.4, 'MPI66M277D', 277.5, 180.1; ...
@@ -163,43 +163,43 @@ switch lower(data_request)
'MPI66M137D', 137.4, 'MPI66M322D', 317.4, 180.0; ...
'MPI66M157D', 157.6, 'MPI66M340D', 339.7, 182.2};
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''MOD'',''OddN''}; ' ...
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''MOD'',''OddN''}; ' ...
'gdat_tmp=gdat_d3d(shot,params_eff);gdat_tmp.data=reshape(gdat_tmp.data,length(gdat_tmp.data),1 );' ...
- 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
- 'gdat_tmp.n_odd.data = gdat_tmp.data;gdat_tmp.n_odd.data_request=params_eff.data_request;' ...
- 'params_eff.data_request={''MOD'',''EvenN''};' ...
- 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
- 'gdat_tmp.n_even.data = gdat_tmp2.data;gdat_tmp.n_even.data_request=params_eff.data_request;gdat_tmp.label={''n\_odd'',''n\_even''};' ...
- 'params_eff.data_request={''MOD'',''OddNAmp''};' ...
- 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.n_odd.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
- 'gdat_tmp.n_odd.amp_t=gdat_tmp2.t;' ...
- 'params_eff.data_request={''MOD'',''EvenNAmp''};' ...
- 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.n_even.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
- 'gdat_tmp.n_even.amp_t=gdat_tmp2.t;' ...
- 'gdat_tmp.full_path=''MOD/Odd in data and .n_odd; .n_even'';' ...
- 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
- case 'nbi'
- mapping.timedim = 1;
- mapping.label = 'Pnbi [W]';
+ 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
+ 'gdat_tmp.n_odd.data = gdat_tmp.data;gdat_tmp.n_odd.data_request=params_eff.data_request;' ...
+ 'params_eff.data_request={''MOD'',''EvenN''};' ...
+ 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+ 'gdat_tmp.n_even.data = gdat_tmp2.data;gdat_tmp.n_even.data_request=params_eff.data_request;gdat_tmp.label={''n\_odd'',''n\_even''};' ...
+ 'params_eff.data_request={''MOD'',''OddNAmp''};' ...
+ 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.n_odd.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+ 'gdat_tmp.n_odd.amp_t=gdat_tmp2.t;' ...
+ 'params_eff.data_request={''MOD'',''EvenNAmp''};' ...
+ 'gdat_tmp2=gdat_d3d(shot,params_eff);gdat_tmp.n_even.amp=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+ 'gdat_tmp.n_even.amp_t=gdat_tmp2.t;' ...
+ 'gdat_tmp.full_path=''MOD/Odd in data and .n_odd; .n_even'';' ...
+ 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
+ case 'nbi'
+ mapping.timedim = 1;
+ mapping.label = 'Pnbi [W]';
% $$$ mapping.method = 'signal';
% $$$ mapping.expression = [{'nb'},{'pinj'}]; % in kW, use expression to have it in W
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''nb''},{''pinj''}];' ...
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''nb''},{''pinj''}];' ...
'gdat_tmp=gdat_d3d(shot,params_eff);gdat_tmp.units=''W'';' ...
- 'gdat_tmp.data = 1e3.*gdat_tmp.data;gdat_tmp.label=''' mapping.label ''';' ...
+ 'gdat_tmp.data = 1e3.*gdat_tmp.data;gdat_tmp.label=''' mapping.label ''';' ...
'gdat_tmp.gdat_request=''' data_request ''';' ...
'gdat_tmp.data_smooth=interpos(gdat_tmp.t,gdat_tmp.data,-3e7);' ...
'gdat_tmp.data_smooth=max(0.,gdat_tmp.data_smooth);'];
- case {'neint'}
- mapping.timedim = 1;
- mapping.label = 'line integrated el. density';
- mapping.method = 'signal';
- mapping.expression = {'d3d','\d3d::top.electrons.bci:denv1'};
- case {'neints'}
- mapping.timedim = 1;
- mapping.label = {'denv1','denv2','denv3'};
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''\d3d::top.electrons.bci:denv1'';' ...
+ case {'neint'}
+ mapping.timedim = 1;
+ mapping.label = 'line integrated el. density';
+ mapping.method = 'signal';
+ mapping.expression = {'d3d','\d3d::top.electrons.bci:denv1'};
+ case {'neints'}
+ mapping.timedim = 1;
+ mapping.label = {'denv1','denv2','denv3'};
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''\d3d::top.electrons.bci:denv1'';' ...
'gdat_tmp=gdat_d3d(shot,params_eff);gdat_tmp.denv1=gdat_tmp;' ...
'params_eff.data_request=''\d3d::top.electrons.bci:denv2'';gdat_denv2=gdat_d3d(shot,params_eff);' ...
'gdat_tmp.denv2=gdat_denv2;gdat_tmp.data(:,2)=gdat_denv2.data;' ...
@@ -207,26 +207,26 @@ switch lower(data_request)
'gdat_tmp.denv3=gdat_denv3;gdat_tmp.data(:,3)=gdat_denv3.data;' ...
'gdat_tmp.dim{2} = [1:3];gdat_tmp.dimunits{2} = {''denv1'',''denv2'',''denv3''};' ...
';gdat_tmp.dimunits{1}=''s'';'];
- case 'nel'
- mapping.timedim = 1;
- mapping.label = 'NEBAR\_R0';
- mapping.method = 'signal';
- mapping.expression = [{'efit01'},{'\NEBAR_R0'}];
- case {'ne', 'ne_rho'}
- mapping.timedim = 2;
- mapping.label = 'ne';
- mapping.method = 'switchcase';
- case 'nete_rho'
- mapping.timedim = 2;
- mapping.label = 'ne and Te';
- mapping.method = 'switchcase';
- case 'ni'
- mapping.method = 'switchcase'; % especially since might have option fit, etc
- case {'ng','ngreenwald','n_greenwald'}
- mapping.timedim = 1;
- mapping.label = 'nG=Ip[MA]/(\pi a^2)*1e20 on nel times';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ case 'nel'
+ mapping.timedim = 1;
+ mapping.label = 'NEBAR\_R0';
+ mapping.method = 'signal';
+ mapping.expression = [{'efit01'},{'\NEBAR_R0'}];
+ case {'ne', 'ne_rho'}
+ mapping.timedim = 2;
+ mapping.label = 'ne';
+ mapping.method = 'switchcase';
+ case 'nete_rho'
+ mapping.timedim = 2;
+ mapping.label = 'ne and Te';
+ mapping.method = 'switchcase';
+ case 'ni'
+ mapping.method = 'switchcase'; % especially since might have option fit, etc
+ case {'ng','ngreenwald','n_greenwald'}
+ mapping.timedim = 1;
+ mapping.label = 'nG=Ip[MA]/(\pi a^2)*1e20 on nel times';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_d3d(shot,params_eff);params_eff.data_request=''ip'';' ...
'gdat_tmp2=gdat_d3d(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
@@ -235,39 +235,39 @@ switch lower(data_request)
'tmp_data3=interp1(gdat_tmp3.t,gdat_tmp3.data,gdat_tmp.t,[],NaN);' ...
'gdat_tmp.data = abs(tmp_data2*1e-6./pi./(tmp_data3.^2+1e-5));' ...
'ij=find(gdat_tmp.data<0 | gdat_tmp.data>4);gdat_tmp.data(ij)=NaN;gdat_tmp.data = gdat_tmp.data * 1e20;'];
- case {'ngf','greenwald_fraction','f_greenwald','ng_fraction'}
- mapping.timedim = 1;
- mapping.label = 'Greenwald\_fraction=n\_el/n\_G';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ case {'ngf','greenwald_fraction','f_greenwald','ng_fraction'}
+ mapping.timedim = 1;
+ mapping.label = 'Greenwald\_fraction=n\_el/n\_G';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_d3d(shot,params_eff);params_eff.data_request=''n_greenwald'';' ...
'gdat_tmp2=gdat_d3d(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
'gdat_tmp.data = gdat_tmp.data*1e6./(tmp_data2+1e-5);' ...
'gdat_tmp.units='''';gdat_tmp.dimunits{1}=''s'';'];
- case {'f2b', 'pcf2b'}
- mapping.label = {'pcf2b','f2b'}';
- mapping.timedim = 1;
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''d3d''},{''ptdata("pcf2b")''}];' ...
+ case {'f2b', 'pcf2b'}
+ mapping.label = {'pcf2b','f2b'}';
+ mapping.timedim = 1;
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''d3d''},{''ptdata("pcf2b")''}];' ...
'gdat_tmp=gdat_d3d(shot,params_eff);params_eff = gdat_data.gdat_params;' ...
'params_eff.data_request=[{''d3d''},{''ptdata("f2b")''}];gdat_tmp2=gdat_d3d(shot,params_eff);' ...
- 'if ~isempty(gdat_tmp2.t); gdat_tmp.data(:,2) = interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t);else;' ...
+ 'if ~isempty(gdat_tmp2.t); gdat_tmp.data(:,2) = interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t);else;' ...
'gdat_tmp.data(:,2) = NaN(size(gdat_tmp.t)); end;' ...
'gdat_tmp.gdat_request=''' data_request ''';'];
- case 'pgyro'
- mapping.timedim = 1;
- mapping.label = 'EC gyros';
- mapping.method = 'switchcase';
- case 'powers'
- mapping.timedim = 1;
- mapping.label = 'various powers';
- mapping.method = 'switchcase';
- case {'prad','prad_tot','rad','rad_tot'}
- mapping.timedim = 1;
- mapping.label = {'PRAD_divl','PRAD_divu','prad_core','tot-divL-divU','PRAD_TOT'};
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''bolom'',''PRAD_01.PRAD:PRAD_divl''};' ...
+ case 'pgyro'
+ mapping.timedim = 1;
+ mapping.label = 'EC gyros';
+ mapping.method = 'switchcase';
+ case 'powers'
+ mapping.timedim = 1;
+ mapping.label = 'various powers';
+ mapping.method = 'switchcase';
+ case {'prad','prad_tot','rad','rad_tot'}
+ mapping.timedim = 1;
+ mapping.label = {'PRAD_divl','PRAD_divu','prad_core','tot-divL-divU','PRAD_TOT'};
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''bolom'',''PRAD_01.PRAD:PRAD_divl''};' ...
'gdat_tmp=gdat_d3d(shot,params_eff);gdat_tmp.divl=gdat_tmp;' ...
'params_eff.data_request{2}=''PRAD_01.PRAD:PRAD_divu'';gdat_tmpU=gdat_d3d(shot,params_eff);' ...
'gdat_tmp.divu=gdat_tmpU;gdat_tmp.data(:,2)=gdat_tmpU.data;' ...
@@ -278,175 +278,175 @@ switch lower(data_request)
'gdat_tmp.data(:,4) = gdat_tmp.data(:,5)-gdat_tmp.data(:,1)-gdat_tmp.data(:,2);' ...
'gdat_tmp.dim{2} = [1:5];gdat_tmp.dimunits{2} = {''divl'',''divu'',''core'',''tot-divl-divu'',''prad_tot''};' ...
'gdat_tmp.units=''W'';gdat_tmp.dimunits{1}=''s'';'];
- case 'psi_axis'
- mapping.timedim = 1;
- mapping.label ='psi_\axis' ;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\ssimag'}];
- case 'psi_edge'
- mapping.timedim = 1;
- mapping.label = 'psi\_edge';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\ssibry'}];
- case 'q0'
- mapping.timedim = 1;
- mapping.label = 'q_0';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\q0'}];
- case 'qmin'
- mapping.timedim = 1;
- mapping.label = 'q_min';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\qmin'}];
- case 'q95'
- mapping.timedim = 1;
- mapping.label = 'q_{95}';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\q95'}];
- case 'q_edge'
- mapping.timedim = 1;
- mapping.label = 'q_{edge}}';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\ql'}];
- case 'q_rho'
- mapping.timedim = 2;
- mapping.gdat_timedim = 2;
- mapping.label = 'q';
- mapping.method = 'switchcase';
- case {'rot', 'cerqrot'}
- mapping.timedim = 2;
- mapping.label = 'cerqrot';
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'r0'
- mapping.timedim = 1;
- mapping.label = 'R_0';
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\rzero'}];
- case 'rgeom'
- mapping.label = 'Rgeom';
- mapping.timedim = 1;
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''EFIT01''},{''results.geqdsk:rbbbs''}];' ...
+ case 'psi_axis'
+ mapping.timedim = 1;
+ mapping.label ='psi_\axis' ;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\ssimag'}];
+ case 'psi_edge'
+ mapping.timedim = 1;
+ mapping.label = 'psi\_edge';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\ssibry'}];
+ case 'q0'
+ mapping.timedim = 1;
+ mapping.label = 'q_0';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\q0'}];
+ case 'qmin'
+ mapping.timedim = 1;
+ mapping.label = 'q_min';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\qmin'}];
+ case 'q95'
+ mapping.timedim = 1;
+ mapping.label = 'q_{95}';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\q95'}];
+ case 'q_edge'
+ mapping.timedim = 1;
+ mapping.label = 'q_{edge}}';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\ql'}];
+ case 'q_rho'
+ mapping.timedim = 2;
+ mapping.gdat_timedim = 2;
+ mapping.label = 'q';
+ mapping.method = 'switchcase';
+ case {'rot', 'cerqrot'}
+ mapping.timedim = 2;
+ mapping.label = 'cerqrot';
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'r0'
+ mapping.timedim = 1;
+ mapping.label = 'R_0';
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\rzero'}];
+ case 'rgeom'
+ mapping.label = 'Rgeom';
+ mapping.timedim = 1;
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''EFIT01''},{''results.geqdsk:rbbbs''}];' ...
'gdat_tmp2=gdat_d3d(shot,params_eff);params_eff = gdat_data.gdat_params;' ...
'params_eff.data_request=[{''EFIT01''},{''\zmaxis''}];gdat_tmp=gdat_d3d(shot,params_eff);' ...
'ij=find(gdat_tmp2.data==0);if (~isempty(ij));gdat_tmp2.data(ij)=NaN;end;' ...
- 'gdat_tmp.data = 0.5.*(nanmax(gdat_tmp2.data'',[],2)+nanmin(gdat_tmp2.data'',[],2));gdat_tmp.label=''' mapping.label ''';' ...
+ 'gdat_tmp.data = 0.5.*(nanmax(gdat_tmp2.data'',[],2)+nanmin(gdat_tmp2.data'',[],2));gdat_tmp.label=''' mapping.label ''';' ...
'gdat_tmp.gdat_request=''' data_request ''';'];
- case 'r_inboard'
- mapping.label = 'R\_inboard';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Rin'}];
- case 'r_outboard'
- mapping.label = 'R\_outboard';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'FPG'},{'Raus'},{'D3DD'}];
- case 'rhotor'
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor';
- case 'rhotor_edge'
- mapping.timedim = 1;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor\_edge';
- case 'rhotor_norm'
- mapping.timedim = 1;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor\_norm';
- case 'rhovol'
- mapping.timedim = 2;
- mapping.label = 'rhovol\_norm';
- mapping.method = 'switchcase';
- case {'rmag', 'r_mag', 'r_axis'}
- mapping.label = 'R\_magaxis';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\rmaxis'}];
- case 'sxr'
- mapping.timedim = 1;
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase';
- case 'tau_tot'
- mapping.label = '\tau_{tot}';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'TOT'},{'tau_tot'},{'D3DD'}];
- case {'te', 'te_rho'}
- mapping.timedim = 2;
- mapping.label = 'Te';
- mapping.method = 'switchcase';
- case 'ti'
- mapping.label = 'Ti';
- mapping.method = 'switchcase';
- case 'vloop'
- mapping.label = 'Vloop';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\vloopmhd'}];
- case 'volume'
- mapping.label = 'Volume';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\volume'}];
- case 'volume_rho'
- mapping.timedim = 2;
- mapping.label = 'volume\_norm';
- mapping.method = 'switchcase';
- case 'wmhd'
- mapping.label = 'Wmhd';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\Wmhd'}];
- case 'zeff'
- mapping.label = 'zeff from cxrs';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'ZES'},{'Zeff'},{'D3DD'}];
- case 'zeff_cerq'
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- case 'zgeom'
- mapping.label = 'Zgeom';
- mapping.timedim = 1;
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''EFIT01''},{''results.geqdsk:zbbbs''}];' ...
+ case 'r_inboard'
+ mapping.label = 'R\_inboard';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Rin'}];
+ case 'r_outboard'
+ mapping.label = 'R\_outboard';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'FPG'},{'Raus'},{'D3DD'}];
+ case 'rhotor'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor';
+ case 'rhotor_edge'
+ mapping.timedim = 1;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor\_edge';
+ case 'rhotor_norm'
+ mapping.timedim = 1;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor\_norm';
+ case 'rhovol'
+ mapping.timedim = 2;
+ mapping.label = 'rhovol\_norm';
+ mapping.method = 'switchcase';
+ case {'rmag', 'r_mag', 'r_axis'}
+ mapping.label = 'R\_magaxis';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\rmaxis'}];
+ case 'sxr'
+ mapping.timedim = 1;
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase';
+ case 'tau_tot'
+ mapping.label = '\tau_{tot}';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'TOT'},{'tau_tot'},{'D3DD'}];
+ case {'te', 'te_rho'}
+ mapping.timedim = 2;
+ mapping.label = 'Te';
+ mapping.method = 'switchcase';
+ case 'ti'
+ mapping.label = 'Ti';
+ mapping.method = 'switchcase';
+ case 'vloop'
+ mapping.label = 'Vloop';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\vloopmhd'}];
+ case 'volume'
+ mapping.label = 'Volume';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\volume'}];
+ case 'volume_rho'
+ mapping.timedim = 2;
+ mapping.label = 'volume\_norm';
+ mapping.method = 'switchcase';
+ case 'wmhd'
+ mapping.label = 'Wmhd';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\Wmhd'}];
+ case 'zeff'
+ mapping.label = 'zeff from cxrs';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'ZES'},{'Zeff'},{'D3DD'}];
+ case 'zeff_cerq'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ case 'zgeom'
+ mapping.label = 'Zgeom';
+ mapping.timedim = 1;
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''EFIT01''},{''results.geqdsk:zbbbs''}];' ...
'gdat_tmp2=gdat_d3d(shot,params_eff);params_eff = gdat_data.gdat_params;' ...
'params_eff.data_request=[{''EFIT01''},{''\zmaxis''}];gdat_tmp=gdat_d3d(shot,params_eff);' ...
'ij=find(gdat_tmp2.data==0);if (~isempty(ij));gdat_tmp2.data(ij)=NaN;end;' ...
- 'gdat_tmp.data = 0.5.*(nanmax(gdat_tmp2.data'',[],2)+nanmin(gdat_tmp2.data'',[],2));gdat_tmp.label=''' mapping.label ''';' ...
+ 'gdat_tmp.data = 0.5.*(nanmax(gdat_tmp2.data'',[],2)+nanmin(gdat_tmp2.data'',[],2));gdat_tmp.label=''' mapping.label ''';' ...
'gdat_tmp.gdat_request=''' data_request ''';'];
- case 'zmag'
- mapping.label = 'Z\_magaxis';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\zmaxis'}];
- %
- % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- % extra D3D cases (not necessarily in official data_request name list)
- % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- %
- case {'zxpt1', 'xpt'}
- mapping.label = 'zxpt1';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'EFIT01'},{'\zxpt1'}];
- case 'transp'
- mapping.label = 'transp output';
- mapping.method = 'switchcase';
+ case 'zmag'
+ mapping.label = 'Z\_magaxis';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\zmaxis'}];
+ %
+ % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ % extra D3D cases (not necessarily in official data_request name list)
+ % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ %
+ case {'zxpt1', 'xpt'}
+ mapping.label = 'zxpt1';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'EFIT01'},{'\zxpt1'}];
+ case 'transp'
+ mapping.label = 'transp output';
+ mapping.method = 'switchcase';
- otherwise
- mapping.label = data_request;
- mapping.method = 'signal'; % assume a full tracename is given, so just try with tdi (could check there are some ":", etc...)
- % pseudo point name: '\ptdata' given, or {'\ptdata'} add D3D as tree
- if ischar(data_request) && strcmp(data_request(1),'\')
- mapping.expression = {'d3d',data_request};
- else
- mapping.expression = data_request;
- end
-
+ otherwise
+ mapping.label = data_request;
+ mapping.method = 'signal'; % assume a full tracename is given, so just try with tdi (could check there are some ":", etc...)
+ % pseudo point name: '\ptdata' given, or {'\ptdata'} add D3D as tree
+ if ischar(data_request) && strcmp(data_request(1),'\')
+ mapping.expression = {'d3d',data_request};
+ else
+ mapping.expression = data_request;
+ end
+
end
if isempty(mapping.gdat_timedim)
diff --git a/matlab/D3D/gdat_d3d.m b/matlab/D3D/gdat_d3d.m
index a4fe1657e61f1cc9f87a582c1f75707723aa8ab7..89596d87d6e5bbdd0dfa8bc6281957440e43fe17 100644
--- a/matlab/D3D/gdat_d3d.m
+++ b/matlab/D3D/gdat_d3d.m
@@ -359,260 +359,260 @@ elseif strcmp(mapping_for_d3d.method,'expression')
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
elseif strcmp(mapping_for_d3d.method,'switchcase')
switch data_request_eff % not lower(...) since data_request_eff should be lower case already at this stage
- case {'cxrs', 'cxrs_rho'}
- % if 'fit' option is added: 'fit',1, then the fitted profiles are returned which means "_rho" is effectively called
- if ~isfield(gdat_data.gdat_params,'fit') || isempty(gdat_data.gdat_params.fit) || ~isnumeric(gdat_data.gdat_params.fit)
- gdat_data.gdat_params.fit = 0;
- elseif gdat_data.gdat_params.fit==1
- data_request_eff = 'cxrs_rho';
- end
- exp_name_eff = gdat_data.gdat_params.exp_name;
- if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source) || strcmp(upper(gdat_data.gdat_params.source),'CEZ')
- gdat_data.gdat_params.source = 'CEZ';
- r_node = 'R_time';
- z_node = 'z_time';
- elseif strcmp(upper(gdat_data.gdat_params.source),'CMZ')
- gdat_data.gdat_params.source = 'CMZ';
- r_node = 'R';
- z_node = 'z';
- else
- warning(['source = ' gdat_data.gdat_params.source ' not expected with data_request= ' data_request_eff]);
- return
- end
- diag_name = gdat_data.gdat_params.source;
- % R, Z positions of measurements
- try
- [r_time]=sf2ab(diag_name,shot,r_node,'-exp',exp_name_eff);
- catch ME_R_time
- % assume no shotfile
- getReport(ME_R_time,'basic');
- return
- end
- gdat_data.r = r_time.value{1};
- inotok=find(gdat_data.r<=0);
- gdat_data.r(inotok) = NaN;
- [z_time]=sf2ab(diag_name,shot,z_node,'-exp',exp_name_eff);
- gdat_data.z = z_time.value{1};
- inotok=find(gdat_data.z<=0);
- gdat_data.z(inotok) = NaN;
- [time]=sf2tb(diag_name,shot,'time','-exp',exp_name_eff);
- gdat_data.t = time.value;
- gdat_data.dim{1} = {gdat_data.r , gdat_data.z};
- gdat_data.dimunits{1} = 'R, Z [m]';
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits{2} = 't [s]';
- gdat_data.x = gdat_data.dim{1};
- % vrot
- [a,error_status]=rdaD3D_eff(shot,diag_name,'vrot',exp_name_eff);
- if isempty(a.data) || isempty(a.t) || error_status>0
- if gdat_params.nverbose>=3;
- a
- disp(['with data_request= ' data_request_eff])
+ case {'cxrs', 'cxrs_rho'}
+ % if 'fit' option is added: 'fit',1, then the fitted profiles are returned which means "_rho" is effectively called
+ if ~isfield(gdat_data.gdat_params,'fit') || isempty(gdat_data.gdat_params.fit) || ~isnumeric(gdat_data.gdat_params.fit)
+ gdat_data.gdat_params.fit = 0;
+ elseif gdat_data.gdat_params.fit==1
+ data_request_eff = 'cxrs_rho';
end
- end
- gdat_data.vrot.data = a.data;
- if any(strcmp(fieldnames(a),'units')); gdat_data.vrot.units=a.units; end
- if any(strcmp(fieldnames(a),'name')); gdat_data.vrot.name=a.name; end
- gdat_data.vrot.label = 'vrot_tor';
- [aerr,e]=rdaD3D_eff(shot,diag_name,'err_vrot',exp_name_eff);
- gdat_data.vrot.error_bar = aerr.data;
- % Ti
- % [a,e]=rdaD3D_eff(shot,diag_name,'Ti',exp_name_eff);
- % [aerr,e]=rdaD3D_eff(shot,diag_name,'err_Ti',exp_name_eff);
- [a,e]=rdaD3D_eff(shot,diag_name,'Ti_c',exp_name_eff);
- [aerr,e]=rdaD3D_eff(shot,diag_name,'err_Ti_c',exp_name_eff);
- gdat_data.ti.data = a.data;
- gdat_data.data = a.data;
- gdat_data.label = [gdat_data.label '/Ti'];
- if any(strcmp(fieldnames(a),'units')); gdat_data.ti.units=a.units; end
- if any(strcmp(fieldnames(a),'units')); gdat_data.units=a.units; end
- if any(strcmp(fieldnames(a),'name')); gdat_data.ti.name=a.name; end
- gdat_data.ti.label = 'Ti_c';
- gdat_data.ti.error_bar = aerr.data;
- gdat_data.error_bar = aerr.data;
- gdat_data.data_fullpath=[exp_name_eff '/' diag_name '/' a.name ';vrot, Ti in data, {r;z} in .x'];
- %
- if strcmp(data_request_eff,'cxrs_rho')
- params_equil = gdat_data.gdat_params;
- params_equil.data_request = 'equil';
- [equil,params_equil,error_status] = gdat_d3d(shot,params_equil);
- if error_status>0
- if gdat_params.nverbose>=3; disp(['problems with ' params_equil.data_request]); end
- return
+ exp_name_eff = gdat_data.gdat_params.exp_name;
+ if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source) || strcmp(upper(gdat_data.gdat_params.source),'CEZ')
+ gdat_data.gdat_params.source = 'CEZ';
+ r_node = 'R_time';
+ z_node = 'z_time';
+ elseif strcmp(upper(gdat_data.gdat_params.source),'CMZ')
+ gdat_data.gdat_params.source = 'CMZ';
+ r_node = 'R';
+ z_node = 'z';
+ else
+ warning(['source = ' gdat_data.gdat_params.source ' not expected with data_request= ' data_request_eff]);
+ return
end
- gdat_data.gdat_params.equil = params_equil.equil;
- gdat_data.equil = equil;
- inb_chord_cxrs=size(gdat_data.data,1);
- inb_time_cxrs=size(gdat_data.data,2);
- psi_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- rhopolnorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- rhotornorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- rhovolnorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
- % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
- time_equil=[min(gdat_data.t(1)-0.1,equil.t(1)-0.1) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) max(equil.t(end)+0.1,gdat_data.t(end)+0.1)];
- iok=find(~isnan(gdat_data.r(:,1)));
- for itequil=1:length(time_equil)-1
- rr=equil.Rmesh(:,itequil);
- zz=equil.Zmesh(:,itequil);
- psirz_in = equil.psi2D(:,:,itequil);
- it_cxrs_inequil = find(gdat_data.t>time_equil(itequil) & gdat_data.t<=time_equil(itequil+1));
- if ~isempty(it_cxrs_inequil)
- if strcmp(upper(gdat_data.gdat_params.source),'CEZ')
- rout=gdat_data.r(iok,it_cxrs_inequil);
- zout=gdat_data.z(iok,it_cxrs_inequil);
- else
- rout=gdat_data.r(iok);
- zout=gdat_data.z(iok);
- end
- psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout,zout);
- if strcmp(upper(gdat_data.gdat_params.source),'CEZ')
- psi_out(iok,it_cxrs_inequil) = reshape(psi_at_routzout,length(iok),length(it_cxrs_inequil));
- else
- psi_out(iok,it_cxrs_inequil) = repmat(psi_at_routzout,[1,length(it_cxrs_inequil)]);
- end
- rhopolnorm_out(iok,it_cxrs_inequil) = sqrt((psi_out(iok,it_cxrs_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
- for it_cx=1:length(it_cxrs_inequil)
- rhotornorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopolnorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
- rhovolnorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopolnorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
- end
- end
- end
- gdat_data.psi = psi_out;
- gdat_data.rhopolnorm = rhopolnorm_out;
- gdat_data.rhotornorm = rhotornorm_out;
- gdat_data.rhovolnorm = rhovolnorm_out;
- % defaults for fits, so user always gets std structure
- gdat_data.fit.rhotornorm = []; % same for both ti and vrot
- gdat_data.fit.rhopolnorm = [];
- gdat_data.fit.t = [];
- gdat_data.fit.ti.data = [];
- gdat_data.fit.ti.drhotornorm = [];
- gdat_data.fit.vrot.data = [];
- gdat_data.fit.vrot.drhotornorm = [];
- gdat_data.fit.raw.rhotornorm = [];
- gdat_data.fit.raw.ti.data = [];
- gdat_data.fit.raw.vrot.data = [];
- fit_tension_default = -1;
- if isfield(gdat_data.gdat_params,'fit_tension')
- fit_tension = gdat_data.gdat_params.fit_tension;
+ diag_name = gdat_data.gdat_params.source;
+ % R, Z positions of measurements
+ try
+ [r_time]=sf2ab(diag_name,shot,r_node,'-exp',exp_name_eff);
+ catch ME_R_time
+ % assume no shotfile
+ getReport(ME_R_time,'basic');
+ return
+ end
+ gdat_data.r = r_time.value{1};
+ inotok=find(gdat_data.r<=0);
+ gdat_data.r(inotok) = NaN;
+ [z_time]=sf2ab(diag_name,shot,z_node,'-exp',exp_name_eff);
+ gdat_data.z = z_time.value{1};
+ inotok=find(gdat_data.z<=0);
+ gdat_data.z(inotok) = NaN;
+ [time]=sf2tb(diag_name,shot,'time','-exp',exp_name_eff);
+ gdat_data.t = time.value;
+ gdat_data.dim{1} = {gdat_data.r , gdat_data.z};
+ gdat_data.dimunits{1} = 'R, Z [m]';
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits{2} = 't [s]';
+ gdat_data.x = gdat_data.dim{1};
+ % vrot
+ [a,error_status]=rdaD3D_eff(shot,diag_name,'vrot',exp_name_eff);
+ if isempty(a.data) || isempty(a.t) || error_status>0
+ if gdat_params.nverbose>=3;
+ a
+ disp(['with data_request= ' data_request_eff])
+ end
+ end
+ gdat_data.vrot.data = a.data;
+ if any(strcmp(fieldnames(a),'units')); gdat_data.vrot.units=a.units; end
+ if any(strcmp(fieldnames(a),'name')); gdat_data.vrot.name=a.name; end
+ gdat_data.vrot.label = 'vrot_tor';
+ [aerr,e]=rdaD3D_eff(shot,diag_name,'err_vrot',exp_name_eff);
+ gdat_data.vrot.error_bar = aerr.data;
+ % Ti
+ % [a,e]=rdaD3D_eff(shot,diag_name,'Ti',exp_name_eff);
+ % [aerr,e]=rdaD3D_eff(shot,diag_name,'err_Ti',exp_name_eff);
+ [a,e]=rdaD3D_eff(shot,diag_name,'Ti_c',exp_name_eff);
+ [aerr,e]=rdaD3D_eff(shot,diag_name,'err_Ti_c',exp_name_eff);
+ gdat_data.ti.data = a.data;
+ gdat_data.data = a.data;
+ gdat_data.label = [gdat_data.label '/Ti'];
+ if any(strcmp(fieldnames(a),'units')); gdat_data.ti.units=a.units; end
+ if any(strcmp(fieldnames(a),'units')); gdat_data.units=a.units; end
+ if any(strcmp(fieldnames(a),'name')); gdat_data.ti.name=a.name; end
+ gdat_data.ti.label = 'Ti_c';
+ gdat_data.ti.error_bar = aerr.data;
+ gdat_data.error_bar = aerr.data;
+ gdat_data.data_fullpath=[exp_name_eff '/' diag_name '/' a.name ';vrot, Ti in data, {r;z} in .x'];
+ %
+ if strcmp(data_request_eff,'cxrs_rho')
+ params_equil = gdat_data.gdat_params;
+ params_equil.data_request = 'equil';
+ [equil,params_equil,error_status] = gdat_d3d(shot,params_equil);
+ if error_status>0
+ if gdat_params.nverbose>=3; disp(['problems with ' params_equil.data_request]); end
+ return
+ end
+ gdat_data.gdat_params.equil = params_equil.equil;
+ gdat_data.equil = equil;
+ inb_chord_cxrs=size(gdat_data.data,1);
+ inb_time_cxrs=size(gdat_data.data,2);
+ psi_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ rhopolnorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ rhotornorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ rhovolnorm_out = NaN*ones(inb_chord_cxrs,inb_time_cxrs);
+ % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
+ time_equil=[min(gdat_data.t(1)-0.1,equil.t(1)-0.1) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) max(equil.t(end)+0.1,gdat_data.t(end)+0.1)];
+ iok=find(~isnan(gdat_data.r(:,1)));
+ for itequil=1:length(time_equil)-1
+ rr=equil.Rmesh(:,itequil);
+ zz=equil.Zmesh(:,itequil);
+ psirz_in = equil.psi2D(:,:,itequil);
+ it_cxrs_inequil = find(gdat_data.t>time_equil(itequil) & gdat_data.t<=time_equil(itequil+1));
+ if ~isempty(it_cxrs_inequil)
+ if strcmp(upper(gdat_data.gdat_params.source),'CEZ')
+ rout=gdat_data.r(iok,it_cxrs_inequil);
+ zout=gdat_data.z(iok,it_cxrs_inequil);
+ else
+ rout=gdat_data.r(iok);
+ zout=gdat_data.z(iok);
+ end
+ psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout,zout);
+ if strcmp(upper(gdat_data.gdat_params.source),'CEZ')
+ psi_out(iok,it_cxrs_inequil) = reshape(psi_at_routzout,length(iok),length(it_cxrs_inequil));
+ else
+ psi_out(iok,it_cxrs_inequil) = repmat(psi_at_routzout,[1,length(it_cxrs_inequil)]);
+ end
+ rhopolnorm_out(iok,it_cxrs_inequil) = sqrt((psi_out(iok,it_cxrs_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
+ for it_cx=1:length(it_cxrs_inequil)
+ rhotornorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopolnorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
+ rhovolnorm_out(iok,it_cxrs_inequil(it_cx)) = interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopolnorm_out(iok,it_cxrs_inequil(it_cx)),-3,[2 2],[0 1]);
+ end
+ end
+ end
+ gdat_data.psi = psi_out;
+ gdat_data.rhopolnorm = rhopolnorm_out;
+ gdat_data.rhotornorm = rhotornorm_out;
+ gdat_data.rhovolnorm = rhovolnorm_out;
+ % defaults for fits, so user always gets std structure
+ gdat_data.fit.rhotornorm = []; % same for both ti and vrot
+ gdat_data.fit.rhopolnorm = [];
+ gdat_data.fit.t = [];
+ gdat_data.fit.ti.data = [];
+ gdat_data.fit.ti.drhotornorm = [];
+ gdat_data.fit.vrot.data = [];
+ gdat_data.fit.vrot.drhotornorm = [];
+ gdat_data.fit.raw.rhotornorm = [];
+ gdat_data.fit.raw.ti.data = [];
+ gdat_data.fit.raw.vrot.data = [];
+ fit_tension_default = -1;
+ if isfield(gdat_data.gdat_params,'fit_tension')
+ fit_tension = gdat_data.gdat_params.fit_tension;
+ else
+ fit_tension = fit_tension_default;
+ end
+ if ~isstruct(fit_tension)
+ fit_tension_eff.ti = fit_tension;
+ fit_tension_eff.vrot = fit_tension;
+ fit_tension = fit_tension_eff;
+ else
+ if ~isfield(fit_tension,'ti'); fit_tension.ti = fit_tension_default; end
+ if ~isfield(fit_tension,'vrot '); fit_tension.vrot = fit_tension_default; end
+ end
+ gdat_data.gdat_params.fit_tension = fit_tension;
+ if isfield(gdat_data.gdat_params,'fit_nb_rho_points')
+ fit_nb_rho_points = gdat_data.gdat_params.fit_nb_rho_points;
+ else
+ fit_nb_rho_points = 201;
+ end
+ gdat_data.gdat_params.fit_nb_rho_points = fit_nb_rho_points;
+ %
+ if gdat_data.gdat_params.fit==1
+ % add fits
+ gdat_data.fit.raw.rhotornorm = NaN*ones(size(gdat_data.ti.data));
+ gdat_data.fit.raw.ti.data = NaN*ones(size(gdat_data.ti.data));
+ gdat_data.fit.raw.vrot.data = NaN*ones(size(gdat_data.vrot.data));
+ rhotornormfit = linspace(0,1,fit_nb_rho_points)';
+ gdat_data.fit.rhotornorm = rhotornormfit;
+ gdat_data.fit.t = gdat_data.t;
+ for it=1:length(gdat_data.t)
+ % make rhotor->rhopol transformation for each time since equilibrium might have changed
+ irhook=find(gdat_data.rhotornorm(:,it)>0 & gdat_data.rhotornorm(:,it)<1); % no need for ~isnan
+ [rhoeff isort]=sort(gdat_data.rhotornorm(irhook,it));
+ gdat_data.fit.rhopolnorm(:,it)=interpos([0; rhoeff; 1],[0; gdat_data.rhopolnorm(irhook(isort),it); 1],rhotornormfit,-0.1,[2 2],[0 1]);
+ idata = find(gdat_data.ti.data(:,it)>0 & gdat_data.rhotornorm(:,it)<1.01);
+ if length(idata)>0
+ gdat_data.fit.ti.raw.rhotornorm(idata,it) = gdat_data.rhotornorm(idata,it);
+ gdat_data.fit.ti.raw.data(idata,it) = gdat_data.ti.data(idata,it);
+ gdat_data.fit.ti.raw.error_bar(idata,it) = gdat_data.ti.error_bar(idata,it);
+ gdat_data.fit.vrot.raw.rhotornorm(idata,it) = gdat_data.rhotornorm(idata,it);
+ gdat_data.fit.vrot.raw.data(idata,it) = gdat_data.vrot.data(idata,it);
+ gdat_data.fit.vrot.raw.error_bar(idata,it) = gdat_data.vrot.error_bar(idata,it);
+ [rhoeff,irhoeff] = sort(gdat_data.rhotornorm(idata,it));
+ rhoeff = [0; rhoeff];
+ % they are some strange low error_bars, so remove these by max(Ti/error_bar)<=10; and changing it to large error bar
+ tieff = gdat_data.ti.data(idata(irhoeff),it);
+ ti_err_eff = gdat_data.ti.error_bar(idata(irhoeff),it);
+ ij=find(tieff./ti_err_eff>10.);
+ if ~isempty(ij); ti_err_eff(ij) = tieff(ij)./0.1; end
+ vroteff = gdat_data.vrot.data(idata(irhoeff),it);
+ vrot_err_eff = gdat_data.vrot.error_bar(idata(irhoeff),it);
+ ij=find(vroteff./vrot_err_eff>10.);
+ if ~isempty(ij); vrot_err_eff(ij) = vroteff(ij)./0.1; end
+ %
+ tieff = [tieff(1); tieff];
+ ti_err_eff = [1e4; ti_err_eff];
+ vroteff = [vroteff(1); vroteff];
+ vrot_err_eff = [1e5; vrot_err_eff];
+ [gdat_data.fit.ti.data(:,it), gdat_data.fit.ti.drhotornorm(:,it)] = interpos(rhoeff,tieff,rhotornormfit,fit_tension.ti,[1 0],[0 0],ti_err_eff);
+ [gdat_data.fit.vrot.data(:,it), gdat_data.fit.vrot.drhotornorm(:,it)] = interpos(rhoeff,vroteff,rhotornormfit,fit_tension.vrot,[1 0],[0 0],vrot_err_eff);
+ end
+ end
+ end
+ end
+
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'ece', 'ece_rho'}
+ nth_points = 13;
+ if isfield(gdat_data.gdat_params,'nth_points') && ~isempty(gdat_data.gdat_params.nth_points)
+ nth_points = gdat_data.gdat_params.nth_points;
else
- fit_tension = fit_tension_default;
+ gdat_data.gdat_params.nth_points = nth_points;
end
- if ~isstruct(fit_tension)
- fit_tension_eff.ti = fit_tension;
- fit_tension_eff.vrot = fit_tension;
- fit_tension = fit_tension_eff;
+ channels = -1;
+ if isfield(gdat_data.gdat_params,'channels') && ~isempty(gdat_data.gdat_params.channels)
+ channels = gdat_data.gdat_params.channels;
+ end
+ diag_name = 'ece';
+ if nth_points>=10
+ match_rz_to_time = 1;
else
- if ~isfield(fit_tension,'ti'); fit_tension.ti = fit_tension_default; end
- if ~isfield(fit_tension,'vrot '); fit_tension.vrot = fit_tension_default; end
+ match_rz_to_time = 0;
end
- gdat_data.gdat_params.fit_tension = fit_tension;
- if isfield(gdat_data.gdat_params,'fit_nb_rho_points')
- fit_nb_rho_points = gdat_data.gdat_params.fit_nb_rho_points;
+ if isfield(gdat_data.gdat_params,'match_rz_to_time') && ~isempty(gdat_data.gdat_params.match_rz_to_time)
+ match_rz_to_time = gdat_data.gdat_params.match_rz_to_time;
else
- fit_nb_rho_points = 201;
+ gdat_data.gdat_params.match_rz_to_time = match_rz_to_time;
+ end
+ time_interval = [-Inf +Inf];
+ if isfield(gdat_data.gdat_params,'time_interval') && ~isempty(gdat_data.gdat_params.time_interval)
+ time_interval = gdat_data.gdat_params.time_interval;
+ else
+ gdat_data.gdat_params.time_interval = time_interval;
end
- gdat_data.gdat_params.fit_nb_rho_points = fit_nb_rho_points;
%
- if gdat_data.gdat_params.fit==1
- % add fits
- gdat_data.fit.raw.rhotornorm = NaN*ones(size(gdat_data.ti.data));
- gdat_data.fit.raw.ti.data = NaN*ones(size(gdat_data.ti.data));
- gdat_data.fit.raw.vrot.data = NaN*ones(size(gdat_data.vrot.data));
- rhotornormfit = linspace(0,1,fit_nb_rho_points)';
- gdat_data.fit.rhotornorm = rhotornormfit;
- gdat_data.fit.t = gdat_data.t;
- for it=1:length(gdat_data.t)
- % make rhotor->rhopol transformation for each time since equilibrium might have changed
- irhook=find(gdat_data.rhotornorm(:,it)>0 & gdat_data.rhotornorm(:,it)<1); % no need for ~isnan
- [rhoeff isort]=sort(gdat_data.rhotornorm(irhook,it));
- gdat_data.fit.rhopolnorm(:,it)=interpos([0; rhoeff; 1],[0; gdat_data.rhopolnorm(irhook(isort),it); 1],rhotornormfit,-0.1,[2 2],[0 1]);
- idata = find(gdat_data.ti.data(:,it)>0 & gdat_data.rhotornorm(:,it)<1.01);
- if length(idata)>0
- gdat_data.fit.ti.raw.rhotornorm(idata,it) = gdat_data.rhotornorm(idata,it);
- gdat_data.fit.ti.raw.data(idata,it) = gdat_data.ti.data(idata,it);
- gdat_data.fit.ti.raw.error_bar(idata,it) = gdat_data.ti.error_bar(idata,it);
- gdat_data.fit.vrot.raw.rhotornorm(idata,it) = gdat_data.rhotornorm(idata,it);
- gdat_data.fit.vrot.raw.data(idata,it) = gdat_data.vrot.data(idata,it);
- gdat_data.fit.vrot.raw.error_bar(idata,it) = gdat_data.vrot.error_bar(idata,it);
- [rhoeff,irhoeff] = sort(gdat_data.rhotornorm(idata,it));
- rhoeff = [0; rhoeff];
- % they are some strange low error_bars, so remove these by max(Ti/error_bar)<=10; and changing it to large error bar
- tieff = gdat_data.ti.data(idata(irhoeff),it);
- ti_err_eff = gdat_data.ti.error_bar(idata(irhoeff),it);
- ij=find(tieff./ti_err_eff>10.);
- if ~isempty(ij); ti_err_eff(ij) = tieff(ij)./0.1; end
- vroteff = gdat_data.vrot.data(idata(irhoeff),it);
- vrot_err_eff = gdat_data.vrot.error_bar(idata(irhoeff),it);
- ij=find(vroteff./vrot_err_eff>10.);
- if ~isempty(ij); vrot_err_eff(ij) = vroteff(ij)./0.1; end
- %
- tieff = [tieff(1); tieff];
- ti_err_eff = [1e4; ti_err_eff];
- vroteff = [vroteff(1); vroteff];
- vrot_err_eff = [1e5; vrot_err_eff];
- [gdat_data.fit.ti.data(:,it), gdat_data.fit.ti.drhotornorm(:,it)] = interpos(rhoeff,tieff,rhotornormfit,fit_tension.ti,[1 0],[0 0],ti_err_eff);
- [gdat_data.fit.vrot.data(:,it), gdat_data.fit.vrot.drhotornorm(:,it)] = interpos(rhoeff,vroteff,rhotornormfit,fit_tension.vrot,[1 0],[0 0],vrot_err_eff);
- end
- end
+ if channels(1)<=0
+ channels = [1:40];
end
- end
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'ece', 'ece_rho'}
- nth_points = 13;
- if isfield(gdat_data.gdat_params,'nth_points') && ~isempty(gdat_data.gdat_params.nth_points)
- nth_points = gdat_data.gdat_params.nth_points;
- else
- gdat_data.gdat_params.nth_points = nth_points;
- end
- channels = -1;
- if isfield(gdat_data.gdat_params,'channels') && ~isempty(gdat_data.gdat_params.channels)
- channels = gdat_data.gdat_params.channels;
- end
- diag_name = 'ece';
- if nth_points>=10
- match_rz_to_time = 1;
- else
- match_rz_to_time = 0;
- end
- if isfield(gdat_data.gdat_params,'match_rz_to_time') && ~isempty(gdat_data.gdat_params.match_rz_to_time)
- match_rz_to_time = gdat_data.gdat_params.match_rz_to_time;
- else
- gdat_data.gdat_params.match_rz_to_time = match_rz_to_time;
- end
- time_interval = [-Inf +Inf];
- if isfield(gdat_data.gdat_params,'time_interval') && ~isempty(gdat_data.gdat_params.time_interval)
- time_interval = gdat_data.gdat_params.time_interval;
- else
- gdat_data.gdat_params.time_interval = time_interval;
- end
- %
- if channels(1)<=0
- channels = [1:40];
- end
- chanelles=sort(channels);
- gdat_data.dim{1} = channels;
- gdat_data.gdat_params.channels = channels;
- for i=channels
- a = gdat_d3d(shot,{'ece',['\tece' num2str(i,'%.2d')]});
- if nth_points>1
- gdat_data.data(i,:) = a.data(1:nth_points:end);
- gdat_data.dim{2} = a.t(1:nth_points:end);
- else
- gdat_data.data(i,:) = a.data;
- gdat_data.dim{2} = a.t;
+ chanelles=sort(channels);
+ gdat_data.dim{1} = channels;
+ gdat_data.gdat_params.channels = channels;
+ for i=channels
+ a = gdat_d3d(shot,{'ece',['\tece' num2str(i,'%.2d')]});
+ if nth_points>1
+ gdat_data.data(i,:) = a.data(1:nth_points:end);
+ gdat_data.dim{2} = a.t(1:nth_points:end);
+ else
+ gdat_data.data(i,:) = a.data;
+ gdat_data.dim{2} = a.t;
+ end
end
- end
- gdat_data.x = gdat_data.dim{1};
- gdat_data.t = gdat_data.dim{2};
- gdat_data.dimunits=[{'channels'} ; {'time [s]'}];
- if any(strcmp(fieldnames(a),'units')); gdat_data.units=a.units; end
+ gdat_data.x = gdat_data.dim{1};
+ gdat_data.t = gdat_data.dim{2};
+ gdat_data.dimunits=[{'channels'} ; {'time [s]'}];
+ if any(strcmp(fieldnames(a),'units')); gdat_data.units=a.units; end
% $$$ if match_rz_to_time
% $$$ % interpolate R structure on ece data time array, to ease plot vs R
% $$$ for i=1:length(channels)
-% $$$ radius.data(i,:) = interp1(aR.t,aR.data(channels(i),:),gdat_data.t);
-% $$$ zheight.data(i,:) = interp1(aZ.t,aZ.data(channels(i),:),gdat_data.t);
+% $$$ radius.data(i,:) = interp1(aR.t,aR.data(channels(i),:),gdat_data.t);
+% $$$ zheight.data(i,:) = interp1(aZ.t,aZ.data(channels(i),:),gdat_data.t);
% $$$ end
% $$$ radiuszheight.t=gdat_data.t;
% $$$ else
@@ -620,12 +620,12 @@ elseif strcmp(mapping_for_d3d.method,'switchcase')
% $$$ radiuszheight.t=aR.t;
% $$$ zheight.data = aZ.data(channels,:);
% $$$ end
- ij=find(gdat_data.data<=0);
- gdat_data.data(ij)=NaN;
+ ij=find(gdat_data.data<=0);
+ gdat_data.data(ij)=NaN;
% $$$ gdat_data.rz.r=radius.data;
% $$$ gdat_data.rz.z=zheight.data;
% $$$ gdat_data.rz.t = radiuszheight.t;
- gdat_data.data_fullpath = [diag_name '\tece' num2str(channels(1)) '...' num2str(channels(end))];
+ gdat_data.data_fullpath = [diag_name '\tece' num2str(channels(1)) '...' num2str(channels(end))];
% $$$ gdat_data.rhos.psi = psi_out;
% $$$ gdat_data.rhos.rhopolnorm = rhopolnorm_out;
@@ -634,1208 +634,1208 @@ elseif strcmp(mapping_for_d3d.method,'switchcase')
% $$$ gdat_data.rhos.t = gdat_data.rz.t;
% $$$ end
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'eqdsk'}
- %
- time_eqdsks=2000.; % default time
- if isfield(gdat_data.gdat_params,'time') && ~isempty(gdat_data.gdat_params.time)
- time_eqdsks = gdat_data.gdat_params.time;
- else
- gdat_data.gdat_params.time = time_eqdsks;
- disp(['"time" is expected as an option, choose default time = ' num2str(time_eqdsks)]);
- end
- if time_eqdsks < 10;
- % assume given in seconds, d3d time is in ms
- time_eqdsks = time_eqdsks * 1e3;
- end
- gdat_data.gdat_params.time = time_eqdsks;
- gdat_data.t = time_eqdsks;
- zshift = 0.;
- if isfield(gdat_data.gdat_params,'zshift') && ~isempty(gdat_data.gdat_params.zshift)
- zshift = gdat_data.gdat_params.zshift;
- else
- gdat_data.gdat_params.zshift = zshift;
- end
- gdat_data.gdat_params.zshift = zshift;
- params_equil = gdat_data.gdat_params;
- params_equil.data_request = 'equil';
- [equil,params_equil,error_status] = gdat_d3d(shot,params_equil);
- if error_status>0
- if gdat_params.nverbose>=3; disp(['problems with ' params_equil.data_request]); end
- return
- end
- gdat_data.gdat_params = params_equil;
- gdat_data.equil = equil;
- for itime=1:length(time_eqdsks)
- time_eff = time_eqdsks(itime);
- % use read_results updated to effectively obtain an eqdsk with sign correct with COCOS=2
- [eqdskD3D, equil_all_t, equil_t_index]=get_eqdsk_d3d(equil,time_eff,gdat_data.gdat_params.zshift,'source',gdat_data.gdat_params.equil);
- eqdskD3D.fnamefull = fullfile(['/tmp/' getenv('USER')],['EQDSK_' num2str(shot) 't' num2str(time_eff,'%.4f')]);
- cocos_out = equil.cocos;
- if isfield(gdat_data.gdat_params,'cocos') && ~isempty(gdat_data.gdat_params.cocos)
- cocos_out = gdat_data.gdat_params.cocos;
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'eqdsk'}
+ %
+ time_eqdsks=2000.; % default time
+ if isfield(gdat_data.gdat_params,'time') && ~isempty(gdat_data.gdat_params.time)
+ time_eqdsks = gdat_data.gdat_params.time;
else
- gdat_data.gdat_params.cocos = cocos_out;
+ gdat_data.gdat_params.time = time_eqdsks;
+ disp(['"time" is expected as an option, choose default time = ' num2str(time_eqdsks)]);
end
- if equil.cocos ~= cocos_out
- [eqdsk_cocosout, eqdsk_cocosout_IpB0pos,cocos_inout]=eqdsk_cocos_transform(eqdskD3D,[equil.cocos cocos_out]);
+ if time_eqdsks < 10;
+ % assume given in seconds, d3d time is in ms
+ time_eqdsks = time_eqdsks * 1e3;
+ end
+ gdat_data.gdat_params.time = time_eqdsks;
+ gdat_data.t = time_eqdsks;
+ zshift = 0.;
+ if isfield(gdat_data.gdat_params,'zshift') && ~isempty(gdat_data.gdat_params.zshift)
+ zshift = gdat_data.gdat_params.zshift;
else
- eqdsk_cocosout = eqdskD3D;
- end
- % for several times, use array of structure for eqdsks,
- % cannot use it for psi(R,Z) in .data and .x since R, Z might be different at different times,
- % so project psi(R,Z) on Rmesh, Zmesh of 1st time
- if length(time_eqdsks) > 1
- gdat_data.eqdsk{itime} = write_eqdsk(eqdskD3D.fnamefull,eqdsk_cocosout);
- if itime==1
- gdat_data.data(:,:,itime) = gdat_data.eqdsk{itime}.psi;
- gdat_data.dim{1} = gdat_data.eqdsk{itime}.rmesh;
- gdat_data.dim{2} = gdat_data.eqdsk{itime}.zmesh;
+ gdat_data.gdat_params.zshift = zshift;
+ end
+ gdat_data.gdat_params.zshift = zshift;
+ params_equil = gdat_data.gdat_params;
+ params_equil.data_request = 'equil';
+ [equil,params_equil,error_status] = gdat_d3d(shot,params_equil);
+ if error_status>0
+ if gdat_params.nverbose>=3; disp(['problems with ' params_equil.data_request]); end
+ return
+ end
+ gdat_data.gdat_params = params_equil;
+ gdat_data.equil = equil;
+ for itime=1:length(time_eqdsks)
+ time_eff = time_eqdsks(itime);
+ % use read_results updated to effectively obtain an eqdsk with sign correct with COCOS=2
+ [eqdskD3D, equil_all_t, equil_t_index]=get_eqdsk_d3d(equil,time_eff,gdat_data.gdat_params.zshift,'source',gdat_data.gdat_params.equil);
+ eqdskD3D.fnamefull = fullfile(['/tmp/' getenv('USER')],['EQDSK_' num2str(shot) 't' num2str(time_eff,'%.4f')]);
+ cocos_out = equil.cocos;
+ if isfield(gdat_data.gdat_params,'cocos') && ~isempty(gdat_data.gdat_params.cocos)
+ cocos_out = gdat_data.gdat_params.cocos;
else
- xx=repmat(reshape(gdat_data.dim{1},length(gdat_data.dim{1}),1),1,size(gdat_data.eqdsk{itime}.psi,2));
- yy=repmat(reshape(gdat_data.dim{2},1,length(gdat_data.dim{2})),size(gdat_data.eqdsk{itime}.psi,1),1);
- aa = interpos2Dcartesian(gdat_data.eqdsk{itime}.rmesh,gdat_data.eqdsk{itime}.zmesh ...
- ,gdat_data.eqdsk{itime}.psi,xx,yy,-1,-1);
- gdat_data.data(:,:,itime) = aa;
+ gdat_data.gdat_params.cocos = cocos_out;
+ end
+ if equil.cocos ~= cocos_out
+ [eqdsk_cocosout, eqdsk_cocosout_IpB0pos,cocos_inout]=eqdsk_cocos_transform(eqdskD3D,[equil.cocos cocos_out]);
+ else
+ eqdsk_cocosout = eqdskD3D;
+ end
+ % for several times, use array of structure for eqdsks,
+ % cannot use it for psi(R,Z) in .data and .x since R, Z might be different at different times,
+ % so project psi(R,Z) on Rmesh, Zmesh of 1st time
+ if length(time_eqdsks) > 1
+ gdat_data.eqdsk{itime} = write_eqdsk(eqdskD3D.fnamefull,eqdsk_cocosout);
+ if itime==1
+ gdat_data.data(:,:,itime) = gdat_data.eqdsk{itime}.psi;
+ gdat_data.dim{1} = gdat_data.eqdsk{itime}.rmesh;
+ gdat_data.dim{2} = gdat_data.eqdsk{itime}.zmesh;
+ else
+ xx=repmat(reshape(gdat_data.dim{1},length(gdat_data.dim{1}),1),1,size(gdat_data.eqdsk{itime}.psi,2));
+ yy=repmat(reshape(gdat_data.dim{2},1,length(gdat_data.dim{2})),size(gdat_data.eqdsk{itime}.psi,1),1);
+ aa = interpos2Dcartesian(gdat_data.eqdsk{itime}.rmesh,gdat_data.eqdsk{itime}.zmesh ...
+ ,gdat_data.eqdsk{itime}.psi,xx,yy,-1,-1);
+ gdat_data.data(:,:,itime) = aa;
+ end
+ else
+ gdat_data.eqdsk = write_eqdsk(eqdskD3D.fnamefull,eqdsk_cocosout);
+ gdat_data.data = gdat_data.eqdsk.psi;
+ gdat_data.dim{1} = gdat_data.eqdsk.rmesh;
+ gdat_data.dim{2} = gdat_data.eqdsk.zmesh;
end
- else
- gdat_data.eqdsk = write_eqdsk(eqdskD3D.fnamefull,eqdsk_cocosout);
- gdat_data.data = gdat_data.eqdsk.psi;
- gdat_data.dim{1} = gdat_data.eqdsk.rmesh;
- gdat_data.dim{2} = gdat_data.eqdsk.zmesh;
end
- end
- gdat_data.dim{3} = gdat_data.t;
- gdat_data.x = gdat_data.dim(1:2);
- gdat_data.data_fullpath=['psi(R,Z) and eqdsk from geteqdskD3D with ' gdat_data.gdat_params.equil ' ;zshift=' num2str(zshift)];
- gdat_data.units = 'T m^2';
- gdat_data.dimunits = {'m','m','s'};
- gdat_data.request_description = ['data=psi, x=(R,Z), eqdsk contains eqdsk structure with which ' ...
+ gdat_data.dim{3} = gdat_data.t;
+ gdat_data.x = gdat_data.dim(1:2);
+ gdat_data.data_fullpath=['psi(R,Z) and eqdsk from geteqdskD3D with ' gdat_data.gdat_params.equil ' ;zshift=' num2str(zshift)];
+ gdat_data.units = 'T m^2';
+ gdat_data.dimunits = {'m','m','s'};
+ gdat_data.request_description = ['data=psi, x=(R,Z), eqdsk contains eqdsk structure with which ' ...
'plot_eqdsk, write_eqdsk, read_eqdsk can be used'];
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'equil'}
- if ~isfield(gdat_data.gdat_params,'equil') || isempty(gdat_data.gdat_params.equil) || ~ischar(gdat_data.gdat_params.equil)
- gdat_data.gdat_params.equil = 'efit03';
- else
- end
- if exist('read_mds_eq_func')<=0
- if gdat_params.nverbose>=3; disp(['addpath(''/m/GAtools/matlab/efit'',''end'') since needs function read_mds_eq_func']); end
- addpath('/m/GAtools/matlab/efit','end');
- end
- [equil_all_t,neq,eq,ier]=read_mds_eq_func(shot,gdat_data.gdat_params.equil,'d3d');
- gdat_data.rhovolnorm = eq.results.geqdsk.rhovn;
- gdat_data.equil_all_t = equil_all_t;
- gdat_data.eq_raw = eq;
- % extract main parameters, can add more later
- gdat_data.phi = [];
- gdat_data.rhotornorm = [];
- gdat_data.t = equil_all_t.time;
- for it=1:length(equil_all_t.time)
- gdat_data.qvalue(:,it) = equil_all_t.gdata(it).qpsi;
- gdat_data.psi(:,it) = (equil_all_t.gdata(it).ssibry - equil_all_t.gdata(it).ssimag) ...
- .* linspace(0,1,equil_all_t.gdata(it).nw)' + equil_all_t.gdata(it).ssimag;
- gdat_data.psi_axis(it)= equil_all_t.gdata(it).ssimag;
- gdat_data.psi_lcfs(it)= equil_all_t.gdata(it).ssibry;
- gdat_data.rhopolnorm(:,it) = sqrt(abs((gdat_data.psi(:,it)-gdat_data.psi_axis(it)) ./(gdat_data.psi_lcfs(it)-gdat_data.psi_axis(it))));
- gdat_data.rhopolnorm(end,it) = 1.;
- gdat_data.vol(:,it)=gdat_data.rhovolnorm(:,it).^2 .* eq.results.aeqdsk.volume(it);
- gdat_data.Rmesh(:,it) = eq.results.geqdsk.r;
- gdat_data.Zmesh(:,it) = eq.results.geqdsk.z;
- gdat_data.psi2D(:,:,it) = equil_all_t.gdata(it).psirz;
- gdat_data.pressure(:,it) = equil_all_t.gdata(it).pres;
- gdat_data.dpressuredpsi(:,it) = equil_all_t.gdata(it).pprime; % 2nd index are dV/dpsi
- gdat_data.ffprime(:,it) = equil_all_t.gdata(it).ffprim;
- gdat_data.rwall(:,it) = equil_all_t.gdata(it).xlim;
- gdat_data.zwall(:,it) = equil_all_t.gdata(it).ylim;
- if equil_all_t.adata(it).rxpt1 < -9.5
- gdat_data.R_Xpoints(:,it,1) = NaN;
- else
- gdat_data.R_Xpoints(:,it,1) = equil_all_t.adata(it).rxpt1;
- end
- if equil_all_t.adata(it).rxpt1 < -9.5
- gdat_data.Z_Xpoints(:,it,1) = NaN;
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'equil'}
+ if ~isfield(gdat_data.gdat_params,'equil') || isempty(gdat_data.gdat_params.equil) || ~ischar(gdat_data.gdat_params.equil)
+ gdat_data.gdat_params.equil = 'efit03';
else
- gdat_data.Z_Xpoints(:,it,1) = equil_all_t.adata(it).zxpt1;
end
- if equil_all_t.adata(it).rxpt2 < -9.5
- gdat_data.R_Xpoints(:,it,2) = NaN;
- else
- gdat_data.R_Xpoints(:,it,2) = equil_all_t.adata(it).rxpt2;
+ if exist('read_mds_eq_func')<=0
+ if gdat_params.nverbose>=3; disp(['addpath(''/m/GAtools/matlab/efit'',''end'') since needs function read_mds_eq_func']); end
+ addpath('/m/GAtools/matlab/efit','end');
end
- if equil_all_t.adata(it).rxpt2 < -9.5
- gdat_data.Z_Xpoints(:,it,2) = NaN;
- else
- gdat_data.Z_Xpoints(:,it,2) = equil_all_t.adata(it).zxpt2;
+ [equil_all_t,neq,eq,ier]=read_mds_eq_func(shot,gdat_data.gdat_params.equil,'d3d');
+ gdat_data.rhovolnorm = eq.results.geqdsk.rhovn;
+ gdat_data.equil_all_t = equil_all_t;
+ gdat_data.eq_raw = eq;
+ % extract main parameters, can add more later
+ gdat_data.phi = [];
+ gdat_data.rhotornorm = [];
+ gdat_data.t = equil_all_t.time;
+ for it=1:length(equil_all_t.time)
+ gdat_data.qvalue(:,it) = equil_all_t.gdata(it).qpsi;
+ gdat_data.psi(:,it) = (equil_all_t.gdata(it).ssibry - equil_all_t.gdata(it).ssimag) ...
+ .* linspace(0,1,equil_all_t.gdata(it).nw)' + equil_all_t.gdata(it).ssimag;
+ gdat_data.psi_axis(it)= equil_all_t.gdata(it).ssimag;
+ gdat_data.psi_lcfs(it)= equil_all_t.gdata(it).ssibry;
+ gdat_data.rhopolnorm(:,it) = sqrt(abs((gdat_data.psi(:,it)-gdat_data.psi_axis(it)) ./(gdat_data.psi_lcfs(it)-gdat_data.psi_axis(it))));
+ gdat_data.rhopolnorm(end,it) = 1.;
+ gdat_data.vol(:,it)=gdat_data.rhovolnorm(:,it).^2 .* eq.results.aeqdsk.volume(it);
+ gdat_data.Rmesh(:,it) = eq.results.geqdsk.r;
+ gdat_data.Zmesh(:,it) = eq.results.geqdsk.z;
+ gdat_data.psi2D(:,:,it) = equil_all_t.gdata(it).psirz;
+ gdat_data.pressure(:,it) = equil_all_t.gdata(it).pres;
+ gdat_data.dpressuredpsi(:,it) = equil_all_t.gdata(it).pprime; % 2nd index are dV/dpsi
+ gdat_data.ffprime(:,it) = equil_all_t.gdata(it).ffprim;
+ gdat_data.rwall(:,it) = equil_all_t.gdata(it).xlim;
+ gdat_data.zwall(:,it) = equil_all_t.gdata(it).ylim;
+ if equil_all_t.adata(it).rxpt1 < -9.5
+ gdat_data.R_Xpoints(:,it,1) = NaN;
+ else
+ gdat_data.R_Xpoints(:,it,1) = equil_all_t.adata(it).rxpt1;
+ end
+ if equil_all_t.adata(it).rxpt1 < -9.5
+ gdat_data.Z_Xpoints(:,it,1) = NaN;
+ else
+ gdat_data.Z_Xpoints(:,it,1) = equil_all_t.adata(it).zxpt1;
+ end
+ if equil_all_t.adata(it).rxpt2 < -9.5
+ gdat_data.R_Xpoints(:,it,2) = NaN;
+ else
+ gdat_data.R_Xpoints(:,it,2) = equil_all_t.adata(it).rxpt2;
+ end
+ if equil_all_t.adata(it).rxpt2 < -9.5
+ gdat_data.Z_Xpoints(:,it,2) = NaN;
+ else
+ gdat_data.Z_Xpoints(:,it,2) = equil_all_t.adata(it).zxpt2;
+ end
+ %
end
+ gdat_data.x = gdat_data.rhopolnorm;
%
- end
- gdat_data.x = gdat_data.rhopolnorm;
- %
- gdat_data.ip = [equil_all_t.gdata(:).cpasma];
- %
- gdat_data.data = gdat_data.qvalue; % put q in data
- gdat_data.units='q'; % not applicable
- gdat_data.data_fullpath = ...
- ['q(:,time) in .data, all from [equil_all_t,neq,eq,ier]=read_mds_eq_func(shot,gdat_data.gdat_params.equil,''d3d'');'];
- gdat_data.cocos = 2;
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits{1} = 'rhopolnorm';
- gdat_data.dimunits{2} = 'time [s]';
+ gdat_data.ip = [equil_all_t.gdata(:).cpasma];
+ %
+ gdat_data.data = gdat_data.qvalue; % put q in data
+ gdat_data.units='q'; % not applicable
+ gdat_data.data_fullpath = ...
+ ['q(:,time) in .data, all from [equil_all_t,neq,eq,ier]=read_mds_eq_func(shot,gdat_data.gdat_params.equil,''d3d'');'];
+ gdat_data.cocos = 2;
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits{1} = 'rhopolnorm';
+ gdat_data.dimunits{2} = 'time [s]';
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'ne','te'}
- exp_name_eff = gdat_data.gdat_params.exp_name;
- % ne or Te from Thomson data on raw z mesh vs (z,t)
- if strcmp(data_request_eff,'te')
- node_leaf = 'TEMP';
- else
- node_leaf = 'DENSITY';
- end
- % core
- nodenameeff = ['TS.BLESSED.CORE:' node_leaf];
- a = gdat_d3d(shot,{'electrons',nodenameeff});
- if isempty(a.data) || isempty(a.t)
- if gdat_params.nverbose>=3;
- a
- disp(['with data_request= ' data_request_eff])
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'ne','te'}
+ exp_name_eff = gdat_data.gdat_params.exp_name;
+ % ne or Te from Thomson data on raw z mesh vs (z,t)
+ if strcmp(data_request_eff,'te')
+ node_leaf = 'TEMP';
+ else
+ node_leaf = 'DENSITY';
end
- return
- end
- gdat_data.t = a.t;
- gdat_data.x = a.x;
- gdat_data.gdat_params.tree = a.gdat_params.tree;
- gdat_data.gdat_params.equil = a.gdat_params.equil;
- if any(strcmp(fieldnames(a),'units'))
- gdat_data.units=a.units;
- end
- gdat_data.core.data = a.data';
- gdat_data.core.t = a.t;
- gdat_data.core.x = a.x;
+ % core
+ nodenameeff = ['TS.BLESSED.CORE:' node_leaf];
+ a = gdat_d3d(shot,{'electrons',nodenameeff});
+ if isempty(a.data) || isempty(a.t)
+ if gdat_params.nverbose>=3;
+ a
+ disp(['with data_request= ' data_request_eff])
+ end
+ return
+ end
+ gdat_data.t = a.t;
+ gdat_data.x = a.x;
+ gdat_data.gdat_params.tree = a.gdat_params.tree;
+ gdat_data.gdat_params.equil = a.gdat_params.equil;
+ if any(strcmp(fieldnames(a),'units'))
+ gdat_data.units=a.units;
+ end
+ gdat_data.core.data = a.data';
+ gdat_data.core.t = a.t;
+ gdat_data.core.x = a.x;
% $$$ gdat_data.(lower(node_child_nameeff)).error_bar = max(aup.value-gdat_data.(lower(node_child_nameeff)).data,gdat_data.(lower(node_child_nameeff)).data-alow.value);
% $$$ [a,error_status]=rdaD3D_eff(shot,'VTA','R_core',exp_name_eff);
% $$$ gdat_data.(lower(node_child_nameeff)).r = repmat(a.data,size(gdat_data.(lower(node_child_nameeff)).data,1),1);
% $$$ [a,error_status]=rdaD3D_eff(shot,'VTA','Z_core',exp_name_eff);
- gdat_data.z = gdat_data.x;
- gdat_data.data_fullpath=[data_request_eff 'from ' nodenameeff];
- nb_core = numel(gdat_data.x);
- gdat_data.data = a.data'; % to get time as 2nd dim
- % gdat_data.data(1:nb_core,:) = gdat_data.data(1:nb_core,:);
- gdat_data.dim=[{gdat_data.z};{gdat_data.t}];
- gdat_data.dimunits=[{'Z [m]'}; {'time [s]'}];
+ gdat_data.z = gdat_data.x;
+ gdat_data.data_fullpath=[data_request_eff 'from ' nodenameeff];
+ nb_core = numel(gdat_data.x);
+ gdat_data.data = a.data'; % to get time as 2nd dim
+ % gdat_data.data(1:nb_core,:) = gdat_data.data(1:nb_core,:);
+ gdat_data.dim=[{gdat_data.z};{gdat_data.t}];
+ gdat_data.dimunits=[{'Z [m]'}; {'time [s]'}];
% $$$ gdat_data.error_bar(1:nb_core,:) = gdat_data.error_bar(1:nb_core,:);
- return
- % add edge part
- nodenameeff_e = [upper(data_request_eff(1)) 'e_e'];
- node_child_nameeff_e = [upper(data_request_eff(1)) 'e_edge'];
- [a,error_status]=rdaD3D_eff(shot,'VTA',nodenameeff_e,exp_name_eff);
- gdat_data.(lower(node_child_nameeff_e)).data = a.data;
- ij_edge_notok = find(a.data>5e21);
- gdat_data.(lower(node_child_nameeff_e)).data(ij_edge_notok) = NaN;
- gdat_data.(lower(node_child_nameeff_e)).t = a.t;
- if ~isempty(a.data)
- [a,error_status]=rdaD3D_eff(shot,'VTA','R_edge',exp_name_eff);
- gdat_data.(lower(node_child_nameeff_e)).r = repmat(a.data,size(gdat_data.(lower(node_child_nameeff_e)).data,1),1);
- [a,error_status]=rdaD3D_eff(shot,'VTA','Z_edge',exp_name_eff);
- gdat_data.(lower(node_child_nameeff_e)).z = repmat(a.data',1,size(gdat_data.(lower(node_child_nameeff_e)).data,2));
- nb_edge = size(gdat_data.(lower(node_child_nameeff_e)).z,1);
- iaaa=iround_os(gdat_data.(lower(node_child_nameeff_e)).t,gdat_data.(lower(node_child_nameeff)).t);
- gdat_data.data(nb_core+1:nb_core+nb_edge,:) = gdat_data.(lower(node_child_nameeff_e)).data(1:nb_edge,iaaa);
- gdat_data.dim{1}(nb_core+1:nb_core+nb_edge,:)=gdat_data.(lower(node_child_nameeff_e)).z(1:nb_edge,iaaa);
- [alow,e]=rdaD3D_eff(shot,'VTA',[upper(data_request_eff(1)) 'elow_e'],exp_name_eff);
- [aup,e]=rdaD3D_eff(shot,'VTA',[upper(data_request_eff(1)) 'eupp_e'],exp_name_eff);
- gdat_data.(lower(node_child_nameeff_e)).error_bar = max(aup.value-gdat_data.(lower(node_child_nameeff_e)).data, ...
- gdat_data.(lower(node_child_nameeff_e)).data-alow.value);
- gdat_data.error_bar(nb_core+1:nb_core+nb_edge,:) = gdat_data.(lower(node_child_nameeff_e)).error_bar(1:nb_edge,iaaa);
- else
- gdat_data.(lower(node_child_nameeff_e)).data = [];
- gdat_data.(lower(node_child_nameeff_e)).t = [];
- gdat_data.(lower(node_child_nameeff_e)).error_bar = [];
- gdat_data.(lower(node_child_nameeff_e)).r = [];
- gdat_data.(lower(node_child_nameeff_e)).z = [];
- end
- gdat_data.x=gdat_data.dim{1};
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'ne_rho', 'te_rho', 'nete_rho'}
- if ~isfield(gdat_data.gdat_params,'fit') || isempty(gdat_data.gdat_params.fit) || ~isnumeric(gdat_data.gdat_params.fit)
- gdat_data.gdat_params.fit = 1; % default do fit
- end
- params_eff = gdat_data.gdat_params;
- params_eff.data_request=data_request_eff(1:2); % start with ne if nete_rho
- % get raw data
- [gdat_data,params_kin,error_status]=gdat_d3d(shot,params_eff);
- gdat_data.gdat_params.data_request=data_request_eff;
- gdat_data.gdat_request=data_request_eff;
- if error_status>0
- if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
return
- end
- % add rho coordinates
- params_eff.data_request='equil';
- [equil,params_equil,error_status]=gdat_d3d(shot,params_eff);
- if error_status>0
- if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
- return
- end
- gdat_data.gdat_params.equil = params_equil.equil;
- %gdat_data.equil = equil;
+ % add edge part
+ nodenameeff_e = [upper(data_request_eff(1)) 'e_e'];
+ node_child_nameeff_e = [upper(data_request_eff(1)) 'e_edge'];
+ [a,error_status]=rdaD3D_eff(shot,'VTA',nodenameeff_e,exp_name_eff);
+ gdat_data.(lower(node_child_nameeff_e)).data = a.data;
+ ij_edge_notok = find(a.data>5e21);
+ gdat_data.(lower(node_child_nameeff_e)).data(ij_edge_notok) = NaN;
+ gdat_data.(lower(node_child_nameeff_e)).t = a.t;
+ if ~isempty(a.data)
+ [a,error_status]=rdaD3D_eff(shot,'VTA','R_edge',exp_name_eff);
+ gdat_data.(lower(node_child_nameeff_e)).r = repmat(a.data,size(gdat_data.(lower(node_child_nameeff_e)).data,1),1);
+ [a,error_status]=rdaD3D_eff(shot,'VTA','Z_edge',exp_name_eff);
+ gdat_data.(lower(node_child_nameeff_e)).z = repmat(a.data',1,size(gdat_data.(lower(node_child_nameeff_e)).data,2));
+ nb_edge = size(gdat_data.(lower(node_child_nameeff_e)).z,1);
+ iaaa=iround_os(gdat_data.(lower(node_child_nameeff_e)).t,gdat_data.(lower(node_child_nameeff)).t);
+ gdat_data.data(nb_core+1:nb_core+nb_edge,:) = gdat_data.(lower(node_child_nameeff_e)).data(1:nb_edge,iaaa);
+ gdat_data.dim{1}(nb_core+1:nb_core+nb_edge,:)=gdat_data.(lower(node_child_nameeff_e)).z(1:nb_edge,iaaa);
+ [alow,e]=rdaD3D_eff(shot,'VTA',[upper(data_request_eff(1)) 'elow_e'],exp_name_eff);
+ [aup,e]=rdaD3D_eff(shot,'VTA',[upper(data_request_eff(1)) 'eupp_e'],exp_name_eff);
+ gdat_data.(lower(node_child_nameeff_e)).error_bar = max(aup.value-gdat_data.(lower(node_child_nameeff_e)).data, ...
+ gdat_data.(lower(node_child_nameeff_e)).data-alow.value);
+ gdat_data.error_bar(nb_core+1:nb_core+nb_edge,:) = gdat_data.(lower(node_child_nameeff_e)).error_bar(1:nb_edge,iaaa);
+ else
+ gdat_data.(lower(node_child_nameeff_e)).data = [];
+ gdat_data.(lower(node_child_nameeff_e)).t = [];
+ gdat_data.(lower(node_child_nameeff_e)).error_bar = [];
+ gdat_data.(lower(node_child_nameeff_e)).r = [];
+ gdat_data.(lower(node_child_nameeff_e)).z = [];
+ end
+ gdat_data.x=gdat_data.dim{1};
- % core
- node_child_nameeff = [upper(data_request_eff(1)) 'e_core'];
- inb_chord_core=size(gdat_data.(lower(node_child_nameeff)).r,1);
- inb_time_core=size(gdat_data.(lower(node_child_nameeff)).r,2);
- psi_out_core = NaN*ones(inb_chord_core,inb_time_core);
- rhopolnorm_out_core = NaN*ones(inb_chord_core,inb_time_core);
- rhotornorm_out_core = NaN*ones(inb_chord_core,inb_time_core);
- rhovolnorm_out_core = NaN*ones(inb_chord_core,inb_time_core);
- % edge
- node_child_nameeff_e = [upper(data_request_eff(1)) 'e_edge'];
- inb_chord_edge=size(gdat_data.(lower(node_child_nameeff_e)).r,1);
- inb_time_edge=size(gdat_data.(lower(node_child_nameeff_e)).r,2);
- psi_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
- rhopolnorm_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
- rhotornorm_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
- rhovolnorm_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
- % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
- time_equil=[min(gdat_data.(lower(node_child_nameeff)).t(1)-0.1,equil.t(1)-0.1) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) max(equil.t(end)+0.1,gdat_data.(lower(node_child_nameeff)).t(end)+0.1)];
- for itequil=1:length(time_equil)-1
- rr=equil.Rmesh(:,itequil);
- zz=equil.Zmesh(:,itequil);
- psirz_in = equil.psi2D(:,:,itequil);
- it_core_inequil = find(gdat_data.(lower(node_child_nameeff)).t>time_equil(itequil) & gdat_data.(lower(node_child_nameeff)).t<=time_equil(itequil+1));
- if ~isempty(it_core_inequil)
- rout_core=gdat_data.(lower(node_child_nameeff)).r(:,it_core_inequil);
- zout_core=gdat_data.(lower(node_child_nameeff)).z(:,it_core_inequil);
- psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_core,zout_core);
- psi_out_core(:,it_core_inequil) = reshape(psi_at_routzout,inb_chord_core,length(it_core_inequil));
- rhopolnorm_out_core(:,it_core_inequil) = sqrt((psi_out_core(:,it_core_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
- for it_cx=1:length(it_core_inequil)
- rhotornorm_out_core(:,it_core_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopolnorm_out_core(:,it_core_inequil(it_cx)),-3,[2 2],[0 1]);
- rhovolnorm_out_core(:,it_core_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopolnorm_out_core(:,it_core_inequil(it_cx)),-3,[2 2],[0 1]);
- end
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'ne_rho', 'te_rho', 'nete_rho'}
+ if ~isfield(gdat_data.gdat_params,'fit') || isempty(gdat_data.gdat_params.fit) || ~isnumeric(gdat_data.gdat_params.fit)
+ gdat_data.gdat_params.fit = 1; % default do fit
+ end
+ params_eff = gdat_data.gdat_params;
+ params_eff.data_request=data_request_eff(1:2); % start with ne if nete_rho
+ % get raw data
+ [gdat_data,params_kin,error_status]=gdat_d3d(shot,params_eff);
+ gdat_data.gdat_params.data_request=data_request_eff;
+ gdat_data.gdat_request=data_request_eff;
+ if error_status>0
+ if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
+ return
end
+ % add rho coordinates
+ params_eff.data_request='equil';
+ [equil,params_equil,error_status]=gdat_d3d(shot,params_eff);
+ if error_status>0
+ if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
+ return
+ end
+ gdat_data.gdat_params.equil = params_equil.equil;
+ %gdat_data.equil = equil;
+
+ % core
+ node_child_nameeff = [upper(data_request_eff(1)) 'e_core'];
+ inb_chord_core=size(gdat_data.(lower(node_child_nameeff)).r,1);
+ inb_time_core=size(gdat_data.(lower(node_child_nameeff)).r,2);
+ psi_out_core = NaN*ones(inb_chord_core,inb_time_core);
+ rhopolnorm_out_core = NaN*ones(inb_chord_core,inb_time_core);
+ rhotornorm_out_core = NaN*ones(inb_chord_core,inb_time_core);
+ rhovolnorm_out_core = NaN*ones(inb_chord_core,inb_time_core);
% edge
- it_edge_inequil = find(gdat_data.(lower(node_child_nameeff_e)).t>time_equil(itequil) & gdat_data.(lower(node_child_nameeff_e)).t<=time_equil(itequil+1));
- if ~isempty(it_edge_inequil)
- rout_edge=gdat_data.(lower(node_child_nameeff_e)).r(:,it_edge_inequil);
- zout_edge=gdat_data.(lower(node_child_nameeff_e)).z(:,it_edge_inequil);
- psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_edge,zout_edge);
- psi_out_edge(:,it_edge_inequil) = reshape(psi_at_routzout,inb_chord_edge,length(it_edge_inequil));
- rhopolnorm_out_edge(:,it_edge_inequil) = sqrt((psi_out_edge(:,it_edge_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
- for it_cx=1:length(it_edge_inequil)
- rhotornorm_out_edge(:,it_edge_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopolnorm_out_edge(:,it_edge_inequil(it_cx)),-3,[2 2],[0 1]);
- rhovolnorm_out_edge(:,it_edge_inequil(it_cx)) = ...
- interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopolnorm_out_edge(:,it_edge_inequil(it_cx)),-3,[2 2],[0 1]);
- end
+ node_child_nameeff_e = [upper(data_request_eff(1)) 'e_edge'];
+ inb_chord_edge=size(gdat_data.(lower(node_child_nameeff_e)).r,1);
+ inb_time_edge=size(gdat_data.(lower(node_child_nameeff_e)).r,2);
+ psi_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
+ rhopolnorm_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
+ rhotornorm_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
+ rhovolnorm_out_edge = NaN*ones(inb_chord_edge,inb_time_edge);
+ % constructs intervals within which a given equil is used: [time_equil(i),time_equil(i+1)]
+ time_equil=[min(gdat_data.(lower(node_child_nameeff)).t(1)-0.1,equil.t(1)-0.1) 0.5.*(equil.t(1:end-1)+equil.t(2:end)) max(equil.t(end)+0.1,gdat_data.(lower(node_child_nameeff)).t(end)+0.1)];
+ for itequil=1:length(time_equil)-1
+ rr=equil.Rmesh(:,itequil);
+ zz=equil.Zmesh(:,itequil);
+ psirz_in = equil.psi2D(:,:,itequil);
+ it_core_inequil = find(gdat_data.(lower(node_child_nameeff)).t>time_equil(itequil) & gdat_data.(lower(node_child_nameeff)).t<=time_equil(itequil+1));
+ if ~isempty(it_core_inequil)
+ rout_core=gdat_data.(lower(node_child_nameeff)).r(:,it_core_inequil);
+ zout_core=gdat_data.(lower(node_child_nameeff)).z(:,it_core_inequil);
+ psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_core,zout_core);
+ psi_out_core(:,it_core_inequil) = reshape(psi_at_routzout,inb_chord_core,length(it_core_inequil));
+ rhopolnorm_out_core(:,it_core_inequil) = sqrt((psi_out_core(:,it_core_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
+ for it_cx=1:length(it_core_inequil)
+ rhotornorm_out_core(:,it_core_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopolnorm_out_core(:,it_core_inequil(it_cx)),-3,[2 2],[0 1]);
+ rhovolnorm_out_core(:,it_core_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopolnorm_out_core(:,it_core_inequil(it_cx)),-3,[2 2],[0 1]);
+ end
+ end
+ % edge
+ it_edge_inequil = find(gdat_data.(lower(node_child_nameeff_e)).t>time_equil(itequil) & gdat_data.(lower(node_child_nameeff_e)).t<=time_equil(itequil+1));
+ if ~isempty(it_edge_inequil)
+ rout_edge=gdat_data.(lower(node_child_nameeff_e)).r(:,it_edge_inequil);
+ zout_edge=gdat_data.(lower(node_child_nameeff_e)).z(:,it_edge_inequil);
+ psi_at_routzout = interpos2Dcartesian(rr,zz,psirz_in,rout_edge,zout_edge);
+ psi_out_edge(:,it_edge_inequil) = reshape(psi_at_routzout,inb_chord_edge,length(it_edge_inequil));
+ rhopolnorm_out_edge(:,it_edge_inequil) = sqrt((psi_out_edge(:,it_edge_inequil)-equil.psi_axis(itequil))./(equil.psi_lcfs(itequil)-equil.psi_axis(itequil)));
+ for it_cx=1:length(it_edge_inequil)
+ rhotornorm_out_edge(:,it_edge_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhotornorm(:,itequil),rhopolnorm_out_edge(:,it_edge_inequil(it_cx)),-3,[2 2],[0 1]);
+ rhovolnorm_out_edge(:,it_edge_inequil(it_cx)) = ...
+ interpos(equil.rhopolnorm(:,itequil),equil.rhovolnorm(:,itequil),rhopolnorm_out_edge(:,it_edge_inequil(it_cx)),-3,[2 2],[0 1]);
+ end
+ end
end
- end
- gdat_data.(lower(node_child_nameeff)).psi = psi_out_core;
- gdat_data.(lower(node_child_nameeff)).rhopolnorm = rhopolnorm_out_core;
- gdat_data.(lower(node_child_nameeff)).rhotornorm = rhotornorm_out_core;
- gdat_data.(lower(node_child_nameeff)).rhovolnorm = rhovolnorm_out_core;
- gdat_data.(lower(node_child_nameeff_e)).psi = psi_out_edge;
- gdat_data.(lower(node_child_nameeff_e)).rhopolnorm = rhopolnorm_out_edge;
- gdat_data.(lower(node_child_nameeff_e)).rhotornorm = rhotornorm_out_edge;
- gdat_data.(lower(node_child_nameeff_e)).rhovolnorm = rhovolnorm_out_edge;
- % put values of rhopolnorm for dim{1} by default, all radial mesh for combined core, edge in grids_1d
- gdat_data.x = gdat_data.(lower(node_child_nameeff)).rhopolnorm;
- iaaa=iround_os(gdat_data.(lower(node_child_nameeff_e)).t,gdat_data.(lower(node_child_nameeff)).t);
- gdat_data.x(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).rhopolnorm(:,iaaa);
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dimunits{1} = 'rhopolnorm';
- gdat_data.grids_1d.rhopolnorm = gdat_data.x;
- gdat_data.grids_1d.psi = gdat_data.(lower(node_child_nameeff)).psi;
- gdat_data.grids_1d.psi(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).psi(:,iaaa);
- gdat_data.grids_1d.rhotornorm = gdat_data.(lower(node_child_nameeff)).rhotornorm;
- gdat_data.grids_1d.rhotornorm(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).rhotornorm(:,iaaa);
- gdat_data.grids_1d.rhovolnorm = gdat_data.(lower(node_child_nameeff)).rhovolnorm;
- gdat_data.grids_1d.rhovolnorm(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).rhovolnorm(:,iaaa);
+ gdat_data.(lower(node_child_nameeff)).psi = psi_out_core;
+ gdat_data.(lower(node_child_nameeff)).rhopolnorm = rhopolnorm_out_core;
+ gdat_data.(lower(node_child_nameeff)).rhotornorm = rhotornorm_out_core;
+ gdat_data.(lower(node_child_nameeff)).rhovolnorm = rhovolnorm_out_core;
+ gdat_data.(lower(node_child_nameeff_e)).psi = psi_out_edge;
+ gdat_data.(lower(node_child_nameeff_e)).rhopolnorm = rhopolnorm_out_edge;
+ gdat_data.(lower(node_child_nameeff_e)).rhotornorm = rhotornorm_out_edge;
+ gdat_data.(lower(node_child_nameeff_e)).rhovolnorm = rhovolnorm_out_edge;
+ % put values of rhopolnorm for dim{1} by default, all radial mesh for combined core, edge in grids_1d
+ gdat_data.x = gdat_data.(lower(node_child_nameeff)).rhopolnorm;
+ iaaa=iround_os(gdat_data.(lower(node_child_nameeff_e)).t,gdat_data.(lower(node_child_nameeff)).t);
+ gdat_data.x(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).rhopolnorm(:,iaaa);
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dimunits{1} = 'rhopolnorm';
+ gdat_data.grids_1d.rhopolnorm = gdat_data.x;
+ gdat_data.grids_1d.psi = gdat_data.(lower(node_child_nameeff)).psi;
+ gdat_data.grids_1d.psi(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).psi(:,iaaa);
+ gdat_data.grids_1d.rhotornorm = gdat_data.(lower(node_child_nameeff)).rhotornorm;
+ gdat_data.grids_1d.rhotornorm(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).rhotornorm(:,iaaa);
+ gdat_data.grids_1d.rhovolnorm = gdat_data.(lower(node_child_nameeff)).rhovolnorm;
+ gdat_data.grids_1d.rhovolnorm(inb_chord_core+1:inb_chord_core+inb_chord_edge,:) = gdat_data.(lower(node_child_nameeff_e)).rhovolnorm(:,iaaa);
- gdat_data.data_fullpath = [gdat_data.data_fullpath ' projected on equilibrium ' gdat_data.gdat_params.equil];
+ gdat_data.data_fullpath = [gdat_data.data_fullpath ' projected on equilibrium ' gdat_data.gdat_params.equil];
- % if nete_rho, copy data as .ne, get .te and put pe=e ne Te in data:
- gdat_data.(data_request_eff(1:2)).data = gdat_data.data;
- gdat_data.(data_request_eff(1:2)).error_bar = gdat_data.error_bar;
- gdat_data.(data_request_eff(1:2)).units = gdat_data.units;
- gdat_data.(data_request_eff(1:2)).core = gdat_data.([data_request_eff(1:2) '_core']);
- gdat_data.(data_request_eff(1:2)).edge = gdat_data.([data_request_eff(1:2) '_edge']);
- gdat_data = rmfield(gdat_data,{[data_request_eff(1:2) '_core'],[data_request_eff(1:2) '_edge']});
- if strcmp(data_request_eff(1:4),'nete')
- params_eff.data_request=data_request_eff(3:4);
- [gdat_data_te,params_kin,error_status]=gdat_d3d(shot,params_eff);
- gdat_data.te.data = gdat_data_te.data;
- gdat_data.te.error_bar = gdat_data_te.error_bar;
- gdat_data.te.units = gdat_data_te.units;
- gdat_data.te.core = gdat_data_te.te_core;
- gdat_data.te.edge = gdat_data_te.te_edge;
- gdat_data.te.error_bar = gdat_data_te.error_bar;
- gdat_data.te.core.psi = gdat_data.ne.core.psi;
- gdat_data.te.core.rhopolnorm = gdat_data.ne.core.rhopolnorm;
- gdat_data.te.core.rhotornorm = gdat_data.ne.core.rhotornorm;
- gdat_data.te.core.rhovolnorm = gdat_data.ne.core.rhovolnorm;
- gdat_data.te.edge.psi = gdat_data.ne.edge.psi;
- gdat_data.te.edge.rhopolnorm = gdat_data.ne.edge.rhopolnorm;
- gdat_data.te.edge.rhotornorm = gdat_data.ne.edge.rhotornorm;
- gdat_data.te.edge.rhovolnorm = gdat_data.ne.edge.rhovolnorm;
- % put pe in main gdat_data
- gdat_data.data = 1.6022e-19.*gdat_data.ne.data.*gdat_data.te.data;
- gdat_data.error_bar = 1.6022e-19 .* (gdat_data.ne.data .* gdat_data.te.error_bar ...
+ % if nete_rho, copy data as .ne, get .te and put pe=e ne Te in data:
+ gdat_data.(data_request_eff(1:2)).data = gdat_data.data;
+ gdat_data.(data_request_eff(1:2)).error_bar = gdat_data.error_bar;
+ gdat_data.(data_request_eff(1:2)).units = gdat_data.units;
+ gdat_data.(data_request_eff(1:2)).core = gdat_data.([data_request_eff(1:2) '_core']);
+ gdat_data.(data_request_eff(1:2)).edge = gdat_data.([data_request_eff(1:2) '_edge']);
+ gdat_data = rmfield(gdat_data,{[data_request_eff(1:2) '_core'],[data_request_eff(1:2) '_edge']});
+ if strcmp(data_request_eff(1:4),'nete')
+ params_eff.data_request=data_request_eff(3:4);
+ [gdat_data_te,params_kin,error_status]=gdat_d3d(shot,params_eff);
+ gdat_data.te.data = gdat_data_te.data;
+ gdat_data.te.error_bar = gdat_data_te.error_bar;
+ gdat_data.te.units = gdat_data_te.units;
+ gdat_data.te.core = gdat_data_te.te_core;
+ gdat_data.te.edge = gdat_data_te.te_edge;
+ gdat_data.te.error_bar = gdat_data_te.error_bar;
+ gdat_data.te.core.psi = gdat_data.ne.core.psi;
+ gdat_data.te.core.rhopolnorm = gdat_data.ne.core.rhopolnorm;
+ gdat_data.te.core.rhotornorm = gdat_data.ne.core.rhotornorm;
+ gdat_data.te.core.rhovolnorm = gdat_data.ne.core.rhovolnorm;
+ gdat_data.te.edge.psi = gdat_data.ne.edge.psi;
+ gdat_data.te.edge.rhopolnorm = gdat_data.ne.edge.rhopolnorm;
+ gdat_data.te.edge.rhotornorm = gdat_data.ne.edge.rhotornorm;
+ gdat_data.te.edge.rhovolnorm = gdat_data.ne.edge.rhovolnorm;
+ % put pe in main gdat_data
+ gdat_data.data = 1.6022e-19.*gdat_data.ne.data.*gdat_data.te.data;
+ gdat_data.error_bar = 1.6022e-19 .* (gdat_data.ne.data .* gdat_data.te.error_bar ...
+ gdat_data.te.data .* gdat_data.ne.error_bar);
- gdat_data.units='N/m^2; 1.6022e-19 ne Te';
- gdat_data.data_fullpath=['pe=1.6e-19*ne*Te in data, .ne, .te ' gdat_data.data_fullpath(3:end)];
- gdat_data.label = 'pe';
- end
-
- % defaults for fits, so user always gets std structure
- gdat_data.fit.rhotornorm = []; % same for both ne and te
- gdat_data.fit.rhopolnorm = [];
- gdat_data.fit.t = [];
- gdat_data.fit.te.data = [];
- gdat_data.fit.te.drhotornorm = [];
- gdat_data.fit.ne.data = [];
- gdat_data.fit.ne.drhotornorm = [];
- gdat_data.fit.raw.te.data = [];
- gdat_data.fit.raw.te.rhotornorm = [];
- gdat_data.fit.raw.ne.data = [];
- gdat_data.fit.raw.ne.rhotornorm = [];
- fit_tension_default = -0.1;
- if isfield(gdat_data.gdat_params,'fit_tension')
- fit_tension = gdat_data.gdat_params.fit_tension;
- else
- fit_tension = fit_tension_default;
- end
- if ~isstruct(fit_tension)
- fit_tension_eff.te = fit_tension;
- fit_tension_eff.ne = fit_tension;
- fit_tension = fit_tension_eff;
- else
- if ~isfield(fit_tension,'te'); fit_tension.te = fit_tension_default; end
- if ~isfield(fit_tension,'ne '); fit_tension.ne = fit_tension_default; end
- end
- gdat_data.gdat_params.fit_tension = fit_tension;
- if isfield(gdat_data.gdat_params,'fit_nb_rho_points')
- fit_nb_rho_points = gdat_data.gdat_params.fit_nb_rho_points;
- else
- fit_nb_rho_points = 201;
- end
- gdat_data.gdat_params.fit_nb_rho_points = fit_nb_rho_points;
- %
- if gdat_data.gdat_params.fit==1
- % add fits
- gdat_data.fit.t = gdat_data.t;
- rhotornormfit = linspace(0,1,fit_nb_rho_points)';
- gdat_data.fit.rhotornorm = rhotornormfit;
- gdat_data.fit.rhopolnorm = NaN*ones(length(rhotornormfit),length(gdat_data.fit.t));
- if any(strfind(data_request_eff,'te'))
- gdat_data.fit.raw.te.data = NaN*ones(size(gdat_data.te.data));
- gdat_data.fit.raw.te.error_bar = NaN*ones(size(gdat_data.te.data));
- gdat_data.fit.raw.te.rhotornorm = NaN*ones(size(gdat_data.te.data));
- gdat_data.fit.te.data = gdat_data.fit.rhopolnorm;
- gdat_data.fit.te.drhotornorm = gdat_data.fit.rhopolnorm;
- end
- if any(strfind(data_request_eff,'ne'))
- gdat_data.fit.raw.ne.data = NaN*ones(size(gdat_data.ne.data));
- gdat_data.fit.raw.ne.error_bar = NaN*ones(size(gdat_data.ne.data));
- gdat_data.fit.raw.ne.rhotornorm = NaN*ones(size(gdat_data.ne.data));
- gdat_data.fit.ne.data =gdat_data.fit.rhopolnorm;
- gdat_data.fit.ne.drhotornorm = gdat_data.fit.rhopolnorm;
- end
- for it=1:length(gdat_data.t)
- % make rhotor->rhopol transformation for each time since equilibrium might have changed
- irhook=find(gdat_data.grids_1d.rhotornorm(:,it)>0 & gdat_data.grids_1d.rhotornorm(:,it)<1); % no need for ~isnan
- [rhoeff isort]=sort(gdat_data.grids_1d.rhotornorm(irhook,it));
- gdat_data.fit.rhopolnorm(:,it)=interpos([0; rhoeff; 1],[0; gdat_data.grids_1d.rhopolnorm(irhook(isort),it); 1],rhotornormfit,-0.1,[2 2],[0 1]);
- if any(strfind(data_request_eff,'te'))
- idatate = find(gdat_data.te.data(:,it)>0 & gdat_data.grids_1d.rhotornorm(:,it)<=1.05);
- if length(idatate)>0
- gdat_data.fit.raw.te.rhotornorm(idatate,it) = gdat_data.grids_1d.rhotornorm(idatate,it);
- gdat_data.fit.raw.te.data(idatate,it) = gdat_data.te.data(idatate,it);
- gdat_data.fit.raw.te.error_bar(idatate,it) = gdat_data.te.error_bar(idatate,it);
- [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhotornorm(idatate,it));
- rhoeff = [0; rhoeff];
- teeff = gdat_data.te.data(idatate(irhoeff),it);
- te_err_eff = gdat_data.te.error_bar(idatate(irhoeff),it);
- % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
- ij=find(teeff./te_err_eff>10.);
- if ~isempty(ij); te_err_eff(ij) = teeff(ij)./0.1; end
- %
- teeff = [teeff(1); teeff];
- te_err_eff = [1e4; te_err_eff];
- [gdat_data.fit.te.data(:,it), gdat_data.fit.te.drhotornorm(:,it)] = interpos(rhoeff,teeff,rhotornormfit,fit_tension.te,[1 0],[0 0],te_err_eff);
- end
- end
- if any(strfind(data_request_eff,'ne'))
- idatane = find(gdat_data.ne.data(:,it)>0 & gdat_data.grids_1d.rhotornorm(:,it)<=1.05);
- if length(idatane)>0
- gdat_data.fit.raw.ne.rhotornorm(idatane,it) = gdat_data.grids_1d.rhotornorm(idatane,it);
- gdat_data.fit.raw.ne.data(idatane,it) = gdat_data.ne.data(idatane,it);
- gdat_data.fit.raw.ne.error_bar(idatane,it) = gdat_data.ne.error_bar(idatane,it);
- [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhotornorm(idatane,it));
- rhoeff = [0; rhoeff];
- % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
- neeff = gdat_data.ne.data(idatane(irhoeff),it);
- ne_err_eff = gdat_data.ne.error_bar(idatane(irhoeff),it);
- ij=find(neeff./ne_err_eff>10.);
- if ~isempty(ij); ne_err_eff(ij) = neeff(ij)./0.1; end
- %
- neeff = [neeff(1); neeff];
- ne_err_eff = [1e21; ne_err_eff];
- [gdat_data.fit.ne.data(:,it), gdat_data.fit.ne.drhotornorm(:,it)] = interpos(rhoeff,neeff,rhotornormfit,fit_tension.ne,[1 0],[0 0],ne_err_eff);
- end
- end
+ gdat_data.units='N/m^2; 1.6022e-19 ne Te';
+ gdat_data.data_fullpath=['pe=1.6e-19*ne*Te in data, .ne, .te ' gdat_data.data_fullpath(3:end)];
+ gdat_data.label = 'pe';
end
- end
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'pgyro'}
- % LOAD MULTI CHANNEL DATA ECS
- % powers, frequencies, etc
- params_eff = gdat_data.gdat_params;
- params_eff.data_request={'rf' '\echpwrc'};
-% $$$ gyro_names={'leia','luke','scarecrow','tinman','chewbacca','nasa'};
-% $$$ power_names={'ecleifpwrc','eclukfpwrc','ecscafpwrc','ectinfpwrc','ecchefpwrc','ecnasfpwrc'};
- gyro_names={'leia','luke','r2d2','yoda','han'};
- power_names={'ecleifpwrc','eclukfpwrc','ecr2dfpwrc','ecyodfpwrc','echanfpwrc'};
- % pgyro tot in index=length(gyro_names)+1
- try
- gdat_data=gdat_d3d(shot,params_eff);
- gdat_data.data_request = data_request_eff;
- gdat_data.gdat_params.data_request = data_request_eff;
- catch
- if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
- gdat_data.data_request = data_request_eff;
- return
- end
- nb_timepoints = length(gdat_data.t);
- pgyro = NaN*ones(nb_timepoints,length(gyro_names)+1);
- pgyro(:,length(gyro_names)+1) = reshape(gdat_data.data,nb_timepoints,1);
- gdat_data.data = pgyro;
- labels{length(gyro_names)+1} = 'ECtot';
- for i=1:length(gyro_names)
- % "old" ECRH1 gyrotrons: gyro 1 to 4 in pgyro
- params_eff.data_request={'rf',['ech.' gyro_names{i} ':' power_names{i}]};
- gdat_data_i=gdat_d3d(shot,params_eff);
- if isempty(gdat_data_i.data) || isempty(gdat_data_i.dim)
+ % defaults for fits, so user always gets std structure
+ gdat_data.fit.rhotornorm = []; % same for both ne and te
+ gdat_data.fit.rhopolnorm = [];
+ gdat_data.fit.t = [];
+ gdat_data.fit.te.data = [];
+ gdat_data.fit.te.drhotornorm = [];
+ gdat_data.fit.ne.data = [];
+ gdat_data.fit.ne.drhotornorm = [];
+ gdat_data.fit.raw.te.data = [];
+ gdat_data.fit.raw.te.rhotornorm = [];
+ gdat_data.fit.raw.ne.data = [];
+ gdat_data.fit.raw.ne.rhotornorm = [];
+ fit_tension_default = -0.1;
+ if isfield(gdat_data.gdat_params,'fit_tension')
+ fit_tension = gdat_data.gdat_params.fit_tension;
else
- gdat_data.ec{i} = gdat_data_i;
- gdat_data.data(:,i) = reshape(gdat_data_i.data,nb_timepoints,1);
- gdat_data.dim = [{gdat_data_i.t} {[1:length(gyro_names)+1]}];
- if max(gdat_data_i.data) > 0.
- % labels{i} = [gyro_names{i} ':' power_names{i}];
- labels{i} = [gyro_names{i}];
- end
- end
- try
- params_eff.data_request={'rf',['ech.' gyro_names{i} ':ec' gyro_names{i}(1:3) 'polang']};
- a=gdat_d3d(shot,params_eff);
- catch
- % polang not present
- a=[];
+ fit_tension = fit_tension_default;
end
- if isempty(a)
+ if ~isstruct(fit_tension)
+ fit_tension_eff.te = fit_tension;
+ fit_tension_eff.ne = fit_tension;
+ fit_tension = fit_tension_eff;
else
- gdat_data.ec{i}.polang_t = a.t;
- gdat_data.ec{i}.polang = a.data;
- gdat_data.polang_ec{i} = a;
+ if ~isfield(fit_tension,'te'); fit_tension.te = fit_tension_default; end
+ if ~isfield(fit_tension,'ne '); fit_tension.ne = fit_tension_default; end
end
- try
- params_eff.data_request={'rf',['ech.' gyro_names{i} ':ec' gyro_names{i}(1:3) 'polcnt']};
- a=gdat_d3d(shot,params_eff);
- catch
- a=[];
- end
- if isempty(a)
+ gdat_data.gdat_params.fit_tension = fit_tension;
+ if isfield(gdat_data.gdat_params,'fit_nb_rho_points')
+ fit_nb_rho_points = gdat_data.gdat_params.fit_nb_rho_points;
else
- gdat_data.ec{i}.polcnt = a.data;
- gdat_data.polcnt_ec{i} = a;
+ fit_nb_rho_points = 201;
+ end
+ gdat_data.gdat_params.fit_nb_rho_points = fit_nb_rho_points;
+ %
+ if gdat_data.gdat_params.fit==1
+ % add fits
+ gdat_data.fit.t = gdat_data.t;
+ rhotornormfit = linspace(0,1,fit_nb_rho_points)';
+ gdat_data.fit.rhotornorm = rhotornormfit;
+ gdat_data.fit.rhopolnorm = NaN*ones(length(rhotornormfit),length(gdat_data.fit.t));
+ if any(strfind(data_request_eff,'te'))
+ gdat_data.fit.raw.te.data = NaN*ones(size(gdat_data.te.data));
+ gdat_data.fit.raw.te.error_bar = NaN*ones(size(gdat_data.te.data));
+ gdat_data.fit.raw.te.rhotornorm = NaN*ones(size(gdat_data.te.data));
+ gdat_data.fit.te.data = gdat_data.fit.rhopolnorm;
+ gdat_data.fit.te.drhotornorm = gdat_data.fit.rhopolnorm;
+ end
+ if any(strfind(data_request_eff,'ne'))
+ gdat_data.fit.raw.ne.data = NaN*ones(size(gdat_data.ne.data));
+ gdat_data.fit.raw.ne.error_bar = NaN*ones(size(gdat_data.ne.data));
+ gdat_data.fit.raw.ne.rhotornorm = NaN*ones(size(gdat_data.ne.data));
+ gdat_data.fit.ne.data =gdat_data.fit.rhopolnorm;
+ gdat_data.fit.ne.drhotornorm = gdat_data.fit.rhopolnorm;
+ end
+ for it=1:length(gdat_data.t)
+ % make rhotor->rhopol transformation for each time since equilibrium might have changed
+ irhook=find(gdat_data.grids_1d.rhotornorm(:,it)>0 & gdat_data.grids_1d.rhotornorm(:,it)<1); % no need for ~isnan
+ [rhoeff isort]=sort(gdat_data.grids_1d.rhotornorm(irhook,it));
+ gdat_data.fit.rhopolnorm(:,it)=interpos([0; rhoeff; 1],[0; gdat_data.grids_1d.rhopolnorm(irhook(isort),it); 1],rhotornormfit,-0.1,[2 2],[0 1]);
+ if any(strfind(data_request_eff,'te'))
+ idatate = find(gdat_data.te.data(:,it)>0 & gdat_data.grids_1d.rhotornorm(:,it)<=1.05);
+ if length(idatate)>0
+ gdat_data.fit.raw.te.rhotornorm(idatate,it) = gdat_data.grids_1d.rhotornorm(idatate,it);
+ gdat_data.fit.raw.te.data(idatate,it) = gdat_data.te.data(idatate,it);
+ gdat_data.fit.raw.te.error_bar(idatate,it) = gdat_data.te.error_bar(idatate,it);
+ [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhotornorm(idatate,it));
+ rhoeff = [0; rhoeff];
+ teeff = gdat_data.te.data(idatate(irhoeff),it);
+ te_err_eff = gdat_data.te.error_bar(idatate(irhoeff),it);
+ % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
+ ij=find(teeff./te_err_eff>10.);
+ if ~isempty(ij); te_err_eff(ij) = teeff(ij)./0.1; end
+ %
+ teeff = [teeff(1); teeff];
+ te_err_eff = [1e4; te_err_eff];
+ [gdat_data.fit.te.data(:,it), gdat_data.fit.te.drhotornorm(:,it)] = interpos(rhoeff,teeff,rhotornormfit,fit_tension.te,[1 0],[0 0],te_err_eff);
+ end
+ end
+ if any(strfind(data_request_eff,'ne'))
+ idatane = find(gdat_data.ne.data(:,it)>0 & gdat_data.grids_1d.rhotornorm(:,it)<=1.05);
+ if length(idatane)>0
+ gdat_data.fit.raw.ne.rhotornorm(idatane,it) = gdat_data.grids_1d.rhotornorm(idatane,it);
+ gdat_data.fit.raw.ne.data(idatane,it) = gdat_data.ne.data(idatane,it);
+ gdat_data.fit.raw.ne.error_bar(idatane,it) = gdat_data.ne.error_bar(idatane,it);
+ [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhotornorm(idatane,it));
+ rhoeff = [0; rhoeff];
+ % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
+ neeff = gdat_data.ne.data(idatane(irhoeff),it);
+ ne_err_eff = gdat_data.ne.error_bar(idatane(irhoeff),it);
+ ij=find(neeff./ne_err_eff>10.);
+ if ~isempty(ij); ne_err_eff(ij) = neeff(ij)./0.1; end
+ %
+ neeff = [neeff(1); neeff];
+ ne_err_eff = [1e21; ne_err_eff];
+ [gdat_data.fit.ne.data(:,it), gdat_data.fit.ne.drhotornorm(:,it)] = interpos(rhoeff,neeff,rhotornormfit,fit_tension.ne,[1 0],[0 0],ne_err_eff);
+ end
+ end
+ end
end
+
+
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'pgyro'}
+ % LOAD MULTI CHANNEL DATA ECS
+ % powers, frequencies, etc
+ params_eff = gdat_data.gdat_params;
+ params_eff.data_request={'rf' '\echpwrc'};
+% $$$ gyro_names={'leia','luke','scarecrow','tinman','chewbacca','nasa'};
+% $$$ power_names={'ecleifpwrc','eclukfpwrc','ecscafpwrc','ectinfpwrc','ecchefpwrc','ecnasfpwrc'};
+ gyro_names={'leia','luke','r2d2','yoda','han'};
+ power_names={'ecleifpwrc','eclukfpwrc','ecr2dfpwrc','ecyodfpwrc','echanfpwrc'};
+ % pgyro tot in index=length(gyro_names)+1
try
- params_eff.data_request={'rf',['ech.' gyro_names{i} ':ec' gyro_names{i}(1:3) 'torcnt']};
- a=gdat_d3d(shot,params_eff);
+ gdat_data=gdat_d3d(shot,params_eff);
+ gdat_data.data_request = data_request_eff;
+ gdat_data.gdat_params.data_request = data_request_eff;
catch
- a=[];
+ if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
+ gdat_data.data_request = data_request_eff;
+ return
end
- if isempty(a)
+ nb_timepoints = length(gdat_data.t);
+ pgyro = NaN*ones(nb_timepoints,length(gyro_names)+1);
+ pgyro(:,length(gyro_names)+1) = reshape(gdat_data.data,nb_timepoints,1);
+ gdat_data.data = pgyro;
+ labels{length(gyro_names)+1} = 'ECtot';
+ for i=1:length(gyro_names)
+ % "old" ECRH1 gyrotrons: gyro 1 to 4 in pgyro
+ params_eff.data_request={'rf',['ech.' gyro_names{i} ':' power_names{i}]};
+ gdat_data_i=gdat_d3d(shot,params_eff);
+ if isempty(gdat_data_i.data) || isempty(gdat_data_i.dim)
+ else
+ gdat_data.ec{i} = gdat_data_i;
+ gdat_data.data(:,i) = reshape(gdat_data_i.data,nb_timepoints,1);
+ gdat_data.dim = [{gdat_data_i.t} {[1:length(gyro_names)+1]}];
+ if max(gdat_data_i.data) > 0.
+ % labels{i} = [gyro_names{i} ':' power_names{i}];
+ labels{i} = [gyro_names{i}];
+ end
+ end
+ try
+ params_eff.data_request={'rf',['ech.' gyro_names{i} ':ec' gyro_names{i}(1:3) 'polang']};
+ a=gdat_d3d(shot,params_eff);
+ catch
+ % polang not present
+ a=[];
+ end
+ if isempty(a)
+ else
+ gdat_data.ec{i}.polang_t = a.t;
+ gdat_data.ec{i}.polang = a.data;
+ gdat_data.polang_ec{i} = a;
+ end
+ try
+ params_eff.data_request={'rf',['ech.' gyro_names{i} ':ec' gyro_names{i}(1:3) 'polcnt']};
+ a=gdat_d3d(shot,params_eff);
+ catch
+ a=[];
+ end
+ if isempty(a)
+ else
+ gdat_data.ec{i}.polcnt = a.data;
+ gdat_data.polcnt_ec{i} = a;
+ end
+ try
+ params_eff.data_request={'rf',['ech.' gyro_names{i} ':ec' gyro_names{i}(1:3) 'torcnt']};
+ a=gdat_d3d(shot,params_eff);
+ catch
+ a=[];
+ end
+ if isempty(a)
+ else
+ gdat_data.ec{i}.torcnt = a.data;
+ gdat_data.torcnt_ec{i} = a;
+ end
+ end
+ gdat_data.gyro_names = gyro_names;
+ gdat_data.power_names = power_names;
+ % add ech on time_interval from total power>3% of max;
+ ij=find(gdat_data.data(:,end)>0.03.*max(gdat_data.data(:,end)));
+ if ~isempty(ij)
+ gdat_data.ec_t_on = [gdat_data.t(ij(1)) gdat_data.t(ij(end))];
else
- gdat_data.ec{i}.torcnt = a.data;
- gdat_data.torcnt_ec{i} = a;
+ gdat_data.ec_t_on = [0 0];
end
- end
- gdat_data.gyro_names = gyro_names;
- gdat_data.power_names = power_names;
- % add ech on time_interval from total power>3% of max;
- ij=find(gdat_data.data(:,end)>0.03.*max(gdat_data.data(:,end)));
- if ~isempty(ij)
- gdat_data.ec_t_on = [gdat_data.t(ij(1)) gdat_data.t(ij(end))];
- else
- gdat_data.ec_t_on = [0 0];
- end
- if ~isempty(gdat_data.dim)
- gdat_data.t = gdat_data.dim{1};
- gdat_data.x = gdat_data.dim{2};
- gdat_data.dimunits=[{'time [ms]'} gyro_names{:} {'ECtot'}];
- gdat_data.units='W';
- gdat_data.data_fullpath=['rf::ech.gyro_names:ec..pwrc'];
- icount=0;
- for i=1:length(labels)
- if ~isempty(labels{i})
- icount=icount+1;
- if icount==1 & ~iscell(gdat_data.label)
- gdat_data = rmfield(gdat_data,'label');
+ if ~isempty(gdat_data.dim)
+ gdat_data.t = gdat_data.dim{1};
+ gdat_data.x = gdat_data.dim{2};
+ gdat_data.dimunits=[{'time [ms]'} gyro_names{:} {'ECtot'}];
+ gdat_data.units='W';
+ gdat_data.data_fullpath=['rf::ech.gyro_names:ec..pwrc'];
+ icount=0;
+ for i=1:length(labels)
+ if ~isempty(labels{i})
+ icount=icount+1;
+ if icount==1 & ~iscell(gdat_data.label)
+ gdat_data = rmfield(gdat_data,'label');
+ end
+ gdat_data.label{icount} = labels{i};
end
- gdat_data.label{icount} = labels{i};
- end
+ end
+ else
+ gdat_data.freq_ech_units =[]';
+ gdat_data.ec = [];
+ gdat_data.polpos_ec = [];
+ gdat_data.torpos_ec = [];
end
- else
- gdat_data.freq_ech_units =[]';
- gdat_data.ec = [];
- gdat_data.polpos_ec = [];
- gdat_data.torpos_ec = [];
- end
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'powers'}
- sources_avail = {'ohm','ec','nbi','ic'}; % note should allow ech, nbh, ohmic in parameter sources
- sources_avail = {'ohm','ec','nbi'}; % note should allow ech, nbh, ohmic in parameter sources
- for i=1:length(sources_avail)
- gdat_data.(sources_avail{i}).data = [];
- gdat_data.(sources_avail{i}).units = [];
- gdat_data.(sources_avail{i}).dim=[];
- gdat_data.(sources_avail{i}).dimunits=[];
- gdat_data.(sources_avail{i}).t=[];
- gdat_data.(sources_avail{i}).x=[];
- gdat_data.(sources_avail{i}).data_fullpath=[];
- gdat_data.(sources_avail{i}).label=[];
- end
- if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = sources_avail;
- elseif ~iscell(gdat_data.gdat_params.source)
- if ischar(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
- if ~any(strmatch(gdat_data.gdat_params.source,lower(sources_avail)))
- if (gdat_params.nverbose>=1)
- warning(['source= ' gdat_data.gdat_params.source ' is not part of the available sources: ' sprintf('''%s'' ',sources_avail{:})]);
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'powers'}
+ sources_avail = {'ohm','ec','nbi','ic'}; % note should allow ech, nbh, ohmic in parameter sources
+ sources_avail = {'ohm','ec','nbi'}; % note should allow ech, nbh, ohmic in parameter sources
+ for i=1:length(sources_avail)
+ gdat_data.(sources_avail{i}).data = [];
+ gdat_data.(sources_avail{i}).units = [];
+ gdat_data.(sources_avail{i}).dim=[];
+ gdat_data.(sources_avail{i}).dimunits=[];
+ gdat_data.(sources_avail{i}).t=[];
+ gdat_data.(sources_avail{i}).x=[];
+ gdat_data.(sources_avail{i}).data_fullpath=[];
+ gdat_data.(sources_avail{i}).label=[];
+ end
+ if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
+ gdat_data.gdat_params.source = sources_avail;
+ elseif ~iscell(gdat_data.gdat_params.source)
+ if ischar(gdat_data.gdat_params.source)
+ gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
+ if ~any(strmatch(gdat_data.gdat_params.source,lower(sources_avail)))
+ if (gdat_params.nverbose>=1)
+ warning(['source= ' gdat_data.gdat_params.source ' is not part of the available sources: ' sprintf('''%s'' ',sources_avail{:})]);
+ end
+ return
+ else
+ gdat_data.gdat_params.source = {gdat_data.gdat_params.source};
end
- return
else
- gdat_data.gdat_params.source = {gdat_data.gdat_params.source};
+ if (gdat_params.nverbose>=1); warning([' source parameter not compatible with: ' sprintf('''%s'' ',sources_avail{:})]); end
+ return
end
else
- if (gdat_params.nverbose>=1); warning([' source parameter not compatible with: ' sprintf('''%s'' ',sources_avail{:})]); end
- return
- end
- else
- for i=1:length(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source{i} = lower(gdat_data.gdat_params.source{i});
- if ~any(strmatch(gdat_data.gdat_params.source{i},lower(sources_avail)))
- if gdat_data.gdat_params.nverbose>=1
- warning(['source = ' gdat_data.gdat_params.source{i} ' not expected with data_request= ' data_request_eff])
+ for i=1:length(gdat_data.gdat_params.source)
+ gdat_data.gdat_params.source{i} = lower(gdat_data.gdat_params.source{i});
+ if ~any(strmatch(gdat_data.gdat_params.source{i},lower(sources_avail)))
+ if gdat_data.gdat_params.nverbose>=1
+ warning(['source = ' gdat_data.gdat_params.source{i} ' not expected with data_request= ' data_request_eff])
+ end
end
end
end
- end
- % always start from ohmic so can use this time as base time since should yield full shot
+ % always start from ohmic so can use this time as base time since should yield full shot
- fields_to_copy = {'data','units','dim','dimunits','t','x','data_fullpath','label','help','gdat_params'};
- fields_to_not_copy = {'shot','gdat_request'};
- % total of each source in .data, but full data in subfield like pgyro in .ec, to check for nbi
- params_eff = gdat_data.gdat_params;
- % ohmic, use its time-base
- params_eff.data_request={'EFIT01','\vloopmhd'}; %poh too noisy even if vloop*ip is not quite correct
- try
- ohm=gdat_d3d(shot,params_eff);
- catch
- ohm.data = [];
- ohm.dim = [];
- end
- if ~isempty(ohm.data) && ~isempty(ohm.dim)
- ip=gdat_d3d(shot,'ip');
- ip_ohm=interp1(ip.t,ip.data,ohm.t);
- ohm.data = ohm.data .* ip_ohm;
- for i=1:length(fields_to_copy)
- if isfield(ohm,fields_to_copy{i})
- gdat_data.ohm.(fields_to_copy{i}) = ohm.(fields_to_copy{i});
- end
- end
- gdat_data.ohm.raw_data = gdat_data.ohm.data;
- else
- if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
- return
- end
- mapping_for_d3d.timedim = 1; mapping_for_d3d.gdat_timedim = 1;
- taus = -10;
- %
- % add each source in main.data, on ohm time array
- gdat_data.t = gdat_data.ohm.t;
- gdat_data.dim{1} = gdat_data.t;
- gdat_data.dimunits{1} = 's';
- gdat_data.ohm.data = interpos(gdat_data.t,gdat_data.ohm.raw_data,5.*taus);
- gdat_data.data = reshape(gdat_data.ohm.data,length(gdat_data.t),1);
- gdat_data.ohm.tension = 5.*taus;
- gdat_data.x =[1];
- gdat_data.label={'P_{ohm}'};
- gdat_data.units = 'W';
- %
- if any(strmatch('ec',gdat_data.gdat_params.source))
- % ec
- params_eff.data_request='pgyro';
+ fields_to_copy = {'data','units','dim','dimunits','t','x','data_fullpath','label','help','gdat_params'};
+ fields_to_not_copy = {'shot','gdat_request'};
+ % total of each source in .data, but full data in subfield like pgyro in .ec, to check for nbi
+ params_eff = gdat_data.gdat_params;
+ % ohmic, use its time-base
+ params_eff.data_request={'EFIT01','\vloopmhd'}; %poh too noisy even if vloop*ip is not quite correct
try
- ec=gdat_d3d(shot,params_eff);
+ ohm=gdat_d3d(shot,params_eff);
catch
+ ohm.data = [];
+ ohm.dim = [];
end
- if ~isempty(ec.data) && ~isempty(ec.dim)
- for i=1:length(fields_to_copy)
- % if has pgyro, use not_copy
- if isfield(ec,fields_to_copy{i}) && ~any(strmatch(fields_to_not_copy,fields_to_copy{i}))
- gdat_data.ec.(fields_to_copy{i}) = ec.(fields_to_copy{i});
- end
- end
- gdat_data.data(:,end+1) = interpos(-21,gdat_data.ec.t,gdat_data.ec.data(:,end),gdat_data.t);
- gdat_data.x(end+1) =gdat_data.x(end)+1;
- gdat_data.label{end+1}='P_{ec}';
- end
- end
- %
- if any(strmatch('nb',gdat_data.gdat_params.source))
- % nbi
- params_eff.data_request='nbi';
- try
- nbi=gdat_d3d(shot,params_eff);
- catch
- end
- if ~isempty(nbi.data) && ~isempty(nbi.dim)
- for i=1:length(fields_to_copy)
- if isfield(nbi,fields_to_copy{i})
- gdat_data.nbi.(fields_to_copy{i}) = nbi.(fields_to_copy{i});
- end
- end
- % add to main with linear interpolation and 0 for extrapolated values
- gdat_data.data(:,end+1) = interpos(-21,gdat_data.nbi.t,gdat_data.nbi.data(:,end),gdat_data.t);
- gdat_data.x(end+1) =gdat_data.x(end)+1;
- gdat_data.label{end+1}='P_{nbi}';
+ if ~isempty(ohm.data) && ~isempty(ohm.dim)
+ ip=gdat_d3d(shot,'ip');
+ ip_ohm=interp1(ip.t,ip.data,ohm.t);
+ ohm.data = ohm.data .* ip_ohm;
+ for i=1:length(fields_to_copy)
+ if isfield(ohm,fields_to_copy{i})
+ gdat_data.ohm.(fields_to_copy{i}) = ohm.(fields_to_copy{i});
+ end
+ end
+ gdat_data.ohm.raw_data = gdat_data.ohm.data;
+ else
+ if gdat_params.nverbose>=3; disp(['problems with ' params_eff.data_request]); end
+ return
end
- end
- %
- if any(strmatch('ic',gdat_data.gdat_params.source))
- % ic
- params_eff.data_request={'ICP','PICRN'};
- try
- ic=gdat_d3d(shot,params_eff);
- catch
+ mapping_for_d3d.timedim = 1; mapping_for_d3d.gdat_timedim = 1;
+ taus = -10;
+ %
+ % add each source in main.data, on ohm time array
+ gdat_data.t = gdat_data.ohm.t;
+ gdat_data.dim{1} = gdat_data.t;
+ gdat_data.dimunits{1} = 's';
+ gdat_data.ohm.data = interpos(gdat_data.t,gdat_data.ohm.raw_data,5.*taus);
+ gdat_data.data = reshape(gdat_data.ohm.data,length(gdat_data.t),1);
+ gdat_data.ohm.tension = 5.*taus;
+ gdat_data.x =[1];
+ gdat_data.label={'P_{ohm}'};
+ gdat_data.units = 'W';
+ %
+ if any(strmatch('ec',gdat_data.gdat_params.source))
+ % ec
+ params_eff.data_request='pgyro';
+ try
+ ec=gdat_d3d(shot,params_eff);
+ catch
+ end
+ if ~isempty(ec.data) && ~isempty(ec.dim)
+ for i=1:length(fields_to_copy)
+ % if has pgyro, use not_copy
+ if isfield(ec,fields_to_copy{i}) && ~any(strmatch(fields_to_not_copy,fields_to_copy{i}))
+ gdat_data.ec.(fields_to_copy{i}) = ec.(fields_to_copy{i});
+ end
+ end
+ gdat_data.data(:,end+1) = interpos(-21,gdat_data.ec.t,gdat_data.ec.data(:,end),gdat_data.t);
+ gdat_data.x(end+1) =gdat_data.x(end)+1;
+ gdat_data.label{end+1}='P_{ec}';
+ end
end
- if ~isempty(ic.data) && ~isempty(ic.dim)
- for i=1:length(fields_to_copy)
- if isfield(ic,fields_to_copy{i})
- gdat_data.ic.(fields_to_copy{i}) = ic.(fields_to_copy{i});
- end
- end
- gdat_data.data(:,end+1) = interpos(-21,gdat_data.ic.t,gdat_data.ic.data,gdat_data.t);
- gdat_data.x(end+1) =gdat_data.x(end)+1;
- gdat_data.label{end+1}='P_{ic}';
+ %
+ if any(strmatch('nb',gdat_data.gdat_params.source))
+ % nbi
+ params_eff.data_request='nbi';
+ try
+ nbi=gdat_d3d(shot,params_eff);
+ catch
+ end
+ if ~isempty(nbi.data) && ~isempty(nbi.dim)
+ for i=1:length(fields_to_copy)
+ if isfield(nbi,fields_to_copy{i})
+ gdat_data.nbi.(fields_to_copy{i}) = nbi.(fields_to_copy{i});
+ end
+ end
+ % add to main with linear interpolation and 0 for extrapolated values
+ gdat_data.data(:,end+1) = interpos(-21,gdat_data.nbi.t,gdat_data.nbi.data(:,end),gdat_data.t);
+ gdat_data.x(end+1) =gdat_data.x(end)+1;
+ gdat_data.label{end+1}='P_{nbi}';
+ end
end
- end
- % add tot power
- gdat_data.data(:,end+1) = sum(gdat_data.data,2);
- gdat_data.label{end+1}='P_{tot}';
- gdat_data.x(end+1) =gdat_data.x(end)+1;
- gdat_data.dim{2} = gdat_data.x; gdat_data.dimunits{2} = '';
- gdat_data.data_fullpath = 'tot powers from each sources, and total power in .data(:,end)';
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'q_rho'}
- [gdat_data,exp_name_eff,DIAG,NTIME_Lpf,NTIME,Lpf1_t,Lpf_SOL] = get_EQ_params(gdat_data);
- % since Lpf depends on time, need to load all first and then loop over time for easier mapping
- [qpsi,e]=rdaD3D_eff(shot,DIAG,'Qpsi',exp_name_eff);
- ndimrho = size(qpsi.data,2);
- if ndimrho==NTIME_Lpf
- % data seems to be transposed
- ndimrho = size(qpsi.data,1);
- itotransposeback = 1; % seems x,time inverted so transpose and exchange .x and .t
- else
- itotransposeback = 0;
- end
- qpsi=adapt_rda(qpsi,NTIME,ndimrho,itotransposeback);
- ijnan=find(isnan(qpsi.value));
- qpsi.value(ijnan)=0;
- [psi_tree,e]=rdaD3D_eff(shot,DIAG,'PFL',exp_name_eff);
- psi_tree=adapt_rda(psi_tree,NTIME,ndimrho,itotransposeback);
- [phi_tree,e]=rdaD3D_eff(shot,DIAG,'TFLx',exp_name_eff);
- phi_tree=adapt_rda(phi_tree,NTIME,ndimrho,itotransposeback);
- [Vol,e]=rdaD3D_eff(shot,DIAG,'Vol',exp_name_eff);
- Vol=adapt_rda(Vol,NTIME,2*ndimrho,itotransposeback);
- % seems "LCFS" q-value is far too large, limit to some max (when diverted)
- max_qValue = 30.; % Note could just put a NaN on LCFS value since ill-defined when diverted
- for it=1:NTIME
- Lpf1 = Lpf1_t(it);
- % Qpsi and similar data is on (time,radius) with radius being: LCFS..Lpf_points dummy LCFS..SOL part
- % change it to (radial,time) and use only Lpf+1 points up to LCFS
- ijok=find(qpsi.value(:,1)); % note: eqr fills in only odd points radially
- % set NaNs to zeroes
- if qpsi.value(ijok(1),1)<0
- gdat_data.qvalue(:,it) = max(qpsi.value(it,Lpf1:-1:1)',-max_qValue);
- else
- gdat_data.qvalue(:,it) = min(qpsi.value(it,Lpf1:-1:1)',max_qValue);
- end
- % get x values
- psi_it=psi_tree.value(it,Lpf1:-1:1)';
- gdat_data.psi_axis(it)= psi_it(1);
- gdat_data.psi_lcfs(it)= psi_it(end);
- gdat_data.rhopolnorm(:,it) = sqrt(abs((psi_it-gdat_data.psi_axis(it)) ./(gdat_data.psi_lcfs(it)-gdat_data.psi_axis(it))));
- if strcmp(DIAG,'EQR');
- % q value has only a few values and from center to edge, assume they are from central rhopol values on
- % But they are every other point starting from 3rd
- ijk=find(gdat_data.qvalue(:,it)~=0);
- if length(ijk)>2
- % now shots have non-zero axis values in eqr
- rhoeff=gdat_data.rhopolnorm(ijk,it);
- qeff=gdat_data.qvalue(ijk,it); % radial order was already inverted above
- if ijk(1)>1
- rhoeff = [0.; rhoeff];
- qeff = [qeff(1) ;qeff];
- end
- ij_nonan=find(~isnan(gdat_data.rhopolnorm(:,it)));
- qfit = zeros(size(gdat_data.rhopolnorm(:,it)));
- qfit(ij_nonan)=interpos(rhoeff,qeff,gdat_data.rhopolnorm(ij_nonan,it),-0.01,[1 0],[0 0],[300; ones(size(qeff(1:end-1)))]);
- else
- qfit = zeros(size(gdat_data.rhopolnorm(:,it)));
- end
- gdat_data.qvalue(:,it) = qfit;
- end
- % get rhotor values
- phi_it = phi_tree.value(it,Lpf1:-1:1)';
- gdat_data.rhotornorm(:,it) = sqrt(abs(phi_it ./ phi_it(end)));
- % get rhovol values
- vol_it=Vol.value(it,2*Lpf1-1:-2:1)';
- gdat_data.rhovolnorm(:,it) = sqrt(abs(vol_it ./ vol_it(end)));
- % Qpsi and similar data is on (time,radius) with radius being: LCFS..Lpf_points dummy LCFS..SOL part
- % change it to (radial,time) and use only Lpf+1 points up to LCFS
- ijok=find(qpsi.value(:,1)); % note: eqr fills in only odd points radially
- % max value 1e6, change to 2*extrapolation (was max_qValue before)
- q_edge=interpos(gdat_data.rhotornorm(1:end-1,it),qpsi.value(it,Lpf1:-1:2),1,-0.1);
- gdat_data.qvalue(:,it) = qpsi.value(it,Lpf1:-1:1)';
- if abs(gdat_data.qvalue(end,it)) > 1e3
- % assume diverted
- gdat_data.qvalue(end,it) = 2. * q_edge;
+ %
+ if any(strmatch('ic',gdat_data.gdat_params.source))
+ % ic
+ params_eff.data_request={'ICP','PICRN'};
+ try
+ ic=gdat_d3d(shot,params_eff);
+ catch
+ end
+ if ~isempty(ic.data) && ~isempty(ic.dim)
+ for i=1:length(fields_to_copy)
+ if isfield(ic,fields_to_copy{i})
+ gdat_data.ic.(fields_to_copy{i}) = ic.(fields_to_copy{i});
+ end
+ end
+ gdat_data.data(:,end+1) = interpos(-21,gdat_data.ic.t,gdat_data.ic.data,gdat_data.t);
+ gdat_data.x(end+1) =gdat_data.x(end)+1;
+ gdat_data.label{end+1}='P_{ic}';
+ end
end
-% $$$ if qpsi.value(ijok(1),1)<0
-% $$$ gdat_data.qvalue(:,it) = max(qpsi.value(it,Lpf1:-1:1)',-max_qValue);
-% $$$ else
-% $$$ gdat_data.qvalue(:,it) = min(qpsi.value(it,Lpf1:-1:1)',max_qValue);
-% $$$ end
- end
- gdat_data.x = gdat_data.rhopolnorm;
- % get time values
- gdat_data.data = gdat_data.qvalue; % put q in data
- gdat_data.units=[]; % not applicable
- gdat_data.data_fullpath = [DIAG ' from expname: ' gdat_data.gdat_params.exp_name '; q(rhopolnorm,t) in .data(.x,.t)'];
- gdat_data.cocos = 17; % should check FPP
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits{1} = 'rhopolnorm';
- gdat_data.dimunits{2} = 'time [s]';
+ % add tot power
+ gdat_data.data(:,end+1) = sum(gdat_data.data,2);
+ gdat_data.label{end+1}='P_{tot}';
+ gdat_data.x(end+1) =gdat_data.x(end)+1;
+ gdat_data.dim{2} = gdat_data.x; gdat_data.dimunits{2} = '';
+ gdat_data.data_fullpath = 'tot powers from each sources, and total power in .data(:,end)';
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'psi_axis', 'psi_edge'}
- if strcmp(upper(gdat_data.gdat_params.equil),'FPG')
- gdat_params_prev = gdat_data.gdat_params; gdat_params_eff = gdat_params_prev;
- gdat_params_eff.data_request = [{'FPG'},{'fax-bnd'},{'D3DD'}];
- gdat_data = gdat_d3d(gdat_data.shot,gdat_params_eff);
- gdat_data.gdat_params = gdat_params_prev;
- gdat_data.label = 'psi\_axis-psi\_edge';
- gdat_data.data_fullpath = [gdat_data.data_fullpath ' yields only psi\_axis-psi\_edge from FPG/fax-bnd'];
- else
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'q_rho'}
[gdat_data,exp_name_eff,DIAG,NTIME_Lpf,NTIME,Lpf1_t,Lpf_SOL] = get_EQ_params(gdat_data);
% since Lpf depends on time, need to load all first and then loop over time for easier mapping
- [psi_tree,e]=rdaD3D_eff(shot,DIAG,'PFL',exp_name_eff);
- ndimrho = size(psi_tree.data,2);
+ [qpsi,e]=rdaD3D_eff(shot,DIAG,'Qpsi',exp_name_eff);
+ ndimrho = size(qpsi.data,2);
if ndimrho==NTIME_Lpf
- % data seems to be transposed
- ndimrho = size(psi_tree.data,1);
- itotransposeback = 1; % seems x,time inverted so transpose and exchange .x and .t
+ % data seems to be transposed
+ ndimrho = size(qpsi.data,1);
+ itotransposeback = 1; % seems x,time inverted so transpose and exchange .x and .t
else
- itotransposeback = 0;
+ itotransposeback = 0;
end
+ qpsi=adapt_rda(qpsi,NTIME,ndimrho,itotransposeback);
+ ijnan=find(isnan(qpsi.value));
+ qpsi.value(ijnan)=0;
+ [psi_tree,e]=rdaD3D_eff(shot,DIAG,'PFL',exp_name_eff);
psi_tree=adapt_rda(psi_tree,NTIME,ndimrho,itotransposeback);
- ijnan=find(isnan(psi_tree.value));
- psi_tree.value(ijnan)=0;
- gdat_data.dim{1} = gdat_data.t;
- gdat_data.dimunits{1} = 'time [s]';
+ [phi_tree,e]=rdaD3D_eff(shot,DIAG,'TFLx',exp_name_eff);
+ phi_tree=adapt_rda(phi_tree,NTIME,ndimrho,itotransposeback);
+ [Vol,e]=rdaD3D_eff(shot,DIAG,'Vol',exp_name_eff);
+ Vol=adapt_rda(Vol,NTIME,2*ndimrho,itotransposeback);
+ % seems "LCFS" q-value is far too large, limit to some max (when diverted)
+ max_qValue = 30.; % Note could just put a NaN on LCFS value since ill-defined when diverted
for it=1:NTIME
- Lpf1 = Lpf1_t(it);
- psi_it=psi_tree.value(it,Lpf1:-1:1)';
- if strcmp(data_request_eff,'psi_axis')
- gdat_data.data(it)= psi_it(1);
- elseif strcmp(data_request_eff,'psi_edge')
- gdat_data.data(it)= psi_it(end);
- else
- end
- end
- gdat_data.units = psi_tree.units;
- gdat_data.data_fullpath = [DIAG '/PFL extract ' data_request_eff];
- end
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'rot', 'cerqrot'}
- nth_points = 13;
- if isfield(gdat_data.gdat_params,'nth_points') && ~isempty(gdat_data.gdat_params.nth_points)
- nth_points = gdat_data.gdat_params.nth_points;
- else
- gdat_data.gdat_params.nth_points = nth_points;
- end
- channels = -1;
- if isfield(gdat_data.gdat_params,'channels') && ~isempty(gdat_data.gdat_params.channels)
- channels = gdat_data.gdat_params.channels;
- end
- diag_name = 'cerqrot';
- if nth_points>=10
- match_rz_to_time = 1;
- else
- match_rz_to_time = 0;
- end
- if isfield(gdat_data.gdat_params,'match_rz_to_time') && ~isempty(gdat_data.gdat_params.match_rz_to_time)
- match_rz_to_time = gdat_data.gdat_params.match_rz_to_time;
- else
- gdat_data.gdat_params.match_rz_to_time = match_rz_to_time;
- end
- time_interval = [-Inf +Inf];
- if isfield(gdat_data.gdat_params,'time_interval') && ~isempty(gdat_data.gdat_params.time_interval)
- time_interval = gdat_data.gdat_params.time_interval;
- else
- gdat_data.gdat_params.time_interval = time_interval;
- end
- %
- if channels(1)<=0
- channels = [1:24];
- end
- chanelles=sort(channels);
- gdat_data.dim{1} = channels;
- gdat_data.gdat_params.channels = channels;
- max_points = 0;
- for i=channels
- aall{i} = gdat_d3d(shot,['\cerqrott' num2str(i)]);
- if isnumeric(aall{i}.data)
- gdat_data.channels_ok(i) = 1;
- if numel(aall{i}.data) > max_points
- max_points = numel(aall{i}.data);
- gdat_data.t = aall{i}.t;
- end
- else
- gdat_data.channels_ok(i) = 0;
- end
- end
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.data = NaN(max(channels),max_points);
- for i=channels
- if gdat_data.channels_ok(i)
- if nth_points>1
- ieff = [1:nth_points:numel(aall{i}.data)];
- iteff = iround_os(gdat_data.t,aall{i}.t(ieff));
- gdat_data.data(i,iteff) = interp1(aall{i}.t,aall{i}.data,gdat_data.t(iteff));
+ Lpf1 = Lpf1_t(it);
+ % Qpsi and similar data is on (time,radius) with radius being: LCFS..Lpf_points dummy LCFS..SOL part
+ % change it to (radial,time) and use only Lpf+1 points up to LCFS
+ ijok=find(qpsi.value(:,1)); % note: eqr fills in only odd points radially
+ % set NaNs to zeroes
+ if qpsi.value(ijok(1),1)<0
+ gdat_data.qvalue(:,it) = max(qpsi.value(it,Lpf1:-1:1)',-max_qValue);
else
- iteff = iround_os(gdat_data.t,aall{i}.t);
- gdat_data.data(i,iteff) = interp1(aall{i}.t,aall{i}.data,gdat_data.t(iteff));
+ gdat_data.qvalue(:,it) = min(qpsi.value(it,Lpf1:-1:1)',max_qValue);
end
+ % get x values
+ psi_it=psi_tree.value(it,Lpf1:-1:1)';
+ gdat_data.psi_axis(it)= psi_it(1);
+ gdat_data.psi_lcfs(it)= psi_it(end);
+ gdat_data.rhopolnorm(:,it) = sqrt(abs((psi_it-gdat_data.psi_axis(it)) ./(gdat_data.psi_lcfs(it)-gdat_data.psi_axis(it))));
+ if strcmp(DIAG,'EQR');
+ % q value has only a few values and from center to edge, assume they are from central rhopol values on
+ % But they are every other point starting from 3rd
+ ijk=find(gdat_data.qvalue(:,it)~=0);
+ if length(ijk)>2
+ % now shots have non-zero axis values in eqr
+ rhoeff=gdat_data.rhopolnorm(ijk,it);
+ qeff=gdat_data.qvalue(ijk,it); % radial order was already inverted above
+ if ijk(1)>1
+ rhoeff = [0.; rhoeff];
+ qeff = [qeff(1) ;qeff];
+ end
+ ij_nonan=find(~isnan(gdat_data.rhopolnorm(:,it)));
+ qfit = zeros(size(gdat_data.rhopolnorm(:,it)));
+ qfit(ij_nonan)=interpos(rhoeff,qeff,gdat_data.rhopolnorm(ij_nonan,it),-0.01,[1 0],[0 0],[300; ones(size(qeff(1:end-1)))]);
+ else
+ qfit = zeros(size(gdat_data.rhopolnorm(:,it)));
+ end
+ gdat_data.qvalue(:,it) = qfit;
+ end
+ % get rhotor values
+ phi_it = phi_tree.value(it,Lpf1:-1:1)';
+ gdat_data.rhotornorm(:,it) = sqrt(abs(phi_it ./ phi_it(end)));
+ % get rhovol values
+ vol_it=Vol.value(it,2*Lpf1-1:-2:1)';
+ gdat_data.rhovolnorm(:,it) = sqrt(abs(vol_it ./ vol_it(end)));
+ % Qpsi and similar data is on (time,radius) with radius being: LCFS..Lpf_points dummy LCFS..SOL part
+ % change it to (radial,time) and use only Lpf+1 points up to LCFS
+ ijok=find(qpsi.value(:,1)); % note: eqr fills in only odd points radially
+ % max value 1e6, change to 2*extrapolation (was max_qValue before)
+ q_edge=interpos(gdat_data.rhotornorm(1:end-1,it),qpsi.value(it,Lpf1:-1:2),1,-0.1);
+ gdat_data.qvalue(:,it) = qpsi.value(it,Lpf1:-1:1)';
+ if abs(gdat_data.qvalue(end,it)) > 1e3
+ % assume diverted
+ gdat_data.qvalue(end,it) = 2. * q_edge;
+ end
+% $$$ if qpsi.value(ijok(1),1)<0
+% $$$ gdat_data.qvalue(:,it) = max(qpsi.value(it,Lpf1:-1:1)',-max_qValue);
+% $$$ else
+% $$$ gdat_data.qvalue(:,it) = min(qpsi.value(it,Lpf1:-1:1)',max_qValue);
+% $$$ end
end
- end
- gdat_data.x = gdat_data.dim{1};
- gdat_data.dimunits=[{'channels'} ; {'time [s]'}];
- %if any(strcmp(fieldnames(a),'units')); gdat_data.units=a.units; end
- gdat_data.data_fullpath = [diag_name '\tcerqrot' num2str(channels(1)) '...' num2str(channels(end))];
- gdat_data.allchannels = aall;
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'rhotor', 'rhotor_edge', 'rhotor_norm', 'rhovol', 'volume_rho'}
- if strcmp(upper(gdat_data.gdat_params.equil),'FPG')
- gdat_params_prev = gdat_data.gdat_params; gdat_params_eff = gdat_params_prev;
- gdat_params_eff.data_request = [{'FPG'},{'Vol'},{'D3DD'}];
- gdat_data = gdat_d3d(gdat_data.shot,gdat_params_eff);
- gdat_data.gdat_params = gdat_params_prev;
- gdat_data.label = 'Vol';
- gdat_data.data_fullpath = [gdat_data.data_fullpath ' yields only edge Volume from FPG/Vol'];
- return
- end
- [gdat_data,exp_name_eff,DIAG,NTIME_Lpf,NTIME,Lpf1_t,Lpf_SOL] = get_EQ_params(gdat_data);
- % since Lpf depends on time, need to load all first and then loop over time for easier mapping
- [phi_tree,e]=rdaD3D_eff(shot,DIAG,'TFLx',exp_name_eff);
- ndimrho = size(phi_tree.data,2);
- if ndimrho==NTIME_Lpf
- % data seems to be transposed
- ndimrho = size(phi_tree.data,1);
- itotransposeback = 1; % seems x,time inverted so transpose and exchange .x and .t
- else
- itotransposeback = 0;
- end
- phi_tree=adapt_rda(phi_tree,NTIME,ndimrho,itotransposeback);
- ijnan=find(isnan(phi_tree.value));
- phi_tree.value(ijnan)=0;
- [Vol,e]=rdaD3D_eff(shot,DIAG,'Vol',exp_name_eff);
- Vol=adapt_rda(Vol,NTIME,2*ndimrho,itotransposeback);
- [psi_tree,e]=rdaD3D_eff(shot,DIAG,'PFL',exp_name_eff);
- psi_tree=adapt_rda(psi_tree,NTIME,ndimrho,itotransposeback);
- %
- switch data_request_eff
- case {'volume_rho', 'rhovol'}
- for it=1:NTIME
- Lpf1 = Lpf1_t(it);
- psi_it=psi_tree.value(it,Lpf1:-1:1)';
- psi_axis(it)= psi_it(1);
- psi_lcfs(it)= psi_it(end);
- gdat_data.x(:,it) = sqrt(abs((psi_it-psi_axis(it)) ./(psi_lcfs(it)-psi_axis(it))));
- gdat_data.vol(:,it)=Vol.value(it,2*Lpf1-1:-2:1)';
- % gdat_data.dvoldpsi(:,it)=Vol.value(it,2*Lpf1:-2:2)'; % 2nd index are dV/dpsi
- gdat_data.rhovolnorm(:,it) = sqrt(abs(gdat_data.vol(:,it) ./ gdat_data.vol(end,it)));
- end
+ gdat_data.x = gdat_data.rhopolnorm;
+ % get time values
+ gdat_data.data = gdat_data.qvalue; % put q in data
+ gdat_data.units=[]; % not applicable
+ gdat_data.data_fullpath = [DIAG ' from expname: ' gdat_data.gdat_params.exp_name '; q(rhopolnorm,t) in .data(.x,.t)'];
+ gdat_data.cocos = 17; % should check FPP
gdat_data.dim{1} = gdat_data.x;
gdat_data.dim{2} = gdat_data.t;
gdat_data.dimunits{1} = 'rhopolnorm';
gdat_data.dimunits{2} = 'time [s]';
- if strcmp(data_request_eff,'volume_rho')
- gdat_data.data = gdat_data.vol;
- gdat_data.units = Vol.units;
- else strcmp(data_request_eff,'rhovol')
- gdat_data.data = gdat_data.rhovolnorm;
- gdat_data.units = ' ';
- end
- case {'rhotor', 'rhotor_edge', 'rhotor_norm'}
- b0=gdat(shot,'b0');
- gdat_data.b0 = interpos(b0.t,b0.data,gdat_data.t,-1);
- for it=1:NTIME
- Lpf1 = Lpf1_t(it);
- gdat_data.phi(:,it) = phi_tree.value(it,Lpf1:-1:1)';
- gdat_data.rhotornorm(:,it) = sqrt(abs(gdat_data.phi(:,it) ./ gdat_data.phi(end,it)));
- gdat_data.rhotor(:,it) = sqrt(abs(gdat_data.phi(:,it) ./ gdat_data.b0(it) ./ pi));
- psi_it=psi_tree.value(it,Lpf1:-1:1)';
- psi_axis(it)= psi_it(1);
- psi_lcfs(it)= psi_it(end);
- gdat_data.x(:,it) = sqrt(abs((psi_it-psi_axis(it)) ./(psi_lcfs(it)-psi_axis(it))));
- end
- if strcmp(data_request_eff,'rhotor')
- gdat_data.data = gdat_data.rhotor;
- gdat_data.units = 'm';
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits{1} = 'rhopolnorm';
- gdat_data.dimunits{2} = 'time [s]';
- elseif strcmp(data_request_eff,'rhotor_edge')
- gdat_data.data = gdat_data.rhotor(end,:);
- gdat_data.units = 'm';
- gdat_data.dim{1} = gdat_data.t;
- gdat_data.dimunits{1} = 'time [s]';
- elseif strcmp(data_request_eff,'rhotor_norm')
- gdat_data.data = gdat_data.rhotornorm;
- gdat_data.units = ' ';
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits{1} = 'rhopolnorm';
- gdat_data.dimunits{2} = 'time [s]';
+
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'psi_axis', 'psi_edge'}
+ if strcmp(upper(gdat_data.gdat_params.equil),'FPG')
+ gdat_params_prev = gdat_data.gdat_params; gdat_params_eff = gdat_params_prev;
+ gdat_params_eff.data_request = [{'FPG'},{'fax-bnd'},{'D3DD'}];
+ gdat_data = gdat_d3d(gdat_data.shot,gdat_params_eff);
+ gdat_data.gdat_params = gdat_params_prev;
+ gdat_data.label = 'psi\_axis-psi\_edge';
+ gdat_data.data_fullpath = [gdat_data.data_fullpath ' yields only psi\_axis-psi\_edge from FPG/fax-bnd'];
+ else
+ [gdat_data,exp_name_eff,DIAG,NTIME_Lpf,NTIME,Lpf1_t,Lpf_SOL] = get_EQ_params(gdat_data);
+ % since Lpf depends on time, need to load all first and then loop over time for easier mapping
+ [psi_tree,e]=rdaD3D_eff(shot,DIAG,'PFL',exp_name_eff);
+ ndimrho = size(psi_tree.data,2);
+ if ndimrho==NTIME_Lpf
+ % data seems to be transposed
+ ndimrho = size(psi_tree.data,1);
+ itotransposeback = 1; % seems x,time inverted so transpose and exchange .x and .t
+ else
+ itotransposeback = 0;
+ end
+ psi_tree=adapt_rda(psi_tree,NTIME,ndimrho,itotransposeback);
+ ijnan=find(isnan(psi_tree.value));
+ psi_tree.value(ijnan)=0;
+ gdat_data.dim{1} = gdat_data.t;
+ gdat_data.dimunits{1} = 'time [s]';
+ for it=1:NTIME
+ Lpf1 = Lpf1_t(it);
+ psi_it=psi_tree.value(it,Lpf1:-1:1)';
+ if strcmp(data_request_eff,'psi_axis')
+ gdat_data.data(it)= psi_it(1);
+ elseif strcmp(data_request_eff,'psi_edge')
+ gdat_data.data(it)= psi_it(end);
+ else
+ end
+ end
+ gdat_data.units = psi_tree.units;
+ gdat_data.data_fullpath = [DIAG '/PFL extract ' data_request_eff];
end
- end
- gdat_data.data_fullpath = [DIAG '/PFL extract in .data: ' data_request_eff];
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'sxr'}
- % sxr from sx90rm1s by default or else if 'source' is provided
- if ~isfield(gdat_data.gdat_params,'freq')|| isempty(gdat_data.gdat_params.freq)
- gdat_data.gdat_params.freq = 1;
- end
- if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = 'sx90rm1s';
- end
- if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
- gdat_data.gdat_params.camera = [1:28];
- end
- gdat_data.gdat_params.source = upper(gdat_data.gdat_params.source);
- %
- if ~isfield(gdat_data.gdat_params,'time_interval')
- gdat_data.gdat_params.time_interval = [];
- end
- exp_name_eff = 'D3D';
- icount = 0;
- nnth = 1;
- if isnumeric(gdat_data.gdat_params.freq) && gdat_data.gdat_params.freq>1;
- nnth = floor(gdat_data.gdat_params.freq+0.5);
- gdat_data.gdat_params.freq = nnth;
- end
- for i=1:length(gdat_data.gdat_params.camera)
- tree = 'spectroscopy';
- ichord = gdat_data.gdat_params.camera(i);
- diagname = ['sxr:' gdat_data.gdat_params.source ':' gdat_data.gdat_params.source num2str(ichord,'%.2d')];
- a = gdat_d3d(shot,{tree,diagname});
- if ~isempty(a.data)
- icount = icount + 1;
- if icount == 1
- % first time has data
- gdat_data.t = a.t(1:nnth:end);
- gdat_data.units = a.units;
- gdat_data.data = NaN*ones(max(gdat_data.gdat_params.camera),length(gdat_data.t));
- gdat_data.x = [1:max(gdat_data.gdat_params.camera)]; % simpler to have index corresponding to chord number, except for central
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits = [{'chord nb'}; {'s'}];
- gdat_data.data_fullpath = ['sxr from source=''' gdat_data.gdat_params.source ''''];
- gdat_data.label = ['SXR/' upper(gdat_data.gdat_params.source)];
- end
- try
- gdat_data.data(ichord,:) = a.data(1:nnth:end);
- catch
- if (gdat_params.nverbose>=1); disp(['problem with ' gdat_data.gdat_params.source '...' num2str(ichord)]); end
- end
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'rot', 'cerqrot'}
+ nth_points = 13;
+ if isfield(gdat_data.gdat_params,'nth_points') && ~isempty(gdat_data.gdat_params.nth_points)
+ nth_points = gdat_data.gdat_params.nth_points;
else
- % add fields not yet defined in case all cases have empty data
+ gdat_data.gdat_params.nth_points = nth_points;
end
- end
- gdat_data.chords = gdat_data.gdat_params.camera;
+ channels = -1;
+ if isfield(gdat_data.gdat_params,'channels') && ~isempty(gdat_data.gdat_params.channels)
+ channels = gdat_data.gdat_params.channels;
+ end
+ diag_name = 'cerqrot';
+ if nth_points>=10
+ match_rz_to_time = 1;
+ else
+ match_rz_to_time = 0;
+ end
+ if isfield(gdat_data.gdat_params,'match_rz_to_time') && ~isempty(gdat_data.gdat_params.match_rz_to_time)
+ match_rz_to_time = gdat_data.gdat_params.match_rz_to_time;
+ else
+ gdat_data.gdat_params.match_rz_to_time = match_rz_to_time;
+ end
+ time_interval = [-Inf +Inf];
+ if isfield(gdat_data.gdat_params,'time_interval') && ~isempty(gdat_data.gdat_params.time_interval)
+ time_interval = gdat_data.gdat_params.time_interval;
+ else
+ gdat_data.gdat_params.time_interval = time_interval;
+ end
+ %
+ if channels(1)<=0
+ channels = [1:24];
+ end
+ chanelles=sort(channels);
+ gdat_data.dim{1} = channels;
+ gdat_data.gdat_params.channels = channels;
+ max_points = 0;
+ for i=channels
+ aall{i} = gdat_d3d(shot,['\cerqrott' num2str(i)]);
+ if isnumeric(aall{i}.data)
+ gdat_data.channels_ok(i) = 1;
+ if numel(aall{i}.data) > max_points
+ max_points = numel(aall{i}.data);
+ gdat_data.t = aall{i}.t;
+ end
+ else
+ gdat_data.channels_ok(i) = 0;
+ end
+ end
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.data = NaN(max(channels),max_points);
+ for i=channels
+ if gdat_data.channels_ok(i)
+ if nth_points>1
+ ieff = [1:nth_points:numel(aall{i}.data)];
+ iteff = iround_os(gdat_data.t,aall{i}.t(ieff));
+ gdat_data.data(i,iteff) = interp1(aall{i}.t,aall{i}.data,gdat_data.t(iteff));
+ else
+ iteff = iround_os(gdat_data.t,aall{i}.t);
+ gdat_data.data(i,iteff) = interp1(aall{i}.t,aall{i}.data,gdat_data.t(iteff));
+ end
+ end
+ end
+ gdat_data.x = gdat_data.dim{1};
+ gdat_data.dimunits=[{'channels'} ; {'time [s]'}];
+ %if any(strcmp(fieldnames(a),'units')); gdat_data.units=a.units; end
+ gdat_data.data_fullpath = [diag_name '\tcerqrot' num2str(channels(1)) '...' num2str(channels(end))];
+ gdat_data.allchannels = aall;
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'bolo', 'bolom'}
- % sxr from sx90rm1s by default or else if 'source' is provided
- if ~isfield(gdat_data.gdat_params,'freq')|| isempty(gdat_data.gdat_params.freq)
- gdat_data.gdat_params.freq = 1;
- end
- if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = 'BOL_L';
- end
- if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
- gdat_data.gdat_params.camera = [1:24];
- end
- gdat_data.gdat_params.source = upper(gdat_data.gdat_params.source);
- %
- if ~isfield(gdat_data.gdat_params,'time_interval')
- gdat_data.gdat_params.time_interval = [];
- end
- exp_name_eff = 'D3D';
- icount = 0;
- nnth = 1;
- if isnumeric(gdat_data.gdat_params.freq) && gdat_data.gdat_params.freq>1;
- nnth = floor(gdat_data.gdat_params.freq+0.5);
- gdat_data.gdat_params.freq = nnth;
- end
- tree = 'spectroscopy';
- gdat_data.gdat_params.tree = tree;
- for i=1:length(gdat_data.gdat_params.camera)
- ichord = gdat_data.gdat_params.camera(i);
- diagname = ['PRAD.BOLOM.PRAD_01.POWER:' gdat_data.gdat_params.source num2str(ichord,'%.2d') '_P'];
- a = gdat_d3d(shot,{tree,diagname});
- if ~isempty(a.data)
- icount = icount + 1;
- if icount == 1
- % first time has data
- gdat_data.t = a.t(1:nnth:end);
- gdat_data.units = a.units;
- gdat_data.data = NaN*ones(max(gdat_data.gdat_params.camera),length(gdat_data.t));
- gdat_data.x = [1:max(gdat_data.gdat_params.camera)]; % simpler to have index corresponding to chord number, except for central
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits = [{'chord nb'}; {'s'}];
- gdat_data.data_fullpath = ['bolo from source=''' gdat_data.gdat_params.source ''''];
- gdat_data.label = ['PRAD.BOLOM.PRAD\_01.POWER:' upper(gdat_data.gdat_params.source)];
- end
- try
- gdat_data.data(ichord,:) = a.data(1:nnth:end);
- catch
- if (gdat_params.nverbose>=1); disp(['problem with ' gdat_data.gdat_params.source '...' num2str(ichord)]); end
- end
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'rhotor', 'rhotor_edge', 'rhotor_norm', 'rhovol', 'volume_rho'}
+ if strcmp(upper(gdat_data.gdat_params.equil),'FPG')
+ gdat_params_prev = gdat_data.gdat_params; gdat_params_eff = gdat_params_prev;
+ gdat_params_eff.data_request = [{'FPG'},{'Vol'},{'D3DD'}];
+ gdat_data = gdat_d3d(gdat_data.shot,gdat_params_eff);
+ gdat_data.gdat_params = gdat_params_prev;
+ gdat_data.label = 'Vol';
+ gdat_data.data_fullpath = [gdat_data.data_fullpath ' yields only edge Volume from FPG/Vol'];
+ return
+ end
+ [gdat_data,exp_name_eff,DIAG,NTIME_Lpf,NTIME,Lpf1_t,Lpf_SOL] = get_EQ_params(gdat_data);
+ % since Lpf depends on time, need to load all first and then loop over time for easier mapping
+ [phi_tree,e]=rdaD3D_eff(shot,DIAG,'TFLx',exp_name_eff);
+ ndimrho = size(phi_tree.data,2);
+ if ndimrho==NTIME_Lpf
+ % data seems to be transposed
+ ndimrho = size(phi_tree.data,1);
+ itotransposeback = 1; % seems x,time inverted so transpose and exchange .x and .t
else
- % add fields not yet defined in case all cases have empty data
+ itotransposeback = 0;
end
- end
- gdat_data.chords = gdat_data.gdat_params.camera;
+ phi_tree=adapt_rda(phi_tree,NTIME,ndimrho,itotransposeback);
+ ijnan=find(isnan(phi_tree.value));
+ phi_tree.value(ijnan)=0;
+ [Vol,e]=rdaD3D_eff(shot,DIAG,'Vol',exp_name_eff);
+ Vol=adapt_rda(Vol,NTIME,2*ndimrho,itotransposeback);
+ [psi_tree,e]=rdaD3D_eff(shot,DIAG,'PFL',exp_name_eff);
+ psi_tree=adapt_rda(psi_tree,NTIME,ndimrho,itotransposeback);
+ %
+ switch data_request_eff
+ case {'volume_rho', 'rhovol'}
+ for it=1:NTIME
+ Lpf1 = Lpf1_t(it);
+ psi_it=psi_tree.value(it,Lpf1:-1:1)';
+ psi_axis(it)= psi_it(1);
+ psi_lcfs(it)= psi_it(end);
+ gdat_data.x(:,it) = sqrt(abs((psi_it-psi_axis(it)) ./(psi_lcfs(it)-psi_axis(it))));
+ gdat_data.vol(:,it)=Vol.value(it,2*Lpf1-1:-2:1)';
+ % gdat_data.dvoldpsi(:,it)=Vol.value(it,2*Lpf1:-2:2)'; % 2nd index are dV/dpsi
+ gdat_data.rhovolnorm(:,it) = sqrt(abs(gdat_data.vol(:,it) ./ gdat_data.vol(end,it)));
+ end
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits{1} = 'rhopolnorm';
+ gdat_data.dimunits{2} = 'time [s]';
+ if strcmp(data_request_eff,'volume_rho')
+ gdat_data.data = gdat_data.vol;
+ gdat_data.units = Vol.units;
+ else strcmp(data_request_eff,'rhovol')
+ gdat_data.data = gdat_data.rhovolnorm;
+ gdat_data.units = ' ';
+ end
+ case {'rhotor', 'rhotor_edge', 'rhotor_norm'}
+ b0=gdat(shot,'b0');
+ gdat_data.b0 = interpos(b0.t,b0.data,gdat_data.t,-1);
+ for it=1:NTIME
+ Lpf1 = Lpf1_t(it);
+ gdat_data.phi(:,it) = phi_tree.value(it,Lpf1:-1:1)';
+ gdat_data.rhotornorm(:,it) = sqrt(abs(gdat_data.phi(:,it) ./ gdat_data.phi(end,it)));
+ gdat_data.rhotor(:,it) = sqrt(abs(gdat_data.phi(:,it) ./ gdat_data.b0(it) ./ pi));
+ psi_it=psi_tree.value(it,Lpf1:-1:1)';
+ psi_axis(it)= psi_it(1);
+ psi_lcfs(it)= psi_it(end);
+ gdat_data.x(:,it) = sqrt(abs((psi_it-psi_axis(it)) ./(psi_lcfs(it)-psi_axis(it))));
+ end
+ if strcmp(data_request_eff,'rhotor')
+ gdat_data.data = gdat_data.rhotor;
+ gdat_data.units = 'm';
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits{1} = 'rhopolnorm';
+ gdat_data.dimunits{2} = 'time [s]';
+ elseif strcmp(data_request_eff,'rhotor_edge')
+ gdat_data.data = gdat_data.rhotor(end,:);
+ gdat_data.units = 'm';
+ gdat_data.dim{1} = gdat_data.t;
+ gdat_data.dimunits{1} = 'time [s]';
+ elseif strcmp(data_request_eff,'rhotor_norm')
+ gdat_data.data = gdat_data.rhotornorm;
+ gdat_data.units = ' ';
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits{1} = 'rhopolnorm';
+ gdat_data.dimunits{2} = 'time [s]';
+ end
+ end
+ gdat_data.data_fullpath = [DIAG '/PFL extract in .data: ' data_request_eff];
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'transp'}
- % most of the times the exp for the shotfile should be provided
- shotfile_exp_eff = gdat_params.exp_name;
- diagname='TRA';
- TRANSP_signals;
- for i=1:size(transp_sig,1)
- if strcmp(lower(transp_sig{i,2}),'signal') || strcmp(lower(transp_sig{i,2}),'signal-group')
- try
- eval(['[gdat_data.' transp_sig{i,1} ',e]=rdaD3D_eff(shot,diagname,''' transp_sig{i,1} ''',shotfile_exp_eff);']);
- catch
- eval(['gdat_data.' transp_sig{i,1} '=[];']);
- end
- elseif strcmp(lower(transp_sig{i,2}),'area-base')
- clear adata_area
- try
- [adata_area]=sf2ab(diagname,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
- catch
- adata_area.value = cell(0);
- end
- eval(['gdat_data.' transp_sig{i,1} '=adata_area;']);
- elseif strcmp(lower(transp_sig{i,2}),'time-base')
- clear adata_time
- try
- [adata_time]=sf2tb(diagname,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
- catch
- adata_time.value = cell(0);
- end
- eval(['gdat_data.' transp_sig{i,1} '=adata_time;']);
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'sxr'}
+ % sxr from sx90rm1s by default or else if 'source' is provided
+ if ~isfield(gdat_data.gdat_params,'freq')|| isempty(gdat_data.gdat_params.freq)
+ gdat_data.gdat_params.freq = 1;
end
- end
- % copy TIME to .t
- if isfield(gdat_data,'TIME') && isfield(gdat_data.TIME,'value')
- gdat_data.t = gdat_data.TIME.value;
- gdat_data.dim{1} = gdat_data.t,
- gdat_data.dimunits{1} = gdat_data.TIME.unit;
- end
+ if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
+ gdat_data.gdat_params.source = 'sx90rm1s';
+ end
+ if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
+ gdat_data.gdat_params.camera = [1:28];
+ end
+ gdat_data.gdat_params.source = upper(gdat_data.gdat_params.source);
+ %
+ if ~isfield(gdat_data.gdat_params,'time_interval')
+ gdat_data.gdat_params.time_interval = [];
+ end
+ exp_name_eff = 'D3D';
+ icount = 0;
+ nnth = 1;
+ if isnumeric(gdat_data.gdat_params.freq) && gdat_data.gdat_params.freq>1;
+ nnth = floor(gdat_data.gdat_params.freq+0.5);
+ gdat_data.gdat_params.freq = nnth;
+ end
+ for i=1:length(gdat_data.gdat_params.camera)
+ tree = 'spectroscopy';
+ ichord = gdat_data.gdat_params.camera(i);
+ diagname = ['sxr:' gdat_data.gdat_params.source ':' gdat_data.gdat_params.source num2str(ichord,'%.2d')];
+ a = gdat_d3d(shot,{tree,diagname});
+ if ~isempty(a.data)
+ icount = icount + 1;
+ if icount == 1
+ % first time has data
+ gdat_data.t = a.t(1:nnth:end);
+ gdat_data.units = a.units;
+ gdat_data.data = NaN*ones(max(gdat_data.gdat_params.camera),length(gdat_data.t));
+ gdat_data.x = [1:max(gdat_data.gdat_params.camera)]; % simpler to have index corresponding to chord number, except for central
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits = [{'chord nb'}; {'s'}];
+ gdat_data.data_fullpath = ['sxr from source=''' gdat_data.gdat_params.source ''''];
+ gdat_data.label = ['SXR/' upper(gdat_data.gdat_params.source)];
+ end
+ try
+ gdat_data.data(ichord,:) = a.data(1:nnth:end);
+ catch
+ if (gdat_params.nverbose>=1); disp(['problem with ' gdat_data.gdat_params.source '...' num2str(ichord)]); end
+ end
+ else
+ % add fields not yet defined in case all cases have empty data
+ end
+ end
+ gdat_data.chords = gdat_data.gdat_params.camera;
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'zeff_cerq', 'zeff_cer'}
- % zeff from specific cer lines, C, N, ...
- if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
- gdat_data.gdat_params.camera = [9 18 20 41];
- end
- gdat_data.label = {};
- for i=1:numel(gdat_data.gdat_params.camera)
- gdat_data.label{i} = ['cerqzefft' num2str(gdat_data.gdat_params.camera(i))];
- end
- %
- if ~isfield(gdat_data.gdat_params,'time_interval')
- gdat_data.gdat_params.time_interval = [];
- end
- icount = 0;
- for i=1:length(gdat_data.gdat_params.camera)
- ichord = gdat_data.gdat_params.camera(i);
- diagname = ['\' gdat_data.label{i}];
- a = gdat_d3d(shot,diagname);
- if ~isempty(a.data) && isnumeric(a.data)
- icount = icount + 1;
- if icount == 1
- % first time has data
- gdat_data.t = a.t;
- gdat_data.units = a.units;
- gdat_data.data = NaN*ones(numel(gdat_data.gdat_params.camera),length(gdat_data.t));
- gdat_data.data(icount,:) = a.data;
- gdat_data.x = gdat_data.gdat_params.camera;
- gdat_data.dim{1} = gdat_data.x;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.dimunits = [{'t nb'}; {'s'}];
- gdat_data.data_fullpath = '\cerqzefftii';
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'bolo', 'bolom'}
+ % sxr from sx90rm1s by default or else if 'source' is provided
+ if ~isfield(gdat_data.gdat_params,'freq')|| isempty(gdat_data.gdat_params.freq)
+ gdat_data.gdat_params.freq = 1;
+ end
+ if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
+ gdat_data.gdat_params.source = 'BOL_L';
+ end
+ if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
+ gdat_data.gdat_params.camera = [1:24];
+ end
+ gdat_data.gdat_params.source = upper(gdat_data.gdat_params.source);
+ %
+ if ~isfield(gdat_data.gdat_params,'time_interval')
+ gdat_data.gdat_params.time_interval = [];
+ end
+ exp_name_eff = 'D3D';
+ icount = 0;
+ nnth = 1;
+ if isnumeric(gdat_data.gdat_params.freq) && gdat_data.gdat_params.freq>1;
+ nnth = floor(gdat_data.gdat_params.freq+0.5);
+ gdat_data.gdat_params.freq = nnth;
+ end
+ tree = 'spectroscopy';
+ gdat_data.gdat_params.tree = tree;
+ for i=1:length(gdat_data.gdat_params.camera)
+ ichord = gdat_data.gdat_params.camera(i);
+ diagname = ['PRAD.BOLOM.PRAD_01.POWER:' gdat_data.gdat_params.source num2str(ichord,'%.2d') '_P'];
+ a = gdat_d3d(shot,{tree,diagname});
+ if ~isempty(a.data)
+ icount = icount + 1;
+ if icount == 1
+ % first time has data
+ gdat_data.t = a.t(1:nnth:end);
+ gdat_data.units = a.units;
+ gdat_data.data = NaN*ones(max(gdat_data.gdat_params.camera),length(gdat_data.t));
+ gdat_data.x = [1:max(gdat_data.gdat_params.camera)]; % simpler to have index corresponding to chord number, except for central
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits = [{'chord nb'}; {'s'}];
+ gdat_data.data_fullpath = ['bolo from source=''' gdat_data.gdat_params.source ''''];
+ gdat_data.label = ['PRAD.BOLOM.PRAD\_01.POWER:' upper(gdat_data.gdat_params.source)];
+ end
+ try
+ gdat_data.data(ichord,:) = a.data(1:nnth:end);
+ catch
+ if (gdat_params.nverbose>=1); disp(['problem with ' gdat_data.gdat_params.source '...' num2str(ichord)]); end
+ end
else
+ % add fields not yet defined in case all cases have empty data
+ end
+ end
+ gdat_data.chords = gdat_data.gdat_params.camera;
+
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'transp'}
+ % most of the times the exp for the shotfile should be provided
+ shotfile_exp_eff = gdat_params.exp_name;
+ diagname='TRA';
+ TRANSP_signals;
+ for i=1:size(transp_sig,1)
+ if strcmp(lower(transp_sig{i,2}),'signal') || strcmp(lower(transp_sig{i,2}),'signal-group')
try
- gdat_data.data(icount,:) = interp1(a.t,a.data,gdat_data.t);
+ eval(['[gdat_data.' transp_sig{i,1} ',e]=rdaD3D_eff(shot,diagname,''' transp_sig{i,1} ''',shotfile_exp_eff);']);
catch
- if (gdat_params.nverbose>=1); disp(['problem with ichord = ' num2str(ichord)]); end
+ eval(['gdat_data.' transp_sig{i,1} '=[];']);
end
+ elseif strcmp(lower(transp_sig{i,2}),'area-base')
+ clear adata_area
+ try
+ [adata_area]=sf2ab(diagname,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
+ catch
+ adata_area.value = cell(0);
+ end
+ eval(['gdat_data.' transp_sig{i,1} '=adata_area;']);
+ elseif strcmp(lower(transp_sig{i,2}),'time-base')
+ clear adata_time
+ try
+ [adata_time]=sf2tb(diagname,shot,transp_sig{i,1},'-exp',shotfile_exp_eff);
+ catch
+ adata_time.value = cell(0);
+ end
+ eval(['gdat_data.' transp_sig{i,1} '=adata_time;']);
end
- else
- % add fields not yet defined in case all cases have empty data
end
- end
- gdat_data.chords = gdat_data.gdat_params.camera;
+ % copy TIME to .t
+ if isfield(gdat_data,'TIME') && isfield(gdat_data.TIME,'value')
+ gdat_data.t = gdat_data.TIME.value;
+ gdat_data.dim{1} = gdat_data.t,
+ gdat_data.dimunits{1} = gdat_data.TIME.unit;
+ end
- otherwise
- if (gdat_params.nverbose>=1); warning(['switchcase= ' data_request_eff ' not known in gdat_d3d']); end
- error_status=901;
- return
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'zeff_cerq', 'zeff_cer'}
+ % zeff from specific cer lines, C, N, ...
+ if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
+ gdat_data.gdat_params.camera = [9 18 20 41];
+ end
+ gdat_data.label = {};
+ for i=1:numel(gdat_data.gdat_params.camera)
+ gdat_data.label{i} = ['cerqzefft' num2str(gdat_data.gdat_params.camera(i))];
+ end
+ %
+ if ~isfield(gdat_data.gdat_params,'time_interval')
+ gdat_data.gdat_params.time_interval = [];
+ end
+ icount = 0;
+ for i=1:length(gdat_data.gdat_params.camera)
+ ichord = gdat_data.gdat_params.camera(i);
+ diagname = ['\' gdat_data.label{i}];
+ a = gdat_d3d(shot,diagname);
+ if ~isempty(a.data) && isnumeric(a.data)
+ icount = icount + 1;
+ if icount == 1
+ % first time has data
+ gdat_data.t = a.t;
+ gdat_data.units = a.units;
+ gdat_data.data = NaN*ones(numel(gdat_data.gdat_params.camera),length(gdat_data.t));
+ gdat_data.data(icount,:) = a.data;
+ gdat_data.x = gdat_data.gdat_params.camera;
+ gdat_data.dim{1} = gdat_data.x;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.dimunits = [{'t nb'}; {'s'}];
+ gdat_data.data_fullpath = '\cerqzefftii';
+ else
+ try
+ gdat_data.data(icount,:) = interp1(a.t,a.data,gdat_data.t);
+ catch
+ if (gdat_params.nverbose>=1); disp(['problem with ichord = ' num2str(ichord)]); end
+ end
+ end
+ else
+ % add fields not yet defined in case all cases have empty data
+ end
+ end
+ gdat_data.chords = gdat_data.gdat_params.camera;
+
+ otherwise
+ if (gdat_params.nverbose>=1); warning(['switchcase= ' data_request_eff ' not known in gdat_d3d']); end
+ error_status=901;
+ return
end
else
diff --git a/matlab/IMAS/complete_IDS_CORSICA.m b/matlab/IMAS/complete_IDS_CORSICA.m
index f167093c5d619ee5c67213e3657e8a58285efc20..cebd796d5411b084a8c063d77fed1142915804e7 100644
--- a/matlab/IMAS/complete_IDS_CORSICA.m
+++ b/matlab/IMAS/complete_IDS_CORSICA.m
@@ -55,7 +55,7 @@ for ii = 1:numel(tmp.names)
% Remove strange character in coil names
IDS_out.pf_active.coil{jj}.name = regexprep(IDS_out.pf_active.coil{jj}.name,'[\n\r]+','');
if strcmp(tmp.names{ii},IDS_out.pf_active.coil{jj}.name)
- if isempty(IDS_out.pf_active.coil{jj}.element); IDS_out.pf_active.coil{jj}.element(1) = pf_active_default.coil{1}.element(1); end
+ if isempty(IDS_out.pf_active.coil{jj}.element); IDS_out.pf_active.coil{jj}.element(1) = pf_active_default.coil{1}.element(1); end
IDS_out.pf_active.coil{jj}.element{1}.geometry.geometry_type = 2; % Rectangle description
IDS_out.pf_active.coil{jj}.element{1}.geometry.rectangle.r = tmp.R(ii);
IDS_out.pf_active.coil{jj}.element{1}.geometry.rectangle.z = tmp.Z(ii);
@@ -77,10 +77,10 @@ IDS_out.pf_active.time = [];
IDS_out.pf_active.ids_properties.homogeneous_time = 0;
if Ncircuit_eff > Ncircuit_in
IDS_out.pf_active.circuit(Ncircuit_in+1:Ncircuit_eff,1) = pf_active_default.circuit(1);
-end
+end
if Ncircuit_eff > Nsupply_in
IDS_out.pf_active.supply(Nsupply_in+1:Ncircuit_eff,1) = pf_active_default.supply(1);
-end
+end
for ii=1:Ncircuit_eff
IDS_out.pf_active.circuit{ii}.name = tmp{ii,1}{1};
IDS_out.pf_active.supply{ii}.name = tmp{ii,1}{1};
@@ -95,16 +95,16 @@ for ii=1:Ncircuit_eff
% The coils must share the same current in the circuit so just take the first one.
IDS_out.pf_active.circuit{ii}.current.data = IDS_out.pf_active.coil{index_coil(1)}.current.data/IDS_out.pf_active.coil{index_coil(1)}.element{1}.turns_with_sign;
IDS_out.pf_active.circuit{ii}.current.time = IDS_out.pf_active.coil{index_coil(1)}.current.time;
-
+
IDS_out.pf_active.circuit{ii}.connections = zeros(2*numel(index_coil) -1 , 2*Ncircuit_eff + 2*Ncoils);
for jj = 1:numel(index_coil)
IDS_out.pf_active.circuit{ii}.connections( jj , 2*Ncircuit_eff + 2*(index_coil(jj)-1) +1) = 1;
IDS_out.pf_active.circuit{ii}.connections( jj +1 , 2*Ncircuit_eff + 2*(index_coil(jj)-1) +2) = 1;
end
-
+
% Add the connection to the power supply
- IDS_out.pf_active.circuit{ii}.connections(1, 2*ii -1) = 1;
- IDS_out.pf_active.circuit{ii}.connections(end, 2*ii ) =1;
+ IDS_out.pf_active.circuit{ii}.connections(1, 2*ii -1) = 1;
+ IDS_out.pf_active.circuit{ii}.connections(end, 2*ii ) =1;
end
%% Limiter description
diff --git a/matlab/IMAS/data_limiter.m b/matlab/IMAS/data_limiter.m
index 25c05615178e26d33dbd5c6b5314931b9d288fc2..f816c3ecaff935c2272a2aade8e229c298285c43 100644
--- a/matlab/IMAS/data_limiter.m
+++ b/matlab/IMAS/data_limiter.m
@@ -1,7 +1,7 @@
function data_struct = data_limiter()
-% Data from
-%Plasma facing line of First Wall and Divertor
-%Reference: [2N9J75, v.1.7], [PCR 641, PS4HQW]
+% Data from
+%Plasma facing line of First Wall and Divertor
+%Reference: [2N9J75, v.1.7], [PCR 641, PS4HQW]
R = [...
4.1761
diff --git a/matlab/IMAS/data_vessel.m b/matlab/IMAS/data_vessel.m
index d2ebe7f592f82567db19690d8486217b87fee47f..9ccdcdebd124f2106c7072e904db5bf9eb5a7d31 100644
--- a/matlab/IMAS/data_vessel.m
+++ b/matlab/IMAS/data_vessel.m
@@ -1,6 +1,6 @@
function vessel_data = data_vessel()
-% Plasma facing line of First Wall and Divertor
-%Reference: [2N9J75, v.1.7], [PCR 641, PS4HQW]
+% Plasma facing line of First Wall and Divertor
+%Reference: [2N9J75, v.1.7], [PCR 641, PS4HQW]
rin = [ ...
diff --git a/matlab/IMAS/gdat_imas.m b/matlab/IMAS/gdat_imas.m
index 24c3e6db505c8a10fe9e28ec27b1a275547e252f..88b72b2f647f2f8ca0bb8b09601439ac62e11e9d 100644
--- a/matlab/IMAS/gdat_imas.m
+++ b/matlab/IMAS/gdat_imas.m
@@ -211,7 +211,7 @@ if (nargin>=ivarargin_first_char)
if mod(nargin-ivarargin_first_char+1,2)==0
for i=1:2:nargin-ivarargin_first_char+1
if ischar(varargin_eff{i})
- gdat_params.(lower(varargin_eff{i})) = varargin_eff{i+1}; % cannot enforce lower(params value) if filename or else are case sensitive
+ gdat_params.(lower(varargin_eff{i})) = varargin_eff{i+1}; % cannot enforce lower(params value) if filename or else are case sensitive
else
if gdat_params.nverbose>=1; warning(['input argument nb: ' num2str(i) ' is incorrect, expects a character string']); end
error_status=401;
@@ -286,7 +286,7 @@ if do_mdsopen_mdsclose
end
try
gdat_data.gdat_params.idx_imas_open_env = imas_open_env('ids', shot, gdat_data.gdat_params.run,gdat_data.gdat_params.database_user, ...
- gdat_data.gdat_params.tokamak_name,gdat_data.gdat_params.data_major_version);
+ gdat_data.gdat_params.tokamak_name,gdat_data.gdat_params.data_major_version);
disp('')
catch ME
warning('could not imas_open_env with following gdat_data.gdat_params:');
@@ -304,16 +304,16 @@ else
if isfield(gdat_data.gdat_params,'idx_imas_open_env')
if gdat_data.gdat_params.idx_imas_open_env < 0
if gdat_data.gdat_params.nverbose>=1
- warning(['idx < 0, shot/run not opened properly with gdat_data.gdat_params:']);
- gdat_data.gdat_params
+ warning(['idx < 0, shot/run not opened properly with gdat_data.gdat_params:']);
+ gdat_data.gdat_params
end
return
end
else
if ~isempty(shot)
if gdat_data.gdat_params.nverbose>=1
- warning(['no idx in gdat_params, cannot open shot with gdat_data.gdat_params:']);
- gdat_data.gdat_params
+ warning(['no idx in gdat_params, cannot open shot with gdat_data.gdat_params:']);
+ gdat_data.gdat_params
end
return
end
@@ -389,167 +389,167 @@ elseif strcmp(mapping_for_imas.method,'switchcase')
% First the request names valid for "all" machines:
%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'ids'}
- ids_empty_path = fullfile(fileparts(mfilename('fullpath')),'..','IMAS_IMAS','ids_empty');
+ case {'ids'}
+ ids_empty_path = fullfile(fileparts(mfilename('fullpath')),'..','IMAS_IMAS','ids_empty');
- params_eff = gdat_data.gdat_params;
- if isfield(params_eff,'source') && ~isempty(params_eff.source)
- ids_top_names = params_eff.source;
- if ischar(ids_top_names); ids_top_names = {ids_top_names}; end
- else
- ids_top_name = [];
- warning('gdat:EmptyIDSName','Need an ids name in ''source'' parameter\n check substructure gdat_params.sources_available for an ids list');
- addpath(ids_empty_path);
- assert(~~exist('ids_list','file'),'could not find ids_list.m in %s',ids_empty_path);
- gdat_data.gdat_params.sources_available = ids_list;
- rmpath(ids_empty_path);
- return
- end
- if ~isfield(params_eff,'fix_homogeneous') || isempty(params_eff.fix_homogeneous)
- params_eff.fix_homogeneous = 0;
- gdat_data.gdat_params.fix_homogeneous = params_eff.fix_homogeneous;
- end
- ids_gen_ok = ~~exist('ids_gen','file');
- if ~isfield(gdat_data.gdat_params,'error_bar') || isempty(gdat_data.gdat_params.error_bar)
- gdat_data.gdat_params.error_bar = 'delta';
- end
- if ~isfield(gdat_data.gdat_params,'cocos_in') || isempty(gdat_data.gdat_params.cocos_in)
- gdat_data.gdat_params.cocos_in = 11;
- end
- if ~isfield(gdat_data.gdat_params,'cocos_out') || isempty(gdat_data.gdat_params.cocos_out)
- gdat_data.gdat_params.cocos_out = 11;
- end
- if ~isfield(gdat_data.gdat_params,'ipsign_out') || isempty(gdat_data.gdat_params.ipsign_out)
- gdat_data.gdat_params.ipsign_out = 0;
- end
- if ~isfield(gdat_data.gdat_params,'b0sign_out') || isempty(gdat_data.gdat_params.b0sign_out)
- gdat_data.gdat_params.b0sign_out = 0;
- end
- if ~isfield(gdat_data.gdat_params,'ipsign_in') || isempty(gdat_data.gdat_params.ipsign_in)
- if gdat_data.gdat_params.ipsign_out~=0
- gdat_data.gdat_params.ipsign_in = -1;
+ params_eff = gdat_data.gdat_params;
+ if isfield(params_eff,'source') && ~isempty(params_eff.source)
+ ids_top_names = params_eff.source;
+ if ischar(ids_top_names); ids_top_names = {ids_top_names}; end
else
- gdat_data.gdat_params.ipsign_in = 0;
+ ids_top_name = [];
+ warning('gdat:EmptyIDSName','Need an ids name in ''source'' parameter\n check substructure gdat_params.sources_available for an ids list');
+ addpath(ids_empty_path);
+ assert(~~exist('ids_list','file'),'could not find ids_list.m in %s',ids_empty_path);
+ gdat_data.gdat_params.sources_available = ids_list;
+ rmpath(ids_empty_path);
+ return
end
- end
- if ~isfield(gdat_data.gdat_params,'b0sign_in') || isempty(gdat_data.gdat_params.b0sign_in)
- if gdat_data.gdat_params.b0sign_out~=0
- gdat_data.gdat_params.b0sign_in = -1;
- else
- gdat_data.gdat_params.b0sign_in = 0;
+ if ~isfield(params_eff,'fix_homogeneous') || isempty(params_eff.fix_homogeneous)
+ params_eff.fix_homogeneous = 0;
+ gdat_data.gdat_params.fix_homogeneous = params_eff.fix_homogeneous;
end
- end
- for i=1:length(ids_top_names)
- ids_top_name = ids_top_names{i};
- if ids_gen_ok
- ids_empty = ids_gen(ids_top_name); % generate ids from ids_gen
- else
- % load empty ids structure from template file
- fname = sprintf('ids_empty_%s',ids_top_name);
- try
- assert(~~exist(ids_empty_path,'dir'),'folder %s not found',ids_empty_path);
- addpath(ids_empty_path);
- assert(~~exist(fname,'file'),'file %s does not exist in %s',fname,ids_empty_path);
-
- ids_empty = eval(fname);
- disp(['use structure in .mat file: ' ids_empty_path '/' fname]);
- rmpath(ids_empty_path);
- catch ME
- fprintf('Could not load empty template for %s\n',ids_top_name);
- fprintf('Available templates:\n');
- disp(dir(ids_empty_path));
- rmpath(ids_empty_path);
- rethrow(ME);
- end
+ ids_gen_ok = ~~exist('ids_gen','file');
+ if ~isfield(gdat_data.gdat_params,'error_bar') || isempty(gdat_data.gdat_params.error_bar)
+ gdat_data.gdat_params.error_bar = 'delta';
end
- % load data
- try
- if isfield(gdat_data.gdat_params,'idx_imas_open_env') && gdat_data.gdat_params.idx_imas_open_env >= 0
- if gdat_data.gdat_params.occurence == 0
- ids_top = ids_get(gdat_data.gdat_params.idx_imas_open_env,ids_top_name);
- else
- ids_top = ids_get(gdat_data.gdat_params.idx_imas_open_env,[ids_top_name '/' num2str(gdat_data.gdat_params.occurence)]);
- end
- gdat_data.(ids_top_name) = ids_top;
- else
- gdat_data.(ids_top_name) = ids_empty;
- return
- end
- catch ME_imas_ids_get
- disp(['there is a problem with: imas_get_ids_' ids_top_name ...
- ' , may be check if it exists in your path or test it by itself'])
- gdat_data.(ids_top_name) = ids_empty;
- gdat_data.([ids_top_name '_help']) = getReport(ME_imas_ids_get);
- rethrow(ME_imas_ids_get)
+ if ~isfield(gdat_data.gdat_params,'cocos_in') || isempty(gdat_data.gdat_params.cocos_in)
+ gdat_data.gdat_params.cocos_in = 11;
end
- % check homogeneous
- switch gdat_data.(ids_top_name).ids_properties.homogeneous_time
- case -999999999
- warning([ids_top_name '.ids_properties.homogeneous_time is not defined']);
- if isempty(gdat_data.(ids_top_name).time)
- if gdat_data.gdat_params.fix_homogeneous
- gdat_data.(ids_top_name).ids_properties.homogeneous_time = 0;
- warning([ids_top_name '.ids_properties.homogeneous_time set to 0 since .time empty']);
- end
- elseif isfinite(gdat_data.(ids_top_name).time)
- if gdat_data.gdat_params.fix_homogeneous
- gdat_data.(ids_top_name).ids_properties.homogeneous_time = 1;
- warning([ids_top_name '.ids_properties.homogeneous_time set to 1 since .time finite']);
- end
- end
- case 0
- if ~isempty(gdat_data.(ids_top_name).time)
- disp([ids_top_name '.ids_properties.homogeneous_time=0 but .time not empty, to check'])
- end
- case 1
- if isempty(gdat_data.(ids_top_name).time)
- disp([ids_top_name '.ids_properties.homogeneous_time=1 but .time empty, to check'])
- end
- otherwise
- warning([ids_top_name '.ids_properties.homogeneous_time = ' num2str(gdat_data.(ids_top_name).ids_properties.homogeneous_time) ...
- ' not sure what to check'])
+ if ~isfield(gdat_data.gdat_params,'cocos_out') || isempty(gdat_data.gdat_params.cocos_out)
+ gdat_data.gdat_params.cocos_out = 11;
end
- % Perform cocos transformation if cocos_out ~= cocos_in
- if gdat_data.gdat_params.cocos_in ~= gdat_data.gdat_params.cocos_out
- [ids_out,cocoscoeff]=ids_generic_cocos_nodes_transformation_symbolic(gdat_data.(ids_top_name),ids_top_name, ...
- gdat_data.gdat_params.cocos_in, gdat_data.gdat_params.cocos_out, gdat_data.gdat_params.ipsign_out,gdat_data.gdat_params.b0sign_out, ...
- gdat_data.gdat_params.ipsign_in, gdat_data.gdat_params.b0sign_in);
- gdat_data.(ids_top_name) = ids_out;
+ if ~isfield(gdat_data.gdat_params,'ipsign_out') || isempty(gdat_data.gdat_params.ipsign_out)
+ gdat_data.gdat_params.ipsign_out = 0;
end
- end
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'eqdsk'}
- % add defaults
- if ~isfield(gdat_data.gdat_params,'time')
- gdat_data.gdat_params.time = 1.; % default time
- end
- if ~isfield(gdat_data.gdat_params,'write')
- gdat_data.gdat_params.write = 1; % default write eqdsk to /tmp/username
- end
- params_eff = gdat_data.gdat_params;
- params_eff = rmfield(params_eff,'time');
- params_eff.data_request = 'ids';
- params_eff.source = 'equilibrium';
- gdat_equil = gdat_imas(shot,params_eff);
- params_eff.source = 'wall';
- gdat_wall = gdat_imas(shot,params_eff);
- %
- eqdsk_filename_suffix = [num2str(gdat_data.shot) '_' num2str(gdat_data.gdat_params.run) 't' num2str(gdat_data.gdat_params.time) ...
- gdat_data.gdat_params.tokamak_name '_' gdat_data.gdat_params.database_user];
- [eqdsk_out] = ids2eqdsk(gdat_equil.equilibrium,gdat_wall.wall,gdat_data.gdat_params.time,eqdsk_filename_suffix,gdat_data.gdat_params.write);
- gdat_data.equilibrium = gdat_equil.equilibrium;
- gdat_data.wall = gdat_wall.wall;
- gdat_data.eqdsk = eqdsk_out;
- if isfield(gdat_data.gdat_params,'doplot') && gdat_data.gdat_params.doplot == 1
- plot_eqdsk(gdat_data.eqdsk)
- end
-
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- otherwise
- if (gdat_params.nverbose>=1); warning(['switchcase= ' data_request_eff ' not known in gdat_imas']); end
- error_status=901;
- return
+ if ~isfield(gdat_data.gdat_params,'b0sign_out') || isempty(gdat_data.gdat_params.b0sign_out)
+ gdat_data.gdat_params.b0sign_out = 0;
+ end
+ if ~isfield(gdat_data.gdat_params,'ipsign_in') || isempty(gdat_data.gdat_params.ipsign_in)
+ if gdat_data.gdat_params.ipsign_out~=0
+ gdat_data.gdat_params.ipsign_in = -1;
+ else
+ gdat_data.gdat_params.ipsign_in = 0;
+ end
+ end
+ if ~isfield(gdat_data.gdat_params,'b0sign_in') || isempty(gdat_data.gdat_params.b0sign_in)
+ if gdat_data.gdat_params.b0sign_out~=0
+ gdat_data.gdat_params.b0sign_in = -1;
+ else
+ gdat_data.gdat_params.b0sign_in = 0;
+ end
+ end
+ for i=1:length(ids_top_names)
+ ids_top_name = ids_top_names{i};
+ if ids_gen_ok
+ ids_empty = ids_gen(ids_top_name); % generate ids from ids_gen
+ else
+ % load empty ids structure from template file
+ fname = sprintf('ids_empty_%s',ids_top_name);
+ try
+ assert(~~exist(ids_empty_path,'dir'),'folder %s not found',ids_empty_path);
+ addpath(ids_empty_path);
+ assert(~~exist(fname,'file'),'file %s does not exist in %s',fname,ids_empty_path);
+
+ ids_empty = eval(fname);
+ disp(['use structure in .mat file: ' ids_empty_path '/' fname]);
+ rmpath(ids_empty_path);
+ catch ME
+ fprintf('Could not load empty template for %s\n',ids_top_name);
+ fprintf('Available templates:\n');
+ disp(dir(ids_empty_path));
+ rmpath(ids_empty_path);
+ rethrow(ME);
+ end
+ end
+ % load data
+ try
+ if isfield(gdat_data.gdat_params,'idx_imas_open_env') && gdat_data.gdat_params.idx_imas_open_env >= 0
+ if gdat_data.gdat_params.occurence == 0
+ ids_top = ids_get(gdat_data.gdat_params.idx_imas_open_env,ids_top_name);
+ else
+ ids_top = ids_get(gdat_data.gdat_params.idx_imas_open_env,[ids_top_name '/' num2str(gdat_data.gdat_params.occurence)]);
+ end
+ gdat_data.(ids_top_name) = ids_top;
+ else
+ gdat_data.(ids_top_name) = ids_empty;
+ return
+ end
+ catch ME_imas_ids_get
+ disp(['there is a problem with: imas_get_ids_' ids_top_name ...
+ ' , may be check if it exists in your path or test it by itself'])
+ gdat_data.(ids_top_name) = ids_empty;
+ gdat_data.([ids_top_name '_help']) = getReport(ME_imas_ids_get);
+ rethrow(ME_imas_ids_get)
+ end
+ % check homogeneous
+ switch gdat_data.(ids_top_name).ids_properties.homogeneous_time
+ case -999999999
+ warning([ids_top_name '.ids_properties.homogeneous_time is not defined']);
+ if isempty(gdat_data.(ids_top_name).time)
+ if gdat_data.gdat_params.fix_homogeneous
+ gdat_data.(ids_top_name).ids_properties.homogeneous_time = 0;
+ warning([ids_top_name '.ids_properties.homogeneous_time set to 0 since .time empty']);
+ end
+ elseif isfinite(gdat_data.(ids_top_name).time)
+ if gdat_data.gdat_params.fix_homogeneous
+ gdat_data.(ids_top_name).ids_properties.homogeneous_time = 1;
+ warning([ids_top_name '.ids_properties.homogeneous_time set to 1 since .time finite']);
+ end
+ end
+ case 0
+ if ~isempty(gdat_data.(ids_top_name).time)
+ disp([ids_top_name '.ids_properties.homogeneous_time=0 but .time not empty, to check'])
+ end
+ case 1
+ if isempty(gdat_data.(ids_top_name).time)
+ disp([ids_top_name '.ids_properties.homogeneous_time=1 but .time empty, to check'])
+ end
+ otherwise
+ warning([ids_top_name '.ids_properties.homogeneous_time = ' num2str(gdat_data.(ids_top_name).ids_properties.homogeneous_time) ...
+ ' not sure what to check'])
+ end
+ % Perform cocos transformation if cocos_out ~= cocos_in
+ if gdat_data.gdat_params.cocos_in ~= gdat_data.gdat_params.cocos_out
+ [ids_out,cocoscoeff]=ids_generic_cocos_nodes_transformation_symbolic(gdat_data.(ids_top_name),ids_top_name, ...
+ gdat_data.gdat_params.cocos_in, gdat_data.gdat_params.cocos_out, gdat_data.gdat_params.ipsign_out,gdat_data.gdat_params.b0sign_out, ...
+ gdat_data.gdat_params.ipsign_in, gdat_data.gdat_params.b0sign_in);
+ gdat_data.(ids_top_name) = ids_out;
+ end
+ end
+
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'eqdsk'}
+ % add defaults
+ if ~isfield(gdat_data.gdat_params,'time')
+ gdat_data.gdat_params.time = 1.; % default time
+ end
+ if ~isfield(gdat_data.gdat_params,'write')
+ gdat_data.gdat_params.write = 1; % default write eqdsk to /tmp/username
+ end
+ params_eff = gdat_data.gdat_params;
+ params_eff = rmfield(params_eff,'time');
+ params_eff.data_request = 'ids';
+ params_eff.source = 'equilibrium';
+ gdat_equil = gdat_imas(shot,params_eff);
+ params_eff.source = 'wall';
+ gdat_wall = gdat_imas(shot,params_eff);
+ %
+ eqdsk_filename_suffix = [num2str(gdat_data.shot) '_' num2str(gdat_data.gdat_params.run) 't' num2str(gdat_data.gdat_params.time) ...
+ gdat_data.gdat_params.tokamak_name '_' gdat_data.gdat_params.database_user];
+ [eqdsk_out] = ids2eqdsk(gdat_equil.equilibrium,gdat_wall.wall,gdat_data.gdat_params.time,eqdsk_filename_suffix,gdat_data.gdat_params.write);
+ gdat_data.equilibrium = gdat_equil.equilibrium;
+ gdat_data.wall = gdat_wall.wall;
+ gdat_data.eqdsk = eqdsk_out;
+ if isfield(gdat_data.gdat_params,'doplot') && gdat_data.gdat_params.doplot == 1
+ plot_eqdsk(gdat_data.eqdsk)
+ end
+
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ otherwise
+ if (gdat_params.nverbose>=1); warning(['switchcase= ' data_request_eff ' not known in gdat_imas']); end
+ error_status=901;
+ return
end
else
@@ -625,7 +625,7 @@ else
end
if ~isempty(tracefirrat.data) && ~ischar(tracefirrat.data) && any(isfinite(tracefirrat.data)) ...
- && ~isempty(tracefirrat.dim) && ~isempty(tracefirrat.dim{1})
+ && ~isempty(tracefirrat.dim) && ~isempty(tracefirrat.dim{1})
firthomratio = interp1(tracefirrat.dim{1},tracefirrat.data,timebase);
end
diff --git a/matlab/JET/gdat_jet.m b/matlab/JET/gdat_jet.m
index 28b88ef5f6820c6173966b4fbf3cdb4b58a47e17..d522d546b81f183e28ccfc711951c545308688c7 100644
--- a/matlab/JET/gdat_jet.m
+++ b/matlab/JET/gdat_jet.m
@@ -220,8 +220,8 @@ if ~isempty(ij);
else
if ~iscell(data_request_eff) && ischar(data_request_eff)
warning(['data_request: ' data_request_eff ' is not a pre-defined data_request nor a cell array with signal to get' char(10) ...
- 'data_request probably not yet defined, ask O. Sauter if needed; check data_requests defined with' char(10) ...
- 'aa=gdat(''machine'',''jet'');aa.gdat_request']);
+ 'data_request probably not yet defined, ask O. Sauter if needed; check data_requests defined with' char(10) ...
+ 'aa=gdat(''machine'',''jet'');aa.gdat_request']);
return
end
end
@@ -280,9 +280,9 @@ if strcmp(mapping_for_jet.method,'signal')
elseif length(size(aatmp.data))==2
% 2 true dimensions
if length(aatmp.t) == size(aatmp.data,1)
- mapping_for_jet.timedim = 1;
+ mapping_for_jet.timedim = 1;
else
- mapping_for_jet.timedim = 2;
+ mapping_for_jet.timedim = 2;
end
else
% more than 2 dimensions, find the one with same length to define timedim
@@ -304,9 +304,9 @@ if strcmp(mapping_for_jet.method,'signal')
nbdims = length(size(gdat_data.data));
for i=1:nbdims
if i~=mapping_for_jet.timedim
- ieff=i;
- if i>mapping_for_jet.timedim; ieff=i-1; end
- gdat_data.dim{i} = gdat_data.x{ieff};
+ ieff=i;
+ if i>mapping_for_jet.timedim; ieff=i-1; end
+ gdat_data.dim{i} = gdat_data.x{ieff};
end
end
end
@@ -401,80 +401,122 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'cxrs'}
- %not yet finished, just started
- % load typical data from cxrs, Ti, ni, vtori and vpoli (if available), as well as zeff from cxrs
- % if 'fit' option is added: 'fit',1, then the fitted profiles are returned
- %
- % sub_nodes names from CXRS_get_profiles function, lower case when used in gdat
- sub_nodes = {'Ti','vTor','vPol','nC','Zeff'}; % first node is also copied into data, choose "default' one
- sub_nodes_out = lower({'Ti','vTor','vPol','ni','Zeff'}); %
- sub_nodes_units = {'eV','m/s','m/s','m^{-3}',''}; % first node is also copied into data, choose "default' one
- % use A. Karpushov routine to get profiles and then copy the data or the fitted profiles
- aa=CXRS_get_profiles; cxrs_params = aa.param;
- cxrs_params.k_plot=0; cxrs_params.k_debug=0;
- % add params from gdat call
- params_eff = gdat_data.gdat_params;
- if isfield(params_eff,'cxrs_plot') && params_eff.cxrs_plot>0
- cxrs_plot = params_eff.cxrs_plot;
- else
- cxrs_plot = 0;
- end
- gdat_data.gdat_params.cxrs_plot = cxrs_plot;
- if isfield(params_eff,'source') && ~isempty(params_eff.source)
- source = params_eff.source;
- else
- source = [1 2 3];
- end
- gdat_data.gdat_params.source = source;
- if isfield(params_eff,'time_interval') && ~isempty(params_eff.time_interval) && length(params_eff.time_interval)>=2
- time_interval = params_eff.time_interval;
- cxrs_plot=1;
- else
- time_interval = [];
- end
- gdat_data.gdat_params.time_interval = time_interval;
- gdat_data.gdat_params.cxrs_plot = cxrs_plot;
- fit_tension_default = -100.;
- if isfield(params_eff,'fit_tension')
- fit_tension = params_eff.fit_tension;
- else
- fit_tension = fit_tension_default;
- end
- if ~isstruct(fit_tension)
- fit_tension_eff.ti = fit_tension;
- fit_tension_eff.vi = fit_tension;
- fit_tension_eff.ni = fit_tension;
- fit_tension_eff.zeff = fit_tension;
- fit_tension = fit_tension_eff;
- else
- if ~isfield(fit_tension,'ti'); fit_tension.ti = fit_tension_default; end
- if ~isfield(fit_tension,'vi'); fit_tension.vi = fit_tension_default; end
- if ~isfield(fit_tension,'ni') && ~isfield(fit_tension,'nc'); fit_tension.ni = fit_tension_default; end
- if ~isfield(fit_tension,'zeff'); fit_tension.zeff = fit_tension_default; end
- end
- gdat_data.gdat_params.fit_tension = fit_tension;
- cxrs_params.prof.Ti.taus = fit_tension.ti;
- cxrs_params.prof.vi.taus = fit_tension.vi;
- cxrs_params.prof.nc.taus = fit_tension.ni;
- cxrs_params.prof.zeff.taus = fit_tension.zeff;
- cxrs_params.k_plot = cxrs_plot;
- cxrs_profiles = CXRS_get_profiles(shot,source,time_interval,cxrs_params);
- inb_times = length(cxrs_profiles.Times);
- gdat_data.cxrs_params = cxrs_profiles.param;
- if isempty(cxrs_profiles.Times) || ~isfield(cxrs_profiles,'proffit')
- if (gdat_params.nverbose>=1); warning(['problems loading data with CXRS_get_profiles for data_request= ' data_request_eff]); end
+ case {'cxrs'}
+ %not yet finished, just started
+ % load typical data from cxrs, Ti, ni, vtori and vpoli (if available), as well as zeff from cxrs
+ % if 'fit' option is added: 'fit',1, then the fitted profiles are returned
+ %
+ % sub_nodes names from CXRS_get_profiles function, lower case when used in gdat
+ sub_nodes = {'Ti','vTor','vPol','nC','Zeff'}; % first node is also copied into data, choose "default' one
+ sub_nodes_out = lower({'Ti','vTor','vPol','ni','Zeff'}); %
+ sub_nodes_units = {'eV','m/s','m/s','m^{-3}',''}; % first node is also copied into data, choose "default' one
+ % use A. Karpushov routine to get profiles and then copy the data or the fitted profiles
+ aa=CXRS_get_profiles; cxrs_params = aa.param;
+ cxrs_params.k_plot=0; cxrs_params.k_debug=0;
+ % add params from gdat call
+ params_eff = gdat_data.gdat_params;
+ if isfield(params_eff,'cxrs_plot') && params_eff.cxrs_plot>0
+ cxrs_plot = params_eff.cxrs_plot;
+ else
+ cxrs_plot = 0;
+ end
+ gdat_data.gdat_params.cxrs_plot = cxrs_plot;
+ if isfield(params_eff,'source') && ~isempty(params_eff.source)
+ source = params_eff.source;
+ else
+ source = [1 2 3];
+ end
+ gdat_data.gdat_params.source = source;
+ if isfield(params_eff,'time_interval') && ~isempty(params_eff.time_interval) && length(params_eff.time_interval)>=2
+ time_interval = params_eff.time_interval;
+ cxrs_plot=1;
+ else
+ time_interval = [];
+ end
+ gdat_data.gdat_params.time_interval = time_interval;
+ gdat_data.gdat_params.cxrs_plot = cxrs_plot;
+ fit_tension_default = -100.;
+ if isfield(params_eff,'fit_tension')
+ fit_tension = params_eff.fit_tension;
+ else
+ fit_tension = fit_tension_default;
+ end
+ if ~isstruct(fit_tension)
+ fit_tension_eff.ti = fit_tension;
+ fit_tension_eff.vi = fit_tension;
+ fit_tension_eff.ni = fit_tension;
+ fit_tension_eff.zeff = fit_tension;
+ fit_tension = fit_tension_eff;
+ else
+ if ~isfield(fit_tension,'ti'); fit_tension.ti = fit_tension_default; end
+ if ~isfield(fit_tension,'vi'); fit_tension.vi = fit_tension_default; end
+ if ~isfield(fit_tension,'ni') && ~isfield(fit_tension,'nc'); fit_tension.ni = fit_tension_default; end
+ if ~isfield(fit_tension,'zeff'); fit_tension.zeff = fit_tension_default; end
+ end
+ gdat_data.gdat_params.fit_tension = fit_tension;
+ cxrs_params.prof.Ti.taus = fit_tension.ti;
+ cxrs_params.prof.vi.taus = fit_tension.vi;
+ cxrs_params.prof.nc.taus = fit_tension.ni;
+ cxrs_params.prof.zeff.taus = fit_tension.zeff;
+ cxrs_params.k_plot = cxrs_plot;
+ cxrs_profiles = CXRS_get_profiles(shot,source,time_interval,cxrs_params);
+ inb_times = length(cxrs_profiles.Times);
+ gdat_data.cxrs_params = cxrs_profiles.param;
+ if isempty(cxrs_profiles.Times) || ~isfield(cxrs_profiles,'proffit')
+ if (gdat_params.nverbose>=1); warning(['problems loading data with CXRS_get_profiles for data_request= ' data_request_eff]); end
+ for i=1:length(sub_nodes)
+ sub_eff_out = sub_nodes_out{i};
+ gdat_data.(sub_eff_out).fit.data = [];
+ gdat_data.(sub_eff_out).fit.rho = [];
+ gdat_data.(sub_eff_out).fit.error_bar = [];
+ gdat_data.(sub_eff_out).raw.data = [];
+ gdat_data.(sub_eff_out).raw.rho = [];
+ gdat_data.(sub_eff_out).raw.error_bar = [];
+ gdat_data.(sub_eff_out).raw.error_bar_rho = [];
+ gdat_data.(sub_eff_out).raw.cxrs_system = [];
+ gdat_data.time_interval = [];
+ gdat_data.(sub_eff_out).units = sub_nodes_units{i};
+ if i==1
+ gdat_data.data = gdat_data.(sub_eff_out).fit.data;
+ gdat_data.x = gdat_data.(sub_eff_out).fit.rho;
+ gdat_data.error_bar = gdat_data.(sub_eff_out).fit.error_bar;
+ gdat_data.units = gdat_data.(sub_eff_out).units;
+ end
+ end
+ return
+ end
+ inb_channels =120; % need to change if gets bigger!!! but easier to prefill with NaNs and use the "use" part
for i=1:length(sub_nodes)
+ sub_eff = sub_nodes{i};
sub_eff_out = sub_nodes_out{i};
- gdat_data.(sub_eff_out).fit.data = [];
- gdat_data.(sub_eff_out).fit.rho = [];
- gdat_data.(sub_eff_out).fit.error_bar = [];
- gdat_data.(sub_eff_out).raw.data = [];
- gdat_data.(sub_eff_out).raw.rho = [];
- gdat_data.(sub_eff_out).raw.error_bar = [];
- gdat_data.(sub_eff_out).raw.error_bar_rho = [];
- gdat_data.(sub_eff_out).raw.cxrs_system = [];
+ % fits
+ if isfield(cxrs_profiles.proffit,sub_eff)
+ gdat_data.(sub_eff_out).fit.data = cxrs_profiles.proffit.(sub_eff);
+ gdat_data.(sub_eff_out).fit.rho = cxrs_profiles.proffit.([sub_eff '_rho']);
+ gdat_data.(sub_eff_out).fit.error_bar = cxrs_profiles.proffit.(['d' sub_eff]);
+ else
+ gdat_data.(sub_eff_out).fit.data = [];
+ gdat_data.(sub_eff_out).fit.rho = [];
+ gdat_data.(sub_eff_out).fit.error_bar = [];
+ end
+ % raw data (use all data so keep same size)
+ gdat_data.(sub_eff_out).raw.data = NaN * ones(inb_channels,inb_times);
+ gdat_data.(sub_eff_out).raw.rho = NaN * ones(inb_channels,inb_times);
+ gdat_data.(sub_eff_out).raw.error_bar = NaN * ones(inb_channels,inb_times);
+ gdat_data.(sub_eff_out).raw.error_bar_rho = NaN * ones(inb_channels,inb_times);
+ gdat_data.(sub_eff_out).raw.cxrs_system = NaN * ones(inb_channels,inb_times);
gdat_data.time_interval = [];
+ for it=1:inb_times
+ if isfield(cxrs_profiles,sub_eff)
+ nb_raw_points = length(cxrs_profiles.(sub_eff){it}.use.y);
+ gdat_data.(sub_eff_out).raw.data(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.y;
+ gdat_data.(sub_eff_out).raw.rho(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.x;
+ gdat_data.(sub_eff_out).raw.error_bar(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.dy;
+ gdat_data.(sub_eff_out).raw.error_bar_rho(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.dx;
+ gdat_data.(sub_eff_out).raw.cxrs_system(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.sys;
+ gdat_data.time_interval{it} = cxrs_profiles.(sub_eff){it}.t_lim;
+ end
+ end
gdat_data.(sub_eff_out).units = sub_nodes_units{i};
if i==1
gdat_data.data = gdat_data.(sub_eff_out).fit.data;
@@ -483,557 +525,515 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
gdat_data.units = gdat_data.(sub_eff_out).units;
end
end
- return
- end
- inb_channels =120; % need to change if gets bigger!!! but easier to prefill with NaNs and use the "use" part
- for i=1:length(sub_nodes)
- sub_eff = sub_nodes{i};
- sub_eff_out = sub_nodes_out{i};
- % fits
- if isfield(cxrs_profiles.proffit,sub_eff)
- gdat_data.(sub_eff_out).fit.data = cxrs_profiles.proffit.(sub_eff);
- gdat_data.(sub_eff_out).fit.rho = cxrs_profiles.proffit.([sub_eff '_rho']);
- gdat_data.(sub_eff_out).fit.error_bar = cxrs_profiles.proffit.(['d' sub_eff]);
+ gdat_data.t = cxrs_profiles.proffit.time;
+ gdat_data.dim = {gdat_data.x; gdat_data.t};
+ if isempty(time_interval)
+ gdat_data.data_fullpath=['CXRS_get_profiles(' num2str(shot) ',[1 2 3],[],cxrs_params); % with cxrs_params'];
else
- gdat_data.(sub_eff_out).fit.data = [];
- gdat_data.(sub_eff_out).fit.rho = [];
- gdat_data.(sub_eff_out).fit.error_bar = [];
- end
- % raw data (use all data so keep same size)
- gdat_data.(sub_eff_out).raw.data = NaN * ones(inb_channels,inb_times);
- gdat_data.(sub_eff_out).raw.rho = NaN * ones(inb_channels,inb_times);
- gdat_data.(sub_eff_out).raw.error_bar = NaN * ones(inb_channels,inb_times);
- gdat_data.(sub_eff_out).raw.error_bar_rho = NaN * ones(inb_channels,inb_times);
- gdat_data.(sub_eff_out).raw.cxrs_system = NaN * ones(inb_channels,inb_times);
- gdat_data.time_interval = [];
- for it=1:inb_times
- if isfield(cxrs_profiles,sub_eff)
- nb_raw_points = length(cxrs_profiles.(sub_eff){it}.use.y);
- gdat_data.(sub_eff_out).raw.data(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.y;
- gdat_data.(sub_eff_out).raw.rho(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.x;
- gdat_data.(sub_eff_out).raw.error_bar(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.dy;
- gdat_data.(sub_eff_out).raw.error_bar_rho(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.dx;
- gdat_data.(sub_eff_out).raw.cxrs_system(1:nb_raw_points,it) = cxrs_profiles.(sub_eff){it}.use.sys;
- gdat_data.time_interval{it} = cxrs_profiles.(sub_eff){it}.t_lim;
- end
+ gdat_data.data_fullpath=['CXRS_get_profiles(' num2str(shot) ',[1 2 3],[' num2str(time_interval) '],cxrs_params); % with cxrs_params'];
end
- gdat_data.(sub_eff_out).units = sub_nodes_units{i};
- if i==1
- gdat_data.data = gdat_data.(sub_eff_out).fit.data;
- gdat_data.x = gdat_data.(sub_eff_out).fit.rho;
- gdat_data.error_bar = gdat_data.(sub_eff_out).fit.error_bar;
- gdat_data.units = gdat_data.(sub_eff_out).units;
- end
- end
- gdat_data.t = cxrs_profiles.proffit.time;
- gdat_data.dim = {gdat_data.x; gdat_data.t};
- if isempty(time_interval)
- gdat_data.data_fullpath=['CXRS_get_profiles(' num2str(shot) ',[1 2 3],[],cxrs_params); % with cxrs_params'];
- else
- gdat_data.data_fullpath=['CXRS_get_profiles(' num2str(shot) ',[1 2 3],[' num2str(time_interval) '],cxrs_params); % with cxrs_params'];
- end
- gdat_data.dimunits{1} = '';
- gdat_data.dimunits{2} = 's';
+ gdat_data.dimunits{1} = '';
+ gdat_data.dimunits{2} = 's';
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'ece', 'eced', 'ece_rho', 'eced_rho'}
- params_eff = gdat_data.gdat_params;
- channel_index = [1 96];
- if ~isfield(params_eff,'channel_index') || isempty(params_eff.channel_index)
- params_eff.channel_index = channel_index;
- else
- channel_index = params_eff.channel_index;
- end
- channel_index_list = channel_index;
- if numel(channel_index) == 2; channel_index_list=[channel_index(1):channel_index(2)]; end
- if isfield(params_eff,'time_interval') && ~isempty(params_eff.time_interval) && length(params_eff.time_interval)>=2
- time_interval = params_eff.time_interval;
- else
- time_interval = [];
- end
- gdat_data.gdat_params.time_interval = time_interval;
- fit_tension_default = -3.;
- if isfield(params_eff,'fit_tension')
- fit_tension = params_eff.fit_tension;
- else
- fit_tension = fit_tension_default;
- end
- i = channel_index_list(1);
- aa.data = [];
- for i=channel_index_list(2:end)
- if isempty(aa.data)
- params_eff.data_request = {'ppf','kk3',num2str(i,'te%.2d')};
- aa = gdat_jet(shot,params_eff);
- if ~isempty(aa.data)
- aa_data_start(i,:) = reshape(aa.data,1,numel(aa.data));
- aa.data = aa_data_start;
- params_eff.data_request = {'ppf','kk3',num2str(i,'rc%.2d')};
- gdat_data.rc = gdat_jet(shot,params_eff);
- rc_data(i,:) = reshape(gdat_data.rc.data,1,numel(gdat_data.rc.data));
- gdat_data.rc.data = rc_data;
- end
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'ece', 'eced', 'ece_rho', 'eced_rho'}
+ params_eff = gdat_data.gdat_params;
+ channel_index = [1 96];
+ if ~isfield(params_eff,'channel_index') || isempty(params_eff.channel_index)
+ params_eff.channel_index = channel_index;
else
- % assume same time for all
- % mds_dir = '/home/amerle/public/mds-ssh';
- mds_dir = '/home/amerle/public/mds-ssh3';
- if exist(mds_dir,'dir') && ~strcmp(which('mdsipmex'),fullfile(mds_dir,'mdsipmex.mexa64'))
- addpath(mds_dir);
- end
- mdsconnect(['ssh://' gdat_params.jet_user '@mdsplus.jetdata.eu']);
- if exist(mds_dir,'dir') && ~strcmp(which('mdsipmex'),fullfile(mds_dir,'mdsipmex.mexa64'))
- rmpath(mds_dir);
- end
- rda_data_request = ['ppf/kk3/' num2str(i,'te%.2d')];
- bb = mdsvalue(['_bb=jet("' rda_data_request '",' num2str(shot) ')']);
- if ~isempty(bb) && numel(bb)==size(aa.data,2)
- aa.data(i,:) = bb;
- end
- rda_data_request = ['ppf/kk3/' num2str(i,'rc%.2d')];
- bb = mdsvalue(['_bb=jet("' rda_data_request '",' num2str(shot) ')']);
- if ~isempty(bb) && numel(bb)==size(gdat_data.rc.data,2)
- gdat_data.rc.data(i,:) = bb;
+ channel_index = params_eff.channel_index;
+ end
+ channel_index_list = channel_index;
+ if numel(channel_index) == 2; channel_index_list=[channel_index(1):channel_index(2)]; end
+ if isfield(params_eff,'time_interval') && ~isempty(params_eff.time_interval) && length(params_eff.time_interval)>=2
+ time_interval = params_eff.time_interval;
+ else
+ time_interval = [];
+ end
+ gdat_data.gdat_params.time_interval = time_interval;
+ fit_tension_default = -3.;
+ if isfield(params_eff,'fit_tension')
+ fit_tension = params_eff.fit_tension;
+ else
+ fit_tension = fit_tension_default;
+ end
+ i = channel_index_list(1);
+ aa.data = [];
+ for i=channel_index_list(2:end)
+ if isempty(aa.data)
+ params_eff.data_request = {'ppf','kk3',num2str(i,'te%.2d')};
+ aa = gdat_jet(shot,params_eff);
+ if ~isempty(aa.data)
+ aa_data_start(i,:) = reshape(aa.data,1,numel(aa.data));
+ aa.data = aa_data_start;
+ params_eff.data_request = {'ppf','kk3',num2str(i,'rc%.2d')};
+ gdat_data.rc = gdat_jet(shot,params_eff);
+ rc_data(i,:) = reshape(gdat_data.rc.data,1,numel(gdat_data.rc.data));
+ gdat_data.rc.data = rc_data;
+ end
+ else
+ % assume same time for all
+ % mds_dir = '/home/amerle/public/mds-ssh';
+ mds_dir = '/home/amerle/public/mds-ssh3';
+ if exist(mds_dir,'dir') && ~strcmp(which('mdsipmex'),fullfile(mds_dir,'mdsipmex.mexa64'))
+ addpath(mds_dir);
+ end
+ mdsconnect(['ssh://' gdat_params.jet_user '@mdsplus.jetdata.eu']);
+ if exist(mds_dir,'dir') && ~strcmp(which('mdsipmex'),fullfile(mds_dir,'mdsipmex.mexa64'))
+ rmpath(mds_dir);
+ end
+ rda_data_request = ['ppf/kk3/' num2str(i,'te%.2d')];
+ bb = mdsvalue(['_bb=jet("' rda_data_request '",' num2str(shot) ')']);
+ if ~isempty(bb) && numel(bb)==size(aa.data,2)
+ aa.data(i,:) = bb;
+ end
+ rda_data_request = ['ppf/kk3/' num2str(i,'rc%.2d')];
+ bb = mdsvalue(['_bb=jet("' rda_data_request '",' num2str(shot) ')']);
+ if ~isempty(bb) && numel(bb)==size(gdat_data.rc.data,2)
+ gdat_data.rc.data(i,:) = bb;
+ end
end
end
- end
- gdat_data.data = aa.data;
- gdat_data.t = aa.t;
- gdat_data.units = 'eV';
- gdat_data.dim{1} = channel_index_list;
- gdat_data.dim{2} = gdat_data.t;
- gdat_data.x = gdat_data.dim{1};
- gdat_data.dimunits{1} = 'xx';
- gdat_data.dimunits{2} = 's';
- gdat_data.data_fullpath = aa.data_fullpath;
- gdat_data.label = aa.label;
- gdat_data.help = 'using jet() call for other data channels to avoid loading t many times';
- gdat_data.rc.units = 'm';
- gdat_data.rc.dim{1} = channel_index_list;
- gdat_data.rc.dim{2} = gdat_data.rc.t;
- gdat_data.rc.x = gdat_data.rc.dim{1};
- gdat_data.rc.dimunits{1} = 'xx';
- gdat_data.rc.dimunits{2} = 's';
+ gdat_data.data = aa.data;
+ gdat_data.t = aa.t;
+ gdat_data.units = 'eV';
+ gdat_data.dim{1} = channel_index_list;
+ gdat_data.dim{2} = gdat_data.t;
+ gdat_data.x = gdat_data.dim{1};
+ gdat_data.dimunits{1} = 'xx';
+ gdat_data.dimunits{2} = 's';
+ gdat_data.data_fullpath = aa.data_fullpath;
+ gdat_data.label = aa.label;
+ gdat_data.help = 'using jet() call for other data channels to avoid loading t many times';
+ gdat_data.rc.units = 'm';
+ gdat_data.rc.dim{1} = channel_index_list;
+ gdat_data.rc.dim{2} = gdat_data.rc.t;
+ gdat_data.rc.x = gdat_data.rc.dim{1};
+ gdat_data.rc.dimunits{1} = 'xx';
+ gdat_data.rc.dimunits{2} = 's';
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'eqdsk'}
- %
- time=1.; % default time
- if isfield(gdat_data.gdat_params,'time') && ~isempty(gdat_data.gdat_params.time)
- time = gdat_data.gdat_params.time;
- else
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'eqdsk'}
+ %
+ time=1.; % default time
+ if isfield(gdat_data.gdat_params,'time') && ~isempty(gdat_data.gdat_params.time)
+ time = gdat_data.gdat_params.time;
+ else
+ gdat_data.gdat_params.time = time;
+ if (gdat_params.nverbose>=3); disp(['"time" is expected as an option, choose default time = ' num2str(time)]); end
+ end
gdat_data.gdat_params.time = time;
- if (gdat_params.nverbose>=3); disp(['"time" is expected as an option, choose default time = ' num2str(time)]); end
- end
- gdat_data.gdat_params.time = time;
- gdat_data.t = time;
- zshift = 0.;
- if isfield(gdat_data.gdat_params,'zshift') && ~isempty(gdat_data.gdat_params.zshift)
- zshift = gdat_data.gdat_params.zshift;
- else
- gdat_data.gdat_params.zshift = zshift;
- end
- if abs(zshift-1) <= 1e-6
- zshift_eff = -99;
- else
- zshift_eff = zshift;
- end
- if ~isfield(gdat_data.gdat_params,'nr') || isempty(gdat_data.gdat_params.nr)
- gdat_data.gdat_params.nr = 129;
- end
- if ~isfield(gdat_data.gdat_params,'nz') || isempty(gdat_data.gdat_params.nz)
- gdat_data.gdat_params.nz = 129;
- end
- [efitdata,eqd]=geteqdskJET(shot,time,gdat_data.gdat_params.nr,gdat_data.gdat_params.nz,[],zshift_eff,[],[],[],100,[],gdat_data.gdat_params.jet_user);
- if length(time) > 1
- gdat_data.eqdsk = eqd;
- for itime=1:length(time)
- if itime==1
- gdat_data.data(:,:,itime) = gdat_data.eqdsk{itime}.psi;
- gdat_data.dim{1} = gdat_data.eqdsk{itime}.rmesh;
- gdat_data.dim{2} = gdat_data.eqdsk{itime}.zmesh;
- else
- % for several times, use array of structure for eqdsks,
- % cannot use it for psi(R,Z) in .data and .x since R, Z might be different at different times,
- % so project psi(R,Z) on Rmesh, Zmesh of 1st time
- xx=repmat(reshape(gdat_data.dim{1},length(gdat_data.dim{1}),1),1,size(gdat_data.eqdsk{itime}.psi,2));
- yy=repmat(reshape(gdat_data.dim{2},1,length(gdat_data.dim{2})),size(gdat_data.eqdsk{itime}.psi,1),1);
- aa = interpos2Dcartesian(gdat_data.eqdsk{itime}.rmesh,gdat_data.eqdsk{itime}.zmesh ...
- ,gdat_data.eqdsk{itime}.psi,xx,yy,-1,-1);
- gdat_data.data(:,:,itime) = aa;
+ gdat_data.t = time;
+ zshift = 0.;
+ if isfield(gdat_data.gdat_params,'zshift') && ~isempty(gdat_data.gdat_params.zshift)
+ zshift = gdat_data.gdat_params.zshift;
+ else
+ gdat_data.gdat_params.zshift = zshift;
+ end
+ if abs(zshift-1) <= 1e-6
+ zshift_eff = -99;
+ else
+ zshift_eff = zshift;
+ end
+ if ~isfield(gdat_data.gdat_params,'nr') || isempty(gdat_data.gdat_params.nr)
+ gdat_data.gdat_params.nr = 129;
+ end
+ if ~isfield(gdat_data.gdat_params,'nz') || isempty(gdat_data.gdat_params.nz)
+ gdat_data.gdat_params.nz = 129;
+ end
+ [efitdata,eqd]=geteqdskJET(shot,time,gdat_data.gdat_params.nr,gdat_data.gdat_params.nz,[],zshift_eff,[],[],[],100,[],gdat_data.gdat_params.jet_user);
+ if length(time) > 1
+ gdat_data.eqdsk = eqd;
+ for itime=1:length(time)
+ if itime==1
+ gdat_data.data(:,:,itime) = gdat_data.eqdsk{itime}.psi;
+ gdat_data.dim{1} = gdat_data.eqdsk{itime}.rmesh;
+ gdat_data.dim{2} = gdat_data.eqdsk{itime}.zmesh;
+ else
+ % for several times, use array of structure for eqdsks,
+ % cannot use it for psi(R,Z) in .data and .x since R, Z might be different at different times,
+ % so project psi(R,Z) on Rmesh, Zmesh of 1st time
+ xx=repmat(reshape(gdat_data.dim{1},length(gdat_data.dim{1}),1),1,size(gdat_data.eqdsk{itime}.psi,2));
+ yy=repmat(reshape(gdat_data.dim{2},1,length(gdat_data.dim{2})),size(gdat_data.eqdsk{itime}.psi,1),1);
+ aa = interpos2Dcartesian(gdat_data.eqdsk{itime}.rmesh,gdat_data.eqdsk{itime}.zmesh ...
+ ,gdat_data.eqdsk{itime}.psi,xx,yy,-1,-1);
+ gdat_data.data(:,:,itime) = aa;
+ end
end
+ else
+ gdat_data.eqdsk = eqd{1};
+ gdat_data.data = gdat_data.eqdsk.psi;
+ gdat_data.dim{1} = gdat_data.eqdsk.rmesh;
+ gdat_data.dim{2} = gdat_data.eqdsk.zmesh;
end
- else
- gdat_data.eqdsk = eqd{1};
- gdat_data.data = gdat_data.eqdsk.psi;
- gdat_data.dim{1} = gdat_data.eqdsk.rmesh;
- gdat_data.dim{2} = gdat_data.eqdsk.zmesh;
- end
- gdat_data.dim{3} = gdat_data.t;
- gdat_data.x = gdat_data.dim(1:2);
- gdat_data.data_fullpath=['psi(R,Z) and eqdsk from geteqdskJET from efit ; zshift=' num2str(zshift)];
- gdat_data.units = 'T m^2';
- gdat_data.dimunits = {'m','m','s'};
- gdat_data.request_description = ['data=psi, x=(R,Z), eqdsk contains eqdsk structure with which ' ...
+ gdat_data.dim{3} = gdat_data.t;
+ gdat_data.x = gdat_data.dim(1:2);
+ gdat_data.data_fullpath=['psi(R,Z) and eqdsk from geteqdskJET from efit ; zshift=' num2str(zshift)];
+ gdat_data.units = 'T m^2';
+ gdat_data.dimunits = {'m','m','s'};
+ gdat_data.request_description = ['data=psi, x=(R,Z), eqdsk contains eqdsk structure with which ' ...
'plot_eqdsk, write_eqdsk, read_eqdsk can be used'];
- % data loaded to create eqdsks, can be used in geteqdskJET for other times to avoid to reload all
- gdat_data.efitdata = efitdata;
+ % data loaded to create eqdsks, can be used in geteqdskJET for other times to avoid to reload all
+ gdat_data.efitdata = efitdata;
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'mhd'}
- params_eff = gdat_data.gdat_params;
- if ~isfield(params_eff,'nfft') || isempty(params_eff.nfft)
- params_eff.nfft = 4096;
- end
- gdat_data.gdat_params = params_eff;
- params_eff.data_request={'JPF','DA','C1M-H305'};
- gdat_tmp = gdat_jet(shot,params_eff);
- gdat_data.sig1.data = reshape(gdat_tmp.data,length(gdat_tmp.data),1 );
- gdat_data.t = gdat_tmp.t;
- gdat_data.dim{1} = gdat_data.t;
- gdat_data.dim{2} = [1 2];
- gdat_data.dimunits = {'s', 'odd/even'};
- gdat_data.x = gdat_data.dim{2};
- gdat_data.sig1.data_request = params_eff.data_request;
- % other coil 180deg apart toroidally
- params_eff.data_request = {'JPF','DA','C1M-T009'};
- gdat_tmp=gdat_jet(shot,params_eff);
- gdat_data.sig2.data = reshape(gdat_tmp.data,length(gdat_tmp.data),1);
- gdat_data.sig2.data_request=params_eff.data_request;
- gdat_data.label={'n=odd','n=even'};
- gdat_data.full_path='n=1 in data(:,1) and .sig1; .sig2';
- gdat_data.units = 'T/s';
- gdat_data.label = {'n=odd','n=even'}; % can be used in legend(gdat_data.label)
- %
- if ~isempty(gdat_data.sig1.data) && ~isempty(gdat_data.sig2.data)
- gdat_data.data(:,1) = (gdat_data.sig1.data - gdat_data.sig2.data)./2;
- gdat_data.data(:,2) = (gdat_data.sig1.data + gdat_data.sig2.data)./2;
- end
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'mhd'}
+ params_eff = gdat_data.gdat_params;
+ if ~isfield(params_eff,'nfft') || isempty(params_eff.nfft)
+ params_eff.nfft = 4096;
+ end
+ gdat_data.gdat_params = params_eff;
+ params_eff.data_request={'JPF','DA','C1M-H305'};
+ gdat_tmp = gdat_jet(shot,params_eff);
+ gdat_data.sig1.data = reshape(gdat_tmp.data,length(gdat_tmp.data),1 );
+ gdat_data.t = gdat_tmp.t;
+ gdat_data.dim{1} = gdat_data.t;
+ gdat_data.dim{2} = [1 2];
+ gdat_data.dimunits = {'s', 'odd/even'};
+ gdat_data.x = gdat_data.dim{2};
+ gdat_data.sig1.data_request = params_eff.data_request;
+ % other coil 180deg apart toroidally
+ params_eff.data_request = {'JPF','DA','C1M-T009'};
+ gdat_tmp=gdat_jet(shot,params_eff);
+ gdat_data.sig2.data = reshape(gdat_tmp.data,length(gdat_tmp.data),1);
+ gdat_data.sig2.data_request=params_eff.data_request;
+ gdat_data.label={'n=odd','n=even'};
+ gdat_data.full_path='n=1 in data(:,1) and .sig1; .sig2';
+ gdat_data.units = 'T/s';
+ gdat_data.label = {'n=odd','n=even'}; % can be used in legend(gdat_data.label)
+ %
+ if ~isempty(gdat_data.sig1.data) && ~isempty(gdat_data.sig2.data)
+ gdat_data.data(:,1) = (gdat_data.sig1.data - gdat_data.sig2.data)./2;
+ gdat_data.data(:,2) = (gdat_data.sig1.data + gdat_data.sig2.data)./2;
+ end
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'ne','te', 'nete'}
- nodenameeff_rho = 'rho';
- if ~isfield(gdat_data.gdat_params,'fit') || isempty(gdat_data.gdat_params.fit) || ~isnumeric(gdat_data.gdat_params.fit)
- gdat_data.gdat_params.fit = 1; % default do fit
- end
- if isfield(gdat_data.gdat_params,'source') && ~isempty(gdat_data.gdat_params.source)
- if strcmp(lower(gdat_data.gdat_params.source),'chain2')
- gdat_data.gdat_params.source = 'hrt2';
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'ne','te', 'nete'}
+ nodenameeff_rho = 'rho';
+ if ~isfield(gdat_data.gdat_params,'fit') || isempty(gdat_data.gdat_params.fit) || ~isnumeric(gdat_data.gdat_params.fit)
+ gdat_data.gdat_params.fit = 1; % default do fit
end
- if strcmp(lower(gdat_data.gdat_params.source),'hrt2')
- nodenameeff_rho = []; % profiles already on rho
- gdat_data.gdat_params.fit = 0; % no need, chain2 is already a fit on rhopol
+ if isfield(gdat_data.gdat_params,'source') && ~isempty(gdat_data.gdat_params.source)
+ if strcmp(lower(gdat_data.gdat_params.source),'chain2')
+ gdat_data.gdat_params.source = 'hrt2';
+ end
+ if strcmp(lower(gdat_data.gdat_params.source),'hrt2')
+ nodenameeff_rho = []; % profiles already on rho
+ gdat_data.gdat_params.fit = 0; % no need, chain2 is already a fit on rhopol
+ end
+ else
+ gdat_data.gdat_params.source = 'hrts';
end
- else
- gdat_data.gdat_params.source = 'hrts';
- end
- if ~isfield(gdat_data.gdat_params,'fit_ne_edge') || isempty(gdat_data.gdat_params.fit_ne_edge) || ~isnumeric(gdat_data.gdat_params.fit_ne_edge)
- gdat_data.gdat_params.fit_ne_edge = 1e18; % default edge ne value (-1 to let free)
- end
- if ~isfield(gdat_data.gdat_params,'fit_te_edge') || isempty(gdat_data.gdat_params.fit_te_edge) || ~isnumeric(gdat_data.gdat_params.fit_te_edge)
- gdat_data.gdat_params.fit_te_edge = 50; % default edge te value (-1 to let free)
- end
- params_eff = gdat_data.gdat_params;
- params_eff.doplot = 0;
- % ne and/or Te from Thomson data on raw z mesh vs (z,t)
- data_request_effi{1} = data_request_eff;
- if strcmp(data_request_eff,'nete')
- data_request_effi{1} = 'ne'; % start with ne
- data_request_effi{2} = 'te';
- else
- data_request_effi{2} = [];
- end
- params_eff.data_request = {'ppf',params_eff.source,data_request_effi{1}};
- aa = gdat_jet(shot,params_eff);
- if isempty(aa.data) || isempty(aa.t)
- if gdat_params.nverbose>=3;
- aa
- disp(['with data_request= ' data_request_eff])
+ if ~isfield(gdat_data.gdat_params,'fit_ne_edge') || isempty(gdat_data.gdat_params.fit_ne_edge) || ~isnumeric(gdat_data.gdat_params.fit_ne_edge)
+ gdat_data.gdat_params.fit_ne_edge = 1e18; % default edge ne value (-1 to let free)
end
- return
- end
- gdat_data.data = aa.data;
- gdat_data.dim = aa.dim;
- gdat_data.t = aa.dim{2};
- gdat_data.x = aa.dim{1};
- gdat_data.dimunits=[{'R [m]'} ; {'time [s]'}];
- gdat_data.data_fullpath=[data_request_eff ' from ' params_eff.source];
- gdat_data.(data_request_effi{1}).data = aa.data;
- gdat_data.(data_request_effi{1}).t = aa.t;
- gdat_data.(data_request_effi{1}).r = aa.x;
- if any(strcmp(fieldnames(aa),'units')) && ~isempty(aa.units)
- gdat_data.units=aa.units;
- else
- if strcmp(data_request_effi{1},'ne')
- gdat_data.units = 'm^{-3}';
- elseif strcmp(data_request_effi{1},'te')
- gdat_data.units = 'eV';
+ if ~isfield(gdat_data.gdat_params,'fit_te_edge') || isempty(gdat_data.gdat_params.fit_te_edge) || ~isnumeric(gdat_data.gdat_params.fit_te_edge)
+ gdat_data.gdat_params.fit_te_edge = 50; % default edge te value (-1 to let free)
end
- end
- params_eff.data_request = {'ppf',params_eff.source,['d' data_request_effi{1}]};
- aaerr = gdat_jet(shot,params_eff);
- gdat_data.error_bar = aaerr.data;
- gdat_data.(data_request_effi{1}).error_bar = aaerr.data;
- if ~isempty(nodenameeff_rho)
- params_eff.data_request = {'ppf',params_eff.source,'rho'};
- aarho = gdat_jet(shot,params_eff);
- gdat_data.rhopol = abs(aarho.data);
- gdat_data.(data_request_effi{1}).rhopol = abs(aarho.data); % keep rho >0
- gdat_data.(data_request_effi{1}).rhopol_sign = aarho.data; % to be able to distinguish channels
- else
- gdat_data.rhopol = gdat_data.x;
- gdat_data.(data_request_effi{1}).rhopol = gdat_data.x;
- gdat_data.dimunits{1} = 'rhopol';
- end
- if length(gdat_data.x) == numel(gdat_data.rhopol)
- % gdat_data.x is already rhopol and 1D
- gdat_data = get_grids_1d(gdat_data,1,1,gdat_params.nverbose);
- else
- aa=gdat_data; aa.x = aa.rhopol;
- gdat_data2 = get_grids_1d(aa,2,1,gdat_params.nverbose);
- gdat_data.grids_1d = gdat_data2.grids_1d;
- clear aa gdat_data2
- end
- % load te if 'nete' was asked
- if ~isempty(data_request_effi{2})
- params_eff.data_request = {'ppf',params_eff.source,data_request_effi{2}};
+ params_eff = gdat_data.gdat_params;
+ params_eff.doplot = 0;
+ % ne and/or Te from Thomson data on raw z mesh vs (z,t)
+ data_request_effi{1} = data_request_eff;
+ if strcmp(data_request_eff,'nete')
+ data_request_effi{1} = 'ne'; % start with ne
+ data_request_effi{2} = 'te';
+ else
+ data_request_effi{2} = [];
+ end
+ params_eff.data_request = {'ppf',params_eff.source,data_request_effi{1}};
aa = gdat_jet(shot,params_eff);
if isempty(aa.data) || isempty(aa.t)
if gdat_params.nverbose>=3;
aa
- disp(['with data_request= ' data_request_effi{2}])
+ disp(['with data_request= ' data_request_eff])
end
return
end
- gdat_data.(data_request_effi{2}).data = aa.data;
- gdat_data.(data_request_effi{2}).t = aa.t;
- gdat_data.(data_request_effi{2}).r = aa.x;
+ gdat_data.data = aa.data;
+ gdat_data.dim = aa.dim;
+ gdat_data.t = aa.dim{2};
+ gdat_data.x = aa.dim{1};
+ gdat_data.dimunits=[{'R [m]'} ; {'time [s]'}];
+ gdat_data.data_fullpath=[data_request_eff ' from ' params_eff.source];
+ gdat_data.(data_request_effi{1}).data = aa.data;
+ gdat_data.(data_request_effi{1}).t = aa.t;
+ gdat_data.(data_request_effi{1}).r = aa.x;
if any(strcmp(fieldnames(aa),'units')) && ~isempty(aa.units)
- gdat_data.(data_request_effi{2}).units=aa.units;
+ gdat_data.units=aa.units;
else
- if strcmp(data_request_effi{2},'ne')
- gdat_data.(data_request_effi{2}).units = 'm^{-3}';
- elseif strcmp(data_request_effi{2},'te')
- gdat_data.(data_request_effi{2}).units = 'eV';
+ if strcmp(data_request_effi{1},'ne')
+ gdat_data.units = 'm^{-3}';
+ elseif strcmp(data_request_effi{1},'te')
+ gdat_data.units = 'eV';
end
end
- params_eff.data_request = {'ppf',params_eff.source,['d' data_request_effi{2}]};
+ params_eff.data_request = {'ppf',params_eff.source,['d' data_request_effi{1}]};
aaerr = gdat_jet(shot,params_eff);
- gdat_data.(data_request_effi{2}).error_bar = aaerr.data;
- gdat_data.(data_request_effi{2}).rhopol = gdat_data.(data_request_effi{1}).rhopol;
- gdat_data.(data_request_effi{2}).rhopol_sign = gdat_data.(data_request_effi{1}).rhopol_sign;
- % construct pressure in .data
- gdat_data.data = 1.602e-19.* gdat_data.(data_request_effi{1}).data .* gdat_data.(data_request_effi{2}).data;
- end
- % defaults for fits, so user always gets std structure
- gdat_data.fit.rhotornorm = []; % same for both ne and te
- gdat_data.fit.rhopolnorm = [];
- gdat_data.fit.t = [];
- gdat_data.fit.te.data = [];
- gdat_data.fit.te.d_over_drhotornorm = [];
- gdat_data.fit.ne.data = [];
- gdat_data.fit.ne.d_over_drhotornorm = [];
- gdat_data.fit.raw.te.data = [];
- gdat_data.fit.raw.te.rhopolnorm = [];
- gdat_data.fit.raw.ne.data = [];
- gdat_data.fit.raw.ne.rhopolnorm = [];
- fit_tension_default = -1;
- if isfield(gdat_data.gdat_params,'fit_tension')
- fit_tension = gdat_data.gdat_params.fit_tension;
- else
- fit_tension = fit_tension_default;
- end
- if ~isstruct(fit_tension)
- fit_tension_eff.te = fit_tension;
- fit_tension_eff.ne = fit_tension;
- fit_tension = fit_tension_eff;
- else
- if ~isfield(fit_tension,'te'); fit_tension.te = fit_tension_default; end
- if ~isfield(fit_tension,'ne '); fit_tension.ne = fit_tension_default; end
- end
- gdat_data.gdat_params.fit_tension = fit_tension;
- if isfield(gdat_data.gdat_params,'fit_nb_rho_points')
- fit_nb_rho_points = gdat_data.gdat_params.fit_nb_rho_points;
- else
- fit_nb_rho_points = 201;
- end
- gdat_data.gdat_params.fit_nb_rho_points = fit_nb_rho_points;
- if isfield(gdat_data.gdat_params,'fit_ne_min')
- fit_ne_min = gdat_data.gdat_params.fit_ne_min;
- else
- fit_ne_min = 1e17;
- end
- if isfield(gdat_data.gdat_params,'fit_te_min')
- fit_te_min = gdat_data.gdat_params.fit_te_min;
- else
- fit_te_min = 5;
- end
- gdat_data.gdat_params.fit_te_min = fit_te_min;
- fit_mask = -1; % we mask on the indices, thus -1 means no mask
- if isfield(gdat_data.gdat_params,'fit_mask') && isnumeric(gdat_data.gdat_params.fit_mask) ...
- && ~isempty(gdat_data.gdat_params.fit_mask)
- % channel index to mask
- fit_mask = gdat_data.gdat_params.fit_mask;
- else
- fit_mask = fit_mask;
- end
- gdat_data.gdat_params.fit_mask = fit_mask;
- gdat_data.fit.mask = fit_mask;
- %
- if gdat_data.gdat_params.fit==1
- % add fits
- gdat_data.fit.t = gdat_data.t;
- rhopolfit = linspace(0,1,fit_nb_rho_points)';
- gdat_data.fit.rhotornorm = NaN*ones(length(rhopolfit),length(gdat_data.fit.t));
- gdat_data.fit.rhopolnorm = rhopolfit;
- % common part between ne and te
- indices_ok=[1:size(gdat_data.data,1)]';
- indices_ok=setdiff(indices_ok,fit_mask);
- for it=1:length(gdat_data.t)
- % make rhopol->rhotor transformation for each time since equilibrium might have changed
- irhook=find(gdat_data.grids_1d.rhopolnorm(indices_ok,it)>0 & gdat_data.grids_1d.rhopolnorm(indices_ok,it)<1); % no need for ~isnan
- [rhoeff isort]=sort(gdat_data.grids_1d.rhopolnorm(indices_ok(irhook),it));
- gdat_data.fit.rhotornorm(:,it)=interpos([0; rhoeff; 1], ...
- [0; gdat_data.grids_1d.rhotornorm(indices_ok(irhook(isort)),it); 1],rhopolfit,-0.1,[2 2],[0 1]);
+ gdat_data.error_bar = aaerr.data;
+ gdat_data.(data_request_effi{1}).error_bar = aaerr.data;
+ if ~isempty(nodenameeff_rho)
+ params_eff.data_request = {'ppf',params_eff.source,'rho'};
+ aarho = gdat_jet(shot,params_eff);
+ gdat_data.rhopol = abs(aarho.data);
+ gdat_data.(data_request_effi{1}).rhopol = abs(aarho.data); % keep rho >0
+ gdat_data.(data_request_effi{1}).rhopol_sign = aarho.data; % to be able to distinguish channels
+ else
+ gdat_data.rhopol = gdat_data.x;
+ gdat_data.(data_request_effi{1}).rhopol = gdat_data.x;
+ gdat_data.dimunits{1} = 'rhopol';
+ end
+ if length(gdat_data.x) == numel(gdat_data.rhopol)
+ % gdat_data.x is already rhopol and 1D
+ gdat_data = get_grids_1d(gdat_data,1,1,gdat_params.nverbose);
+ else
+ aa=gdat_data; aa.x = aa.rhopol;
+ gdat_data2 = get_grids_1d(aa,2,1,gdat_params.nverbose);
+ gdat_data.grids_1d = gdat_data2.grids_1d;
+ clear aa gdat_data2
end
- for i=1:2
- if strcmp(data_request_effi{i},'te')
- gdat_data.fit.raw.te.data = NaN*ones(size(gdat_data.te.data));
- gdat_data.fit.raw.te.error_bar = NaN*ones(size(gdat_data.te.data));
- gdat_data.fit.raw.te.rhopolnorm = NaN*ones(size(gdat_data.te.data));
- gdat_data.fit.te.data = gdat_data.fit.rhotornorm;
- gdat_data.fit.te.d_over_drhotornorm = gdat_data.fit.rhotornorm;
- elseif strcmp(data_request_effi{i},'ne')
- gdat_data.fit.raw.ne.data = NaN*ones(size(gdat_data.ne.data));
- gdat_data.fit.raw.ne.error_bar = NaN*ones(size(gdat_data.ne.data));
- gdat_data.fit.raw.ne.rhopolnorm = NaN*ones(size(gdat_data.ne.data));
- gdat_data.fit.ne.data =gdat_data.fit.rhotornorm;
- gdat_data.fit.ne.d_over_drhotornorm = gdat_data.fit.rhotornorm;
+ % load te if 'nete' was asked
+ if ~isempty(data_request_effi{2})
+ params_eff.data_request = {'ppf',params_eff.source,data_request_effi{2}};
+ aa = gdat_jet(shot,params_eff);
+ if isempty(aa.data) || isempty(aa.t)
+ if gdat_params.nverbose>=3;
+ aa
+ disp(['with data_request= ' data_request_effi{2}])
+ end
+ return
+ end
+ gdat_data.(data_request_effi{2}).data = aa.data;
+ gdat_data.(data_request_effi{2}).t = aa.t;
+ gdat_data.(data_request_effi{2}).r = aa.x;
+ if any(strcmp(fieldnames(aa),'units')) && ~isempty(aa.units)
+ gdat_data.(data_request_effi{2}).units=aa.units;
+ else
+ if strcmp(data_request_effi{2},'ne')
+ gdat_data.(data_request_effi{2}).units = 'm^{-3}';
+ elseif strcmp(data_request_effi{2},'te')
+ gdat_data.(data_request_effi{2}).units = 'eV';
+ end
end
+ params_eff.data_request = {'ppf',params_eff.source,['d' data_request_effi{2}]};
+ aaerr = gdat_jet(shot,params_eff);
+ gdat_data.(data_request_effi{2}).error_bar = aaerr.data;
+ gdat_data.(data_request_effi{2}).rhopol = gdat_data.(data_request_effi{1}).rhopol;
+ gdat_data.(data_request_effi{2}).rhopol_sign = gdat_data.(data_request_effi{1}).rhopol_sign;
+ % construct pressure in .data
+ gdat_data.data = 1.602e-19.* gdat_data.(data_request_effi{1}).data .* gdat_data.(data_request_effi{2}).data;
+ end
+ % defaults for fits, so user always gets std structure
+ gdat_data.fit.rhotornorm = []; % same for both ne and te
+ gdat_data.fit.rhopolnorm = [];
+ gdat_data.fit.t = [];
+ gdat_data.fit.te.data = [];
+ gdat_data.fit.te.d_over_drhotornorm = [];
+ gdat_data.fit.ne.data = [];
+ gdat_data.fit.ne.d_over_drhotornorm = [];
+ gdat_data.fit.raw.te.data = [];
+ gdat_data.fit.raw.te.rhopolnorm = [];
+ gdat_data.fit.raw.ne.data = [];
+ gdat_data.fit.raw.ne.rhopolnorm = [];
+ fit_tension_default = -1;
+ if isfield(gdat_data.gdat_params,'fit_tension')
+ fit_tension = gdat_data.gdat_params.fit_tension;
+ else
+ fit_tension = fit_tension_default;
+ end
+ if ~isstruct(fit_tension)
+ fit_tension_eff.te = fit_tension;
+ fit_tension_eff.ne = fit_tension;
+ fit_tension = fit_tension_eff;
+ else
+ if ~isfield(fit_tension,'te'); fit_tension.te = fit_tension_default; end
+ if ~isfield(fit_tension,'ne '); fit_tension.ne = fit_tension_default; end
+ end
+ gdat_data.gdat_params.fit_tension = fit_tension;
+ if isfield(gdat_data.gdat_params,'fit_nb_rho_points')
+ fit_nb_rho_points = gdat_data.gdat_params.fit_nb_rho_points;
+ else
+ fit_nb_rho_points = 201;
+ end
+ gdat_data.gdat_params.fit_nb_rho_points = fit_nb_rho_points;
+ if isfield(gdat_data.gdat_params,'fit_ne_min')
+ fit_ne_min = gdat_data.gdat_params.fit_ne_min;
+ else
+ fit_ne_min = 1e17;
+ end
+ if isfield(gdat_data.gdat_params,'fit_te_min')
+ fit_te_min = gdat_data.gdat_params.fit_te_min;
+ else
+ fit_te_min = 5;
+ end
+ gdat_data.gdat_params.fit_te_min = fit_te_min;
+ fit_mask = -1; % we mask on the indices, thus -1 means no mask
+ if isfield(gdat_data.gdat_params,'fit_mask') && isnumeric(gdat_data.gdat_params.fit_mask) ...
+ && ~isempty(gdat_data.gdat_params.fit_mask)
+ % channel index to mask
+ fit_mask = gdat_data.gdat_params.fit_mask;
+ else
+ fit_mask = fit_mask;
+ end
+ gdat_data.gdat_params.fit_mask = fit_mask;
+ gdat_data.fit.mask = fit_mask;
+ %
+ if gdat_data.gdat_params.fit==1
+ % add fits
+ gdat_data.fit.t = gdat_data.t;
+ rhopolfit = linspace(0,1,fit_nb_rho_points)';
+ gdat_data.fit.rhotornorm = NaN*ones(length(rhopolfit),length(gdat_data.fit.t));
+ gdat_data.fit.rhopolnorm = rhopolfit;
+ % common part between ne and te
+ indices_ok=[1:size(gdat_data.data,1)]';
+ indices_ok=setdiff(indices_ok,fit_mask);
for it=1:length(gdat_data.t)
+ % make rhopol->rhotor transformation for each time since equilibrium might have changed
+ irhook=find(gdat_data.grids_1d.rhopolnorm(indices_ok,it)>0 & gdat_data.grids_1d.rhopolnorm(indices_ok,it)<1); % no need for ~isnan
+ [rhoeff isort]=sort(gdat_data.grids_1d.rhopolnorm(indices_ok(irhook),it));
+ gdat_data.fit.rhotornorm(:,it)=interpos([0; rhoeff; 1], ...
+ [0; gdat_data.grids_1d.rhotornorm(indices_ok(irhook(isort)),it); 1],rhopolfit,-0.1,[2 2],[0 1]);
+ end
+ for i=1:2
if strcmp(data_request_effi{i},'te')
- idatate = find(gdat_data.te.data(indices_ok,it)>1 & gdat_data.grids_1d.rhopolnorm(indices_ok,it)<=1.05);
- idatate = indices_ok(idatate);
- if length(idatate)>0
- gdat_data.fit.raw.te.rhopolnorm(idatate,it) = gdat_data.grids_1d.rhopolnorm(idatate,it);
- gdat_data.fit.raw.te.data(idatate,it) = gdat_data.te.data(idatate,it);
- gdat_data.fit.raw.te.error_bar(idatate,it) = gdat_data.te.error_bar(idatate,it);
- [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhopolnorm(idatate,it));
- rhoeff = [0; rhoeff];
- teeff = gdat_data.te.data(idatate(irhoeff),it);
- te_err_eff = gdat_data.te.error_bar(idatate(irhoeff),it);
- % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
- ij=find(teeff./te_err_eff>10.);
- if ~isempty(ij); te_err_eff(ij) = teeff(ij)./0.1; end
- %
- teeff = [teeff(1); teeff];
- te_err_eff = [1e4; te_err_eff];
- if gdat_data.gdat_params.fit_te_edge < 0
- [gdat_data.fit.te.data(:,it), gdat_data.fit.te.d_over_drhopolnorm(:,it)] = ...
- interpos(rhoeff,teeff,rhopolfit,fit_tension.te,[1 0],[0 0],te_err_eff);
- else
- [gdat_data.fit.te.data(:,it), gdat_data.fit.te.d_over_drhopolnorm(:,it)] = ...
- interpos(rhoeff,teeff,rhopolfit,fit_tension.te,[1 2],[0 gdat_data.gdat_params.fit_te_edge],te_err_eff);
- end
- % impose minimum value
- ij=find(gdat_data.fit.te.data(:,it)<fit_te_min);
- if ~isempty(ij); gdat_data.fit.te.data(ij,it) = fit_te_min; end
- end
+ gdat_data.fit.raw.te.data = NaN*ones(size(gdat_data.te.data));
+ gdat_data.fit.raw.te.error_bar = NaN*ones(size(gdat_data.te.data));
+ gdat_data.fit.raw.te.rhopolnorm = NaN*ones(size(gdat_data.te.data));
+ gdat_data.fit.te.data = gdat_data.fit.rhotornorm;
+ gdat_data.fit.te.d_over_drhotornorm = gdat_data.fit.rhotornorm;
elseif strcmp(data_request_effi{i},'ne')
- idatane = find(gdat_data.ne.data(indices_ok,it)>1 & gdat_data.grids_1d.rhopolnorm(indices_ok,it)<=1.05);
- idatane = indices_ok(idatane);
- if length(idatane)>0
- gdat_data.fit.raw.ne.rhopolnorm(idatane,it) = gdat_data.grids_1d.rhopolnorm(idatane,it);
- gdat_data.fit.raw.ne.data(idatane,it) = gdat_data.ne.data(idatane,it);
- gdat_data.fit.raw.ne.error_bar(idatane,it) = gdat_data.ne.error_bar(idatane,it);
- [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhopolnorm(idatane,it));
- rhoeff = [0; rhoeff];
- % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
- neeff = gdat_data.ne.data(idatane(irhoeff),it);
- ne_err_eff = gdat_data.ne.error_bar(idatane(irhoeff),it);
- ij=find(neeff./ne_err_eff>10.);
- if ~isempty(ij); ne_err_eff(ij) = neeff(ij)./0.1; end
- %
- neeff = [neeff(1); neeff];
- ne_err_eff = [1e21; ne_err_eff];
- if gdat_data.gdat_params.fit_ne_edge < 0
- [gdat_data.fit.ne.data(:,it), gdat_data.fit.ne.d_over_drhopolnorm(:,it)] = interpos(rhoeff,neeff,rhopolfit,fit_tension.ne,[1 0],[0 ...
+ gdat_data.fit.raw.ne.data = NaN*ones(size(gdat_data.ne.data));
+ gdat_data.fit.raw.ne.error_bar = NaN*ones(size(gdat_data.ne.data));
+ gdat_data.fit.raw.ne.rhopolnorm = NaN*ones(size(gdat_data.ne.data));
+ gdat_data.fit.ne.data =gdat_data.fit.rhotornorm;
+ gdat_data.fit.ne.d_over_drhotornorm = gdat_data.fit.rhotornorm;
+ end
+ for it=1:length(gdat_data.t)
+ if strcmp(data_request_effi{i},'te')
+ idatate = find(gdat_data.te.data(indices_ok,it)>1 & gdat_data.grids_1d.rhopolnorm(indices_ok,it)<=1.05);
+ idatate = indices_ok(idatate);
+ if length(idatate)>0
+ gdat_data.fit.raw.te.rhopolnorm(idatate,it) = gdat_data.grids_1d.rhopolnorm(idatate,it);
+ gdat_data.fit.raw.te.data(idatate,it) = gdat_data.te.data(idatate,it);
+ gdat_data.fit.raw.te.error_bar(idatate,it) = gdat_data.te.error_bar(idatate,it);
+ [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhopolnorm(idatate,it));
+ rhoeff = [0; rhoeff];
+ teeff = gdat_data.te.data(idatate(irhoeff),it);
+ te_err_eff = gdat_data.te.error_bar(idatate(irhoeff),it);
+ % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
+ ij=find(teeff./te_err_eff>10.);
+ if ~isempty(ij); te_err_eff(ij) = teeff(ij)./0.1; end
+ %
+ teeff = [teeff(1); teeff];
+ te_err_eff = [1e4; te_err_eff];
+ if gdat_data.gdat_params.fit_te_edge < 0
+ [gdat_data.fit.te.data(:,it), gdat_data.fit.te.d_over_drhopolnorm(:,it)] = ...
+ interpos(rhoeff,teeff,rhopolfit,fit_tension.te,[1 0],[0 0],te_err_eff);
+ else
+ [gdat_data.fit.te.data(:,it), gdat_data.fit.te.d_over_drhopolnorm(:,it)] = ...
+ interpos(rhoeff,teeff,rhopolfit,fit_tension.te,[1 2],[0 gdat_data.gdat_params.fit_te_edge],te_err_eff);
+ end
+ % impose minimum value
+ ij=find(gdat_data.fit.te.data(:,it)<fit_te_min);
+ if ~isempty(ij); gdat_data.fit.te.data(ij,it) = fit_te_min; end
+ end
+ elseif strcmp(data_request_effi{i},'ne')
+ idatane = find(gdat_data.ne.data(indices_ok,it)>1 & gdat_data.grids_1d.rhopolnorm(indices_ok,it)<=1.05);
+ idatane = indices_ok(idatane);
+ if length(idatane)>0
+ gdat_data.fit.raw.ne.rhopolnorm(idatane,it) = gdat_data.grids_1d.rhopolnorm(idatane,it);
+ gdat_data.fit.raw.ne.data(idatane,it) = gdat_data.ne.data(idatane,it);
+ gdat_data.fit.raw.ne.error_bar(idatane,it) = gdat_data.ne.error_bar(idatane,it);
+ [rhoeff,irhoeff] = sort(gdat_data.grids_1d.rhopolnorm(idatane,it));
+ rhoeff = [0; rhoeff];
+ % they are some strange low error_bars, so remove these by max(Te/error_bar)<=10; and changing it to large error bar
+ neeff = gdat_data.ne.data(idatane(irhoeff),it);
+ ne_err_eff = gdat_data.ne.error_bar(idatane(irhoeff),it);
+ ij=find(neeff./ne_err_eff>10.);
+ if ~isempty(ij); ne_err_eff(ij) = neeff(ij)./0.1; end
+ %
+ neeff = [neeff(1); neeff];
+ ne_err_eff = [1e21; ne_err_eff];
+ if gdat_data.gdat_params.fit_ne_edge < 0
+ [gdat_data.fit.ne.data(:,it), gdat_data.fit.ne.d_over_drhopolnorm(:,it)] = interpos(rhoeff,neeff,rhopolfit,fit_tension.ne,[1 0],[0 ...
0],ne_err_eff);
- else
- ij_in_1 = find(rhoeff<1);
- [gdat_data.fit.ne.data(:,it), gdat_data.fit.ne.d_over_drhopolnorm(:,it)] = ...
- interpos([rhoeff(ij_in_1); 1.],[neeff(ij_in_1); gdat_data.gdat_params.fit_ne_edge], ...
+ else
+ ij_in_1 = find(rhoeff<1);
+ [gdat_data.fit.ne.data(:,it), gdat_data.fit.ne.d_over_drhopolnorm(:,it)] = ...
+ interpos([rhoeff(ij_in_1); 1.],[neeff(ij_in_1); gdat_data.gdat_params.fit_ne_edge], ...
rhopolfit,fit_tension.ne,[1 2],[0 gdat_data.gdat_params.fit_ne_edge],[ne_err_eff(ij_in_1);ne_err_eff(1)]);
+ end
+ % impose minimum value
+ ij=find(gdat_data.fit.ne.data(:,it)<fit_ne_min);
+ if ~isempty(ij); gdat_data.fit.ne.data(ij,it) = fit_ne_min; end
end
- % impose minimum value
- ij=find(gdat_data.fit.ne.data(:,it)<fit_ne_min);
- if ~isempty(ij); gdat_data.fit.ne.data(ij,it) = fit_ne_min; end
end
end
end
end
- end
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'ni','ti'}
- nodenameeff_rho = 'rho';
- data_type_eff = data_request_eff;
- if strcmp(data_request_eff,'ni'); data_type_eff = 'dd'; end
- params_eff = gdat_data.gdat_params;
- if isfield(params_eff,'source') && ~isempty(params_eff.source)
- if strcmp(lower(params_eff.source),'chain2')
- params_eff.source = [data_request_eff(1) 'ion'];
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ case {'ni','ti'}
+ nodenameeff_rho = 'rho';
+ data_type_eff = data_request_eff;
+ if strcmp(data_request_eff,'ni'); data_type_eff = 'dd'; end
+ params_eff = gdat_data.gdat_params;
+ if isfield(params_eff,'source') && ~isempty(params_eff.source)
+ if strcmp(lower(params_eff.source),'chain2')
+ params_eff.source = [data_request_eff(1) 'ion'];
+ end
+ if strcmp(lower(params_eff.source(2:end)),'ion')
+ nodenameeff_rho = []; % profiles already on rho
+ end
+ else
+ params_eff.source = [datar_equest_eff(1) 'ion']; % only chain2 at this stage
end
- if strcmp(lower(params_eff.source(2:end)),'ion')
- nodenameeff_rho = []; % profiles already on rho
+ gdat_data.gdat_params = params_eff;
+ params_eff.doplot = 0;
+ % ne or Te from Thomson data on raw z mesh vs (z,t)
+ params_eff.data_request = {'ppf',params_eff.source,data_type_eff};
+ aa = gdat_jet(shot,params_eff);
+ if isempty(aa.data) || isempty(aa.t)
+ if gdat_params.nverbose>=3;
+ aa
+ disp(['with data_request= ' data_request_eff])
+ end
+ return
end
- else
- params_eff.source = [datar_equest_eff(1) 'ion']; % only chain2 at this stage
- end
- gdat_data.gdat_params = params_eff;
- params_eff.doplot = 0;
- % ne or Te from Thomson data on raw z mesh vs (z,t)
- params_eff.data_request = {'ppf',params_eff.source,data_type_eff};
- aa = gdat_jet(shot,params_eff);
- if isempty(aa.data) || isempty(aa.t)
- if gdat_params.nverbose>=3;
- aa
- disp(['with data_request= ' data_request_eff])
+ gdat_data.data = aa.data;
+ gdat_data.dim = aa.dim;
+ gdat_data.t = aa.dim{2};
+ gdat_data.x = aa.dim{1};
+ gdat_data.dimunits=[{'R [m]'} ; {'time [s]'}];
+ gdat_data.data_fullpath=[data_request_eff ' from ' params_eff.source];
+ gdat_data.(data_request_eff).data = aa.data;
+ gdat_data.(data_request_eff).t = aa.t;
+ gdat_data.(data_request_eff).r = aa.x;
+ if any(strcmp(fieldnames(aa),'units')) && ~isempty(aa.units)
+ gdat_data.units=aa.units;
+ else
+ if strcmp(data_request_eff,'ni')
+ gdat_data.units = 'm^{-3}';
+ elseif strcmp(data_request_eff,'ti')
+ gdat_data.units = 'eV';
+ end
end
- return
- end
- gdat_data.data = aa.data;
- gdat_data.dim = aa.dim;
- gdat_data.t = aa.dim{2};
- gdat_data.x = aa.dim{1};
- gdat_data.dimunits=[{'R [m]'} ; {'time [s]'}];
- gdat_data.data_fullpath=[data_request_eff ' from ' params_eff.source];
- gdat_data.(data_request_eff).data = aa.data;
- gdat_data.(data_request_eff).t = aa.t;
- gdat_data.(data_request_eff).r = aa.x;
- if any(strcmp(fieldnames(aa),'units')) && ~isempty(aa.units)
- gdat_data.units=aa.units;
- else
- if strcmp(data_request_eff,'ni')
- gdat_data.units = 'm^{-3}';
- elseif strcmp(data_request_eff,'ti')
- gdat_data.units = 'eV';
+ params_eff.data_request = {'ppf',params_eff.source,['e' data_type_eff]}; % not given for dd but ok will be empty
+ aaerr = gdat_jet(shot,params_eff);
+ gdat_data.error_bar = aaerr.data;
+ gdat_data.(data_request_eff).error_bar = aaerr.data;
+ if ~isempty(nodenameeff_rho)
+ params_eff.data_request = {'ppf',params_eff.source,'rho'};
+ aarho = gdat_jet(shot,params_eff);
+ gdat_data.rhopol = abs(aarho.data);
+ gdat_data.(data_request_eff).rhopol = abs(aarho.data); % keep rho >0
+ else
+ gdat_data.rhopol = gdat_data.x;
+ gdat_data.(data_request_eff).rhopol = gdat_data.x;
+ gdat_data.dimunits{1} = 'rhopol';
end
- end
- params_eff.data_request = {'ppf',params_eff.source,['e' data_type_eff]}; % not given for dd but ok will be empty
- aaerr = gdat_jet(shot,params_eff);
- gdat_data.error_bar = aaerr.data;
- gdat_data.(data_request_eff).error_bar = aaerr.data;
- if ~isempty(nodenameeff_rho)
- params_eff.data_request = {'ppf',params_eff.source,'rho'};
- aarho = gdat_jet(shot,params_eff);
- gdat_data.rhopol = abs(aarho.data);
- gdat_data.(data_request_eff).rhopol = abs(aarho.data); % keep rho >0
- else
- gdat_data.rhopol = gdat_data.x;
- gdat_data.(data_request_eff).rhopol = gdat_data.x;
- gdat_data.dimunits{1} = 'rhopol';
- end
- %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% $$$ case {'ne_rho', 'te_rho', 'nete_rho'}
% $$$ % if nete_rho, do first ne, then Te later (so fir stuff already done)
% $$$ zshift = 0.;
@@ -1282,7 +1282,7 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
gdat_data.gdat_params.source = sources_avail;
elseif ~iscell(gdat_data.gdat_params.source)
if ischar(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
+ gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
if ~any(strmatch(gdat_data.gdat_params.source,lower(sources_avail)))
if (gdat_params.nverbose>=1)
warning(['source= ' gdat_data.gdat_params.source ' is not part of the available sources: ' sprintf('''%s'' ',sources_avail{:})]);
@@ -1325,9 +1325,9 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
end
if ~isempty(ohm.data) && ~isempty(ohm.dim)
for i=1:length(fields_to_copy)
- if isfield(ohm,fields_to_copy{i})
- gdat_data.ohm.(fields_to_copy{i}) = ohm.(fields_to_copy{i});
- end
+ if isfield(ohm,fields_to_copy{i})
+ gdat_data.ohm.(fields_to_copy{i}) = ohm.(fields_to_copy{i});
+ end
end
gdat_data.ohm.raw_data = gdat_data.ohm.data;
sources_coeff(end+1) = 1; % to be added to sum at end
@@ -1353,19 +1353,19 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
% nbi
params_eff.data_request={'ppf','nbi','ptot'};
try
- nbi=gdat_jet(shot,params_eff);
+ nbi=gdat_jet(shot,params_eff);
catch
end
if ~isempty(nbi.data) && ~isempty(nbi.dim)
- for i=1:length(fields_to_copy)
- if isfield(nbi,fields_to_copy{i})
- gdat_data.nbi.(fields_to_copy{i}) = nbi.(fields_to_copy{i});
- end
- end
+ for i=1:length(fields_to_copy)
+ if isfield(nbi,fields_to_copy{i})
+ gdat_data.nbi.(fields_to_copy{i}) = nbi.(fields_to_copy{i});
+ end
+ end
% add to main with linear interpolation and 0 for extrapolated values
- gdat_data.data(:,end+1) = interpos(-21,gdat_data.nbi.t,gdat_data.nbi.data(:,end),gdat_data.t);
- gdat_data.x(end+1) =gdat_data.x(end)+1;
- gdat_data.label{end+1}='P_{nbi}';
+ gdat_data.data(:,end+1) = interpos(-21,gdat_data.nbi.t,gdat_data.nbi.data(:,end),gdat_data.t);
+ gdat_data.x(end+1) =gdat_data.x(end)+1;
+ gdat_data.label{end+1}='P_{nbi}';
sources_coeff(end+1) = 1; % to be added to sum at end
end
end
@@ -1374,7 +1374,7 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
% ic
params_eff.data_request={'ppf','rff','ptot'};
try
- ic=gdat_jet(shot,params_eff);
+ ic=gdat_jet(shot,params_eff);
if isempty(ic.data) || isempty(ic.dim)
error('Unable to get ppf/rff/ptot'); % Effectively a shortcut to the next catch block
end
@@ -1386,14 +1386,14 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
end
end
if ~isempty(ic.data) && ~isempty(ic.dim)
- for i=1:length(fields_to_copy)
- if isfield(ic,fields_to_copy{i})
- gdat_data.ic.(fields_to_copy{i}) = ic.(fields_to_copy{i});
- end
- end
- gdat_data.data(:,end+1) = interpos(-21,gdat_data.ic.t,gdat_data.ic.data,gdat_data.t);
- gdat_data.x(end+1) =gdat_data.x(end)+1;
- gdat_data.label{end+1}='P_{ic}';
+ for i=1:length(fields_to_copy)
+ if isfield(ic,fields_to_copy{i})
+ gdat_data.ic.(fields_to_copy{i}) = ic.(fields_to_copy{i});
+ end
+ end
+ gdat_data.data(:,end+1) = interpos(-21,gdat_data.ic.t,gdat_data.ic.data,gdat_data.t);
+ gdat_data.x(end+1) =gdat_data.x(end)+1;
+ gdat_data.label{end+1}='P_{ic}';
sources_coeff(end+1) = 1; % to be added to sum at end
end
end
@@ -1401,21 +1401,21 @@ elseif strcmp(mapping_for_jet.method,'switchcase')
% radiated power
params_eff.data_request='p_rad';
try
- rad=gdat_jet(shot,params_eff);
+ rad=gdat_jet(shot,params_eff);
catch
rad.data = [];
rad.dim = [];
end
if ~isempty(rad.data) && ~isempty(rad.dim)
- for i=1:length(fields_to_copy)
- if isfield(rad,fields_to_copy{i})
- gdat_data.rad.(fields_to_copy{i}) = rad.(fields_to_copy{i});
- end
- end
+ for i=1:length(fields_to_copy)
+ if isfield(rad,fields_to_copy{i})
+ gdat_data.rad.(fields_to_copy{i}) = rad.(fields_to_copy{i});
+ end
+ end
% add to main with linear interpolation and 0 for extrapolated values
- gdat_data.data(:,end+1) = interpos(-21,gdat_data.rad.t,gdat_data.rad.data,gdat_data.t);
- gdat_data.x(end+1) =gdat_data.x(end)+1;
- gdat_data.label{end+1}='P_{rad}';
+ gdat_data.data(:,end+1) = interpos(-21,gdat_data.rad.t,gdat_data.rad.data,gdat_data.t);
+ gdat_data.x(end+1) =gdat_data.x(end)+1;
+ gdat_data.label{end+1}='P_{rad}';
sources_coeff(end+1) = 0; % to not be added to sum at end
end
end
diff --git a/matlab/JET/jet_requests_mapping.m b/matlab/JET/jet_requests_mapping.m
index 664bf4be1a85890b5eb2aebb0e9b888cb37ad249..c5aa3bd48261e30b9bd3554625a19551a9d51c9a 100644
--- a/matlab/JET/jet_requests_mapping.m
+++ b/matlab/JET/jet_requests_mapping.m
@@ -5,13 +5,13 @@ function mapping = jet_requests_mapping(data_request)
% Defaults
mapping = struct(...
- 'label', '', ...
- 'method', '', ...
- 'expression','', ...
- 'timedim', -1, ... % dim which is the time is the database, to copy in .t, the other dims are in .x (-1 means last dimension)
- 'gdat_timedim',[], ... % if need to reshape data and dim orders to have timedim as gdat_timedim (shifting time to gdat_timedim)
- 'min', -inf, ...
- 'max', inf);
+ 'label', '', ...
+ 'method', '', ...
+ 'expression','', ...
+ 'timedim', -1, ... % dim which is the time is the database, to copy in .t, the other dims are in .x (-1 means last dimension)
+ 'gdat_timedim',[], ... % if need to reshape data and dim orders to have timedim as gdat_timedim (shifting time to gdat_timedim)
+ 'min', -inf, ...
+ 'max', inf);
% Note that gdat_timedim is set to timedim at end of this function if empty
% gdat_timedim should have effective index of the time dimension in gdat
@@ -38,384 +38,384 @@ if iscell(data_request) % || (~ischar(data_request) && length(data_request)>1)
end
switch lower(data_request)
- case 'a_minor'
- mapping.label = 'a\_minor';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'CR0'}];
- case 'b0'
- mapping.label = 'B_0';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'MAGN'},{'BVAC'}];
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''ppf'',''MAGN'',''BVAC''}; ' ...
+ case 'a_minor'
+ mapping.label = 'a\_minor';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'CR0'}];
+ case 'b0'
+ mapping.label = 'B_0';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'MAGN'},{'BVAC'}];
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''ppf'',''MAGN'',''BVAC''}; ' ...
'gdat_tmp=gdat_jet(shot,params_eff);gdat_tmp.r0=2.96;'];
- case 'beta'
- mapping.label = 'beta\_tor diag [%]';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'BTTD'}];
- case 'betan'
- mapping.label = '\beta_N';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'BTND'}];
- case 'betap'
- mapping.label = '\beta_p';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'BTPD'}];
- case 'cxrs'
- mapping.timedim = 2;
- mapping.label = 'cxrs';
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'delta'
- mapping.timedim = 1;
- mapping.label = 'delta';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''delta_bottom''; ' ...
+ case 'beta'
+ mapping.label = 'beta\_tor diag [%]';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'BTTD'}];
+ case 'betan'
+ mapping.label = '\beta_N';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'BTND'}];
+ case 'betap'
+ mapping.label = '\beta_p';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'BTPD'}];
+ case 'cxrs'
+ mapping.timedim = 2;
+ mapping.label = 'cxrs';
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'delta'
+ mapping.timedim = 1;
+ mapping.label = 'delta';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''delta_bottom''; ' ...
'gdat_tmp=gdat_jet(shot,params_eff);params_eff.data_request=''delta_top'';' ...
- 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data = 0.5.*(gdat_tmp.data+gdat_tmp2.data);' ...
- 'gdat_tmp.label=gdat_data.label; gdat_tmp.gdat_request=gdat_data.gdat_request;'];
- case 'delta_top'
- mapping.label = 'delta\_top';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'EFIT'},{'TRIU'}];
- case 'delta_bottom'
- mapping.label = 'delta\_bottom';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'EFIT'},{'TRIL'}];
- case {'ece', 'eced', 'ece_rho', 'eced_rho'}
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- mapping.expression = '';
- case 'eqdsk'
- mapping.timedim = 2;
- mapping.method = 'switchcase'; % could use function make_eqdsk directly?
- mapping.expression = '';
- case 'equil'
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase'; % could use function make_eqdsk directly?
- mapping.expression = '';
- case {'gas','gasm','gash','eler'}
- mapping.label = 'eler';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'gash'},{'eler'}];
- case 'halpha'
- mapping.label = 'Halpha';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'jpf'},{'dd'},{'s3-ad08'}];
- case 'ioh'
- mapping.timedim = 1;
- mapping.label = 'I ohmic transformer';
- mapping.method = 'signal';
- mapping.expression = [];
- case 'ip'
- mapping.timedim = 1;
- mapping.label = 'Plasma current';
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'efit'},{'xip'}];
- mapping.expression = [{'ppf'},{'MAGN'},{'IPLA'}];
- mapping.units = 'A';
- case 'kappa'
- mapping.timedim = 1;
- mapping.label = '\kappa';
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'EHTR'},{'ELON'}];
- mapping.expression = [{'ppf'},{'EFIT'},{'ELON'}];
- case {'li', 'l_i'}
- mapping.timedim = 1;
- mapping.label = 'l_i_3';
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'EFIT'},{'LI3M'}];
- case {'locked', 'locked_mode'}
- mapping.timedim = 1;
- mapping.label = 'locked mode';
- mapping.method = 'signal';
- mapping.expression = [{'jpf'},{'DA'},{'C2-LOCA'}];
- case 'mhd'
- mapping.timedim = 1;
- mapping.label = 'n=1 and n=2 amplitude';
- mapping.timedim = 1;
- mapping.method = 'switchcase';
+ 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data = 0.5.*(gdat_tmp.data+gdat_tmp2.data);' ...
+ 'gdat_tmp.label=gdat_data.label; gdat_tmp.gdat_request=gdat_data.gdat_request;'];
+ case 'delta_top'
+ mapping.label = 'delta\_top';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'EFIT'},{'TRIU'}];
+ case 'delta_bottom'
+ mapping.label = 'delta\_bottom';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'EFIT'},{'TRIL'}];
+ case {'ece', 'eced', 'ece_rho', 'eced_rho'}
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.expression = '';
+ case 'eqdsk'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase'; % could use function make_eqdsk directly?
+ mapping.expression = '';
+ case 'equil'
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase'; % could use function make_eqdsk directly?
+ mapping.expression = '';
+ case {'gas','gasm','gash','eler'}
+ mapping.label = 'eler';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'gash'},{'eler'}];
+ case 'halpha'
+ mapping.label = 'Halpha';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'jpf'},{'dd'},{'s3-ad08'}];
+ case 'ioh'
+ mapping.timedim = 1;
+ mapping.label = 'I ohmic transformer';
+ mapping.method = 'signal';
+ mapping.expression = [];
+ case 'ip'
+ mapping.timedim = 1;
+ mapping.label = 'Plasma current';
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'efit'},{'xip'}];
+ mapping.expression = [{'ppf'},{'MAGN'},{'IPLA'}];
+ mapping.units = 'A';
+ case 'kappa'
+ mapping.timedim = 1;
+ mapping.label = '\kappa';
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'EHTR'},{'ELON'}];
+ mapping.expression = [{'ppf'},{'EFIT'},{'ELON'}];
+ case {'li', 'l_i'}
+ mapping.timedim = 1;
+ mapping.label = 'l_i_3';
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'EFIT'},{'LI3M'}];
+ case {'locked', 'locked_mode'}
+ mapping.timedim = 1;
+ mapping.label = 'locked mode';
+ mapping.method = 'signal';
+ mapping.expression = [{'jpf'},{'DA'},{'C2-LOCA'}];
+ case 'mhd'
+ mapping.timedim = 1;
+ mapping.label = 'n=1 and n=2 amplitude';
+ mapping.timedim = 1;
+ mapping.method = 'switchcase';
% $$$ mapping.method = 'expression'; % {'JPF','DA','C1M-H306'} {'JPF','DA','C1M-T009'} (big) {'JPF','DA','C1M-MIT27'}{'jpf' 'da' 'c1m-h304'} nfft=1024*3;
% $$$ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''JPF'',''DA'',''C1H-I301''}; ' ...
% $$$ 'gdat_tmp=gdat_jet(shot,params_eff);gdat_tmp.data=reshape(gdat_tmp.data,length(gdat_tmp.data),1 );' ...
-% $$$ 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
-% $$$ 'gdat_tmp.n_1.data = gdat_tmp.data;gdat_tmp.n_1.data_request=params_eff.data_request;' ...
-% $$$ 'params_eff.data_request={''JPF'',''DA'',''C1H-I302''};' ...
-% $$$ 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
-% $$$ 'gdat_tmp.n_2.data = gdat_tmp2.data;gdat_tmp.n_2.data_request=params_eff.data_request;gdat_tmp.label={''n=1'',''n=2''};' ...
-% $$$ 'gdat_tmp.full_path=''n=1 in data and .n_1; .n_2'';' ...
-% $$$ 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
+% $$$ 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
+% $$$ 'gdat_tmp.n_1.data = gdat_tmp.data;gdat_tmp.n_1.data_request=params_eff.data_request;' ...
+% $$$ 'params_eff.data_request={''JPF'',''DA'',''C1H-I302''};' ...
+% $$$ 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+% $$$ 'gdat_tmp.n_2.data = gdat_tmp2.data;gdat_tmp.n_2.data_request=params_eff.data_request;gdat_tmp.label={''n=1'',''n=2''};' ...
+% $$$ 'gdat_tmp.full_path=''n=1 in data and .n_1; .n_2'';' ...
+% $$$ 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
% $$$ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''JPF'',''DA'',''C1M-T009''}; ' ...
% $$$ 'gdat_tmp=gdat_jet(shot,params_eff);gdat_tmp.data=reshape(gdat_tmp.data,length(gdat_tmp.data),1 );' ...
-% $$$ 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
-% $$$ 'gdat_tmp.n_1.data = gdat_tmp.data;gdat_tmp.n_1.data_request=params_eff.data_request;' ...
-% $$$ 'params_eff.data_request={''JPF'',''DA'',''C1M-H305''};' ...
-% $$$ 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
-% $$$ 'gdat_tmp.n_2.data = gdat_tmp2.data;gdat_tmp.n_2.data_request=params_eff.data_request;gdat_tmp.label={''n=1'',''n=2''};' ...
-% $$$ 'gdat_tmp.full_path=''n=1 in data and .n_1; .n_2'';' ...
-% $$$ 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;' ...
+% $$$ 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
+% $$$ 'gdat_tmp.n_1.data = gdat_tmp.data;gdat_tmp.n_1.data_request=params_eff.data_request;' ...
+% $$$ 'params_eff.data_request={''JPF'',''DA'',''C1M-H305''};' ...
+% $$$ 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+% $$$ 'gdat_tmp.n_2.data = gdat_tmp2.data;gdat_tmp.n_2.data_request=params_eff.data_request;gdat_tmp.label={''n=1'',''n=2''};' ...
+% $$$ 'gdat_tmp.full_path=''n=1 in data and .n_1; .n_2'';' ...
+% $$$ 'gdat_tmp.gdat_request=''mhd'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;' ...
% $$$ ''];
- case 'mhd_ampl'
- mapping.timedim = 1;
- mapping.label = 'n=1 and n=2 amplitude';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''JPF'',''DA'',''C1H-G101''}; ' ...
+ case 'mhd_ampl'
+ mapping.timedim = 1;
+ mapping.label = 'n=1 and n=2 amplitude';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request={''JPF'',''DA'',''C1H-G101''}; ' ...
'gdat_tmp=gdat_jet(shot,params_eff);gdat_tmp.data=reshape(gdat_tmp.data,length(gdat_tmp.data),1 );' ...
- 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
- 'gdat_tmp.n_1.data = gdat_tmp.data;gdat_tmp.n_1.data_request=params_eff.data_request;' ...
- 'params_eff.data_request={''JPF'',''DA'',''C1H-G102''};' ...
- 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
- 'gdat_tmp.n_2.data = gdat_tmp2.data;gdat_tmp.n_2.data_request=params_eff.data_request;gdat_tmp.label={''n=1'',''n=2''};' ...
- 'gdat_tmp.full_path=''n=1 amplitude in data and .n_1; .n_2'';' ...
- 'gdat_tmp.gdat_request=''mhd_ampl'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
- case 'ne'
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- case 'neint'
- mapping.timedim = 1;
- mapping.label = 'line integrated el. density';
- mapping.method = 'signal';
- mapping.expression = [{'DCN'},{'H-1'},{'JETD'}];
- case 'nel'
- mapping.timedim = 1;
- mapping.label = 'nel';
- mapping.method = 'signal';
- mapping.expression = [{'ppf'},{'KG1L'},{'LAD3'}];
- mapping.expression = [{'ppf'},{'HRTX'},{'NELA'}];
- case 'ne_rho'
- mapping.timedim = 2;
- mapping.label = 'ne';
- mapping.method = 'switchcase';
- case 'nete'
- mapping.timedim = 2;
- mapping.label = 'ne and Te'; % from chain2 or hrts with interpos fits
- mapping.method = 'switchcase';
- case 'nete_rho'
- mapping.timedim = 2;
- mapping.label = 'ne and Te';
- mapping.method = 'switchcase';
- case {'ng','ngreenwald','n_greenwald'}
- mapping.timedim = 1;
- mapping.label = 'nG=Ip[MA]/(\pi a^2)*1e20 on nel times';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ 'gdat_tmp.dim{1}=gdat_tmp.t;gdat_tmp.dim{2}=[1 2];gdat_tmp.x=gdat_tmp.dim{2};' ...
+ 'gdat_tmp.n_1.data = gdat_tmp.data;gdat_tmp.n_1.data_request=params_eff.data_request;' ...
+ 'params_eff.data_request={''JPF'',''DA'',''C1H-G102''};' ...
+ 'gdat_tmp2=gdat_jet(shot,params_eff);gdat_tmp.data(:,2)=reshape(gdat_tmp2.data,length(gdat_tmp2.data),1);' ...
+ 'gdat_tmp.n_2.data = gdat_tmp2.data;gdat_tmp.n_2.data_request=params_eff.data_request;gdat_tmp.label={''n=1'',''n=2''};' ...
+ 'gdat_tmp.full_path=''n=1 amplitude in data and .n_1; .n_2'';' ...
+ 'gdat_tmp.gdat_request=''mhd_ampl'';gdat_tmp.gdat_params.data_request=gdat_tmp.gdat_request;'];
+ case 'ne'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ case 'neint'
+ mapping.timedim = 1;
+ mapping.label = 'line integrated el. density';
+ mapping.method = 'signal';
+ mapping.expression = [{'DCN'},{'H-1'},{'JETD'}];
+ case 'nel'
+ mapping.timedim = 1;
+ mapping.label = 'nel';
+ mapping.method = 'signal';
+ mapping.expression = [{'ppf'},{'KG1L'},{'LAD3'}];
+ mapping.expression = [{'ppf'},{'HRTX'},{'NELA'}];
+ case 'ne_rho'
+ mapping.timedim = 2;
+ mapping.label = 'ne';
+ mapping.method = 'switchcase';
+ case 'nete'
+ mapping.timedim = 2;
+ mapping.label = 'ne and Te'; % from chain2 or hrts with interpos fits
+ mapping.method = 'switchcase';
+ case 'nete_rho'
+ mapping.timedim = 2;
+ mapping.label = 'ne and Te';
+ mapping.method = 'switchcase';
+ case {'ng','ngreenwald','n_greenwald'}
+ mapping.timedim = 1;
+ mapping.label = 'nG=Ip[MA]/(\pi a^2)*1e20 on nel times';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_jet(shot,params_eff);' ...
'if ~isempty(gdat_tmp.t);params_eff.data_request=''ip'';' ...
- 'gdat_tmp2=gdat_jet(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
- 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp2=gdat_jet(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
+ 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
'params_eff.data_request=''a_minor'';' ...
- 'gdat_tmp3=gdat_jet(shot,params_eff);ij=find(gdat_tmp3.data==0);gdat_tmp3.data(ij)=NaN;' ...
- 'tmp_data3=interp1(gdat_tmp3.t,gdat_tmp3.data,gdat_tmp.t,[],NaN);' ...
- 'gdat_tmp.data = abs(tmp_data2*1e-6./pi./(tmp_data3.^2+1e-5));' ...
- 'ij=find(gdat_tmp.data<0 | gdat_tmp.data>4);gdat_tmp.data(ij)=NaN;gdat_tmp.data = gdat_tmp.data * 1e20;end;'];
- case {'ngf','greenwald_fraction','f_greenwald','ng_fraction'}
- mapping.timedim = 1;
- mapping.label = 'Greenwald\_fraction=n\_el/n\_G';
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ 'gdat_tmp3=gdat_jet(shot,params_eff);ij=find(gdat_tmp3.data==0);gdat_tmp3.data(ij)=NaN;' ...
+ 'tmp_data3=interp1(gdat_tmp3.t,gdat_tmp3.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp.data = abs(tmp_data2*1e-6./pi./(tmp_data3.^2+1e-5));' ...
+ 'ij=find(gdat_tmp.data<0 | gdat_tmp.data>4);gdat_tmp.data(ij)=NaN;gdat_tmp.data = gdat_tmp.data * 1e20;end;'];
+ case {'ngf','greenwald_fraction','f_greenwald','ng_fraction'}
+ mapping.timedim = 1;
+ mapping.label = 'Greenwald\_fraction=n\_el/n\_G';
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_jet(shot,params_eff);if ~isempty(gdat_tmp.t);params_eff.data_request=''n_greenwald'';' ...
- 'gdat_tmp2=gdat_jet(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
- 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
- 'gdat_tmp.data = gdat_tmp.data./(tmp_data2+1e-5);end;'];
- case 'ni'
- mapping.method = 'switchcase'; % especially since might have option fit, etc
- case {'phi_tor', 'phitor', 'toroidal_flux'}
- mapping.label = 'toroidal_flux';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EQUI'},{'PHIT'}]; % note this is only chain2, so should check with efit...
- % there is FTOR from EFIT but it's on psinorm
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''PPF''},{''EFIT''},{''FTOR''}];' ...
+ 'gdat_tmp2=gdat_jet(shot,params_eff);ij=find(gdat_tmp2.data==0);gdat_tmp2.data(ij)=NaN;' ...
+ 'tmp_data2=interp1(gdat_tmp2.t,gdat_tmp2.data,gdat_tmp.t,[],NaN);' ...
+ 'gdat_tmp.data = gdat_tmp.data./(tmp_data2+1e-5);end;'];
+ case 'ni'
+ mapping.method = 'switchcase'; % especially since might have option fit, etc
+ case {'phi_tor', 'phitor', 'toroidal_flux'}
+ mapping.label = 'toroidal_flux';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EQUI'},{'PHIT'}]; % note this is only chain2, so should check with efit...
+ % there is FTOR from EFIT but it's on psinorm
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=[{''PPF''},{''EFIT''},{''FTOR''}];' ...
'gdat_tmp=gdat_jet(shot,params_eff);gdat_tmp.x=sqrt(gdat_tmp.x);gdat_tmp.dim{1}=gdat_tmp.x;'];
- case {'p_lh', 'plh'}
- mapping.label = 'p\_lh threshold';
- mapping.timedim = 1;
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ case {'p_lh', 'plh'}
+ mapping.label = 'p\_lh threshold';
+ mapping.timedim = 1;
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_jet(shot,params_eff);if ~isempty(gdat_tmp.t);params_eff.data_request=''b0'';gdat_tmpb0=gdat_jet(shot,params_eff);' ...
'params_eff.data_request=''surface_edge'';gdat_tmp_s=gdat_jet(shot,params_eff);' ...
- 'if ~isempty(gdat_tmp_s.t); s_nel=interpos(gdat_tmp_s.t,gdat_tmp_s.data,gdat_tmp.t,-1.);b0_nel=interpos(gdat_tmpb0.t,gdat_tmpb0.data,gdat_tmp.t,-1.);' ...
+ 'if ~isempty(gdat_tmp_s.t); s_nel=interpos(gdat_tmp_s.t,gdat_tmp_s.data,gdat_tmp.t,-1.);b0_nel=interpos(gdat_tmpb0.t,gdat_tmpb0.data,gdat_tmp.t,-1.);' ...
'gdat_tmp.data = 0.0488e6.*(gdat_tmp.data/1e20).^0.717.*abs(b0_nel).^0.803.*s_nel.^0.941;else;gdat_tmp=gdat_tmp_s;end;' ...
'gdat_tmp.label=''P\_LH threshold'';end'];
- case {'p_lh_a_r', 'plh_a_r'}
- mapping.label = 'p\_lh threshold';
- mapping.timedim = 1;
- mapping.method = 'expression';
- mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
+ case {'p_lh_a_r', 'plh_a_r'}
+ mapping.label = 'p\_lh threshold';
+ mapping.timedim = 1;
+ mapping.method = 'expression';
+ mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''nel'';' ...
'gdat_tmp=gdat_jet(shot,params_eff);if ~isempty(gdat_tmp.t);params_eff.data_request=''b0'';gdat_tmpb0=gdat_jet(shot,params_eff);' ...
'params_eff.data_request=''a_minor'';gdat_tmp_a=gdat_jet(shot,params_eff);' ...
- 'a_nel=interpos(gdat_tmp_a.t,gdat_tmp_a.data,gdat_tmp.t,-1.);b0_nel=interpos(gdat_tmpb0.t,gdat_tmpb0.data,gdat_tmp.t,-1.);' ...
+ 'a_nel=interpos(gdat_tmp_a.t,gdat_tmp_a.data,gdat_tmp.t,-1.);b0_nel=interpos(gdat_tmpb0.t,gdat_tmpb0.data,gdat_tmp.t,-1.);' ...
'gdat_tmp.data = 2.15e6.*abs(gdat_tmp.data/1e20).^0.782.*abs(b0_nel).^0.772.*abs(a_nel).^0.975.*abs(gdat_tmpb0.r0).^0.999;' ...
'gdat_tmp.label=''P\_LH threshold'';end;'];
- case {'p_ohmic', 'p_ohm', 'pohm'}
- mapping.label = 'p\_ohmic';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'POHM'}];
- case {'p_rad', 'prad'}
- mapping.label = 'p\_rad';
- mapping.timedim = 1;
+ case {'p_ohmic', 'p_ohm', 'pohm'}
+ mapping.label = 'p\_ohmic';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'POHM'}];
+ case {'p_rad', 'prad'}
+ mapping.label = 'p\_rad';
+ mapping.timedim = 1;
% $$$ mapping.method = 'signal';
% $$$ mapping.expression = [{'PPF'},{'bolo'},{'topi'}];
- mapping.method = 'switchcase';
- case 'powers'
- mapping.timedim = 1;
- mapping.label = 'various powers';
- mapping.method = 'switchcase';
- case 'psi_axis'
- mapping.label = 'psi\_axis';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'FAXS'}];
- case 'psi_edge'
- mapping.label = 'psi\_edge';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'FBND'}];
- case 'q0'
- mapping.label = 'q_0';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'QAX'}];
- % mapping.expression = [{'PPF'},{'EFIT'},{'QAXM'}];
- case 'q95'
- mapping.label = 'q_{95}';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'Q95'}];
- case 'q_edge'
- mapping.label = 'q_{edge}}';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'QWL'}];
- case 'q_rho'
- mapping.timedim = 2;
- mapping.gdat_timedim = 2;
- mapping.label = 'q';
- mapping.method = 'switchcase';
- case 'rgeom'
- mapping.label = 'Rgeom';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'RGEO'}];
- case 'r_inboard'
- mapping.label = 'R\_inboard';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'RMJI'}];
- case 'r_outboard'
- mapping.label = 'R\_outboard';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'RMJO'}];
- case 'rhotor'
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor';
- case 'rhotor_edge'
- mapping.timedim = 1;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor\_edge';
- case {'rhotor_norm','rhotornorm'}
- mapping.timedim = 2;
- mapping.method = 'switchcase';
- mapping.label = 'rhotor\_norm';
- case 'rhovol'
- mapping.timedim = 2;
- mapping.label = 'rhovol\_norm';
- mapping.method = 'switchcase';
- case 'rmag'
- mapping.label = 'R\_magaxis';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'RMAG'}];
- case {'rnt', 'neutron_rate'}
- mapping.label = 'neutron\_rate';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'TIN'},{'RNT'}];
- case {'sxr', 'sxr_s40', 'sxr_htv'}
- mapping.timedim = 1;
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase';
- case {'tbeo'}
- mapping.label = 'TBEO';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EDG8'},{'TBEO'}];
- case 'te'
- mapping.timedim = 2;
- mapping.label = 'Te';
- mapping.method = 'switchcase';
- case 'te_rho'
- mapping.timedim = 2;
- mapping.label = 'Te';
- mapping.method = 'switchcase';
- case 'ti'
- mapping.label = 'Ti';
- mapping.method = 'switchcase';
- case 'vloop'
- mapping.label = 'Vloop Upper Restraint Ring Flux Flux Loop, non-integrated';
- mapping.timedim = 1;
- mapping.label = 'Vloop';
- mapping.method = 'switchcase';
+ mapping.method = 'switchcase';
+ case 'powers'
+ mapping.timedim = 1;
+ mapping.label = 'various powers';
+ mapping.method = 'switchcase';
+ case 'psi_axis'
+ mapping.label = 'psi\_axis';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'FAXS'}];
+ case 'psi_edge'
+ mapping.label = 'psi\_edge';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'FBND'}];
+ case 'q0'
+ mapping.label = 'q_0';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'QAX'}];
+ % mapping.expression = [{'PPF'},{'EFIT'},{'QAXM'}];
+ case 'q95'
+ mapping.label = 'q_{95}';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'Q95'}];
+ case 'q_edge'
+ mapping.label = 'q_{edge}}';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'QWL'}];
+ case 'q_rho'
+ mapping.timedim = 2;
+ mapping.gdat_timedim = 2;
+ mapping.label = 'q';
+ mapping.method = 'switchcase';
+ case 'rgeom'
+ mapping.label = 'Rgeom';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'RGEO'}];
+ case 'r_inboard'
+ mapping.label = 'R\_inboard';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'RMJI'}];
+ case 'r_outboard'
+ mapping.label = 'R\_outboard';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'RMJO'}];
+ case 'rhotor'
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor';
+ case 'rhotor_edge'
+ mapping.timedim = 1;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor\_edge';
+ case {'rhotor_norm','rhotornorm'}
+ mapping.timedim = 2;
+ mapping.method = 'switchcase';
+ mapping.label = 'rhotor\_norm';
+ case 'rhovol'
+ mapping.timedim = 2;
+ mapping.label = 'rhovol\_norm';
+ mapping.method = 'switchcase';
+ case 'rmag'
+ mapping.label = 'R\_magaxis';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'RMAG'}];
+ case {'rnt', 'neutron_rate'}
+ mapping.label = 'neutron\_rate';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'TIN'},{'RNT'}];
+ case {'sxr', 'sxr_s40', 'sxr_htv'}
+ mapping.timedim = 1;
+ mapping.gdat_timedim = 2;
+ mapping.method = 'switchcase';
+ case {'tbeo'}
+ mapping.label = 'TBEO';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EDG8'},{'TBEO'}];
+ case 'te'
+ mapping.timedim = 2;
+ mapping.label = 'Te';
+ mapping.method = 'switchcase';
+ case 'te_rho'
+ mapping.timedim = 2;
+ mapping.label = 'Te';
+ mapping.method = 'switchcase';
+ case 'ti'
+ mapping.label = 'Ti';
+ mapping.method = 'switchcase';
+ case 'vloop'
+ mapping.label = 'Vloop Upper Restraint Ring Flux Flux Loop, non-integrated';
+ mapping.timedim = 1;
+ mapping.label = 'Vloop';
+ mapping.method = 'switchcase';
% $$$ mapping.method = 'signal';
% $$$ mapping.expression = [{'PPF'},{'MAGN'},{'VL'}]; % tension -1e2 (3rd signal good one
% $$$ mapping.expression = [{'JPF'},{'DA'},{'C2-VLRRU'}]; % tension -1e4
- case 'volume'
- mapping.label = 'Volume';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'VOLM'}];
- case 'volume_rho'
- mapping.timedim = 2;
- mapping.label = 'volume\_norm';
- mapping.method = 'switchcase';
- case {'wmhd', 'w_mhd'}
- mapping.label = 'W_mhd';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'WP'}];
- case 'zeff'
- mapping.label = 'zeff from KS3';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'KS3'},{'ZEFV'}];
- case 'zgeom'
- mapping.label = 'Z_{geom}';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'ZGEO'}];
- case 'zmag'
- mapping.label = 'Z\_magaxis';
- mapping.timedim = 1;
- mapping.method = 'signal';
- mapping.expression = [{'PPF'},{'EFIT'},{'ZMAG'}];
- %
- % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- % extra JET cases (not necessarily in official data_request name list)
- % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- %
- case 'transp'
- mapping.label = 'transp output';
- mapping.method = 'switchcase';
+ case 'volume'
+ mapping.label = 'Volume';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'VOLM'}];
+ case 'volume_rho'
+ mapping.timedim = 2;
+ mapping.label = 'volume\_norm';
+ mapping.method = 'switchcase';
+ case {'wmhd', 'w_mhd'}
+ mapping.label = 'W_mhd';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'WP'}];
+ case 'zeff'
+ mapping.label = 'zeff from KS3';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'KS3'},{'ZEFV'}];
+ case 'zgeom'
+ mapping.label = 'Z_{geom}';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'ZGEO'}];
+ case 'zmag'
+ mapping.label = 'Z\_magaxis';
+ mapping.timedim = 1;
+ mapping.method = 'signal';
+ mapping.expression = [{'PPF'},{'EFIT'},{'ZMAG'}];
+ %
+ % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ % extra JET cases (not necessarily in official data_request name list)
+ % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+ %
+ case 'transp'
+ mapping.label = 'transp output';
+ mapping.method = 'switchcase';
- otherwise
- mapping.label = data_request;
- mapping.method = 'signal'; % assume a full tracename is given, so just try with tdi (could check there are some ":", etc...)
- mapping.expression = data_request;
+ otherwise
+ mapping.label = data_request;
+ mapping.method = 'signal'; % assume a full tracename is given, so just try with tdi (could check there are some ":", etc...)
+ mapping.expression = data_request;
end
diff --git a/matlab/JET/mapflux_fast.m b/matlab/JET/mapflux_fast.m
index d7698a5c1bac2950f5beabe892c8f5a2987a4554..177aeb5320bbae56206773fdaefa80389c9cec6a 100644
--- a/matlab/JET/mapflux_fast.m
+++ b/matlab/JET/mapflux_fast.m
@@ -7,11 +7,11 @@ function flux=mapflux_fast(cij,ri,zi,r,z,varargin)
% syntaxe : flux=mapflux(cij,ri,zi,r,z)
%
% entrees :
-% cij : coefficients bspline (efit/sspr(nr+nz+1:nr+nz+nc))
-% ri : points de controle pour r (efit/sspr(1:nr))
-% zi : points de controle pour z (efit/sspr(nr+1:nr+nz))
-% r : grille en r pour la carte de flux (vecteur)
-% z : grille en z pour la carte de flux (vecteur)
+% cij : coefficients bspline (efit/sspr(nr+nz+1:nr+nz+nc))
+% ri : points de controle pour r (efit/sspr(1:nr))
+% zi : points de controle pour z (efit/sspr(nr+1:nr+nz))
+% r : grille en r pour la carte de flux (vecteur)
+% z : grille en z pour la carte de flux (vecteur)
%
% varargin{1}=1: output as diagonal of flux to get psin on (R,Z) set of points
% 0: output full matrix (default)
@@ -21,7 +21,7 @@ function flux=mapflux_fast(cij,ri,zi,r,z,varargin)
% =0: compute all splines (slightly faster when whole grid needed)
%
% sortie :
-% flux : matrice donnant le flux normalise sur la grille (r,z)
+% flux : matrice donnant le flux normalise sur la grille (r,z)
%~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
% auteur : patrick maget
% date : 13/10/2000
@@ -74,10 +74,10 @@ end
% fonction b-spline
% bki=bspline(ti,t,k,i)
%~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-% auteur : patrick maget
+% auteur : patrick maget
% date : 14/12/99
%~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-% retourne pour la valeur de i,
+% retourne pour la valeur de i,
% le vecteur de poids correspondant au vecteur de demande t
% seuls les elements de t situes entre ti(i) et ti(i+k+1) ont un poids non nul
diff --git a/matlab/JET/psirz.m b/matlab/JET/psirz.m
index 72abd3a4cbb9d87a4d425fb5ec624076ee86c6cd..40e26d0615e098edf7516861f12e27538ad2474a 100644
--- a/matlab/JET/psirz.m
+++ b/matlab/JET/psirz.m
@@ -1,9 +1,9 @@
function [r,z,psinrz,sspr,sspi]=psirz(shot,time,nrg,nzg,efitlab,uid,seqd,varargin);
%
% psirz : reconstruction des surfaces de flux
-%
+%
% ce programme utilise les donnees de efit ou eftm
-%
+%
% examples:
% [r,z,psinrz,sspr,sspi]=psirz(shot,time,nrg,nzg,[efitlab,uid,seq,ncont]);
% [r,z,psinrz,sspr,sspi]=psirz(50814,60,65,65,[],[],[],60,sspr,sspi); % to get plot and give sspr,sspi
@@ -11,7 +11,7 @@ function [r,z,psinrz,sspr,sspi]=psirz(shot,time,nrg,nzg,efitlab,uid,seqd,varargi
% entrees :
% shot : numero du choc jet
% time : time de l'analyse
-% nrg, nzg: nb de points de la grille en r (resp. en z) sur laquelle on fait la
+% nrg, nzg: nb de points de la grille en r (resp. en z) sur laquelle on fait la
% reconstruction des surfaces de flux.
% if nzg is negative, make symmetric box around zero
% varargin{1}: plot option: 0: do not plot contours, >0 plot contour with varargin{1} nb of contours (60 is good)
@@ -65,7 +65,7 @@ if nargin>=11 & ~isempty(varargin{4})
else
deltaz=0;
end
-
+
[x,ind]=min(abs(time-tpefit));
sspr_t=ssprs(:,ind);
sspi_t=sspis(:,ind);
@@ -122,14 +122,14 @@ function flux=mapflux(cij,ri,zi,r,z)
% syntaxe : flux=mapflux(cij,ri,zi,r,z)
%
% entrees :
-% cij : coefficients bspline (efit/sspr(nr+nz+1:nr+nz+nc))
-% ri : points de controle pour r (efit/sspr(1:nr))
-% zi : points de controle pour z (efit/sspr(nr+1:nr+nz))
-% r : grille en r pour la carte de flux (vecteur)
-% z : grille en z pour la carte de flux (vecteur)
+% cij : coefficients bspline (efit/sspr(nr+nz+1:nr+nz+nc))
+% ri : points de controle pour r (efit/sspr(1:nr))
+% zi : points de controle pour z (efit/sspr(nr+1:nr+nz))
+% r : grille en r pour la carte de flux (vecteur)
+% z : grille en z pour la carte de flux (vecteur)
%
% sortie :
-% flux : matrice donnant le flux normalise sur la grille (r,z)
+% flux : matrice donnant le flux normalise sur la grille (r,z)
%~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
% auteur : patrick maget
% date : 13/10/2000
@@ -149,10 +149,10 @@ flux=fpq;
% fonction b-spline
% bki=bspline(ti,t,k,i)
%~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-% auteur : patrick maget
+% auteur : patrick maget
% date : 14/12/99
%~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-% retourne pour la valeur de i,
+% retourne pour la valeur de i,
% le vecteur de poids correspondant au vecteur de demande t
% seuls les elements de t situes entre ti(i) et ti(i+k+1) ont un poids non nul
diff --git a/matlab/TCV/gdat_tcv.m b/matlab/TCV/gdat_tcv.m
index 02bcc746dbbe0126ea2a9394bf8aec0719c1b3df..e7ab04f1c2cc6789950a62dce34bfc3af88dbd9c 100644
--- a/matlab/TCV/gdat_tcv.m
+++ b/matlab/TCV/gdat_tcv.m
@@ -83,6 +83,7 @@ varargout{1}=cell(1,1);
error_status=1;
% construct main default parameters structure
+% parameters and defaults related to a specific request should be defined in the relevant switch case section
gdat_params.data_request = '';
default_machine = 'tcv';
@@ -143,9 +144,9 @@ if nargin>=1
% means mdsopen(shot) already performed or not shot asked for
try
if isempty(mdsipmex(8))
- shot_mds = shot;
+ shot_mds = shot;
else
- shot_mds = mdsipmex(2,'$SHOT');
+ shot_mds = mdsipmex(2,'$SHOT');
end
catch
shot_mds = shot;
@@ -156,18 +157,18 @@ if nargin>=1
if ischar(shot) || isempty(shot)
if gdat_params.nverbose>=1
if isstruct(data_request) && isfield(data_request,'data_request')
- if ~strcmp(data_request.data_request,'ids')
- warning(['shot cannot be opened with ' data_request.data_request]);
- return
- end
+ if ~strcmp(data_request.data_request,'ids')
+ warning(['shot cannot be opened with ' data_request.data_request]);
+ return
+ end
elseif ischar(data_request)
- if ~strcmp(data_request,'ids')
- warning(['shot cannot be opened with ' data_request]);
- return
- end
+ if ~strcmp(data_request,'ids')
+ warning(['shot cannot be opened with ' data_request]);
+ return
+ end
else
warning(['shot cannot be opened']);
- return
+ return
end
end
end
@@ -321,7 +322,7 @@ else
end
gdat_data.gdat_params.liuqe = liuqe_version;
liuqe_matlab = 1; % now default should be matlab liuqe nodes
-if liuqe_version<0 || (liuqe_version > 10 && liuqe_version < 20)
+if (liuqe_version > 10 && liuqe_version < 20)
liuqe_matlab = 0;
end
liuqe_version_eff = mod(liuqe_version,10);
@@ -341,7 +342,7 @@ if (iscell(mapping_for_tcv.expression) || isempty(strfind(mapping_for_tcv.expres
% requires FBTE
liuqe_version_eff = -1;
liuqe_version = -1;
- if isempty(findstr(mapping_for_tcv.expression,'tcv_eq'))
+ if isempty(findstr(mapping_for_tcv.expression,'tcv_eq')) && isempty(findstr(mapping_for_tcv.expression,'\'))
% if tcv_eq in expression, liuqe target will be modified to FBTE below with regexprep
begstr = 'tcv_eq( "';
substr_liuqe = '", "FBTE" )';
@@ -354,7 +355,7 @@ end
% should replace all above by just psitbx_str...
liuqe_matlab = 1;
switch liuqe_version
- case {-1}, liuqe_ext=''; psitbx_str='FBTE'; liuqe_matlab = 0;
+ case {-1}, liuqe_ext=''; psitbx_str='FBTE';
case {1,21}, liuqe_ext=''; psitbx_str='LIUQE.M';
case {11}, liuqe_ext=''; psitbx_str='LIUQE';liuqe_matlab = 0;
case {2, 3, 22, 23}, liuqe_ext=['_' num2str(mod(liuqe_version,10))]; psitbx_str=['LIUQE.M' num2str(mod(liuqe_version,10))];
@@ -1247,7 +1248,7 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
xx=repmat(reshape(gdat_data.dim{1},length(gdat_data.dim{1}),1),1,size(gdat_data.eqdsk(itime).psi,2));
yy=repmat(reshape(gdat_data.dim{2},1,length(gdat_data.dim{2})),size(gdat_data.eqdsk(itime).psi,1),1);
aa = interpos2Dcartesian(gdat_data.eqdsk(itime).rmesh,gdat_data.eqdsk(itime).zmesh ...
- ,gdat_data.eqdsk(itime).psi,xx,yy,-1,-1);
+ ,gdat_data.eqdsk(itime).psi,xx,yy,-1,-1);
gdat_data.data(:,:,itime) = aa;
end
else
@@ -1511,7 +1512,7 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
if ~isempty(gdat_data.gdat_params.trialindx) && gdat_data.gdat_params.trialindx < 0
gdat_data.gdat_params.trialindx = [];
end
-
+ % specific parameters check and default settings
if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
switch data_request_eff
case 'ec_data'
@@ -1525,7 +1526,7 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
end
elseif ~iscell(gdat_data.gdat_params.source)
if ischar(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
+ gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
if ~any(strmatch(gdat_data.gdat_params.source,lower(sources_avail)))
if (gdat_params.nverbose>=1)
warning(['source= ' gdat_data.gdat_params.source ' is not part of the available sources: ' sprintf('''%s'' ',sources_avail{:})]);
@@ -1548,6 +1549,10 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
end
end
end
+ if ~isfield(gdat_data.gdat_params,'ec_inputs') || isempty(gdat_data.gdat_params.ec_inputs) || ~isnumeric(gdat_data.gdat_params.ec_inputs)
+ gdat_data.gdat_params.ec_inputs = 0;
+ end
+ gdat_params.ec_inputs = gdat_data.gdat_params.ec_inputs;
% create structure for icd sources from params and complete with defaults
source_icd.ec = 'toray';
@@ -1572,32 +1577,41 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
ec_help = '';
% EC
- % fill ec_inputs from write_pgyro
- [~,time,pgyro,pgyro_ecrh,gyro2launcher,freq2launcher,~,~] = write_pgyro(shot,'doplots',0);
-
- ec_inputs.pgyro.data = pgyro;
- ec_inputs.pgyro.t = time;
- ec_inputs.pgyro.units = 'W';
- ec_inputs.pgyro.label = 'Power injected per launcher ; last index is total';
- ec_inputs.pgyro.x = 1:numel(pgyro(1,:));
- ec_inputs.pgyro.dim = {ec_inputs.pgyro.x, ec_inputs.pgyro.t};
- launchers_label = cellfun(@num2str, num2cell(1:size(pgyro,2)-1),'UniformOutput',false);
- launchers_label{end+1} = 'tot';
- ec_inputs.pgyro.dimunits = {launchers_label, 's'};
-
- ec_inputs.launchers_active.data = zeros(numel(pgyro_ecrh),1);
- for ii =1:numel(pgyro_ecrh)
- if ~isempty(pgyro_ecrh{ii}.data); ec_inputs.launchers_active.data(ii) = 1; end
- end
- ec_inputs.launchers_active.label = 'Active launchers in the shot (1:active, 0:inactive)';
+ if gdat_data.gdat_params.ec_inputs
+ % fill ec_inputs from write_pgyro
+ [~,time,pgyro,pgyro_ecrh,gyro2launcher,freq2launcher,~,~] = write_pgyro(shot,'doplots',0);
+
+ ec_inputs.pgyro.data = pgyro;
+ ec_inputs.pgyro.t = time;
+ ec_inputs.pgyro.units = 'W';
+ ec_inputs.pgyro.label = 'Power injected per launcher ; last index is total';
+ ec_inputs.pgyro.x = 1:numel(pgyro(1,:));
+ ec_inputs.pgyro.dim = {ec_inputs.pgyro.x, ec_inputs.pgyro.t};
+ launchers_label = cellfun(@num2str, num2cell(1:size(pgyro,2)-1),'UniformOutput',false);
+ launchers_label{end+1} = 'tot';
+ ec_inputs.pgyro.dimunits = {launchers_label, 's'};
+
+ ec_inputs.launchers_active.data = zeros(numel(pgyro_ecrh),1);
+ for ii =1:numel(pgyro_ecrh)
+ if ~isempty(pgyro_ecrh{ii}.data); ec_inputs.launchers_active.data(ii) = 1; end
+ end
+ ec_inputs.launchers_active.label = 'Active launchers in the shot (1:active, 0:inactive)';
- ec_inputs.gyro2launcher.data = gyro2launcher;
- ec_inputs.gyro2launcher.label = 'Gyrotron connected to launcher';
+ ec_inputs.gyro2launcher.data = gyro2launcher;
+ ec_inputs.gyro2launcher.label = 'Gyrotron connected to launcher';
- ec_inputs.freq2launcher.data = freq2launcher;
- ec_inputs.freq2launcher.label = 'Frequency in launcher';
- ec_inputs.freq2launcher.units = 'Hz';
+ ec_inputs.freq2launcher.data = freq2launcher;
+ ec_inputs.freq2launcher.label = 'Frequency in launcher';
+ ec_inputs.freq2launcher.units = 'Hz';
+ ec_inputs.comment = 'ec_inputs loaded from write_pyro(shot)';
+ else
+ ec_inputs.pgyro = [];
+ ec_inputs.launchers_active = [];
+ ec_inputs.gyro2launcher = [];
+ ec_inputs.freq2launcher = [];
+ ec_inputs.comment = 'Run gdat with name-value pair (''ec_inputs'',1) for ec_input information from write_pgyro';
+ end
gdat_data.ec.ec_inputs = ec_inputs;
% introduce flag to check whether ec_data could be retrieved successfully
@@ -1740,13 +1754,16 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
gdat_data.ec.ec_data = ec_data;
filled_successfully = true; %set flag to true
catch ME
- warning(ME.identifier,'Problem retrieving TORAY data. \nError message: %s',ME.message);
+ warning('Problem retrieving TORAY data. \nError message: %s',ME.message);
+ getReport(ME) % without ; to get output
% try to identify cause of the error
if ~check_nodes_filled(shot,'toray')
- if ~any(ec_inputs.launchers_active.data,1)
- msg = 'write_pyro(shot) found NO active launchers, maybe there was no EC in this shot?';
- else
- msg = 'write_pyro(shot) found active launchers, but TORAY nodes are no filled, check hldsi(shot), and (ask to) relaunch TORAY.';
+ if ~isempty(ec_inputs.launchers_active)
+ if ~any(ec_inputs.launchers_active.data,1)
+ msg = 'write_pyro(shot) found NO active launchers, maybe there was no EC in this shot?';
+ else
+ msg = 'write_pyro(shot) found active launchers, but TORAY nodes are not filled, check hldsi(shot), and (ask to) relaunch TORAY.';
+ end
end
elseif ~isempty(gdat_data.gdat_params.trialindx)
msg = 'Is the trial index filled? Check TORAY nodes with hdlsi(shot).';
@@ -2501,7 +2518,7 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
gdat_data.gdat_params.source = sources_avail;
elseif ~iscell(gdat_data.gdat_params.source)
if ischar(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
+ gdat_data.gdat_params.source = lower(gdat_data.gdat_params.source);
if ~any(strmatch(gdat_data.gdat_params.source,lower(sources_avail)))
if (gdat_params.nverbose>=1)
warning(['source= ' gdat_data.gdat_params.source ' is not part of the available sources: ' sprintf('''%s'' ',sources_avail{:})]);
@@ -2764,6 +2781,16 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
nodenameeff=[begstr 'q_psi' substr_liuqe];
end
tracetdi=tdi(nodenameeff);
+ if liuqe_matlab==1 && liuqe_version_eff==-1
+ % may have problems with dim{1} being indices instead of rhopol
+ if max(tracetdi.dim{1}) > 2
+ nodenameeff_rho = strrep(nodenameeff,'q_psi','rho');
+ rho_eff = mdsvalue(nodenameeff_rho);
+ if numel(tracetdi.dim{1}) == numel(rho_eff)
+ tracetdi.dim{1}(:) = rho_eff; % it is not sqrt(linspace...) anymore, hence take rho itself
+ end
+ end
+ end
if isempty(tracetdi.data) || isempty(tracetdi.dim) % || ischar(tracetdi.data) (to add?)
if (gdat_params.nverbose>=1); warning(['problems loading data for ' nodenameeff ' for data_request= ' data_request_eff]); end
if (gdat_params.nverbose>=3); disp(['rerun LIUQE?']); end
@@ -3207,10 +3234,6 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
else
nodenameeff=['tcv_eq("vol","' psitbx_str '")'];
end
- if liuqe_version_eff==-1
- data_request_eff = 'volume'; % only LCFS
- nodenameeff=[begstr 'volume' substr_liuqe];
- end
tracetdi=tdi(nodenameeff);
if (isempty(tracetdi.data) || isempty(tracetdi.dim)) && liuqe_matlab==0
% try to run psitbxput
@@ -3218,6 +3241,15 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
psitbxput(psitbxput_version,shot);
ishot = mdsopen(shot);
tracetdi=tdi(nodenameeff);
+ elseif liuqe_matlab==1 && liuqe_version_eff==-1
+ % may have problems with dim{1} being indices instead of rhopol
+ if max(tracetdi.dim{1}) > 2
+ nodenameeff_rho = 'tcv_eq("rho","FBTE")';
+ rho_eff = mdsvalue(nodenameeff_rho);
+ if numel(tracetdi.dim{1}) == numel(rho_eff)
+ tracetdi.dim{1}(:) = rho_eff;
+ end
+ end
end
if isempty(tracetdi.data) || isempty(tracetdi.dim) || ischar(tracetdi.data)
return
@@ -3293,41 +3325,195 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
- case {'sxr', 'mpx'}
+ case {'sxr', 'mpx', 'radcam'}
- if strcmp(data_request_eff,'mpx')
- data_request_eff = 'mpx'; % mpx chosen through parameter 'source' within 'sxr'
- gdat_data.data_request = data_request_eff;
- gdat_data.gdat_params.source = 'mpx';
+ if any(contains(data_request_eff,{'mpx','radcam'}))
+ % effective source chosen through parameter 'source' within 'sxr'
+ gdat_data.gdat_params.source = data_request_eff;
end
% sxr from dmpx by default or xtomo if 'camera','xtomo' is provided
if ~isfield(gdat_data.gdat_params,'source') || isempty(gdat_data.gdat_params.source)
- gdat_data.gdat_params.source = 'mpx';
- elseif ~strcmp(lower(gdat_data.gdat_params.source),'xtomo') && ~strcmp(lower(gdat_data.gdat_params.source),'mpx')
+ if shot < 70144
+ gdat_data.gdat_params.source = 'mpx';
+ else
+ gdat_data.gdat_params.source = 'radcam';
+ end
+ elseif ~any(contains(lower(gdat_data.gdat_params.source),{'xtomo','mpx','radcam'}))
if gdat_data.gdat_params.nverbose>=1
warning(['source = ' gdat_data.gdat_params.source ' not expected with data_request= ' data_request_eff])
end
return
end
+ % time_out: times at which to provide output data, if 2 values provided, return all values within that time interval
+ % for xtomo, can only provide a time interval, for radcam, can provide a time_out array on which interpos is computed
time_interval = [];
if isfield(gdat_data.gdat_params,'time_out') && ~isempty(gdat_data.gdat_params.time_out)
- if length(gdat_data.gdat_params.time_out) == 2
+ if numel(gdat_data.gdat_params.time_out) == 2
time_interval = gdat_data.gdat_params.time_out;
else
- if length(gdat_data.gdat_params.time_out) == 1
+ if numel(gdat_data.gdat_params.time_out) == 1
% 200ms includes all characteristic time constants
time_interval = [gdat_data.gdat_params.time_out-0.1 gdat_data.gdat_params.time_out+0.1];
else
- time_interval = [min(gdat_data.gdat_params.time_out)-0.1 max(gdat_data.gdat_params.time_out)+0.1];
+ if strcmp(gdat_data.gdat_params.source,'radcam')
+ time_interval = gdat_data.gdat_params.time_out; % for radcam provide time array on which to do interpos
+ else
+ time_interval = [min(gdat_data.gdat_params.time_out)-0.1 max(gdat_data.gdat_params.time_out)+0.1];
+ warning(['Expects a time interval [t1 t2] for ' data_request_eff ' in param time_out, uses [' ...
+ num2str(time_interval(1)) ',' num2str(time_interval(2)) ']' char(10)])
+ end
end
- warning(['Expects a time interval [t1 t2] for ' data_request_eff ' in param time_out, uses [' ...
- num2str(time_interval(1)) ',' num2str(time_interval(2)) ']' char(10)])
end
end
+ % at this stage 2 option for freq, raw data (fast, default), 10kHz or similar (slow)
+ freq_opt = 1;
if ~isfield(gdat_data.gdat_params,'freq')
- gdat_data.gdat_params.freq = 'slow';
+ gdat_data.gdat_params.freq = 'fast';
+ end
+ if strcmp(gdat_data.gdat_params.freq,'slow'); freq_opt = 0; end
+ % fit_tension for smoothing on slow timescale (radcam for example)
+ if ~isfield(gdat_data.gdat_params,'fit_tension') || isempty(gdat_data.gdat_params.fit_tension)
+ gdat_data.gdat_params.fit_tension = -1e2;
end
switch lower(gdat_data.gdat_params.source)
+ case {'radcam'}
+ gdat_data.gdat_params.source = 'radcam';
+ gdat_data.camera_list = {'top', 'upper','equatorial','bottom'};
+ gdat_data.channel_list = {[1:20],[21:40],[41:80], [81:100]};
+ if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
+ gdat_data.gdat_params.camera = {'equatorial'}; % default equatorial
+ disp(['loads all radcam cameras, each data also in subfield ' gdat_data.gdat_params.camera])
+ else
+ if ischar(gdat_data.gdat_params.camera) || (isstring(gdat_data.gdat_params.camera) && numel(gdat_data.gdat_params.camera)==1)
+ gdat_data.gdat_params.camera = {char(gdat_data.gdat_params.camera)};
+ end
+ if isnumeric(gdat_data.gdat_params.camera) && (min(gdat_data.gdat_params.camera)<5 && max(gdat_data.gdat_params.camera)>0)
+ ij = gdat_data.gdat_params.camera([gdat_data.gdat_params.camera>0 & gdat_data.gdat_params.camera<5]);
+ gdat_data.gdat_params.camera = gdat_data.camera_list(ij);
+ elseif any(startsWith(gdat_data.gdat_params.camera,gdat_data.camera_list).*endsWith(gdat_data.gdat_params.camera,gdat_data.camera_list))
+ ij = startsWith(gdat_data.gdat_params.camera,gdat_data.camera_list).*endsWith(gdat_data.gdat_params.camera,gdat_data.camera_list);
+ gdat_data.gdat_params.camera = lower(gdat_data.gdat_params.camera(ij>0));
+ if any(ij==0)
+ warning(['camera not defined: ' gdat_data.gdat_params.camera(ij==0)]);
+ disp(['list of cameras: ' gdat_data.camera_list])
+ end
+ else
+ error(['camera: ' gdat_data.gdat_params.camera ' not in list: ' gdat_data.camera_list])
+ end
+ end
+ if ~isfield(gdat_data.gdat_params,'channel') || isempty(gdat_data.gdat_params.channel)
+ for i=1:numel(gdat_data.gdat_params.camera)
+ gdat_data.gdat_params.(gdat_data.gdat_params.camera{i}).channel = ...
+ gdat_data.channel_list{[contains(gdat_data.camera_list,gdat_data.gdat_params.camera{i})]};
+ gdat_data.gdat_params.channel{i} = gdat_data.gdat_params.(gdat_data.gdat_params.camera{i}).channel;
+ end
+ else
+ if isnumeric(gdat_data.gdat_params.channel)
+ gdat_data.gdat_params.channel = {gdat_data.gdat_params.channel};
+ end
+ if numel(gdat_data.gdat_params.camera) ~= numel(gdat_data.gdat_params.channel)
+ gdat_data.gdat_params
+ error('expects same number of camera as number of channel group in each cell list')
+ end
+ all_channels = [];
+ for i=1:numel(gdat_data.gdat_params.camera)
+ all_channels(end+1:end+numel(gdat_data.gdat_params.channel{i})) = gdat_data.gdat_params.channel{i};
+ end
+ % check camera and channel chosen are consistent within camera interval, just redistribute
+ icount = 0;
+ for i=1:numel(gdat_data.camera_list)
+ ij = intersect(gdat_data.channel_list{i},all_channels);
+ if ~isempty(ij)
+ icount = icount + 1;
+ camera{icount} = gdat_data.camera_list{i};
+ channel{icount} = ij;
+ end
+ end
+ if ~isequal(sort(camera),sort(gdat_data.gdat_params.camera))
+ disp('***************************************************************************')
+ warning(sprintf('channel nbs and camera did not match, camera chosen adapted: %s %s %s %s',camera{:}));
+ disp('***************************************************************************')
+ gdat_data.gdat_params.camera = camera;
+ end
+ if ~isequal(sort(cell2mat(channel)),sort(cell2mat(gdat_data.gdat_params.channel))) || ...
+ numel(gdat_data.gdat_params.channel) ~= numel(channel)
+ warning(sprintf('channel nbs and channel did not match, channel chosen adapted'));
+ gdat_data.gdat_params.channel = channel;
+ end
+ for i=1:numel(gdat_data.gdat_params.camera)
+ gdat_data.gdat_params.(gdat_data.gdat_params.camera{i}).channel = gdat_data.gdat_params.channel{i};
+ end
+ end
+ gdat_data.x = [];
+ for i=1:numel(gdat_data.gdat_params.camera)
+ gdat_data.(gdat_data.gdat_params.camera{i}).x = gdat_data.gdat_params.(gdat_data.gdat_params.camera{i}).channel;
+ gdat_data.x(end+1:end+numel(gdat_data.(gdat_data.gdat_params.camera{i}).x)) = gdat_data.(gdat_data.gdat_params.camera{i}).x;
+ end
+ sxr = rc_load_diodes(shot,'diag_name',"sxr",'channels',gdat_data.x); % since all cameras with different channel number
+ % for "heavy" signals, can trim it to specified time_interval and/or reduce it to smaller nb points
+ if freq_opt == 1
+ % default, fast/raw time array
+ if ~isempty(time_interval)
+ if numel(time_interval) == 2
+ % extract data within [time_interval(1:2)]
+ ij = find(sxr.time>=time_interval(1) & sxr.time<=time_interval(end));
+ gdat_data.data = sxr.data(ij,:)';
+ gdat_data.t = sxr.time(ij);
+ else
+ % time_out array provided to obtain data, use closest points (since raw data on fast frequency)
+ ij = iround_os(sxr.time,time_interval);
+ gdat_data.data = sxr.data(ij,:)';
+ gdat_data.t = sxr.time(ij);
+ end
+ else
+ % raw data requested (default), no time_out provided
+ gdat_data.data = sxr.data';
+ gdat_data.t = sxr.time;
+ end
+ else
+ % slower frequency requested (or smoothed interpolation using interpos)
+ if ~isempty(time_interval)
+ if numel(time_interval) == 2
+ % construct a default 40kHz time base within time_interval(1:2)
+ gdat_data.t = linspace(time_interval(1),time_interval(2),round((time_interval(2)-time_interval(1))/0.25e-4));
+ else
+ % time array provided
+ gdat_data.t = time_interval;
+ end
+ else
+ % construct a default 40kHz time base within full raw time interval
+ gdat_data.t = linspace(sxr.time(1),sxr.time(end),round((sxr.time(end)-sxr.time(1))/0.25e-4));
+ end
+ % compute interpolation with tension provided
+ for i=1:size(sxr.data,2)
+ gdat_data.data(i,:) = interpos(sxr.time,sxr.data(:,i),gdat_data.t,gdat_data.gdat_params.fit_tension);
+ end
+ end
+ gdat_data.r_x = sxr.geometry.xchord(gdat_data.x,:);
+ gdat_data.z_x = sxr.geometry.ychord(gdat_data.x,:);
+ gdat_data.r_at_z0 = gdat_data.r_x(:,1) + ...
+ diff(gdat_data.r_x(:,:)')' .* (0-gdat_data.z_x(:,1))./(gdat_data.z_x(:,2)-gdat_data.z_x(:,1));
+ gdat_data.z_at_r09 = gdat_data.z_x(:,1) + ...
+ diff(gdat_data.z_x(:,:)')' .* (0.9-gdat_data.r_x(:,1))./(gdat_data.r_x(:,2)-gdat_data.r_x(:,1));
+ gdat_data.good_channels = sxr.good_channels;
+ gdat_data.data_fullpath = ['using rc_load_diodes(shot,''diag_name'',"sxr",...) with params in gdat_data.gdat_params'];
+ gdat_data.units = 'au';
+ gdat_data.dim = {gdat_data.x, gdat_data.t};
+ gdat_data.dimunits = {'channel', 's'};
+ gdat_data.label = strtrim(sprintf('radcam %s %s %s %s %s',gdat_data.gdat_params.camera{:}));
+ for i=1:numel(gdat_data.gdat_params.camera)
+ ij = iround_os(sxr.channels,gdat_data.(gdat_data.gdat_params.camera{i}).x);
+ gdat_data.(gdat_data.gdat_params.camera{i}).data = gdat_data.data(:,ij)';
+ gdat_data.(gdat_data.gdat_params.camera{i}).t = gdat_data.t;
+ gdat_data.(gdat_data.gdat_params.camera{i}).r_x = sxr.geometry.xchord(gdat_data.(gdat_data.gdat_params.camera{i}).x,:);
+ gdat_data.(gdat_data.gdat_params.camera{i}).z_x = sxr.geometry.ychord(gdat_data.(gdat_data.gdat_params.camera{i}).x,:);
+ gdat_data.(gdat_data.gdat_params.camera{i}).r_at_z0 = gdat_data.r_at_z0(ij);
+ gdat_data.(gdat_data.gdat_params.camera{i}).z_at_r09 = gdat_data.z_at_r09(ij);
+ gdat_data.(gdat_data.gdat_params.camera{i}).good_channels = intersect(gdat_data.(gdat_data.gdat_params.camera{i}).x,sxr.good_channels);
+ gdat_data.(gdat_data.gdat_params.camera{i}).label = sprintf('radcam %s nb chords: %d', ...
+ gdat_data.gdat_params.camera{i},numel(gdat_data.(gdat_data.gdat_params.camera{i}).x));
+ end
+
case {'mpx', 'dmpx'}
gdat_data.gdat_params.source = 'mpx';
if ~isfield(gdat_data.gdat_params,'camera') || isempty(gdat_data.gdat_params.camera)
@@ -3341,8 +3527,6 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
end
return
end
- freq_opt = 0;
- if strcmp(gdat_data.gdat_params.freq,'fast'); freq_opt = 1; end
t_int = [0 10]; % starts from 0 otherwise mpxdata gives data from t<0
if ~isempty(time_interval); t_int = time_interval; end
gdat_data.top.data = [];
@@ -3459,7 +3643,6 @@ elseif strcmp(mapping_for_tcv.method,'switchcase')
end
-
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
case {'transp'}
% read transp netcdf output file provided in source parameter and generate substructure with all variables
diff --git a/matlab/TCV/get_xtomo_data.m b/matlab/TCV/get_xtomo_data.m
index 0c0c69a47c7a4cba4689321d38e8c4ec3d61cfe8..d46922a66aa84dad9372da1acb002307321c1958 100755
--- a/matlab/TCV/get_xtomo_data.m
+++ b/matlab/TCV/get_xtomo_data.m
@@ -1,26 +1,26 @@
function [sig,t]=get_xtomo_data(shot,t1,t2,dt,fans,angfact,tag);
% -
-%[sig,t]=get_xtomo_data_m5(shot,t1,t2,dt,fans,angfact,tag);
+%[sig,t]=get_xtomo_data_m5(shot,t1,t2,dt,fans,angfact,tag);
%
-% INPUT:
-% shot: TCV shot
+% INPUT:
+% shot: TCV shot
% t1: start time
% t2: stop time
-% dt: timestep
+% dt: timestep
% fans: camera switch, e.g. [0 0 0 0 0 0 1 0 1 0];
-% angfact: relative etendue, size: [20 x 10]
-% tag 'full' or 'brief', indicates if it is
+% angfact: relative etendue, size: [20 x 10]
+% tag 'full' or 'brief', indicates if it is
% a slow or a fast Pentland acquisition
%
% OUTPUTS:
-% sig: xtomo signals, size: [sum(fans) x length(t)]
+% sig: xtomo signals, size: [sum(fans) x length(t)]
% t: times
-%
-% ATTENTION: length(time) may be shorter than foreseen !!
+%
+% ATTENTION: length(time) may be shorter than foreseen !!
%
% This routine works on Matlab5.
-% Original routine for Matlab4 by Anton Mathias.
+% Original routine for Matlab4 by Anton Mathias.
%
% Last update: 25-08-1999
%
@@ -29,468 +29,462 @@ function [sig,t]=get_xtomo_data(shot,t1,t2,dt,fans,angfact,tag);
%---- get data and offsets ---------------------------------------------------
- % set a flag if flattenign of noise
- % for channels with low signal
-
-
- iflat=0;
- minsiglevel=0.01;
- satlevel=9.9;
-
-
- st1=sprintf('%6.4f',t1);
- st2=sprintf('%6.4f',t2);
- sdt=num2str(dt);
-
-% sdt=sprintf('%6.4f',dt); % modified from old version
-
-
- if shot >= 13836 & shot <= 13848
- tstart=-0.02;tstop=-0.01; % this one is to be used only for
- else % shot=13836 to shot=13848
- tstart=-0.04;tstop=-0.01;
- end
-
- ststart=num2str(tstart);
- ststop=num2str(tstop);
-
-if nargin <=6
-
- shot=mdsopen(shot);
- t=mdsdata(['dim_of(\base::xtomo:array_001[',st1,':',st2,':',sdt,',*])']);
- S1=[];
- S2=[];
- S3=[];
- S4=[];
- S5=[];
- S6=[];
- S7=[];
- S8=[];
- S9=[];
- S10=[];
-
- if isempty(t)
- disp('get_xtomo_data: sorry, nothing to be found for this shot ...')
- return
- else
- disp('*-------------------------------------------*')
- disp('| get_xtomo_data: getting data from MDS |')
- disp('*-------------------------------------------*')
- end
-
- if shot>6768
-
- if fans(1)
- S=mdsdata(['\base::xtomo:array_001[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_001[',ststart,':',ststop,',0:19]']);
- S1=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(2)
- S=mdsdata(['\base::xtomo:array_002[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_002[',ststart,':',ststop,',0:19]']);
- S2=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(3)
- S=mdsdata(['\base::xtomo:array_003[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_003[',ststart,':',ststop,',0:19]']);
- S3=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(4)
- S=mdsdata(['\base::xtomo:array_004[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_004[',ststart,':',ststop,',0:19]']);
- S4=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(5)
- S=mdsdata(['\base::xtomo:array_005[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_005[',ststart,':',ststop,',0:19]']);
- S5=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(6)
- S=mdsdata(['\base::xtomo:array_006[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_006[',ststart,':',ststop,',0:19]']);
- S6=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(7)
- S=mdsdata(['\base::xtomo:array_007[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_007[',ststart,':',ststop,',0:19]']);
- S7=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(8)
- S=mdsdata(['\base::xtomo:array_008[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_008[',ststart,':',ststop,',0:19]']);
- S8=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(9)
- S=mdsdata(['\base::xtomo:array_009[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_009[',ststart,':',ststop,',0:19]']);
- S9=S-repmat(mean(offset),length(t),1)';
- end
-
- if fans(10)
- S=mdsdata(['\base::xtomo:array_010[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_010[',ststart,':',ststop,',0:19]']);
- S10=S-repmat(mean(offset),length(t),1)';
- end
-
-
- sig=-[S1;S2;S3;S4;S5;S6;S7;S8;S9;S10];
- [satrow,satcol]=find(abs(sig)>satlevel);
-
- if ~isempty(satcol)
- i_tlimit=min(satcol(:));
- if i_tlimit>1
- sig=sig(:,1:i_tlimit-1);
- t=t(1:i_tlimit-1);
- disp(['get_xtomo_data WARNING: some channels saturated',......
- ', t2 changed to ',sprintf('%6.4f',max(t))]);
- else
- sig=[];
- t=[];
- disp('get_xtomo_data WARNING: saturations, no data returned');
- return
- end
- end
-
-
- angfact=angfact(:,find(fans));
- angfact=angfact(:);
- gains=get_xtomo_gains(shot);
- % earlier than shot xxx:
- perm=[1:180,[180+[2,1,4,3,6,5,8,7,10,9,12,11,14,13,16,15,18,17,20,19]]];
- gains=gains(perm);
- iact=find(fans);
- nact=length(iact);
- idetec=[];
- for k=1:nact
- idetec=[idetec,(iact(k)-1)*20+1:iact(k)*20];
- end
- gains=gains(idetec);
- gains=gains(:);
- fac=ones(size(gains))./gains;
-
-
- sig=-sig.*(repmat(fac,1,length(t)));
-
- if iflat
- for ii=1:length(t)
- imini=find( sig(:,ii) < minsiglevel*max(sig(:,ii)));
- sig(imini,ii)=zeros(size(imini));
- end
- end
-
- t=t';
- sig=sig.*(repmat(angfact,1,length(t)));
-
-
- else
-
- if fans(9)
- S=mdsdata(['\base::xtomo:array_001[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_001[',ststart,':',ststop,',0:19]']);
- V=S-repmat(mean(offset),length(t),1)';
- end
- if fans(7)
- S=mdsdata(['\base::xtomo:array_002[',st1,':',st2,':',sdt,',0:19]'])';
- offset=mdsdata(['\base::xtomo:array_002[',ststart,':',ststop,',0:19]']);
- H=S-repmat(mean(offset),length(t),1)';
- end
-
- %---- read gains of the current shot ---------------------------------------
-
- gains=get_xtomo_gains(shot);
- g1=gains(1:20)';
- g2=gains(21:40)';
-
- %------ solid angle factors -----------------------
-
- aom1=angfact(:,9);
- aom2=angfact(:,7);
-
-
- %----- calculate correcting factors ---------------------------------------
-
- fac1=(aom1./g1);
- fac2=(aom2./g2);
-
- %--- result: offset-, calibration- and angular-factor corrected data -------
-
- V=-V.*(repmat(fac1,1,length(t))); % vertical camera:
- H=-H.*(repmat(fac2,1,length(t))); % horizontal camera:
-
-
- sig=[H;V];
-
- t=t';
-
- end
+% set a flag if flattenign of noise
+% for channels with low signal
-else
- if (~strcmp(tag,'brief') & ~strcmp(tag,'full'))
- disp('Only full or brief accepted as tag')
- return
- end
-
-
- trace_tree=['\atlas::t_rex3_' tag ':'];
- trace=[trace_tree 'signal_inp:p'];
- %shot=mdsopen('eltca1::tcv_shot',shot);
- shot=mdsopen(shot);
- tref=mdsdata(['_tref=dim_of(' trace,'001)']); %trace :p001
- dtref=mdsdata('_dtref = _tref[1]-_tref[0]');
-
-
- S1=[];
- S2=[];
- S3=[];
- S4=[];
- S5=[];
- S6=[];
- S7=[];
- S8=[];
- S9=[];
- S10=[];
-
- t_1=mdsdata('_t = dim_of(\atlas::t_rex3_full:signal_inp:p001)');
- dt1=mdsdata('_dt = _t[1]-_t[0]');
- npts=floor(mdsdata(['_npts=(',ststop,'-(',ststart,'))/_dt']));
-
-
-
-if isempty(t_1)
- disp('get_xtomo_data: sorry, nothing to be found for this shot ...')
- return
- else
- disp('*--------------------------------------------*')
- disp('| getting Pentland acquisition: getting *')
- if strcmp(tag,'brief')
- disp('| BRIEF data from MDS *');
- else
- disp('| FULL data from MDS *');
- end
- disp('*--------------------------------------------*');
- end
-
-
-
- if ((dt - dtref) < 1e-7 | floor(dt/dtref) ==0)
- step='1';
- else
- step =num2str(dt/dtref);
- end
-
-
- ind1=find( abs(tref-t1) == min(abs(tref-t1)));
- npts1=floor(mdsdata(['_npts1=(',st2,'-(',st1,'))/_dtref']));
- sind1=num2str(ind1);
- sind2=num2str(npts1+ind1);
-
- t=mdsdata(['data(_tref)[',sind1,':',sind2,':', step, ']']);
-
-
-
-
- if fans(1)
- channel=['001';'002';'003';'004';'005';'006';'007';'008';'009';'010';...
- '011';'012';'013';'014';'015';'016';'017';'018';'019';'020'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':' , step,']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S1(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
-
-
-
- if fans(2)
- channel=['021';'022';'023';'024';'025';'026';'027';'028';'029';'030';...
- '031';'032';'033';'034';'035';'036';'037';'038';'039';'040'];
- for i=1:20
-
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S2(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
- if fans(3)
-
- channel=['041';'042';'043';'044';'045';'046';'047';'048';'049';'050';...
- '051';'052';'053';'054';'055';'056';'057';'058';'059';'060'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S3(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
-
- if fans(4)
- channel=['061';'062';'063';'064';'065';'066';'067';'068';'069';'070';...
- '071';'072';'073';'074';'075';'076';'077';'078';'079';'080'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S4(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
- if fans(5)
- channel=['081';'082';'083';'084';'085';'086';'087';'088';'089';'090';...
- '091';'092';'093';'094';'095';'096';'097';'098';'099';'100'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':',step,']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S5(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
-
- if fans(6)
- channel=['101';'102';'103';'104';'105';'106';'107';'108';'109';'110';...
- '111';'112';'113';'114';'115';'116';'117';'118';'119';'120'];
- for i=1:20
-% S(i,:)=mdsdata([trace,channel(i,:),'[',st1,':',st2,':',sdt,':',step,']'])'
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S6(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
- if fans(7)
- channel=['121';'122';'123';'124';'125';'126';'127';'128';'129';'130';...
- '131';'132';'133';'134';'135';'136';'137';'138';'139';'140'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':',step,']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S7(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
- if fans(8)
- channel=['141';'142';'143';'144';'145';'146';'147';'148';'149';'150';...
- '151';'152';'153';'154';'155';'156';'157';'158';'159';'160'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step,']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S8(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
- if fans(9)
- channel=['161';'162';'163';'164';'165';'166';'167';'168';'169';'170';...
- '171';'172';'173';'174';'175';'176';'177';'178';'179';'180'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step,']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S9(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
- if fans(10)
-% channel=['181';'182';'183';'184';'185';'186';'187';'188';'189';'190';...
-% '191';'192';'193';'194';'195';'196';'197';'198';'199';'200'];
-
-% this permutation takes into account some not well defined (not yet)
-% hardware corrections. Are the gains to be permutated ?
-
-
- channel=['182';'181';'184';'183';'186';'185';'188';'187';'190';'189';...
- '192';'191';'194';'193';'196';'195';'198';'197';'200';'199'];
- for i=1:20
-% S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
-
-
- S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step,']'])';
- offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
- S10(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
- end
- end
-
- sig=[S1;S2;S3;S4;S5;S6;S7;S8;S9;S10];
-
-
- [satrow,satcol]=find(abs(sig)>satlevel);
-
- if ~isempty(satcol)
- i_tlimit=min(satcol(:));
- if i_tlimit>1
- sig=sig(:,1:i_tlimit-1);
- t=t(1:i_tlimit-1);
- disp(['get_xtomo_data WARNING: some channels saturated',......
- ', t2 changed to ',sprintf('%6.4f',max(t))]);
- else
- sig=[];
- t=[];
- disp('get_xtomo_data WARNING: saturations, no data returned');
- return
- end
- end
-
-
- angfact=angfact(:,find(fans));
- angfact=angfact(:);
- gains=get_xtomo_gains(shot);
- % earlier than shot xxx:
- perm=[1:180,[180+[2,1,4,3,6,5,8,7,10,9,12,11,14,13,16,15,18,17,20,19]]];
- gains=gains(perm);
- iact=find(fans);
- nact=length(iact);
- idetec=[];
- for k=1:nact
- idetec=[idetec,(iact(k)-1)*20+1:iact(k)*20];
- end
- gains=gains(idetec);
- gains=gains(:);
- fac=ones(size(gains))./gains;
-
-
- sig=sig.*(repmat(fac,1,length(t)));
-
- if iflat
- for ii=1:length(t)
- imini=find( sig(:,ii) < minsiglevel*max(sig(:,ii)));
- sig(imini,ii)=zeros(size(imini));
- end
- end
-
- t=t';
- sig=sig.*(repmat(angfact,1,length(t)));
-
+iflat=0;
+minsiglevel=0.01;
+satlevel=9.9;
+
+
+st1=sprintf('%6.4f',t1);
+st2=sprintf('%6.4f',t2);
+sdt=num2str(dt);
+
+% sdt=sprintf('%6.4f',dt); % modified from old version
+
+if shot >= 13836 & shot <= 13848
+ tstart=-0.02;tstop=-0.01; % this one is to be used only for
+else % shot=13836 to shot=13848
+ tstart=-0.04;tstop=-0.01;
end
-mdsclose
+ststart=num2str(tstart);
+ststop=num2str(tstop);
+
+if nargin <=6
+
+ shot=mdsopen(shot);
+ t=mdsdata(['dim_of(\base::xtomo:array_001[',st1,':',st2,':',sdt,',*])']);
+ S1=[];
+ S2=[];
+ S3=[];
+ S4=[];
+ S5=[];
+ S6=[];
+ S7=[];
+ S8=[];
+ S9=[];
+ S10=[];
+
+ if isempty(t)
+ disp('get_xtomo_data: sorry, nothing to be found for this shot ...')
+ return
+ else
+ disp('*-------------------------------------------*')
+ disp('| get_xtomo_data: getting data from MDS |')
+ disp('*-------------------------------------------*')
+ end
+
+ if shot>6768
+
+ if fans(1)
+ S=mdsdata(['\base::xtomo:array_001[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_001[',ststart,':',ststop,',0:19]']);
+ S1=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(2)
+ S=mdsdata(['\base::xtomo:array_002[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_002[',ststart,':',ststop,',0:19]']);
+ S2=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(3)
+ S=mdsdata(['\base::xtomo:array_003[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_003[',ststart,':',ststop,',0:19]']);
+ S3=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(4)
+ S=mdsdata(['\base::xtomo:array_004[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_004[',ststart,':',ststop,',0:19]']);
+ S4=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(5)
+ S=mdsdata(['\base::xtomo:array_005[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_005[',ststart,':',ststop,',0:19]']);
+ S5=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(6)
+ S=mdsdata(['\base::xtomo:array_006[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_006[',ststart,':',ststop,',0:19]']);
+ S6=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(7)
+ S=mdsdata(['\base::xtomo:array_007[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_007[',ststart,':',ststop,',0:19]']);
+ S7=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(8)
+ S=mdsdata(['\base::xtomo:array_008[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_008[',ststart,':',ststop,',0:19]']);
+ S8=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(9)
+ S=mdsdata(['\base::xtomo:array_009[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_009[',ststart,':',ststop,',0:19]']);
+ S9=S-repmat(mean(offset),length(t),1)';
+ end
+
+ if fans(10)
+ S=mdsdata(['\base::xtomo:array_010[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_010[',ststart,':',ststop,',0:19]']);
+ S10=S-repmat(mean(offset),length(t),1)';
+ end
+
+
+ sig=-[S1;S2;S3;S4;S5;S6;S7;S8;S9;S10];
+ [satrow,satcol]=find(abs(sig)>satlevel);
+
+ if ~isempty(satcol)
+ i_tlimit=min(satcol(:));
+ if i_tlimit>1
+ sig=sig(:,1:i_tlimit-1);
+ t=t(1:i_tlimit-1);
+ disp(['get_xtomo_data WARNING: some channels saturated',......
+ ', t2 changed to ',sprintf('%6.4f',max(t))]);
+ else
+ sig=[];
+ t=[];
+ disp('get_xtomo_data WARNING: saturations, no data returned');
+ return
+ end
+ end
+
+
+ angfact=angfact(:,find(fans));
+ angfact=angfact(:);
+ gains=get_xtomo_gains(shot);
+ % earlier than shot xxx:
+ perm=[1:180,[180+[2,1,4,3,6,5,8,7,10,9,12,11,14,13,16,15,18,17,20,19]]];
+ gains=gains(perm);
+ iact=find(fans);
+ nact=length(iact);
+ idetec=[];
+ for k=1:nact
+ idetec=[idetec,(iact(k)-1)*20+1:iact(k)*20];
+ end
+ gains=gains(idetec);
+ gains=gains(:);
+ fac=ones(size(gains))./gains;
+
+
+ sig=-sig.*(repmat(fac,1,length(t)));
+
+ if iflat
+ for ii=1:length(t)
+ imini=find( sig(:,ii) < minsiglevel*max(sig(:,ii)));
+ sig(imini,ii)=zeros(size(imini));
+ end
+ end
+
+ t=t';
+ sig=sig.*(repmat(angfact,1,length(t)));
+
+
+ else
+
+ if fans(9)
+ S=mdsdata(['\base::xtomo:array_001[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_001[',ststart,':',ststop,',0:19]']);
+ V=S-repmat(mean(offset),length(t),1)';
+ end
+ if fans(7)
+ S=mdsdata(['\base::xtomo:array_002[',st1,':',st2,':',sdt,',0:19]'])';
+ offset=mdsdata(['\base::xtomo:array_002[',ststart,':',ststop,',0:19]']);
+ H=S-repmat(mean(offset),length(t),1)';
+ end
+ %---- read gains of the current shot ---------------------------------------
+
+ gains=get_xtomo_gains(shot);
+ g1=gains(1:20)';
+ g2=gains(21:40)';
-return
+ %------ solid angle factors -----------------------
+
+ aom1=angfact(:,9);
+ aom2=angfact(:,7);
+
+
+ %----- calculate correcting factors ---------------------------------------
+
+ fac1=(aom1./g1);
+ fac2=(aom2./g2);
+
+ %--- result: offset-, calibration- and angular-factor corrected data -------
+
+ V=-V.*(repmat(fac1,1,length(t))); % vertical camera:
+ H=-H.*(repmat(fac2,1,length(t))); % horizontal camera:
+
+
+ sig=[H;V];
+
+ t=t';
+
+ end
+
+else
+ if (~strcmp(tag,'brief') & ~strcmp(tag,'full'))
+ disp('Only full or brief accepted as tag')
+ return
+ end
+ trace_tree=['\atlas::t_rex3_' tag ':'];
+ trace=[trace_tree 'signal_inp:p'];
+ %shot=mdsopen('eltca1::tcv_shot',shot);
+ shot=mdsopen(shot);
+ tref=mdsdata(['_tref=dim_of(' trace,'001)']); %trace :p001
+ dtref=mdsdata('_dtref = _tref[1]-_tref[0]');
+ S1=[];
+ S2=[];
+ S3=[];
+ S4=[];
+ S5=[];
+ S6=[];
+ S7=[];
+ S8=[];
+ S9=[];
+ S10=[];
+ t_1=mdsdata('_t = dim_of(\atlas::t_rex3_full:signal_inp:p001)');
+ dt1=mdsdata('_dt = _t[1]-_t[0]');
+ npts=floor(mdsdata(['_npts=(',ststop,'-(',ststart,'))/_dt']));
+
+
+
+ if isempty(t_1)
+ disp('get_xtomo_data: sorry, nothing to be found for this shot ...')
+ return
+ else
+ disp('*--------------------------------------------*')
+ disp('| getting Pentland acquisition: getting *')
+ if strcmp(tag,'brief')
+ disp('| BRIEF data from MDS *');
+ else
+ disp('| FULL data from MDS *');
+ end
+ disp('*--------------------------------------------*');
+ end
+
+
+
+ if ((dt - dtref) < 1e-7 | floor(dt/dtref) ==0)
+ step='1';
+ else
+ step =num2str(dt/dtref);
+ end
+
+
+ ind1=find( abs(tref-t1) == min(abs(tref-t1)));
+ npts1=floor(mdsdata(['_npts1=(',st2,'-(',st1,'))/_dtref']));
+ sind1=num2str(ind1);
+ sind2=num2str(npts1+ind1);
+
+ t=mdsdata(['data(_tref)[',sind1,':',sind2,':', step, ']']);
+
+
+
+
+ if fans(1)
+ channel=['001';'002';'003';'004';'005';'006';'007';'008';'009';'010';...
+ '011';'012';'013';'014';'015';'016';'017';'018';'019';'020'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':' , step,']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S1(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+
+
+
+ if fans(2)
+ channel=['021';'022';'023';'024';'025';'026';'027';'028';'029';'030';...
+ '031';'032';'033';'034';'035';'036';'037';'038';'039';'040'];
+ for i=1:20
+
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S2(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+ if fans(3)
+
+ channel=['041';'042';'043';'044';'045';'046';'047';'048';'049';'050';...
+ '051';'052';'053';'054';'055';'056';'057';'058';'059';'060'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S3(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+
+ if fans(4)
+ channel=['061';'062';'063';'064';'065';'066';'067';'068';'069';'070';...
+ '071';'072';'073';'074';'075';'076';'077';'078';'079';'080'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S4(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+ if fans(5)
+ channel=['081';'082';'083';'084';'085';'086';'087';'088';'089';'090';...
+ '091';'092';'093';'094';'095';'096';'097';'098';'099';'100'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':',step,']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S5(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+
+ if fans(6)
+ channel=['101';'102';'103';'104';'105';'106';'107';'108';'109';'110';...
+ '111';'112';'113';'114';'115';'116';'117';'118';'119';'120'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace,channel(i,:),'[',st1,':',st2,':',sdt,':',step,']'])'
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step, ']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S6(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+ if fans(7)
+ channel=['121';'122';'123';'124';'125';'126';'127';'128';'129';'130';...
+ '131';'132';'133';'134';'135';'136';'137';'138';'139';'140'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':',step,']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S7(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+ if fans(8)
+ channel=['141';'142';'143';'144';'145';'146';'147';'148';'149';'150';...
+ '151';'152';'153';'154';'155';'156';'157';'158';'159';'160'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step,']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S8(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+ if fans(9)
+ channel=['161';'162';'163';'164';'165';'166';'167';'168';'169';'170';...
+ '171';'172';'173';'174';'175';'176';'177';'178';'179';'180'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step,']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S9(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+ if fans(10)
+ % channel=['181';'182';'183';'184';'185';'186';'187';'188';'189';'190';...
+ % '191';'192';'193';'194';'195';'196';'197';'198';'199';'200'];
+
+ % this permutation takes into account some not well defined (not yet)
+ % hardware corrections. Are the gains to be permutated ?
+
+
+ channel=['182';'181';'184';'183';'186';'185';'188';'187';'190';'189';...
+ '192';'191';'194';'193';'196';'195';'198';'197';'200';'199'];
+ for i=1:20
+ % S(i,:)=mdsdata([trace, channel(i,:),'[',st1,':',st2,':',sdt,']'])';
+
+
+ S(i,:)=mdsdata(['data(',trace,channel(i,:),')[',sind1,':',sind2,':', step,']'])';
+ offset=mdsdata(['data(\atlas::t_rex3_full:signal_inp:p',channel(i,:),')[0:',num2str(npts),']' ]);
+ S10(i,:)=S(i,:)-repmat(mean(offset),length(t),1)';
+ end
+ end
+
+ sig=[S1;S2;S3;S4;S5;S6;S7;S8;S9;S10];
+
+
+ [satrow,satcol]=find(abs(sig)>satlevel);
+
+ if ~isempty(satcol)
+ i_tlimit=min(satcol(:));
+ if i_tlimit>1
+ sig=sig(:,1:i_tlimit-1);
+ t=t(1:i_tlimit-1);
+ disp(['get_xtomo_data WARNING: some channels saturated',......
+ ', t2 changed to ',sprintf('%6.4f',max(t))]);
+ else
+ sig=[];
+ t=[];
+ disp('get_xtomo_data WARNING: saturations, no data returned');
+ return
+ end
+ end
+
+
+ angfact=angfact(:,find(fans));
+ angfact=angfact(:);
+ gains=get_xtomo_gains(shot);
+ % earlier than shot xxx:
+ perm=[1:180,[180+[2,1,4,3,6,5,8,7,10,9,12,11,14,13,16,15,18,17,20,19]]];
+ gains=gains(perm);
+ iact=find(fans);
+ nact=length(iact);
+ idetec=[];
+ for k=1:nact
+ idetec=[idetec,(iact(k)-1)*20+1:iact(k)*20];
+ end
+ gains=gains(idetec);
+ gains=gains(:);
+ fac=ones(size(gains))./gains;
+
+
+ sig=sig.*(repmat(fac,1,length(t)));
+
+ if iflat
+ for ii=1:length(t)
+ imini=find( sig(:,ii) < minsiglevel*max(sig(:,ii)));
+ sig(imini,ii)=zeros(size(imini));
+ end
+ end
+
+ t=t';
+ sig=sig.*(repmat(angfact,1,length(t)));
+
+
+end
+
+mdsclose
+
+
+return
diff --git a/matlab/TCV/tcv_help_parameters.m b/matlab/TCV/tcv_help_parameters.m
index 2c6c74c0b91bc015c0558a43e33af1c0f98ec3c0..f864a08468e84d120646871535122a4e2c54b2e4 100644
--- a/matlab/TCV/tcv_help_parameters.m
+++ b/matlab/TCV/tcv_help_parameters.m
@@ -29,7 +29,8 @@ help_struct_all.cxrs_time_interval = ['cxrs: (time_interval can have several nbs
' as well'];
help_struct_all.fit_tension = ['smoothing value used in interpos fitting routine, -30 means ''30 times default value'', thus -1 often a' ...
' good value' char(10) ...
- 'cxrs: if numeric, default for all cases, if structure, default for non given fields'];
+ 'cxrs: if numeric, default for all cases, if structure, default for non given fields' char(10) ...
+ 'radcam: tension for interpos smoothing of data to have lower time samples'];
help_struct_all.time = 'eqdsk: time(s) value(s) requested, by default time=1.0s (see time_out for other requests)';
help_struct_all.time_out = ['requested time for output: data points within interval if time_out=[t1 t2], otherwise assumes series of points, uses linear interpolation in that case (default [-Inf Inf])'...
char(10) 'for sxr, mpx: only time interval provided in time_out is relevant'];
@@ -38,6 +39,7 @@ help_struct_all.cocos = ['cocos value desired in output, uses eqdsk_cocos_transf
'is wanted. See O. Sauter et al Comput. Phys. Commun. 184 (2013) 293'];
help_struct_all.nrz_out = 'Nb of radial and vertical points in output eqdsk, default is [129,129], set to [-1,-1] to get original meshes';
help_struct_all.edge = '0 (default), 1 to get edge Thomson values';
+help_struct_all.ec_inputs = '0 (default), 1 to get characterics of gyrotrons connected to each launcher: active, freq, power';
help_struct_all.fit = '0, no fit profiles, 1 (default) if fit profiles desired as well, relevant for _rho profiles. See also fit_type';
help_struct_all.fit_type = 'provenance of fitted profiles ''conf'' (default) from conf nodes, ''avg'' or ''local'' for resp. proffit: nodes';
help_struct_all.trialindx = 'value of trialindx desired to get a specific one when relevant, otherwise gets ok_trialindx, that is 1 usually';
@@ -56,17 +58,19 @@ help_struct_all.error_bar = sprintf('%s\n','for ids: choice of nodes fill in and
'''delta'' (default): only upper fill in with the abs(value) to add or subtract to data to get upper and lower values (symmetric)', ...
'''delta_with_lower'': same as delta but fill in lower node as well (with delta as well, same as upper)', ...
'''added'': add the delta values (old cpo style), so upper=data+error_bar and lower=data+error_bar');
-help_struct_all.camera = ['sxr: for MPX: ''central'', ''top'' (default), ''bottom'' or ''both'' ; ' ...
- ' for XTOMO: ''central'' (a central chord only), defaults if empty, [1 3 5] if only camera 1, 3 and 5 are desired'];
-help_struct_all.freq = '''slow'', default, lower sampling; ''fast'' full samples for both mpx and xtomo';
+help_struct_all.camera = sprintf('%s\n%s\n%s', ...
+ 'sxr: for radcam: 1 to 4 or ''top'' (default), ''upper'', ''equatorial'', ''bottom'' array or cell array ok as well;', ...
+ ' for MPX: ''central'', ''top'' (default), ''bottom'' or ''both'' ;', ...
+ ' for XTOMO: ''central'' (a central chord only), defaults if empty, [1 3 5] if only camera 1, 3 and 5 are desired');
+help_struct_all.channel = sprintf('%s\n%s\n%s', ...
+ 'radcam: chord to choose within camera interval, or simply chords, then it is re-distributed to correct camera');
+help_struct_all.freq = '''slow'', default, lower sampling (for radcam smoothing on dt=0.1ms); ''fast'' full samples for radcam, mpx and xtomo';
help_struct_all.max_adcs = 'rtc: source=''adcs'' maximum nb of adc channels loaded for each board in each active node';
help_struct_all.nfft = '512 (default) changes time resolution in spectrogram in gdat_plot for ''mhd'' request';
help_struct_all.map_eqdsk_psirz = 'eqdsk: if time array provided, maps all psi(R,Z,t) on same R,Zmesh in .data (1) or not (0, default)';
help_struct_all.write = 'eqdsk: write eqdsk while loading data (1, default) or not (0)';
%help_struct_all. = '';
-
-
if ~exist('parameter_list') || isempty(parameter_list)
help_struct = help_struct_all;
return
diff --git a/matlab/TCV/tcv_requests_mapping.m b/matlab/TCV/tcv_requests_mapping.m
index ad1bc170dab3bea172e5cffe6628196f901c8e63..04dcc1f5c8e483714b1882bb15b8e965bb07ed20 100644
--- a/matlab/TCV/tcv_requests_mapping.m
+++ b/matlab/TCV/tcv_requests_mapping.m
@@ -458,7 +458,7 @@ switch lower(data_request)
mapping.expression = ['params_eff = gdat_data.gdat_params;params_eff.data_request=''tcv_eq("surf","LIUQE.M")'';' ...
'gdat_tmp=gdat_tcv(shot,params_eff); gdat_tmp.dim = {gdat_tmp.t}; gdat_tmp.x=[]; gdat_tmp.data= gdat_tmp.data(end,:);' ...
'gdat_tmp.dimunits{1}=''s'';gdat_tmp.help=''toroidal surface of LCFS'';'];
- case 'sxr'
+ case {'sxr', 'mpx', 'radcam'}
mapping.timedim = 1;
mapping.gdat_timedim = 2;
mapping.method = 'switchcase';
@@ -583,10 +583,6 @@ switch lower(data_request)
% $$$ mapping.method = 'tdiliuqe';
% $$$ % mapping.expression = '\results::thomson:psiscatvol:foo';
% $$$ mapping.expression = '\results::thomson:psiscatvol';
- case 'mpx'
- mapping.timedim = 1;
- mapping.gdat_timedim = 2;
- mapping.method = 'switchcase';
case {'profnerho','profterho'}
mapping.timedim = 1;
mapping.label = data_request;
diff --git a/matlab/TCV_IMAS/ids2database.m b/matlab/TCV_IMAS/ids2database.m
index 40f83746b8524a2b3f38cf770fcba6147ae7ace2..eb2c2ed7f0275d6700c482f8c6f3a1a4727d2fae 100644
--- a/matlab/TCV_IMAS/ids2database.m
+++ b/matlab/TCV_IMAS/ids2database.m
@@ -1,4 +1,4 @@
-function [ids_put_status] = ids2database(shot,run,occurence,ids2put,tree_user,tree_tokamak,tree_majorversion,varargin);
+function [ids_put_status] = ids2database(shot,run,occurence,ids2put,tree_user,tree_tokamak,tree_majorversion,imas_backend,varargin);
%
% [ids_put_status] = ids2database(shot,run,occurence,ids2put,varargin);
%
@@ -7,6 +7,7 @@ function [ids_put_status] = ids2database(shot,run,occurence,ids2put,tree_user,tr
% tree_name: getenv('USER') by default, can be 'public'
% tree_tokamak: 'tcv' by default
% tree_majorversion: '3' by default
+% imas_backend: "MDSplus" or "HDF5"
%
% varargin{1}: tbd
%
@@ -16,6 +17,7 @@ ids_put_status = 0;
tree_user_default = getenv('USER');
tree_tokamak_default = 'tcv';
tree_majorversion_default = '3';
+imas_backend_default = 'MDSplus';
% initialize input parser
p = inputParser;
@@ -28,6 +30,7 @@ p.addOptional('ids2put', struct([]), @(x) (isstruct(x)));
p.addOptional('tree_user', tree_user_default, @(x) (isempty(x) || ischar(x)));
p.addOptional('tree_tokamak', tree_tokamak_default, @(x) (isempty(x) || ischar(x)));
p.addOptional('tree_majorversion', tree_majorversion_default, @(x) (ischar(x)));
+p.addOptional('imas_backend', imas_backend_default, @(x) (isempty(x) || ischar(x)));
p.parse;
defaults_ids2database = p.Results; % to keep track of defaults
@@ -53,8 +56,11 @@ elseif nargin==6
elseif nargin==7
p.parse(shot,run,occurence,ids2put,tree_user,tree_tokamak,tree_majorversion);
params = p.Results;
-elseif nargin>=8
- p.parse(shot,run,occurence,ids2put,tree_user,tree_tokamak,tree_majorversion,varargin{:});
+elseif nargin==8
+ p.parse(shot,run,occurence,ids2put,tree_user,tree_tokamak,tree_majorversion,imas_backend);
+ params = p.Results;
+elseif nargin>=9
+ p.parse(shot,run,occurence,ids2put,tree_user,tree_tokamak,tree_majorversion,imas_backend,varargin{:});
params = p.Results;
else
p.parse;
@@ -100,6 +106,19 @@ if isempty(ids_names_ok)
return
end
+if ~ismember(params_ids2database.imas_backend, {'MDSplus', 'HDF5'})
+ warning(['Unknown imas_backend: ', imas_backend, ', selecting default: ',imas_backend_default]);
+ params_ids2database.imas_backend = imas_backend_default;
+end
+
+% Get IMAS backend ID
+switch params_ids2database.imas_backend
+ case "HDF5"
+ backendid=13;
+ case "MDSplus"
+ backendid=12;
+end
+
try
%% Initialize the three
shot_is_new = 1; % seems only create is ok even if does already exist
@@ -109,10 +128,9 @@ try
shot_is_new = 0;
end
if shot_is_new
- idx = imas_create_env('ids',shot,run,0,0,params_ids2database.tree_user,params_ids2database.tree_tokamak, ...
- params_ids2database.tree_majorversion); %
+ idx = imas_create_env_backend(shot, run, params_ids2database.tree_user,params_ids2database.tree_tokamak, params_ids2database.tree_majorversion, backendid)
else
- idx = imas_open_env('ids',shot,run,params_ids2database.tree_user,params_ids2database.tree_tokamak,params_ids2database.tree_majorversion); %
+ idx = imas_open_env_backend(shot,run,params_ids2database.tree_user,params_ids2database.tree_tokamak,params_ids2database.tree_majorversion,backendid); %
end
%% Put the field
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_amns_data.m b/matlab/TCV_IMAS/ids_empty/ids_empty_amns_data.m
index c7b2fa355a63f9260334172addc05f6d48a35164..be16780d93bd199b3e949d1fb5fec5b1fa6039ab 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_amns_data.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_amns_data.m
@@ -1,9 +1,11 @@
function S = ids_empty_amns_data
% function S = ids_empty_amns_data
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'a',double(-9e+40),...
'a_error_index',int32(-999999999),...
@@ -11,13 +13,15 @@ struct(...
'a_error_upper',double(-9e+40),...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -36,12 +40,57 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})
-;}},...
+}})
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -87,7 +136,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'citation','',...
'coordinate_index',int32(-999999999),...
'label','',...
@@ -110,7 +159,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'mass',double(-9e+40),...
'mass_error_index',int32(-999999999),...
@@ -127,7 +176,7 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'provider','',...
'reactants',{{struct(...
'charge',double(-9e+40),...
@@ -148,7 +197,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'mass',double(-9e+40),...
'mass_error_index',int32(-999999999),...
@@ -165,22 +214,22 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'result_label','',...
'result_transformation',int32(-999999999),...
'result_units','',...
'source','',...
'table_dimension',int32(-999999999))
-;}},...
+}},...
'release',{{struct(...
'data_entry',{{struct(...
'description','',...
'run',int32(-999999999),...
'shot',int32(-999999999))
-;}},...
+}},...
'date','',...
'description','')
-;}},...
+}},...
'time',double([]),...
'z_n',double(-9e+40),...
'z_n_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_b_field_non_axisymmetric.m b/matlab/TCV_IMAS/ids_empty/ids_empty_b_field_non_axisymmetric.m
new file mode 100644
index 0000000000000000000000000000000000000000..a9c2f227113d7a345e53019577ddf259fb8cb45c
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_b_field_non_axisymmetric.m
@@ -0,0 +1,161 @@
+function S = ids_empty_b_field_non_axisymmetric
+% function S = ids_empty_b_field_non_axisymmetric
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'configuration','',...
+'control_surface_names',{{}},...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'time',double([]),...
+'time_slice',{{struct(...
+'control_surface',{{struct(...
+'b_field_normal',double([]),...
+'b_field_normal_error_index',int32(-999999999),...
+'b_field_normal_error_lower',double([]),...
+'b_field_normal_error_upper',double([]),...
+'b_field_normal_fourier',double([]),...
+'b_field_normal_fourier_error_index',int32(-999999999),...
+'b_field_normal_fourier_error_lower',double([]),...
+'b_field_normal_fourier_error_upper',double([]),...
+'b_field_r',double([]),...
+'b_field_r_error_index',int32(-999999999),...
+'b_field_r_error_lower',double([]),...
+'b_field_r_error_upper',double([]),...
+'b_field_tor',double([]),...
+'b_field_tor_error_index',int32(-999999999),...
+'b_field_tor_error_lower',double([]),...
+'b_field_tor_error_upper',double([]),...
+'b_field_z',double([]),...
+'b_field_z_error_index',int32(-999999999),...
+'b_field_z_error_lower',double([]),...
+'b_field_z_error_upper',double([]),...
+'n_tor',int32([]),...
+'normal_vector',struct(...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'outline',struct(...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]))
+}},...
+'field_map',struct(...
+'b_field_r',double([]),...
+'b_field_r_error_index',int32(-999999999),...
+'b_field_r_error_lower',double([]),...
+'b_field_r_error_upper',double([]),...
+'b_field_tor',double([]),...
+'b_field_tor_error_index',int32(-999999999),...
+'b_field_tor_error_lower',double([]),...
+'b_field_tor_error_upper',double([]),...
+'b_field_z',double([]),...
+'b_field_z_error_index',int32(-999999999),...
+'b_field_z_error_lower',double([]),...
+'b_field_z_error_upper',double([]),...
+'grid',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'ripple_amplitude',double([]),...
+'ripple_amplitude_error_index',int32(-999999999),...
+'ripple_amplitude_error_lower',double([]),...
+'ripple_amplitude_error_upper',double([])),...
+'time',double(-9e+40))
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_barometry.m b/matlab/TCV_IMAS/ids_empty/ids_empty_barometry.m
index b893cfeca7e17f327f41ac72e5128d1ccedaa5b1..fc0aab27ae58b7f3848aa0f2376c79519f2aca7f 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_barometry.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_barometry.m
@@ -1,19 +1,23 @@
function S = ids_empty_barometry
% function S = ids_empty_barometry
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -48,15 +52,64 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_bolometer.m b/matlab/TCV_IMAS/ids_empty/ids_empty_bolometer.m
index 6ac800749d5af7f9d1e4becd75791c9a648c5272..8ab58cd9ace4a883a1b7b323d56efc296791b969 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_bolometer.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_bolometer.m
@@ -1,9 +1,11 @@
function S = ids_empty_bolometer
% function S = ids_empty_bolometer
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'aperture',{{struct(...
@@ -85,7 +87,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'detector',struct(...
'centre',struct(...
'phi',double(-9e+40),...
@@ -225,16 +227,18 @@ struct(...
'validity_timed',struct(...
'data',int32([]),...
'time',double([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -244,12 +248,61 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'power_radiated_inside_lcfs',double([]),...
'power_radiated_inside_lcfs_error_index',int32(-999999999),...
'power_radiated_inside_lcfs_error_lower',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_bremsstrahlung_visible.m b/matlab/TCV_IMAS/ids_empty/ids_empty_bremsstrahlung_visible.m
index 96da2125bf6f1f2d81c0441cc607503e405d931e..31dedb503fcd339245dac7df8cb5db8a3f7e8f7d 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_bremsstrahlung_visible.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_bremsstrahlung_visible.m
@@ -1,9 +1,11 @@
function S = ids_empty_bremsstrahlung_visible
% function S = ids_empty_bremsstrahlung_visible
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'filter',struct(...
@@ -71,16 +73,18 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -90,10 +94,59 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_calorimetry.m b/matlab/TCV_IMAS/ids_empty/ids_empty_calorimetry.m
index 86178f8af384919bafa1dfb1a3f8d694ae278ace..16083fabe295f53a6d79bd15b31d61a86363b1b4 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_calorimetry.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_calorimetry.m
@@ -1,19 +1,23 @@
function S = ids_empty_calorimetry
% function S = ids_empty_calorimetry
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -46,7 +50,7 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'group',{{struct(...
'component',{{struct(...
'energy_cumulated',struct(...
@@ -105,18 +109,67 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'identifier','',...
'name','')
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_camera_ir.m b/matlab/TCV_IMAS/ids_empty/ids_empty_camera_ir.m
index e9346d45733df02ddbc9ba59ab9baf423f97cf2f..f7a0effa225067ed728494456c227c01846cbb28 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_camera_ir.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_camera_ir.m
@@ -1,9 +1,11 @@
function S = ids_empty_camera_ir
% function S = ids_empty_camera_ir
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'calibration',struct(...
'luminance_to_temperature',int32([]),...
@@ -13,31 +15,337 @@ struct(...
'transmission_window',int32([])),...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
'repository','',...
'version',''),...
+'fibre_bundle',struct(...
+'fibre_positions',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'fibre_radius',double(-9e+40),...
+'fibre_radius_error_index',int32(-999999999),...
+'fibre_radius_error_lower',double(-9e+40),...
+'fibre_radius_error_upper',double(-9e+40),...
+'geometry',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))),...
'frame',{{struct(...
-'image_raw',int32([]),...
+'surface_temperature',double([]),...
+'surface_temperature_error_index',int32(-999999999),...
+'surface_temperature_error_lower',double([]),...
+'surface_temperature_error_upper',double([]),...
+'time',double(-9e+40))
+}},...
+'frame_analysis',{{struct(...
+'distance_separatrix_midplane',double([]),...
+'distance_separatrix_midplane_error_index',int32(-999999999),...
+'distance_separatrix_midplane_error_lower',double([]),...
+'distance_separatrix_midplane_error_upper',double([]),...
+'power_flux_parallel',double([]),...
+'power_flux_parallel_error_index',int32(-999999999),...
+'power_flux_parallel_error_lower',double([]),...
+'power_flux_parallel_error_upper',double([]),...
+'sol_heat_decay_length',double(-9e+40),...
+'sol_heat_decay_length_error_index',int32(-999999999),...
+'sol_heat_decay_length_error_lower',double(-9e+40),...
+'sol_heat_decay_length_error_upper',double(-9e+40),...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'name','',...
+'optical_element',{{struct(...
+'back_surface',struct(...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40)),...
+'front_surface',struct(...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40)),...
+'geometry',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'material_properties',struct(...
+'extinction_coefficient',double([]),...
+'extinction_coefficient_error_index',int32(-999999999),...
+'extinction_coefficient_error_lower',double([]),...
+'extinction_coefficient_error_upper',double([]),...
+'refractive_index',double([]),...
+'refractive_index_error_index',int32(-999999999),...
+'refractive_index_error_lower',double([]),...
+'refractive_index_error_upper',double([]),...
+'roughness',double([]),...
+'roughness_error_index',int32(-999999999),...
+'roughness_error_lower',double([]),...
+'roughness_error_upper',double([]),...
+'transmission_coefficient',double([]),...
+'transmission_coefficient_error_index',int32(-999999999),...
+'transmission_coefficient_error_lower',double([]),...
+'transmission_coefficient_error_upper',double([]),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([])),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''))
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_camera_visible.m b/matlab/TCV_IMAS/ids_empty/ids_empty_camera_visible.m
index 32cf9f234f852bf335578cd83324bec2e38a5c42..7276ab216af4b712a1d4d7ee2c33fb10002025ff 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_camera_visible.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_camera_visible.m
@@ -1,9 +1,11 @@
function S = ids_empty_camera_visible
% function S = ids_empty_camera_visible
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'aperture',{{struct(...
@@ -85,8 +87,9 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'detector',{{struct(...
+'columns_n',int32(-999999999),...
'counts_to_radiance',double([]),...
'counts_to_radiance_error_index',int32(-999999999),...
'counts_to_radiance_error_lower',double([]),...
@@ -102,13 +105,30 @@ struct(...
'radiance_error_lower',double([]),...
'radiance_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'geometry_matrix',struct(...
+'emission_grid',struct(...
+'dim1',double([]),...
+'dim1_error_index',int32(-999999999),...
+'dim1_error_lower',double([]),...
+'dim1_error_upper',double([]),...
+'dim2',double([]),...
+'dim2_error_index',int32(-999999999),...
+'dim2_error_lower',double([]),...
+'dim2_error_upper',double([]),...
+'dim3',double([]),...
+'dim3_error_index',int32(-999999999),...
+'dim3_error_lower',double([]),...
+'dim3_error_upper',double([]),...
+'grid_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name','')),...
+'interpolated',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
-'emission_grid',struct(...
'phi',double([]),...
'phi_error_index',int32(-999999999),...
'phi_error_lower',double([]),...
@@ -121,7 +141,23 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double([]),...
'z_error_upper',double([])),...
-'voxel_map',int32([])),...
+'voxel_map',int32([]),...
+'voxels_n',int32(-999999999),...
+'with_reflections',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'pixel_indices',int32([]),...
+'voxel_indices',int32([])),...
+'without_reflections',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'pixel_indices',int32([]),...
+'voxel_indices',int32([]))),...
+'lines_n',int32(-999999999),...
'noise',double(-9e+40),...
'noise_error_index',int32(-999999999),...
'noise_error_lower',double(-9e+40),...
@@ -142,8 +178,241 @@ struct(...
'wavelength_upper_error_index',int32(-999999999),...
'wavelength_upper_error_lower',double(-9e+40),...
'wavelength_upper_error_upper',double(-9e+40))
-;}},...
+}},...
+'fibre_bundle',struct(...
+'fibre_positions',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'fibre_radius',double(-9e+40),...
+'fibre_radius_error_index',int32(-999999999),...
+'fibre_radius_error_lower',double(-9e+40),...
+'fibre_radius_error_upper',double(-9e+40),...
+'geometry',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))),...
'name','',...
+'optical_element',{{struct(...
+'back_surface',struct(...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40)),...
+'front_surface',struct(...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40)),...
+'geometry',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'material_properties',struct(...
+'extinction_coefficient',double([]),...
+'extinction_coefficient_error_index',int32(-999999999),...
+'extinction_coefficient_error_lower',double([]),...
+'extinction_coefficient_error_upper',double([]),...
+'refractive_index',double([]),...
+'refractive_index_error_index',int32(-999999999),...
+'refractive_index_error_lower',double([]),...
+'refractive_index_error_upper',double([]),...
+'roughness',double([]),...
+'roughness_error_index',int32(-999999999),...
+'roughness_error_lower',double([]),...
+'roughness_error_upper',double([]),...
+'transmission_coefficient',double([]),...
+'transmission_coefficient_error_index',int32(-999999999),...
+'transmission_coefficient_error_lower',double([]),...
+'transmission_coefficient_error_upper',double([]),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([])),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''))
+}},...
'viewing_angle_alpha_bounds',double([]),...
'viewing_angle_alpha_bounds_error_index',int32(-999999999),...
'viewing_angle_alpha_bounds_error_lower',double([]),...
@@ -152,16 +421,18 @@ struct(...
'viewing_angle_beta_bounds_error_index',int32(-999999999),...
'viewing_angle_beta_bounds_error_lower',double([]),...
'viewing_angle_beta_bounds_error_upper',double([]))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -171,11 +442,60 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'name','',...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_camera_x_rays.m b/matlab/TCV_IMAS/ids_empty/ids_empty_camera_x_rays.m
new file mode 100644
index 0000000000000000000000000000000000000000..318a307220dbf8ae6683441387afbc369c3281f9
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_camera_x_rays.m
@@ -0,0 +1,425 @@
+function S = ids_empty_camera_x_rays
+% function S = ids_empty_camera_x_rays
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'aperture',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'camera',struct(...
+'camera_dimensions',double([]),...
+'camera_dimensions_error_index',int32(-999999999),...
+'camera_dimensions_error_lower',double([]),...
+'camera_dimensions_error_upper',double([]),...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'identifier','',...
+'line_of_sight',struct(...
+'first_point',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'second_point',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))),...
+'pixel_dimensions',double([]),...
+'pixel_dimensions_error_index',int32(-999999999),...
+'pixel_dimensions_error_lower',double([]),...
+'pixel_dimensions_error_upper',double([]),...
+'pixel_position',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'pixels_n',int32([]),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'detector_humidity',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'detector_temperature',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'energy_configuration_name','',...
+'energy_threshold_lower',double([]),...
+'energy_threshold_lower_error_index',int32(-999999999),...
+'energy_threshold_lower_error_lower',double([]),...
+'energy_threshold_lower_error_upper',double([]),...
+'exposure_time',double(-9e+40),...
+'exposure_time_error_index',int32(-999999999),...
+'exposure_time_error_lower',double(-9e+40),...
+'exposure_time_error_upper',double(-9e+40),...
+'filter_window',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'geometry_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'identifier','',...
+'material',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'photon_absorption',double([]),...
+'photon_absorption_error_index',int32(-999999999),...
+'photon_absorption_error_lower',double([]),...
+'photon_absorption_error_upper',double([]),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40),...
+'wavelength_lower',double(-9e+40),...
+'wavelength_lower_error_index',int32(-999999999),...
+'wavelength_lower_error_lower',double(-9e+40),...
+'wavelength_lower_error_upper',double(-9e+40),...
+'wavelength_upper',double(-9e+40),...
+'wavelength_upper_error_index',int32(-999999999),...
+'wavelength_upper_error_lower',double(-9e+40),...
+'wavelength_upper_error_upper',double(-9e+40),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([]),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'frame',{{struct(...
+'counts_n',int32([]),...
+'time',double(-9e+40))
+}},...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'name','',...
+'photon_energy',double([]),...
+'photon_energy_error_index',int32(-999999999),...
+'photon_energy_error_lower',double([]),...
+'photon_energy_error_upper',double([]),...
+'pixel_status',int32([]),...
+'quantum_efficiency',double([]),...
+'quantum_efficiency_error_index',int32(-999999999),...
+'quantum_efficiency_error_lower',double([]),...
+'quantum_efficiency_error_upper',double([]),...
+'readout_time',double(-9e+40),...
+'readout_time_error_index',int32(-999999999),...
+'readout_time_error_lower',double(-9e+40),...
+'readout_time_error_upper',double(-9e+40),...
+'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_charge_exchange.m b/matlab/TCV_IMAS/ids_empty/ids_empty_charge_exchange.m
index 23f769eea93d40c457e0eebb0c22bcc8b4e1b937..f2b743835976a87c344e84ac663bfc4cca79bfd8 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_charge_exchange.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_charge_exchange.m
@@ -1,9 +1,11 @@
function S = ids_empty_charge_exchange
% function S = ids_empty_charge_exchange
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'aperture',struct(...
'centre',struct(...
@@ -176,7 +178,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'ion_fast',{{struct(...
'a',double(-9e+40),...
'a_error_index',int32(-999999999),...
@@ -205,7 +207,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'momentum_tor',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -285,7 +287,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'radiance_calibration',double([]),...
'radiance_calibration_date','',...
'radiance_calibration_error_index',int32(-999999999),...
@@ -312,7 +314,7 @@ struct(...
'wavelengths_error_index',int32(-999999999),...
'wavelengths_error_lower',double([]),...
'wavelengths_error_upper',double([]))
-;}},...
+}},...
't_i_average',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -343,16 +345,18 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -370,10 +374,59 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_coils_non_axisymmetric.m b/matlab/TCV_IMAS/ids_empty/ids_empty_coils_non_axisymmetric.m
index cb719f1a66ea73ce7e15b653a87679e30b80934c..55f95fc6c8af3bb86f4ebb1826947b1d17dbd20d 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_coils_non_axisymmetric.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_coils_non_axisymmetric.m
@@ -1,10 +1,28 @@
function S = ids_empty_coils_non_axisymmetric
% function S = ids_empty_coils_non_axisymmetric
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
'coil',{{struct(...
'conductor',{{struct(...
'cross_section',struct(...
@@ -91,7 +109,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'current',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -114,15 +132,64 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_controllers.m b/matlab/TCV_IMAS/ids_empty/ids_empty_controllers.m
index 5873b2edee62a566dae25ae32a0c9eedc072c679..22ebf4f2947c5e47ecb9e20dc7e764c5447666bd 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_controllers.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_controllers.m
@@ -1,19 +1,23 @@
function S = ids_empty_controllers
% function S = ids_empty_controllers
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,6 +27,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -104,7 +153,7 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'state_names',{{}}))
-;}},...
+}},...
'nonlinear_controller',{{struct(...
'controller_class','',...
'description','',...
@@ -124,5 +173,5 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_core_instant_changes.m b/matlab/TCV_IMAS/ids_empty/ids_empty_core_instant_changes.m
index 6bb1b5d89e11a0919d9a39e4d9c552654beafcc5..81200d881ca237c50e54a2e93f9a8c3a97e19574 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_core_instant_changes.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_core_instant_changes.m
@@ -1,9 +1,11 @@
function S = ids_empty_core_instant_changes
% function S = ids_empty_core_instant_changes
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'change',{{struct(...
'identifier',struct(...
@@ -285,7 +287,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -438,7 +440,7 @@ struct(...
'z_square_average_error_index',int32(-999999999),...
'z_square_average_error_lower',double(-9e+40),...
'z_square_average_error_upper',double(-9e+40))
-;}},...
+}},...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
@@ -521,7 +523,7 @@ struct(...
'z_ion_square_1d_error_index',int32(-999999999),...
'z_ion_square_1d_error_lower',double([]),...
'z_ion_square_1d_error_upper',double([]))
-;}},...
+}},...
'j_bootstrap',double([]),...
'j_bootstrap_error_index',int32(-999999999),...
'j_bootstrap_error_lower',double([]),...
@@ -585,7 +587,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'multiple_states_flag',int32(-999999999),...
@@ -670,7 +672,7 @@ struct(...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}},...
+}},...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
@@ -696,7 +698,7 @@ struct(...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
'toroidal_error_upper',double([])))
-;}},...
+}},...
'phi_potential',double([]),...
'phi_potential_error_index',int32(-999999999),...
'phi_potential_error_lower',double([]),...
@@ -806,17 +808,19 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double([]),...
'weight_error_upper',double([])))
-;}})
-;}},...
+}})
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -826,6 +830,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_core_profiles.m b/matlab/TCV_IMAS/ids_empty/ids_empty_core_profiles.m
index c4cf20c5045d0860eab5659e1a07f8015fa26bd2..e49d0947e3166c09841dedb5d8bfd44a2d583995 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_core_profiles.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_core_profiles.m
@@ -1,19 +1,23 @@
function S = ids_empty_core_profiles
% function S = ids_empty_core_profiles
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -40,10 +44,28 @@ struct(...
'current_non_inductive_error_index',int32(-999999999),...
'current_non_inductive_error_lower',double([]),...
'current_non_inductive_error_upper',double([]),...
+'ejima',double([]),...
+'ejima_error_index',int32(-999999999),...
+'ejima_error_lower',double([]),...
+'ejima_error_upper',double([]),...
'energy_diamagnetic',double([]),...
'energy_diamagnetic_error_index',int32(-999999999),...
'energy_diamagnetic_error_lower',double([]),...
'energy_diamagnetic_error_upper',double([]),...
+'ion',{{struct(...
+'n_i_volume_average',double([]),...
+'n_i_volume_average_error_index',int32(-999999999),...
+'n_i_volume_average_error_lower',double([]),...
+'n_i_volume_average_error_upper',double([]),...
+'t_i_volume_average',double([]),...
+'t_i_volume_average_error_index',int32(-999999999),...
+'t_i_volume_average_error_lower',double([]),...
+'t_i_volume_average_error_upper',double([]))
+}},...
+'ion_time_slice',double(-9e+40),...
+'ion_time_slice_error_index',int32(-999999999),...
+'ion_time_slice_error_lower',double(-9e+40),...
+'ion_time_slice_error_upper',double(-9e+40),...
'ip',double([]),...
'ip_error_index',int32(-999999999),...
'ip_error_lower',double([]),...
@@ -56,6 +78,26 @@ struct(...
'li_error_index',int32(-999999999),...
'li_error_lower',double([]),...
'li_error_upper',double([]),...
+'n_e_volume_average',double([]),...
+'n_e_volume_average_error_index',int32(-999999999),...
+'n_e_volume_average_error_lower',double([]),...
+'n_e_volume_average_error_upper',double([]),...
+'resistive_psi_losses',double([]),...
+'resistive_psi_losses_error_index',int32(-999999999),...
+'resistive_psi_losses_error_lower',double([]),...
+'resistive_psi_losses_error_upper',double([]),...
+'t_e_peaking',double([]),...
+'t_e_peaking_error_index',int32(-999999999),...
+'t_e_peaking_error_lower',double([]),...
+'t_e_peaking_error_upper',double([]),...
+'t_e_volume_average',double([]),...
+'t_e_volume_average_error_index',int32(-999999999),...
+'t_e_volume_average_error_lower',double([]),...
+'t_e_volume_average_error_upper',double([]),...
+'t_i_average_peaking',double([]),...
+'t_i_average_peaking_error_index',int32(-999999999),...
+'t_i_average_peaking_error_lower',double([]),...
+'t_i_average_peaking_error_upper',double([]),...
'v_loop',double([]),...
'v_loop_error_index',int32(-999999999),...
'v_loop_error_lower',double([]),...
@@ -68,6 +110,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -349,7 +436,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -502,7 +589,7 @@ struct(...
'z_square_average_error_index',int32(-999999999),...
'z_square_average_error_lower',double(-9e+40),...
'z_square_average_error_upper',double(-9e+40))
-;}},...
+}},...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
@@ -585,7 +672,7 @@ struct(...
'z_ion_square_1d_error_index',int32(-999999999),...
'z_ion_square_1d_error_lower',double([]),...
'z_ion_square_1d_error_upper',double([]))
-;}},...
+}},...
'j_bootstrap',double([]),...
'j_bootstrap_error_index',int32(-999999999),...
'j_bootstrap_error_lower',double([]),...
@@ -649,7 +736,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'multiple_states_flag',int32(-999999999),...
@@ -734,7 +821,7 @@ struct(...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}},...
+}},...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
@@ -760,7 +847,7 @@ struct(...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
'toroidal_error_upper',double([])))
-;}},...
+}},...
'phi_potential',double([]),...
'phi_potential_error_index',int32(-999999999),...
'phi_potential_error_lower',double([]),...
@@ -870,7 +957,209 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double([]),...
'weight_error_upper',double([])))
-;}},...
+}},...
+'profiles_2d',{{struct(...
+'grid',struct(...
+'dim1',double([]),...
+'dim1_error_index',int32(-999999999),...
+'dim1_error_lower',double([]),...
+'dim1_error_upper',double([]),...
+'dim2',double([]),...
+'dim2_error_index',int32(-999999999),...
+'dim2_error_lower',double([]),...
+'dim2_error_upper',double([]),...
+'volume_element',double([]),...
+'volume_element_error_index',int32(-999999999),...
+'volume_element_error_lower',double([]),...
+'volume_element_error_upper',double([])),...
+'grid_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'ion',{{struct(...
+'density',double([]),...
+'density_error_index',int32(-999999999),...
+'density_error_lower',double([]),...
+'density_error_upper',double([]),...
+'density_fast',double([]),...
+'density_fast_error_index',int32(-999999999),...
+'density_fast_error_lower',double([]),...
+'density_fast_error_upper',double([]),...
+'density_thermal',double([]),...
+'density_thermal_error_index',int32(-999999999),...
+'density_thermal_error_lower',double([]),...
+'density_thermal_error_upper',double([]),...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'ion_index',int32(-999999999),...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'pressure',double([]),...
+'pressure_error_index',int32(-999999999),...
+'pressure_error_lower',double([]),...
+'pressure_error_upper',double([]),...
+'pressure_fast_parallel',double([]),...
+'pressure_fast_parallel_error_index',int32(-999999999),...
+'pressure_fast_parallel_error_lower',double([]),...
+'pressure_fast_parallel_error_upper',double([]),...
+'pressure_fast_perpendicular',double([]),...
+'pressure_fast_perpendicular_error_index',int32(-999999999),...
+'pressure_fast_perpendicular_error_lower',double([]),...
+'pressure_fast_perpendicular_error_upper',double([]),...
+'pressure_thermal',double([]),...
+'pressure_thermal_error_index',int32(-999999999),...
+'pressure_thermal_error_lower',double([]),...
+'pressure_thermal_error_upper',double([]),...
+'rotation_frequency_tor',double([]),...
+'rotation_frequency_tor_error_index',int32(-999999999),...
+'rotation_frequency_tor_error_lower',double([]),...
+'rotation_frequency_tor_error_upper',double([]),...
+'state',{{struct(...
+'density',double([]),...
+'density_error_index',int32(-999999999),...
+'density_error_lower',double([]),...
+'density_error_upper',double([]),...
+'density_fast',double([]),...
+'density_fast_error_index',int32(-999999999),...
+'density_fast_error_lower',double([]),...
+'density_fast_error_upper',double([]),...
+'density_thermal',double([]),...
+'density_thermal_error_index',int32(-999999999),...
+'density_thermal_error_lower',double([]),...
+'density_thermal_error_upper',double([]),...
+'electron_configuration','',...
+'ionisation_potential',double(-9e+40),...
+'ionisation_potential_error_index',int32(-999999999),...
+'ionisation_potential_error_lower',double(-9e+40),...
+'ionisation_potential_error_upper',double(-9e+40),...
+'label','',...
+'pressure',double([]),...
+'pressure_error_index',int32(-999999999),...
+'pressure_error_lower',double([]),...
+'pressure_error_upper',double([]),...
+'pressure_fast_parallel',double([]),...
+'pressure_fast_parallel_error_index',int32(-999999999),...
+'pressure_fast_parallel_error_lower',double([]),...
+'pressure_fast_parallel_error_upper',double([]),...
+'pressure_fast_perpendicular',double([]),...
+'pressure_fast_perpendicular_error_index',int32(-999999999),...
+'pressure_fast_perpendicular_error_lower',double([]),...
+'pressure_fast_perpendicular_error_upper',double([]),...
+'pressure_thermal',double([]),...
+'pressure_thermal_error_index',int32(-999999999),...
+'pressure_thermal_error_lower',double([]),...
+'pressure_thermal_error_upper',double([]),...
+'rotation_frequency_tor',double([]),...
+'rotation_frequency_tor_error_index',int32(-999999999),...
+'rotation_frequency_tor_error_lower',double([]),...
+'rotation_frequency_tor_error_upper',double([]),...
+'temperature',double([]),...
+'temperature_error_index',int32(-999999999),...
+'temperature_error_lower',double([]),...
+'temperature_error_upper',double([]),...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','',...
+'z_average',double(-9e+40),...
+'z_average_error_index',int32(-999999999),...
+'z_average_error_lower',double(-9e+40),...
+'z_average_error_upper',double(-9e+40),...
+'z_max',double(-9e+40),...
+'z_max_error_index',int32(-999999999),...
+'z_max_error_lower',double(-9e+40),...
+'z_max_error_upper',double(-9e+40),...
+'z_min',double(-9e+40),...
+'z_min_error_index',int32(-999999999),...
+'z_min_error_lower',double(-9e+40),...
+'z_min_error_upper',double(-9e+40),...
+'z_square_average',double(-9e+40),...
+'z_square_average_error_index',int32(-999999999),...
+'z_square_average_error_lower',double(-9e+40),...
+'z_square_average_error_upper',double(-9e+40))
+}},...
+'temperature',double([]),...
+'temperature_error_index',int32(-999999999),...
+'temperature_error_lower',double([]),...
+'temperature_error_upper',double([]),...
+'velocity',struct(...
+'diamagnetic',double([]),...
+'diamagnetic_error_index',int32(-999999999),...
+'diamagnetic_error_lower',double([]),...
+'diamagnetic_error_upper',double([]),...
+'parallel',double([]),...
+'parallel_error_index',int32(-999999999),...
+'parallel_error_lower',double([]),...
+'parallel_error_upper',double([]),...
+'poloidal',double([]),...
+'poloidal_error_index',int32(-999999999),...
+'poloidal_error_lower',double([]),...
+'poloidal_error_upper',double([]),...
+'radial',double([]),...
+'radial_error_index',int32(-999999999),...
+'radial_error_lower',double([]),...
+'radial_error_upper',double([]),...
+'toroidal',double([]),...
+'toroidal_error_index',int32(-999999999),...
+'toroidal_error_lower',double([]),...
+'toroidal_error_upper',double([])),...
+'z_ion',double(-9e+40),...
+'z_ion_error_index',int32(-999999999),...
+'z_ion_error_lower',double(-9e+40),...
+'z_ion_error_upper',double(-9e+40))
+}},...
+'momentum_tor',double([]),...
+'momentum_tor_error_index',int32(-999999999),...
+'momentum_tor_error_lower',double([]),...
+'momentum_tor_error_upper',double([]),...
+'n_i_thermal_total',double([]),...
+'n_i_thermal_total_error_index',int32(-999999999),...
+'n_i_thermal_total_error_lower',double([]),...
+'n_i_thermal_total_error_upper',double([]),...
+'n_i_total_over_n_e',double([]),...
+'n_i_total_over_n_e_error_index',int32(-999999999),...
+'n_i_total_over_n_e_error_lower',double([]),...
+'n_i_total_over_n_e_error_upper',double([]),...
+'pressure_ion_total',double([]),...
+'pressure_ion_total_error_index',int32(-999999999),...
+'pressure_ion_total_error_lower',double([]),...
+'pressure_ion_total_error_upper',double([]),...
+'pressure_parallel',double([]),...
+'pressure_parallel_error_index',int32(-999999999),...
+'pressure_parallel_error_lower',double([]),...
+'pressure_parallel_error_upper',double([]),...
+'pressure_perpendicular',double([]),...
+'pressure_perpendicular_error_index',int32(-999999999),...
+'pressure_perpendicular_error_lower',double([]),...
+'pressure_perpendicular_error_upper',double([]),...
+'pressure_thermal',double([]),...
+'pressure_thermal_error_index',int32(-999999999),...
+'pressure_thermal_error_lower',double([]),...
+'pressure_thermal_error_upper',double([]),...
+'t_i_average',double([]),...
+'t_i_average_error_index',int32(-999999999),...
+'t_i_average_error_lower',double([]),...
+'t_i_average_error_upper',double([]),...
+'time',double(-9e+40),...
+'zeff',double([]),...
+'zeff_error_index',int32(-999999999),...
+'zeff_error_lower',double([]),...
+'zeff_error_upper',double([]))
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_core_sources.m b/matlab/TCV_IMAS/ids_empty/ids_empty_core_sources.m
index 215732c9ae5e74c6c7397b924d17ef609214d048..289969544bf092ad33e2cf0893adf8c60a7c52b4 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_core_sources.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_core_sources.m
@@ -1,19 +1,23 @@
function S = ids_empty_core_sources
% function S = ids_empty_core_sources
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,6 +27,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -61,7 +110,7 @@ struct(...
'total_ion_power_error_index',int32(-999999999),...
'total_ion_power_error_lower',double(-9e+40),...
'total_ion_power_error_upper',double(-9e+40))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -162,7 +211,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',double([]),...
'energy_decomposed',struct(...
'explicit_part',double([]),...
@@ -269,12 +318,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'j_parallel',double([]),...
'j_parallel_error_index',int32(-999999999),...
'j_parallel_error_lower',double([]),...
@@ -302,7 +351,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',double([]),...
'energy_error_index',int32(-999999999),...
'energy_error_lower',double([]),...
@@ -334,8 +383,8 @@ struct(...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}})
-;}},...
+}})
+}},...
'time',double(-9e+40),...
'torque_tor_inside',double([]),...
'torque_tor_inside_error_index',int32(-999999999),...
@@ -358,7 +407,7 @@ struct(...
'total_ion_power_inside_error_index',int32(-999999999),...
'total_ion_power_inside_error_lower',double([]),...
'total_ion_power_inside_error_upper',double([]))
-;}},...
+}},...
'species',struct(...
'ion',struct(...
'element',{{struct(...
@@ -375,7 +424,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -412,7 +461,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -430,7 +479,7 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name','')))
-;}},...
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_core_transport.m b/matlab/TCV_IMAS/ids_empty/ids_empty_core_transport.m
index 89cc177e463082cba685a35d8e38800e9fc8b8e3..6de9300c5543b0e3170346fcda0da946f65d2a27 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_core_transport.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_core_transport.m
@@ -1,19 +1,23 @@
function S = ids_empty_core_transport
% function S = ids_empty_core_transport
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,6 +27,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -32,6 +81,7 @@ struct(...
'model',{{struct(...
'code',struct(...
'commit','',...
+'description','',...
'name','',...
'output_flag',struct(...
'data',int32([]),...
@@ -210,7 +260,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',struct(...
'd',double([]),...
'd_error_index',int32(-999999999),...
@@ -459,12 +509,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'momentum_tor',struct(...
'd',double([]),...
'd_error_index',int32(-999999999),...
@@ -493,7 +543,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',struct(...
'd',double([]),...
'd_error_index',int32(-999999999),...
@@ -557,8 +607,8 @@ struct(...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}})
-;}},...
+}})
+}},...
'time',double(-9e+40),...
'total_ion_energy',struct(...
'd',double([]),...
@@ -573,8 +623,8 @@ struct(...
'v_error_index',int32(-999999999),...
'v_error_lower',double([]),...
'v_error_upper',double([])))
-;}})
-;}},...
+}})
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_cryostat.m b/matlab/TCV_IMAS/ids_empty/ids_empty_cryostat.m
index 5d34061d0827219f985dfc76390dc55ff549b6f3..feda5390f6c596e61928f044cd623409b3c26bc1 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_cryostat.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_cryostat.m
@@ -1,19 +1,23 @@
function S = ids_empty_cryostat
% function S = ids_empty_cryostat
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -91,10 +95,10 @@ struct(...
'resistivity_error_index',int32(-999999999),...
'resistivity_error_lower',double(-9e+40),...
'resistivity_error_upper',double(-9e+40))
-;}},...
+}},...
'identifier','',...
'name','')
-;}}),...
+}}),...
'thermal_shield',struct(...
'type',struct(...
'description','',...
@@ -166,15 +170,60 @@ struct(...
'resistivity_error_index',int32(-999999999),...
'resistivity_error_lower',double(-9e+40),...
'resistivity_error_upper',double(-9e+40))
-;}},...
+}},...
'identifier','',...
'name','')
-;}}))
-;}},...
+}}))
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_description.m b/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_description.m
index 1d5e7efbd9381a871ce99bd8374f0d955b629542..2fd620c26f75c2288aced30a9541df66956af6dc 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_description.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_description.m
@@ -1,9 +1,11 @@
function S = ids_empty_dataset_description
% function S = ids_empty_dataset_description
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'data_entry',struct(...
'machine','',...
@@ -16,6 +18,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_fair.m b/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_fair.m
index 1f3b80274ec082e90904fc0c46f0f4dc3a4acfe9..9cfe89fcdd866a921747fd6d53525c9272aa2916 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_fair.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_dataset_fair.m
@@ -1,15 +1,62 @@
function S = ids_empty_dataset_fair
% function S = ids_empty_dataset_fair
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'identifier','',...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_disruption.m b/matlab/TCV_IMAS/ids_empty/ids_empty_disruption.m
index 29b3267876cbf9a31b79431e469bd31f1ff8ad64..c76ee1a8ecbdb24ca1c61f4a54deb0a98c52eaec 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_disruption.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_disruption.m
@@ -1,19 +1,23 @@
function S = ids_empty_disruption
% function S = ids_empty_disruption
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -105,13 +109,58 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -169,7 +218,7 @@ struct(...
'power_density_radiative_losses_error_lower',double([]),...
'power_density_radiative_losses_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_distribution_sources.m b/matlab/TCV_IMAS/ids_empty/ids_empty_distribution_sources.m
index d3759106fb5c951a97428fb11751ae1131bb0561..5c8d20017b3c0f40f56a2eb8441e662155287cea 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_distribution_sources.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_distribution_sources.m
@@ -1,19 +1,23 @@
function S = ids_empty_distribution_sources
% function S = ids_empty_distribution_sources
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,6 +27,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -56,15 +105,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -82,11 +131,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -98,12 +148,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -112,9 +170,9 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}}),...
+}})
+}})
+}}),...
'particles',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -126,9 +184,9 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'global_quantities',{{struct(...
'particles',double(-9e+40),...
'particles_error_index',int32(-999999999),...
@@ -156,24 +214,44 @@ struct(...
'torque_tor_error_index',int32(-999999999),...
'torque_tor_error_lower',double(-9e+40),...
'torque_tor_error_upper',double(-9e+40))
-;}},...
+}},...
'gyro_type',int32(-999999999),...
'markers',{{struct(...
'coordinate_identifier',{{struct(...
'description','',...
'index',int32(-999999999),...
'name','')
-;}},...
+}},...
+'orbit_integrals',struct(...
+'bounce_harmonics',int32([]),...
+'expressions',{{}},...
+'m_pol',int32([]),...
+'n_tor',int32([]),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([])),...
+'orbit_integrals_instant',struct(...
+'expressions',{{}},...
+'time_orbit',double([]),...
+'time_orbit_error_index',int32(-999999999),...
+'time_orbit_error_lower',double([]),...
+'time_orbit_error_upper',double([]),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([])),...
'positions',double([]),...
'positions_error_index',int32(-999999999),...
'positions_error_lower',double([]),...
'positions_error_upper',double([]),...
'time',double(-9e+40),...
+'toroidal_mode',int32(-999999999),...
'weights',double([]),...
'weights_error_index',int32(-999999999),...
'weights_error_lower',double([]),...
'weights_error_upper',double([]))
-;}},...
+}},...
'process',{{struct(...
'nbi_beamlets_group',int32(-999999999),...
'nbi_energy',struct(...
@@ -189,7 +267,7 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'profiles_1d',{{struct(...
'energy',double([]),...
'energy_error_index',int32(-999999999),...
@@ -241,7 +319,7 @@ struct(...
'particles_error_lower',double([]),...
'particles_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'species',struct(...
'ion',struct(...
'element',{{struct(...
@@ -258,7 +336,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -295,7 +373,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -313,7 +391,7 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name','')))
-;}},...
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_distributions.m b/matlab/TCV_IMAS/ids_empty/ids_empty_distributions.m
index c63a4e154915716c16ef7c8421f973dd53237e62..ad1c9761b606f7c1d2979d6a72da4c66271177c0 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_distributions.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_distributions.m
@@ -1,19 +1,23 @@
function S = ids_empty_distributions
% function S = ids_empty_distributions
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -33,8 +37,22 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})
-;}},...
+}})
+}},...
+'expansion_fd3v',{{struct(...
+'grid_subset',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}})
+}},...
'grid',struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -50,15 +68,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -76,11 +94,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -92,12 +111,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -106,15 +133,15 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}}),...
+}})
+}})
+}}),...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
'temperature_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'global_quantities',{{struct(...
'collisions',struct(...
'electrons',struct(...
@@ -149,7 +176,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -193,7 +220,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double(-9e+40),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double(-9e+40),...
@@ -206,7 +233,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'current_tor',double(-9e+40),...
'current_tor_error_index',int32(-999999999),...
'current_tor_error_lower',double(-9e+40),...
@@ -251,7 +278,7 @@ struct(...
'torque_tor_error_index',int32(-999999999),...
'torque_tor_error_lower',double(-9e+40),...
'torque_tor_error_upper',double(-9e+40))
-;}},...
+}},...
'thermalisation',struct(...
'particles',double(-9e+40),...
'particles_error_index',int32(-999999999),...
@@ -270,7 +297,7 @@ struct(...
'torque_tor_j_radial_error_index',int32(-999999999),...
'torque_tor_j_radial_error_lower',double(-9e+40),...
'torque_tor_j_radial_error_upper',double(-9e+40))
-;}},...
+}},...
'gyro_type',int32(-999999999),...
'is_delta_f',int32(-999999999),...
'markers',{{struct(...
@@ -278,17 +305,37 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name','')
-;}},...
+}},...
+'orbit_integrals',struct(...
+'bounce_harmonics',int32([]),...
+'expressions',{{}},...
+'m_pol',int32([]),...
+'n_tor',int32([]),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([])),...
+'orbit_integrals_instant',struct(...
+'expressions',{{}},...
+'time_orbit',double([]),...
+'time_orbit_error_index',int32(-999999999),...
+'time_orbit_error_lower',double([]),...
+'time_orbit_error_upper',double([]),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([])),...
'positions',double([]),...
'positions_error_index',int32(-999999999),...
'positions_error_lower',double([]),...
'positions_error_upper',double([]),...
'time',double(-9e+40),...
+'toroidal_mode',int32(-999999999),...
'weights',double([]),...
'weights_error_index',int32(-999999999),...
'weights_error_lower',double([]),...
'weights_error_upper',double([]))
-;}},...
+}},...
'process',{{struct(...
'nbi_beamlets_group',int32(-999999999),...
'nbi_energy',struct(...
@@ -304,7 +351,7 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'profiles_1d',{{struct(...
'co_passing',struct(...
'collisions',struct(...
@@ -340,7 +387,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -384,7 +431,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -397,7 +444,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'current_fast_tor',double([]),...
'current_fast_tor_error_index',int32(-999999999),...
'current_fast_tor_error_lower',double([]),...
@@ -446,7 +493,7 @@ struct(...
'particles_error_index',int32(-999999999),...
'particles_error_lower',double([]),...
'particles_error_upper',double([]))
-;}},...
+}},...
'torque_tor_j_radial',double([]),...
'torque_tor_j_radial_error_index',int32(-999999999),...
'torque_tor_j_radial_error_lower',double([]),...
@@ -484,7 +531,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -528,7 +575,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -541,7 +588,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'counter_passing',struct(...
'collisions',struct(...
'electrons',struct(...
@@ -576,7 +623,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -620,7 +667,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -633,7 +680,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'current_fast_tor',double([]),...
'current_fast_tor_error_index',int32(-999999999),...
'current_fast_tor_error_lower',double([]),...
@@ -682,7 +729,7 @@ struct(...
'particles_error_index',int32(-999999999),...
'particles_error_lower',double([]),...
'particles_error_upper',double([]))
-;}},...
+}},...
'torque_tor_j_radial',double([]),...
'torque_tor_j_radial_error_index',int32(-999999999),...
'torque_tor_j_radial_error_lower',double([]),...
@@ -781,7 +828,7 @@ struct(...
'particles_error_index',int32(-999999999),...
'particles_error_lower',double([]),...
'particles_error_upper',double([]))
-;}},...
+}},...
'thermalisation',struct(...
'energy',double([]),...
'energy_error_index',int32(-999999999),...
@@ -834,7 +881,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -878,7 +925,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -891,7 +938,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'current_fast_tor',double([]),...
'current_fast_tor_error_index',int32(-999999999),...
'current_fast_tor_error_lower',double([]),...
@@ -940,12 +987,12 @@ struct(...
'particles_error_index',int32(-999999999),...
'particles_error_lower',double([]),...
'particles_error_upper',double([]))
-;}},...
+}},...
'torque_tor_j_radial',double([]),...
'torque_tor_j_radial_error_index',int32(-999999999),...
'torque_tor_j_radial_error_lower',double([]),...
'torque_tor_j_radial_error_upper',double([])))
-;}},...
+}},...
'profiles_2d',{{struct(...
'co_passing',struct(...
'collisions',struct(...
@@ -981,7 +1028,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -1025,7 +1072,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -1038,7 +1085,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'current_fast_tor',double([]),...
'current_fast_tor_error_index',int32(-999999999),...
'current_fast_tor_error_lower',double([]),...
@@ -1104,7 +1151,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -1148,7 +1195,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -1161,7 +1208,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'counter_passing',struct(...
'collisions',struct(...
'electrons',struct(...
@@ -1196,7 +1243,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -1240,7 +1287,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -1253,7 +1300,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'current_fast_tor',double([]),...
'current_fast_tor_error_index',int32(-999999999),...
'current_fast_tor_error_lower',double([]),...
@@ -1394,7 +1441,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -1438,7 +1485,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'torque_fast_tor',double([]),...
'torque_fast_tor_error_index',int32(-999999999),...
'torque_fast_tor_error_lower',double([]),...
@@ -1451,7 +1498,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}}),...
+}}),...
'current_fast_tor',double([]),...
'current_fast_tor_error_index',int32(-999999999),...
'current_fast_tor_error_lower',double([]),...
@@ -1484,7 +1531,7 @@ struct(...
'torque_tor_j_radial_error_index',int32(-999999999),...
'torque_tor_j_radial_error_lower',double([]),...
'torque_tor_j_radial_error_upper',double([])))
-;}},...
+}},...
'species',struct(...
'ion',struct(...
'element',{{struct(...
@@ -1501,7 +1548,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -1538,7 +1585,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -1563,12 +1610,57 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}})
-;}},...
+}})
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_divertors.m b/matlab/TCV_IMAS/ids_empty/ids_empty_divertors.m
index 0ca55b0d64c7d9a7d2be28293df3a759c0e9dce6..9189279bff29504aeb5dbd1b2ff9aaf2cd66a0c3 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_divertors.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_divertors.m
@@ -1,25 +1,35 @@
function S = ids_empty_divertors
% function S = ids_empty_divertors
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
'repository','',...
'version',''),...
'divertor',{{struct(...
+'current_incident',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
'identifier','',...
'name','',...
'particle_flux_recycled_total',struct(...
@@ -83,6 +93,12 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'target',{{struct(...
+'current_incident',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
'extension_r',double(-9e+40),...
'extension_r_error_index',int32(-999999999),...
'extension_r_error_lower',double(-9e+40),...
@@ -98,9 +114,6 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'heat_flux_steady_limit_max',double(-9e+40),...
-'heat_flux_steady_limit_max_error_index',int32(-999999999),...
-'heat_flux_steady_limit_max_error_lower',double(-9e+40),...
-'heat_flux_steady_limit_max_error_upper',double(-9e+40),...
'identifier','',...
'name','',...
'power_black_body',struct(...
@@ -170,13 +183,35 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
't_e_target_sputtering_limit_max',double(-9e+40),...
-'t_e_target_sputtering_limit_max_error_index',int32(-999999999),...
-'t_e_target_sputtering_limit_max_error_lower',double(-9e+40),...
-'t_e_target_sputtering_limit_max_error_upper',double(-9e+40),...
'temperature_limit_max',double(-9e+40),...
-'temperature_limit_max_error_index',int32(-999999999),...
-'temperature_limit_max_error_lower',double(-9e+40),...
-'temperature_limit_max_error_upper',double(-9e+40),...
+'tile',{{struct(...
+'current_incident',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'identifier','',...
+'name','',...
+'shunt_index',int32(-999999999),...
+'surface_area',double(-9e+40),...
+'surface_area_error_index',int32(-999999999),...
+'surface_area_error_lower',double(-9e+40),...
+'surface_area_error_upper',double(-9e+40),...
+'surface_outline',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])))
+}},...
'tilt_angle_pol',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -201,33 +236,78 @@ struct(...
't_e_target_error_lower',double(-9e+40),...
't_e_target_error_upper',double(-9e+40),...
'time',double(-9e+40))
-;}},...
+}},...
'wetted_area',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'wetted_area',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
-'poloidal_sol_current',{{struct(...
-'identifier','',...
-'name','')
-;}},...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_ec_launchers.m b/matlab/TCV_IMAS/ids_empty/ids_empty_ec_launchers.m
index 426542d4346b825c2d9cee0be9275405d127e80f..2c0d2f7b237ae9dcabff3b7403b64a755b098382 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_ec_launchers.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_ec_launchers.m
@@ -1,62 +1,13 @@
function S = ids_empty_ec_launchers
% function S = ids_empty_ec_launchers
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
-'code',struct(...
-'commit','',...
-'library',{{struct(...
-'commit','',...
-'name','',...
-'parameters','',...
-'repository','',...
-'version','')
-;}},...
-'name','',...
-'output_flag',int32([]),...
-'parameters','',...
-'repository','',...
-'version',''),...
-'ids_properties',struct(...
-'comment','',...
-'creation_date','',...
-'homogeneous_time',int32(-999999999),...
-'provider','',...
-'source','',...
-'version_put',struct(...
-'access_layer','',...
-'access_layer_language','',...
-'data_dictionary','')),...
-'launcher',{{struct(...
-'beam',struct(...
-'phase',struct(...
-'angle',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'curvature',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([]))),...
-'spot',struct(...
-'angle',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'size',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])))),...
+'beam',{{struct(...
'frequency',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -73,32 +24,121 @@ struct(...
'r_error_index',int32(-999999999),...
'r_error_lower',double([]),...
'r_error_upper',double([]),...
-'time',double([]),...
+'r_limit_max',double(-9e+40),...
+'r_limit_min',double(-9e+40),...
'z',double([]),...
'z_error_index',int32(-999999999),...
'z_error_lower',double([]),...
'z_error_upper',double([])),...
-'mode',struct(...
-'data',int32([]),...
-'time',double([])),...
+'mode',int32(-999999999),...
'name','',...
+'phase',struct(...
+'angle',double([]),...
+'angle_error_index',int32(-999999999),...
+'angle_error_lower',double([]),...
+'angle_error_upper',double([]),...
+'curvature',double([]),...
+'curvature_error_index',int32(-999999999),...
+'curvature_error_lower',double([]),...
+'curvature_error_upper',double([])),...
'power_launched',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])),...
-'steering_angle_pol',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'steering_angle_tor',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])))
-;}},...
+'spot',struct(...
+'angle',double([]),...
+'angle_error_index',int32(-999999999),...
+'angle_error_lower',double([]),...
+'angle_error_upper',double([]),...
+'size',double([]),...
+'size_error_index',int32(-999999999),...
+'size_error_lower',double([]),...
+'size_error_upper',double([])),...
+'steering_angle_pol',double([]),...
+'steering_angle_pol_error_index',int32(-999999999),...
+'steering_angle_pol_error_lower',double([]),...
+'steering_angle_pol_error_upper',double([]),...
+'steering_angle_tor',double([]),...
+'steering_angle_tor_error_index',int32(-999999999),...
+'steering_angle_tor_error_lower',double([]),...
+'steering_angle_tor_error_upper',double([]),...
+'time',double([]))
+}},...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_ece.m b/matlab/TCV_IMAS/ids_empty/ids_empty_ece.m
index 628fc490da9825c4b8fe8e1bbfd84c13cf141bac..5f19a5bfa5e35711454aed30aebd6b0847a08994 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_ece.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_ece.m
@@ -1,11 +1,40 @@
function S = ids_empty_ece
% function S = ids_empty_ece
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
+'beam',struct(...
+'phase',struct(...
+'angle',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'curvature',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([]))),...
+'spot',struct(...
+'angle',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'size',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])))),...
'delta_position_suprathermal',struct(...
'phi',double([]),...
'phi_error_index',int32(-999999999),...
@@ -46,6 +75,10 @@ struct(...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
'identifier','',...
+'if_bandwidth',double(-9e+40),...
+'if_bandwidth_error_index',int32(-999999999),...
+'if_bandwidth_error_lower',double(-9e+40),...
+'if_bandwidth_error_upper',double(-9e+40),...
'name','',...
'optical_depth',struct(...
'data',double([]),...
@@ -95,16 +128,18 @@ struct(...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
'time',double([]))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -114,12 +149,61 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'line_of_sight',struct(...
'first_point',struct(...
'phi',double(-9e+40),...
@@ -147,6 +231,68 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))),...
+'polarizer',{{struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'polarization_angle',double(-9e+40),...
+'polarization_angle_error_index',int32(-999999999),...
+'polarization_angle_error_lower',double(-9e+40),...
+'polarization_angle_error_upper',double(-9e+40),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))
+}},...
'psi_normalization',struct(...
'psi_boundary',double([]),...
'psi_boundary_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_edge_profiles.m b/matlab/TCV_IMAS/ids_empty/ids_empty_edge_profiles.m
index 1deb44bc3bb5e14ba6ea20e56522011dae498a19..c1ad9edb801e2692805b44ff8259035efb27884b 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_edge_profiles.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_edge_profiles.m
@@ -1,25 +1,41 @@
function S = ids_empty_edge_profiles
% function S = ids_empty_edge_profiles
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
'repository','',...
'version',''),...
'ggd',{{struct(...
+'a_field_parallel',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'e_field',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -47,6 +63,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -62,8 +86,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'electrons',struct(...
'density',{{struct(...
'coefficients',double([]),...
@@ -76,7 +108,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'density_fast',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -88,7 +120,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'distribution_function',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -100,7 +132,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -112,7 +144,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -124,7 +156,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_perpendicular',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -136,7 +168,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'temperature',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -148,7 +180,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'velocity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -176,6 +208,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -191,8 +231,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}}),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}}),...
'ion',{{struct(...
'density',{{struct(...
'coefficients',double([]),...
@@ -205,7 +253,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'density_fast',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -217,7 +265,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'element',{{struct(...
'a',double(-9e+40),...
'a_error_index',int32(-999999999),...
@@ -232,7 +280,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy_density_kinetic',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -244,7 +292,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -259,7 +307,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -271,7 +319,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_perpendicular',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -283,7 +331,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'state',{{struct(...
'density',{{struct(...
'coefficients',double([]),...
@@ -296,7 +344,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'density_fast',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -308,7 +356,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'distribution_function',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -320,7 +368,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'electron_configuration','',...
'energy_density_kinetic',{{struct(...
'coefficients',double([]),...
@@ -333,7 +381,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'ionisation_potential',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -345,7 +393,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'pressure',{{struct(...
'coefficients',double([]),...
@@ -358,7 +406,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -370,7 +418,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_perpendicular',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -382,7 +430,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'temperature',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -394,7 +442,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'velocity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -422,6 +470,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -437,8 +493,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'velocity_diamagnetic',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -466,6 +530,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -481,8 +553,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'velocity_exb',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -510,6 +590,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -525,8 +613,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
'vibrational_level_error_lower',double(-9e+40),...
@@ -543,7 +639,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'z_max',double(-9e+40),...
'z_max_error_index',int32(-999999999),...
'z_max_error_lower',double(-9e+40),...
@@ -563,8 +659,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})
-;}},...
+}})
+}},...
'temperature',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -576,7 +672,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'velocity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -604,6 +700,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -619,13 +723,21 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'j_anomalous',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -653,6 +765,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -668,8 +788,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'j_diamagnetic',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -697,6 +825,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -712,8 +848,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'j_heat_viscosity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -741,6 +885,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -756,8 +908,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'j_inertial',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -785,6 +945,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -800,8 +968,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'j_ion_neutral_friction',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -829,6 +1005,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -844,8 +1028,28 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'j_parallel',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'j_parallel_viscosity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -873,6 +1077,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -888,8 +1100,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'j_perpendicular_viscosity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -917,6 +1137,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -932,8 +1160,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'j_pfirsch_schlueter',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -961,6 +1197,74 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'radial',double([]),...
+'radial_coefficients',double([]),...
+'radial_coefficients_error_index',int32(-999999999),...
+'radial_coefficients_error_lower',double([]),...
+'radial_coefficients_error_upper',double([]),...
+'radial_error_index',int32(-999999999),...
+'radial_error_lower',double([]),...
+'radial_error_upper',double([]),...
+'toroidal',double([]),...
+'toroidal_coefficients',double([]),...
+'toroidal_coefficients_error_index',int32(-999999999),...
+'toroidal_coefficients_error_lower',double([]),...
+'toroidal_coefficients_error_upper',double([]),...
+'toroidal_error_index',int32(-999999999),...
+'toroidal_error_lower',double([]),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'j_total',{{struct(...
+'diamagnetic',double([]),...
+'diamagnetic_coefficients',double([]),...
+'diamagnetic_coefficients_error_index',int32(-999999999),...
+'diamagnetic_coefficients_error_lower',double([]),...
+'diamagnetic_coefficients_error_upper',double([]),...
+'diamagnetic_error_index',int32(-999999999),...
+'diamagnetic_error_lower',double([]),...
+'diamagnetic_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'parallel',double([]),...
+'parallel_coefficients',double([]),...
+'parallel_coefficients_error_index',int32(-999999999),...
+'parallel_coefficients_error_lower',double([]),...
+'parallel_coefficients_error_upper',double([]),...
+'parallel_error_index',int32(-999999999),...
+'parallel_error_lower',double([]),...
+'parallel_error_upper',double([]),...
+'poloidal',double([]),...
+'poloidal_coefficients',double([]),...
+'poloidal_coefficients_error_index',int32(-999999999),...
+'poloidal_coefficients_error_lower',double([]),...
+'poloidal_coefficients_error_upper',double([]),...
+'poloidal_error_index',int32(-999999999),...
+'poloidal_error_lower',double([]),...
+'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -976,8 +1280,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'n_i_total_over_n_e',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -989,7 +1301,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'neutral',{{struct(...
'density',{{struct(...
'coefficients',double([]),...
@@ -1002,7 +1314,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'density_fast',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1014,7 +1326,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'element',{{struct(...
'a',double(-9e+40),...
'a_error_index',int32(-999999999),...
@@ -1029,7 +1341,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy_density_kinetic',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1041,7 +1353,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'multiple_states_flag',int32(-999999999),...
@@ -1056,7 +1368,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1068,7 +1380,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_perpendicular',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1080,7 +1392,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'state',{{struct(...
'density',{{struct(...
'coefficients',double([]),...
@@ -1093,7 +1405,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'density_fast',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1105,7 +1417,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'distribution_function',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1117,7 +1429,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'electron_configuration','',...
'energy_density_kinetic',{{struct(...
'coefficients',double([]),...
@@ -1130,7 +1442,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'neutral_type',struct(...
'description','',...
@@ -1147,7 +1459,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1159,7 +1471,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_fast_perpendicular',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1171,7 +1483,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'temperature',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1183,7 +1495,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'velocity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1211,6 +1523,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1226,8 +1546,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'velocity_diamagnetic',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1255,6 +1583,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1270,8 +1606,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'velocity_exb',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1299,6 +1643,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1314,14 +1666,22 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}},...
+}},...
'temperature',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1333,7 +1693,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'velocity',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1361,6 +1721,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1376,9 +1744,17 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}})
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}})
+}},...
'phi_potential',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1390,7 +1766,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1402,7 +1778,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_perpendicular',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1414,7 +1790,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'pressure_thermal',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1426,7 +1802,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
't_i_average',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1438,7 +1814,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'time',double(-9e+40),...
'zeff',{{struct(...
'coefficients',double([]),...
@@ -1451,8 +1827,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})
-;}},...
+}})
+}},...
'ggd_fast',{{struct(...
'electrons',struct(...
'density',{{struct(...
@@ -1462,7 +1838,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'temperature',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -1470,7 +1846,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}}),...
+}}),...
'energy_thermal',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -1478,7 +1854,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'ion',{{struct(...
'content',{{struct(...
'grid_index',int32(-999999999),...
@@ -1487,7 +1863,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'density',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -1495,7 +1871,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'element',{{struct(...
'a',double(-9e+40),...
'a_error_index',int32(-999999999),...
@@ -1510,7 +1886,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'neutral_index',int32(-999999999),...
'temperature',{{struct(...
@@ -1520,14 +1896,14 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'grid_ggd',{{struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -1543,15 +1919,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -1569,11 +1945,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -1585,12 +1962,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -1599,21 +1984,70 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}},...
+}})
+}})
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'profiles_1d',{{struct(...
'conductivity_parallel',double([]),...
'conductivity_parallel_error_index',int32(-999999999),...
@@ -1897,7 +2331,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -2054,7 +2488,7 @@ struct(...
'z_square_average_error_index',int32(-999999999),...
'z_square_average_error_lower',double(-9e+40),...
'z_square_average_error_upper',double(-9e+40))
-;}},...
+}},...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
@@ -2141,7 +2575,7 @@ struct(...
'z_ion_square_1d_error_index',int32(-999999999),...
'z_ion_square_1d_error_lower',double([]),...
'z_ion_square_1d_error_upper',double([]))
-;}},...
+}},...
'j_bootstrap',double([]),...
'j_bootstrap_error_index',int32(-999999999),...
'j_bootstrap_error_lower',double([]),...
@@ -2205,7 +2639,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'multiple_states_flag',int32(-999999999),...
@@ -2290,7 +2724,7 @@ struct(...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}},...
+}},...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
@@ -2316,7 +2750,7 @@ struct(...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
'toroidal_error_upper',double([])))
-;}},...
+}},...
'phi_potential',double([]),...
'phi_potential_error_index',int32(-999999999),...
'phi_potential_error_lower',double([]),...
@@ -2434,7 +2868,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double([]),...
'weight_error_upper',double([])))
-;}},...
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_edge_sources.m b/matlab/TCV_IMAS/ids_empty/ids_empty_edge_sources.m
index 2fcfba584f07cebf6fc29c1e1bae0d2deb590ea0..b5cf507cafe070ab5d60de3946a06267ef4fa12a 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_edge_sources.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_edge_sources.m
@@ -1,19 +1,23 @@
function S = ids_empty_edge_sources
% function S = ids_empty_edge_sources
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -34,15 +38,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -60,11 +64,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -76,12 +81,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -90,21 +103,70 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}},...
+}})
+}})
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'source',{{struct(...
'ggd',{{struct(...
'current',{{struct(...
@@ -118,7 +180,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'electrons',struct(...
'energy',{{struct(...
'coefficients',double([]),...
@@ -131,7 +193,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'particles',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -143,7 +205,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}}),...
'ion',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -159,7 +221,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -171,7 +233,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'momentum',{{struct(...
'diamagnetic',double([]),...
@@ -200,6 +262,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -215,8 +285,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
'particles',{{struct(...
@@ -230,7 +308,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'state',{{struct(...
'electron_configuration','',...
'energy',{{struct(...
@@ -244,7 +322,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'momentum',{{struct(...
'diamagnetic',double([]),...
@@ -273,6 +351,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -288,8 +374,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'particles',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -301,7 +395,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
'vibrational_level_error_lower',double(-9e+40),...
@@ -315,12 +409,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'momentum',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -348,6 +442,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -363,8 +465,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'neutral',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -380,7 +490,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -392,7 +502,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'momentum',{{struct(...
@@ -422,6 +532,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -437,8 +555,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'multiple_states_flag',int32(-999999999),...
'particles',{{struct(...
'coefficients',double([]),...
@@ -451,7 +577,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'state',{{struct(...
'electron_configuration','',...
'energy',{{struct(...
@@ -465,7 +591,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'momentum',{{struct(...
'diamagnetic',double([]),...
@@ -494,6 +620,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -509,8 +643,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'neutral_type',struct(...
'description','',...
'index',int32(-999999999),...
@@ -526,14 +668,14 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}})
-;}},...
+}})
+}},...
'time',double(-9e+40),...
'total_ion_energy',{{struct(...
'coefficients',double([]),...
@@ -546,8 +688,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})
-;}},...
+}})
+}},...
'ggd_fast',{{struct(...
'ion',{{struct(...
'element',{{struct(...
@@ -564,7 +706,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'neutral_index',int32(-999999999),...
'power',{{struct(...
@@ -574,14 +716,14 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -602,7 +744,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -639,7 +781,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'state',struct(...
'electron_configuration','',...
@@ -657,5 +799,5 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name','')))
-;}},...
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_edge_transport.m b/matlab/TCV_IMAS/ids_empty/ids_empty_edge_transport.m
index 0fa1614ab92d8c86110457f23ee4d0bfcb979653..48ce5d1d602a0cd7b30e3ae84ce77b51aa23103d 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_edge_transport.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_edge_transport.m
@@ -1,19 +1,23 @@
function S = ids_empty_edge_transport
% function S = ids_empty_edge_transport
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -34,15 +38,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -60,11 +64,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -76,12 +81,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -90,24 +103,74 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}},...
+}})
+}})
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'model',{{struct(...
'code',struct(...
'commit','',...
+'description','',...
'name','',...
'output_flag',struct(...
'data',int32([]),...
@@ -147,6 +210,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -162,8 +233,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'electrons',struct(...
'energy',struct(...
'd',{{struct(...
@@ -177,7 +256,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -189,7 +292,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -201,7 +304,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -213,7 +340,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'particles',struct(...
'd',{{struct(...
'coefficients',double([]),...
@@ -226,7 +377,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -238,7 +413,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -250,7 +425,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -262,7 +461,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}})),...
'ion',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -278,7 +501,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',struct(...
'd',{{struct(...
'coefficients',double([]),...
@@ -291,7 +514,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -303,7 +550,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -315,7 +562,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -327,7 +598,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'label','',...
'momentum',struct(...
'd',{{struct(...
@@ -357,6 +652,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -372,8 +675,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -401,6 +736,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -416,8 +759,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'flux_limiter',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -445,6 +796,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -460,24 +819,56 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
-'v',{{struct(...
-'diamagnetic',double([]),...
-'diamagnetic_coefficients',double([]),...
-'diamagnetic_coefficients_error_index',int32(-999999999),...
-'diamagnetic_coefficients_error_lower',double([]),...
-'diamagnetic_coefficients_error_upper',double([]),...
-'diamagnetic_error_index',int32(-999999999),...
-'diamagnetic_error_lower',double([]),...
-'diamagnetic_error_upper',double([]),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
-'parallel',double([]),...
-'parallel_coefficients',double([]),...
-'parallel_coefficients_error_index',int32(-999999999),...
-'parallel_coefficients_error_lower',double([]),...
-'parallel_coefficients_error_upper',double([]),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v',{{struct(...
+'diamagnetic',double([]),...
+'diamagnetic_coefficients',double([]),...
+'diamagnetic_coefficients_error_index',int32(-999999999),...
+'diamagnetic_coefficients_error_lower',double([]),...
+'diamagnetic_coefficients_error_upper',double([]),...
+'diamagnetic_error_index',int32(-999999999),...
+'diamagnetic_error_lower',double([]),...
+'diamagnetic_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'parallel',double([]),...
+'parallel_coefficients',double([]),...
+'parallel_coefficients_error_index',int32(-999999999),...
+'parallel_coefficients_error_lower',double([]),...
+'parallel_coefficients_error_upper',double([]),...
'parallel_error_index',int32(-999999999),...
'parallel_error_lower',double([]),...
'parallel_error_upper',double([]),...
@@ -489,6 +880,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -504,8 +903,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}}),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
'particles',struct(...
@@ -520,7 +951,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -532,7 +987,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -544,7 +999,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -556,7 +1035,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'state',{{struct(...
'electron_configuration','',...
'energy',struct(...
@@ -571,7 +1074,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -583,7 +1110,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -595,7 +1122,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -607,7 +1158,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'label','',...
'momentum',struct(...
'd',{{struct(...
@@ -637,6 +1212,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -652,8 +1235,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -681,6 +1296,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -696,8 +1319,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'flux_limiter',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -725,6 +1356,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -740,8 +1379,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -769,6 +1440,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -784,8 +1463,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}}),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'particles',struct(...
'd',{{struct(...
'coefficients',double([]),...
@@ -798,8 +1509,56 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
-'flux',{{struct(...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_limiter',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_pol',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
'coefficients_error_lower',double([]),...
@@ -810,8 +1569,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
-'flux_limiter',{{struct(...
+}},...
+'flux_radial',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
'coefficients_error_lower',double([]),...
@@ -822,7 +1581,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -834,7 +1593,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
'vibrational_level_error_lower',double(-9e+40),...
@@ -848,12 +1631,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'momentum',struct(...
'd',{{struct(...
'diamagnetic',double([]),...
@@ -882,6 +1665,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -897,8 +1688,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -926,6 +1749,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -941,8 +1772,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'flux_limiter',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -970,6 +1809,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -985,8 +1832,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1014,6 +1893,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1029,8 +1916,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}}),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'neutral',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -1046,7 +1965,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',struct(...
'd',{{struct(...
'coefficients',double([]),...
@@ -1059,7 +1978,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1071,7 +2014,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1083,7 +2026,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1095,7 +2062,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'ion_index',int32(-999999999),...
'label','',...
'momentum',struct(...
@@ -1126,6 +2117,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1141,8 +2140,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1170,6 +2201,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1185,8 +2224,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'flux_limiter',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1214,6 +2261,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1229,8 +2284,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1258,6 +2345,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1273,8 +2368,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}}),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'multiple_states_flag',int32(-999999999),...
'particles',struct(...
'd',{{struct(...
@@ -1288,8 +2415,68 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
-'flux',{{struct(...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_limiter',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
'coefficients_error_lower',double([]),...
@@ -1300,8 +2487,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
-'flux_limiter',{{struct(...
+}},...
+'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
'coefficients_error_lower',double([]),...
@@ -1312,8 +2499,20 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
-'v',{{struct(...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
'coefficients_error_lower',double([]),...
@@ -1324,7 +2523,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}}),...
'state',{{struct(...
'electron_configuration','',...
'energy',struct(...
@@ -1339,7 +2538,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1351,7 +2574,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1363,7 +2586,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1375,7 +2622,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'label','',...
'momentum',struct(...
'd',{{struct(...
@@ -1405,6 +2676,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1420,8 +2699,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1449,6 +2760,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1464,8 +2783,16 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
'flux_limiter',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1493,6 +2820,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1508,8 +2843,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}},...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'diamagnetic',double([]),...
'diamagnetic_coefficients',double([]),...
@@ -1537,6 +2904,14 @@ struct(...
'poloidal_error_index',int32(-999999999),...
'poloidal_error_lower',double([]),...
'poloidal_error_upper',double([]),...
+'r',double([]),...
+'r_coefficients',double([]),...
+'r_coefficients_error_index',int32(-999999999),...
+'r_coefficients_error_lower',double([]),...
+'r_coefficients_error_upper',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'radial',double([]),...
'radial_coefficients',double([]),...
'radial_coefficients_error_index',int32(-999999999),...
@@ -1552,8 +2927,40 @@ struct(...
'toroidal_coefficients_error_upper',double([]),...
'toroidal_error_index',int32(-999999999),...
'toroidal_error_lower',double([]),...
-'toroidal_error_upper',double([]))
-;}}),...
+'toroidal_error_upper',double([]),...
+'z',double([]),...
+'z_coefficients',double([]),...
+'z_coefficients_error_index',int32(-999999999),...
+'z_coefficients_error_lower',double([]),...
+'z_coefficients_error_upper',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'neutral_type',struct(...
'description','',...
'index',int32(-999999999),...
@@ -1570,7 +2977,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1582,7 +3013,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1594,7 +3025,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1606,14 +3061,38 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}})
-;}},...
+}})
+}},...
'time',double(-9e+40),...
'total_ion_energy',struct(...
'd',{{struct(...
@@ -1627,7 +3106,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'d_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'d_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'flux',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1639,7 +3142,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'flux_limiter',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1651,7 +3154,31 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'flux_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'flux_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'v',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1663,8 +3190,32 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}))
-;}},...
+}},...
+'v_pol',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'v_radial',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}))
+}},...
'ggd_fast',{{struct(...
'electrons',struct(...
'particle_flux_integrated',{{struct(...
@@ -1674,7 +3225,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'power',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -1682,7 +3233,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}}),...
+}}),...
'energy_flux_max',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -1690,7 +3241,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'ion',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -1706,7 +3257,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'neutral_index',int32(-999999999),...
'particle_flux_integrated',{{struct(...
@@ -1716,12 +3267,12 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'neutral',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -1737,7 +3288,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'particle_flux_integrated',{{struct(...
@@ -1747,8 +3298,8 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}})
-;}},...
+}})
+}},...
'power',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -1756,7 +3307,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'power_ion_total',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -1764,12 +3315,12 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_em_coupling.m b/matlab/TCV_IMAS/ids_empty/ids_empty_em_coupling.m
index 327d1f7639ec5dfdf92db990337b0b1dfb5f60fc..e40e66f31818eae71bc6a92247a119f5bb4abf55 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_em_coupling.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_em_coupling.m
@@ -1,20 +1,24 @@
function S = ids_empty_em_coupling
% function S = ids_empty_em_coupling
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'active_coils',{{}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -38,6 +42,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_equilibrium.m b/matlab/TCV_IMAS/ids_empty/ids_empty_equilibrium.m
index 46541df6edc30b4042e84ec4717c987deda696ed..3e6e949fcde10e08ec0e4099b17e64782404c87a 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_equilibrium.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_equilibrium.m
@@ -1,19 +1,23 @@
function S = ids_empty_equilibrium
% function S = ids_empty_equilibrium
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -35,15 +39,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -61,11 +65,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -77,12 +82,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -91,16 +104,61 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}})
-;}},...
+}})
+}})
+}})
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -199,7 +257,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}},...
+}},...
'triangularity',double(-9e+40),...
'triangularity_error_index',int32(-999999999),...
'triangularity_error_lower',double(-9e+40),...
@@ -222,7 +280,45 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}}),...
+}}),...
+'boundary_secondary_separatrix',struct(...
+'distance_inner_outer',double(-9e+40),...
+'distance_inner_outer_error_index',int32(-999999999),...
+'distance_inner_outer_error_lower',double(-9e+40),...
+'distance_inner_outer_error_upper',double(-9e+40),...
+'outline',struct(...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'psi',double(-9e+40),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double(-9e+40),...
+'psi_error_upper',double(-9e+40),...
+'strike_point',{{struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))
+}},...
+'x_point',{{struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))
+}}),...
'boundary_separatrix',struct(...
'active_limiter_point',struct(...
'r',double(-9e+40),...
@@ -233,6 +329,28 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)),...
+'closest_wall_point',struct(...
+'distance',double(-9e+40),...
+'distance_error_index',int32(-999999999),...
+'distance_error_lower',double(-9e+40),...
+'distance_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'dr_dz_zero_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'elongation',double(-9e+40),...
'elongation_error_index',int32(-999999999),...
'elongation_error_lower',double(-9e+40),...
@@ -264,7 +382,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}},...
+}},...
'geometric_axis',struct(...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
@@ -316,15 +434,27 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}},...
+}},...
'triangularity',double(-9e+40),...
'triangularity_error_index',int32(-999999999),...
'triangularity_error_lower',double(-9e+40),...
'triangularity_error_upper',double(-9e+40),...
+'triangularity_inner',double(-9e+40),...
+'triangularity_inner_error_index',int32(-999999999),...
+'triangularity_inner_error_lower',double(-9e+40),...
+'triangularity_inner_error_upper',double(-9e+40),...
'triangularity_lower',double(-9e+40),...
'triangularity_lower_error_index',int32(-999999999),...
'triangularity_lower_error_lower',double(-9e+40),...
'triangularity_lower_error_upper',double(-9e+40),...
+'triangularity_minor',double(-9e+40),...
+'triangularity_minor_error_index',int32(-999999999),...
+'triangularity_minor_error_lower',double(-9e+40),...
+'triangularity_minor_error_upper',double(-9e+40),...
+'triangularity_outer',double(-9e+40),...
+'triangularity_outer_error_index',int32(-999999999),...
+'triangularity_outer_error_lower',double(-9e+40),...
+'triangularity_outer_error_upper',double(-9e+40),...
'triangularity_upper',double(-9e+40),...
'triangularity_upper_error_index',int32(-999999999),...
'triangularity_upper_error_lower',double(-9e+40),...
@@ -339,7 +469,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}}),...
+}}),...
'constraints',struct(...
'b_field_tor_vacuum_r',struct(...
'chi_squared',double(-9e+40),...
@@ -387,7 +517,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'diamagnetic_flux',struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -434,7 +564,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'flux_loop',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -458,7 +588,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'ip',struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -529,7 +659,52 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40)))
-;}},...
+}},...
+'j_tor',{{struct(...
+'chi_squared',double(-9e+40),...
+'chi_squared_error_index',int32(-999999999),...
+'chi_squared_error_lower',double(-9e+40),...
+'chi_squared_error_upper',double(-9e+40),...
+'exact',int32(-999999999),...
+'measured',double(-9e+40),...
+'measured_error_index',int32(-999999999),...
+'measured_error_lower',double(-9e+40),...
+'measured_error_upper',double(-9e+40),...
+'position',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'psi',double(-9e+40),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double(-9e+40),...
+'psi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'rho_tor_norm',double(-9e+40),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double(-9e+40),...
+'rho_tor_norm_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'reconstructed',double(-9e+40),...
+'reconstructed_error_index',int32(-999999999),...
+'reconstructed_error_lower',double(-9e+40),...
+'reconstructed_error_upper',double(-9e+40),...
+'source','',...
+'time_measurement',double(-9e+40),...
+'time_measurement_error_index',int32(-999999999),...
+'time_measurement_error_lower',double(-9e+40),...
+'time_measurement_error_upper',double(-9e+40),...
+'weight',double(-9e+40),...
+'weight_error_index',int32(-999999999),...
+'weight_error_lower',double(-9e+40),...
+'weight_error_upper',double(-9e+40))
+}},...
'mse_polarisation_angle',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -553,7 +728,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'n_e',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -564,6 +739,27 @@ struct(...
'measured_error_index',int32(-999999999),...
'measured_error_lower',double(-9e+40),...
'measured_error_upper',double(-9e+40),...
+'position',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'psi',double(-9e+40),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double(-9e+40),...
+'psi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'rho_tor_norm',double(-9e+40),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double(-9e+40),...
+'rho_tor_norm_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'reconstructed',double(-9e+40),...
'reconstructed_error_index',int32(-999999999),...
'reconstructed_error_lower',double(-9e+40),...
@@ -577,7 +773,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'n_e_line',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -601,7 +797,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'pf_current',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -625,7 +821,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'pf_passive_current',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -649,7 +845,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'pressure',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -660,6 +856,27 @@ struct(...
'measured_error_index',int32(-999999999),...
'measured_error_lower',double(-9e+40),...
'measured_error_upper',double(-9e+40),...
+'position',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'psi',double(-9e+40),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double(-9e+40),...
+'psi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'rho_tor_norm',double(-9e+40),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double(-9e+40),...
+'rho_tor_norm_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'reconstructed',double(-9e+40),...
'reconstructed_error_index',int32(-999999999),...
'reconstructed_error_lower',double(-9e+40),...
@@ -673,7 +890,52 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
+'pressure_rotational',{{struct(...
+'chi_squared',double(-9e+40),...
+'chi_squared_error_index',int32(-999999999),...
+'chi_squared_error_lower',double(-9e+40),...
+'chi_squared_error_upper',double(-9e+40),...
+'exact',int32(-999999999),...
+'measured',double(-9e+40),...
+'measured_error_index',int32(-999999999),...
+'measured_error_lower',double(-9e+40),...
+'measured_error_upper',double(-9e+40),...
+'position',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'psi',double(-9e+40),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double(-9e+40),...
+'psi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'rho_tor_norm',double(-9e+40),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double(-9e+40),...
+'rho_tor_norm_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'reconstructed',double(-9e+40),...
+'reconstructed_error_index',int32(-999999999),...
+'reconstructed_error_lower',double(-9e+40),...
+'reconstructed_error_upper',double(-9e+40),...
+'source','',...
+'time_measurement',double(-9e+40),...
+'time_measurement_error_index',int32(-999999999),...
+'time_measurement_error_lower',double(-9e+40),...
+'time_measurement_error_upper',double(-9e+40),...
+'weight',double(-9e+40),...
+'weight_error_index',int32(-999999999),...
+'weight_error_lower',double(-9e+40),...
+'weight_error_upper',double(-9e+40))
+}},...
'q',{{struct(...
'chi_squared',double(-9e+40),...
'chi_squared_error_index',int32(-999999999),...
@@ -689,10 +951,18 @@ struct(...
'phi_error_index',int32(-999999999),...
'phi_error_lower',double(-9e+40),...
'phi_error_upper',double(-9e+40),...
+'psi',double(-9e+40),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double(-9e+40),...
+'psi_error_upper',double(-9e+40),...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
'r_error_lower',double(-9e+40),...
'r_error_upper',double(-9e+40),...
+'rho_tor_norm',double(-9e+40),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double(-9e+40),...
+'rho_tor_norm_error_upper',double(-9e+40),...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
@@ -710,7 +980,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'strike_point',{{struct(...
'chi_squared_r',double(-9e+40),...
'chi_squared_r_error_index',int32(-999999999),...
@@ -748,7 +1018,7 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}},...
+}},...
'x_point',{{struct(...
'chi_squared_r',double(-9e+40),...
'chi_squared_r_error_index',int32(-999999999),...
@@ -786,8 +1056,16 @@ struct(...
'weight_error_index',int32(-999999999),...
'weight_error_lower',double(-9e+40),...
'weight_error_upper',double(-9e+40))
-;}}),...
+}}),...
'convergence',struct(...
+'grad_shafranov_deviation_expression',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'grad_shafranov_deviation_value',double(-9e+40),...
+'grad_shafranov_deviation_value_error_index',int32(-999999999),...
+'grad_shafranov_deviation_value_error_lower',double(-9e+40),...
+'grad_shafranov_deviation_value_error_upper',double(-9e+40),...
'iterations_n',int32(-999999999)),...
'coordinate_system',struct(...
'g11_contravariant',double([]),...
@@ -887,7 +1165,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -899,7 +1177,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -911,7 +1189,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'grid',struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -927,15 +1205,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -953,11 +1231,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -969,12 +1248,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -983,9 +1270,9 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}}),...
+}})
+}})
+}}),...
'j_parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -997,7 +1284,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'j_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1009,7 +1296,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'phi',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1021,7 +1308,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'psi',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1033,7 +1320,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'r',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1045,7 +1332,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'theta',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1057,7 +1344,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -1069,8 +1356,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})
-;}},...
+}})
+}},...
'global_quantities',struct(...
'area',double(-9e+40),...
'area_error_index',int32(-999999999),...
@@ -1088,6 +1375,19 @@ struct(...
'beta_tor_error_index',int32(-999999999),...
'beta_tor_error_lower',double(-9e+40),...
'beta_tor_error_upper',double(-9e+40),...
+'current_centre',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'velocity_z',double(-9e+40),...
+'velocity_z_error_index',int32(-999999999),...
+'velocity_z_error_lower',double(-9e+40),...
+'velocity_z_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'energy_mhd',double(-9e+40),...
'energy_mhd_error_index',int32(-999999999),...
'energy_mhd_error_lower',double(-9e+40),...
@@ -1121,6 +1421,14 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)),...
+'plasma_inductance',double(-9e+40),...
+'plasma_inductance_error_index',int32(-999999999),...
+'plasma_inductance_error_lower',double(-9e+40),...
+'plasma_inductance_error_upper',double(-9e+40),...
+'plasma_resistance',double(-9e+40),...
+'plasma_resistance_error_index',int32(-999999999),...
+'plasma_resistance_error_lower',double(-9e+40),...
+'plasma_resistance_error_upper',double(-9e+40),...
'psi_axis',double(-9e+40),...
'psi_axis_error_index',int32(-999999999),...
'psi_axis_error_lower',double(-9e+40),...
@@ -1129,6 +1437,10 @@ struct(...
'psi_boundary_error_index',int32(-999999999),...
'psi_boundary_error_lower',double(-9e+40),...
'psi_boundary_error_upper',double(-9e+40),...
+'psi_external_average',double(-9e+40),...
+'psi_external_average_error_index',int32(-999999999),...
+'psi_external_average_error_lower',double(-9e+40),...
+'psi_external_average_error_upper',double(-9e+40),...
'q_95',double(-9e+40),...
'q_95_error_index',int32(-999999999),...
'q_95_error_lower',double(-9e+40),...
@@ -1150,6 +1462,10 @@ struct(...
'surface_error_index',int32(-999999999),...
'surface_error_lower',double(-9e+40),...
'surface_error_upper',double(-9e+40),...
+'v_external',double(-9e+40),...
+'v_external_error_index',int32(-999999999),...
+'v_external_error_lower',double(-9e+40),...
+'v_external_error_upper',double(-9e+40),...
'volume',double(-9e+40),...
'volume_error_index',int32(-999999999),...
'volume_error_lower',double(-9e+40),...
@@ -1426,13 +1742,17 @@ struct(...
'theta_error_index',int32(-999999999),...
'theta_error_lower',double([]),...
'theta_error_upper',double([]),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'z',double([]),...
'z_error_index',int32(-999999999),...
'z_error_lower',double([]),...
'z_error_upper',double([]))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
'b0_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_focs.m b/matlab/TCV_IMAS/ids_empty/ids_empty_focs.m
new file mode 100644
index 0000000000000000000000000000000000000000..09abb49ff17e3a7bc42e38bca9ce01a7006c9681
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_focs.m
@@ -0,0 +1,164 @@
+function S = ids_empty_focs
+% function S = ids_empty_focs
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'b_field_z',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'beat_length',double(-9e+40),...
+'beat_length_error_index',int32(-999999999),...
+'beat_length_error_lower',double(-9e+40),...
+'beat_length_error_upper',double(-9e+40),...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'current',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'id','',...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'name','',...
+'outline',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'spun',double(-9e+40),...
+'spun_error_index',int32(-999999999),...
+'spun_error_lower',double(-9e+40),...
+'spun_error_upper',double(-9e+40),...
+'stokes_initial',struct(...
+'s0',double(-9e+40),...
+'s0_error_index',int32(-999999999),...
+'s0_error_lower',double(-9e+40),...
+'s0_error_upper',double(-9e+40),...
+'s1',double(-9e+40),...
+'s1_error_index',int32(-999999999),...
+'s1_error_lower',double(-9e+40),...
+'s1_error_upper',double(-9e+40),...
+'s2',double(-9e+40),...
+'s2_error_index',int32(-999999999),...
+'s2_error_lower',double(-9e+40),...
+'s2_error_upper',double(-9e+40),...
+'s3',double(-9e+40),...
+'s3_error_index',int32(-999999999),...
+'s3_error_lower',double(-9e+40),...
+'s3_error_upper',double(-9e+40)),...
+'stokes_output',{{struct(...
+'s0',double(-9e+40),...
+'s0_error_index',int32(-999999999),...
+'s0_error_lower',double(-9e+40),...
+'s0_error_upper',double(-9e+40),...
+'s1',double(-9e+40),...
+'s1_error_index',int32(-999999999),...
+'s1_error_lower',double(-9e+40),...
+'s1_error_upper',double(-9e+40),...
+'s2',double(-9e+40),...
+'s2_error_index',int32(-999999999),...
+'s2_error_lower',double(-9e+40),...
+'s2_error_upper',double(-9e+40),...
+'s3',double(-9e+40),...
+'s3_error_index',int32(-999999999),...
+'s3_error_lower',double(-9e+40),...
+'s3_error_upper',double(-9e+40),...
+'time',double(-9e+40))
+}},...
+'time',double([]),...
+'twist',double(-9e+40),...
+'twist_error_index',int32(-999999999),...
+'twist_error_lower',double(-9e+40),...
+'twist_error_upper',double(-9e+40));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_gas_injection.m b/matlab/TCV_IMAS/ids_empty/ids_empty_gas_injection.m
index 4e97e972abc313bb35748ea27cc906220715456e..670cb84c57fe45de5cfcb2b183bf631b879197d4 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_gas_injection.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_gas_injection.m
@@ -1,19 +1,23 @@
function S = ids_empty_gas_injection
% function S = ids_empty_gas_injection
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,12 +27,61 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'pipe',{{struct(...
'exit_position',struct(...
'phi',double(-9e+40),...
@@ -83,13 +136,16 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'fraction',double(-9e+40),...
'fraction_error_index',int32(-999999999),...
'fraction_error_lower',double(-9e+40),...
'fraction_error_upper',double(-9e+40),...
'label','')
-;}},...
+}},...
+'valve_indices',int32([]))
+}},...
+'time',double([]),...
'valve',{{struct(...
'electron_rate',struct(...
'data',double([]),...
@@ -113,6 +169,16 @@ struct(...
'flow_rate_min_error_upper',double(-9e+40),...
'identifier','',...
'name','',...
+'pipe_indices',int32([]),...
+'response_curve',struct(...
+'flow_rate',double([]),...
+'flow_rate_error_index',int32(-999999999),...
+'flow_rate_error_lower',double([]),...
+'flow_rate_error_upper',double([]),...
+'voltage',double([]),...
+'voltage_error_index',int32(-999999999),...
+'voltage_error_lower',double([]),...
+'voltage_error_upper',double([])),...
'species',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -128,13 +194,17 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'fraction',double(-9e+40),...
'fraction_error_index',int32(-999999999),...
'fraction_error_lower',double(-9e+40),...
'fraction_error_upper',double(-9e+40),...
'label','')
-;}})
-;}})
-;}},...
-'time',double([]));
+}},...
+'voltage',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])))
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_gas_pumping.m b/matlab/TCV_IMAS/ids_empty/ids_empty_gas_pumping.m
index 340dac1ddc8676c07301e857ad4d36e05e06b072..bb9d237089ca9f6642bcacac9b2e946c19e287f2 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_gas_pumping.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_gas_pumping.m
@@ -1,19 +1,23 @@
function S = ids_empty_gas_pumping
% function S = ids_empty_gas_pumping
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -43,7 +47,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'flow_rate',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -51,12 +55,57 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'label','')
-;}})
-;}},...
+}})
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_gyrokinetics.m b/matlab/TCV_IMAS/ids_empty/ids_empty_gyrokinetics.m
index 19d696668f4197b65c3f1e14b401067446102087..a20b0b627359f2a48dff4ee7e8271f20175b18c1 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_gyrokinetics.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_gyrokinetics.m
@@ -1,19 +1,23 @@
function S = ids_empty_gyrokinetics
% function S = ids_empty_gyrokinetics
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -33,6 +37,18 @@ struct(...
'dc_dr_minor_norm_error_index',int32(-999999999),...
'dc_dr_minor_norm_error_lower',double([]),...
'dc_dr_minor_norm_error_upper',double([]),...
+'delongation_dr_minor_norm',double(-9e+40),...
+'delongation_dr_minor_norm_error_index',int32(-999999999),...
+'delongation_dr_minor_norm_error_lower',double(-9e+40),...
+'delongation_dr_minor_norm_error_upper',double(-9e+40),...
+'dgeometric_axis_r_dr_minor',double(-9e+40),...
+'dgeometric_axis_r_dr_minor_error_index',int32(-999999999),...
+'dgeometric_axis_r_dr_minor_error_lower',double(-9e+40),...
+'dgeometric_axis_r_dr_minor_error_upper',double(-9e+40),...
+'dgeometric_axis_z_dr_minor',double(-9e+40),...
+'dgeometric_axis_z_dr_minor_error_index',int32(-999999999),...
+'dgeometric_axis_z_dr_minor_error_lower',double(-9e+40),...
+'dgeometric_axis_z_dr_minor_error_upper',double(-9e+40),...
'ds_dr_minor_norm',double([]),...
'ds_dr_minor_norm_error_index',int32(-999999999),...
'ds_dr_minor_norm_error_lower',double([]),...
@@ -68,15 +84,7 @@ struct(...
'shape_coefficients_s',double([]),...
'shape_coefficients_s_error_index',int32(-999999999),...
'shape_coefficients_s_error_lower',double([]),...
-'shape_coefficients_s_error_upper',double([]),...
-'triangularity_lower',double(-9e+40),...
-'triangularity_lower_error_index',int32(-999999999),...
-'triangularity_lower_error_lower',double(-9e+40),...
-'triangularity_lower_error_upper',double(-9e+40),...
-'triangularity_upper',double(-9e+40),...
-'triangularity_upper_error_index',int32(-999999999),...
-'triangularity_upper_error_lower',double(-9e+40),...
-'triangularity_upper_error_upper',double(-9e+40)),...
+'shape_coefficients_s_error_upper',double([])),...
'fluxes_integrated_norm',{{struct(...
'energy_a_field_parallel',double(-9e+40),...
'energy_a_field_parallel_error_index',int32(-999999999),...
@@ -126,11 +134,56 @@ struct(...
'particles_phi_potential_error_index',int32(-999999999),...
'particles_phi_potential_error_lower',double(-9e+40),...
'particles_phi_potential_error_upper',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -146,12 +199,28 @@ struct(...
'include_b_field_parallel',int32(-999999999),...
'include_centrifugal_effects',int32(-999999999),...
'include_full_curvature_drift',int32(-999999999),...
-'initial_value_run',int32(-999999999),...
'non_linear_run',int32(-999999999),...
'time_interval_norm',double([]),...
'time_interval_norm_error_index',int32(-999999999),...
'time_interval_norm_error_lower',double([]),...
'time_interval_norm_error_upper',double([])),...
+'normalizing_quantities',struct(...
+'b_field_tor',double(-9e+40),...
+'b_field_tor_error_index',int32(-999999999),...
+'b_field_tor_error_lower',double(-9e+40),...
+'b_field_tor_error_upper',double(-9e+40),...
+'n_e',double(-9e+40),...
+'n_e_error_index',int32(-999999999),...
+'n_e_error_lower',double(-9e+40),...
+'n_e_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'t_e',double(-9e+40),...
+'t_e_error_index',int32(-999999999),...
+'t_e_error_lower',double(-9e+40),...
+'t_e_error_upper',double(-9e+40)),...
'species',{{struct(...
'charge_norm',double(-9e+40),...
'charge_norm_error_index',int32(-999999999),...
@@ -181,7 +250,7 @@ struct(...
'velocity_tor_gradient_norm_error_index',int32(-999999999),...
'velocity_tor_gradient_norm_error_lower',double(-9e+40),...
'velocity_tor_gradient_norm_error_upper',double(-9e+40))
-;}},...
+}},...
'species_all',struct(...
'beta_reference',double(-9e+40),...
'beta_reference_error_index',int32(-999999999),...
@@ -206,7 +275,7 @@ struct(...
'tag',{{struct(...
'comment','',...
'name','')
-;}},...
+}},...
'time',double([]),...
'wavevector',{{struct(...
'binormal_component_norm',double(-9e+40),...
@@ -214,14 +283,10 @@ struct(...
'binormal_component_norm_error_lower',double(-9e+40),...
'binormal_component_norm_error_upper',double(-9e+40),...
'eigenmode',{{struct(...
-'a_field_parallel_perturbed_norm_imaginary',double([]),...
-'a_field_parallel_perturbed_norm_imaginary_error_index',int32(-999999999),...
-'a_field_parallel_perturbed_norm_imaginary_error_lower',double([]),...
-'a_field_parallel_perturbed_norm_imaginary_error_upper',double([]),...
-'a_field_parallel_perturbed_norm_real',double([]),...
-'a_field_parallel_perturbed_norm_real_error_index',int32(-999999999),...
-'a_field_parallel_perturbed_norm_real_error_lower',double([]),...
-'a_field_parallel_perturbed_norm_real_error_upper',double([]),...
+'a_field_parallel_perturbed_norm',double([]),...
+'a_field_parallel_perturbed_norm_error_index',int32(-999999999),...
+'a_field_parallel_perturbed_norm_error_lower',double([]),...
+'a_field_parallel_perturbed_norm_error_upper',double([]),...
'a_field_parallel_perturbed_parity',double([]),...
'a_field_parallel_perturbed_parity_error_index',int32(-999999999),...
'a_field_parallel_perturbed_parity_error_lower',double([]),...
@@ -230,14 +295,10 @@ struct(...
'a_field_parallel_perturbed_weight_error_index',int32(-999999999),...
'a_field_parallel_perturbed_weight_error_lower',double([]),...
'a_field_parallel_perturbed_weight_error_upper',double([]),...
-'b_field_parallel_perturbed_norm_imaginary',double([]),...
-'b_field_parallel_perturbed_norm_imaginary_error_index',int32(-999999999),...
-'b_field_parallel_perturbed_norm_imaginary_error_lower',double([]),...
-'b_field_parallel_perturbed_norm_imaginary_error_upper',double([]),...
-'b_field_parallel_perturbed_norm_real',double([]),...
-'b_field_parallel_perturbed_norm_real_error_index',int32(-999999999),...
-'b_field_parallel_perturbed_norm_real_error_lower',double([]),...
-'b_field_parallel_perturbed_norm_real_error_upper',double([]),...
+'b_field_parallel_perturbed_norm',double([]),...
+'b_field_parallel_perturbed_norm_error_index',int32(-999999999),...
+'b_field_parallel_perturbed_norm_error_lower',double([]),...
+'b_field_parallel_perturbed_norm_error_upper',double([]),...
'b_field_parallel_perturbed_parity',double([]),...
'b_field_parallel_perturbed_parity_error_index',int32(-999999999),...
'b_field_parallel_perturbed_parity_error_lower',double([]),...
@@ -246,8 +307,11 @@ struct(...
'b_field_parallel_perturbed_weight_error_index',int32(-999999999),...
'b_field_parallel_perturbed_weight_error_lower',double([]),...
'b_field_parallel_perturbed_weight_error_upper',double([]),...
+'code',struct(...
+'output_flag',int32(-999999999),...
+'parameters',''),...
'fluxes_moments',{{struct(...
-'fluxes_norm',struct(...
+'fluxes_norm_gyrocenter',struct(...
'energy_a_field_parallel',double(-9e+40),...
'energy_a_field_parallel_error_index',int32(-999999999),...
'energy_a_field_parallel_error_lower',double(-9e+40),...
@@ -296,72 +360,240 @@ struct(...
'particles_phi_potential_error_index',int32(-999999999),...
'particles_phi_potential_error_lower',double(-9e+40),...
'particles_phi_potential_error_upper',double(-9e+40)),...
-'moments_norm_rotating_frame',struct(...
-'density_gyroaveraged_imaginary',double([]),...
-'density_gyroaveraged_imaginary_error_index',int32(-999999999),...
-'density_gyroaveraged_imaginary_error_lower',double([]),...
-'density_gyroaveraged_imaginary_error_upper',double([]),...
-'density_gyroaveraged_real',double([]),...
-'density_gyroaveraged_real_error_index',int32(-999999999),...
-'density_gyroaveraged_real_error_lower',double([]),...
-'density_gyroaveraged_real_error_upper',double([]),...
-'density_imaginary',double([]),...
-'density_imaginary_error_index',int32(-999999999),...
-'density_imaginary_error_lower',double([]),...
-'density_imaginary_error_upper',double([]),...
-'density_real',double([]),...
-'density_real_error_index',int32(-999999999),...
-'density_real_error_lower',double([]),...
-'density_real_error_upper',double([]),...
-'temperature_parallel_gyroaveraged_imaginary',double([]),...
-'temperature_parallel_gyroaveraged_imaginary_error_index',int32(-999999999),...
-'temperature_parallel_gyroaveraged_imaginary_error_lower',double([]),...
-'temperature_parallel_gyroaveraged_imaginary_error_upper',double([]),...
-'temperature_parallel_gyroaveraged_real',double([]),...
-'temperature_parallel_gyroaveraged_real_error_index',int32(-999999999),...
-'temperature_parallel_gyroaveraged_real_error_lower',double([]),...
-'temperature_parallel_gyroaveraged_real_error_upper',double([]),...
-'temperature_parallel_imaginary',double([]),...
-'temperature_parallel_imaginary_error_index',int32(-999999999),...
-'temperature_parallel_imaginary_error_lower',double([]),...
-'temperature_parallel_imaginary_error_upper',double([]),...
-'temperature_parallel_real',double([]),...
-'temperature_parallel_real_error_index',int32(-999999999),...
-'temperature_parallel_real_error_lower',double([]),...
-'temperature_parallel_real_error_upper',double([]),...
-'temperature_perpendicular_gyroaveraged_imaginary',double([]),...
-'temperature_perpendicular_gyroaveraged_imaginary_error_index',int32(-999999999),...
-'temperature_perpendicular_gyroaveraged_imaginary_error_lower',double([]),...
-'temperature_perpendicular_gyroaveraged_imaginary_error_upper',double([]),...
-'temperature_perpendicular_gyroaveraged_real',double([]),...
-'temperature_perpendicular_gyroaveraged_real_error_index',int32(-999999999),...
-'temperature_perpendicular_gyroaveraged_real_error_lower',double([]),...
-'temperature_perpendicular_gyroaveraged_real_error_upper',double([]),...
-'temperature_perpendicular_imaginary',double([]),...
-'temperature_perpendicular_imaginary_error_index',int32(-999999999),...
-'temperature_perpendicular_imaginary_error_lower',double([]),...
-'temperature_perpendicular_imaginary_error_upper',double([]),...
-'temperature_perpendicular_real',double([]),...
-'temperature_perpendicular_real_error_index',int32(-999999999),...
-'temperature_perpendicular_real_error_lower',double([]),...
-'temperature_perpendicular_real_error_upper',double([]),...
-'velocity_parallel_gyroaveraged_imaginary',double([]),...
-'velocity_parallel_gyroaveraged_imaginary_error_index',int32(-999999999),...
-'velocity_parallel_gyroaveraged_imaginary_error_lower',double([]),...
-'velocity_parallel_gyroaveraged_imaginary_error_upper',double([]),...
-'velocity_parallel_gyroaveraged_real',double([]),...
-'velocity_parallel_gyroaveraged_real_error_index',int32(-999999999),...
-'velocity_parallel_gyroaveraged_real_error_lower',double([]),...
-'velocity_parallel_gyroaveraged_real_error_upper',double([]),...
-'velocity_parallel_imaginary',double([]),...
-'velocity_parallel_imaginary_error_index',int32(-999999999),...
-'velocity_parallel_imaginary_error_lower',double([]),...
-'velocity_parallel_imaginary_error_upper',double([]),...
-'velocity_parallel_real',double([]),...
-'velocity_parallel_real_error_index',int32(-999999999),...
-'velocity_parallel_real_error_lower',double([]),...
-'velocity_parallel_real_error_upper',double([])))
-;}},...
+'fluxes_norm_gyrocenter_rotating_frame',struct(...
+'energy_a_field_parallel',double(-9e+40),...
+'energy_a_field_parallel_error_index',int32(-999999999),...
+'energy_a_field_parallel_error_lower',double(-9e+40),...
+'energy_a_field_parallel_error_upper',double(-9e+40),...
+'energy_b_field_parallel',double(-9e+40),...
+'energy_b_field_parallel_error_index',int32(-999999999),...
+'energy_b_field_parallel_error_lower',double(-9e+40),...
+'energy_b_field_parallel_error_upper',double(-9e+40),...
+'energy_phi_potential',double(-9e+40),...
+'energy_phi_potential_error_index',int32(-999999999),...
+'energy_phi_potential_error_lower',double(-9e+40),...
+'energy_phi_potential_error_upper',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_parallel_a_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_parallel_b_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_parallel_phi_potential',double(-9e+40),...
+'momentum_tor_parallel_phi_potential_error_index',int32(-999999999),...
+'momentum_tor_parallel_phi_potential_error_lower',double(-9e+40),...
+'momentum_tor_parallel_phi_potential_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_a_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_b_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_phi_potential_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential_error_upper',double(-9e+40),...
+'particles_a_field_parallel',double(-9e+40),...
+'particles_a_field_parallel_error_index',int32(-999999999),...
+'particles_a_field_parallel_error_lower',double(-9e+40),...
+'particles_a_field_parallel_error_upper',double(-9e+40),...
+'particles_b_field_parallel',double(-9e+40),...
+'particles_b_field_parallel_error_index',int32(-999999999),...
+'particles_b_field_parallel_error_lower',double(-9e+40),...
+'particles_b_field_parallel_error_upper',double(-9e+40),...
+'particles_phi_potential',double(-9e+40),...
+'particles_phi_potential_error_index',int32(-999999999),...
+'particles_phi_potential_error_lower',double(-9e+40),...
+'particles_phi_potential_error_upper',double(-9e+40)),...
+'fluxes_norm_particle',struct(...
+'energy_a_field_parallel',double(-9e+40),...
+'energy_a_field_parallel_error_index',int32(-999999999),...
+'energy_a_field_parallel_error_lower',double(-9e+40),...
+'energy_a_field_parallel_error_upper',double(-9e+40),...
+'energy_b_field_parallel',double(-9e+40),...
+'energy_b_field_parallel_error_index',int32(-999999999),...
+'energy_b_field_parallel_error_lower',double(-9e+40),...
+'energy_b_field_parallel_error_upper',double(-9e+40),...
+'energy_phi_potential',double(-9e+40),...
+'energy_phi_potential_error_index',int32(-999999999),...
+'energy_phi_potential_error_lower',double(-9e+40),...
+'energy_phi_potential_error_upper',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_parallel_a_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_parallel_b_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_parallel_phi_potential',double(-9e+40),...
+'momentum_tor_parallel_phi_potential_error_index',int32(-999999999),...
+'momentum_tor_parallel_phi_potential_error_lower',double(-9e+40),...
+'momentum_tor_parallel_phi_potential_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_a_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_b_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_phi_potential_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential_error_upper',double(-9e+40),...
+'particles_a_field_parallel',double(-9e+40),...
+'particles_a_field_parallel_error_index',int32(-999999999),...
+'particles_a_field_parallel_error_lower',double(-9e+40),...
+'particles_a_field_parallel_error_upper',double(-9e+40),...
+'particles_b_field_parallel',double(-9e+40),...
+'particles_b_field_parallel_error_index',int32(-999999999),...
+'particles_b_field_parallel_error_lower',double(-9e+40),...
+'particles_b_field_parallel_error_upper',double(-9e+40),...
+'particles_phi_potential',double(-9e+40),...
+'particles_phi_potential_error_index',int32(-999999999),...
+'particles_phi_potential_error_lower',double(-9e+40),...
+'particles_phi_potential_error_upper',double(-9e+40)),...
+'fluxes_norm_particle_rotating_frame',struct(...
+'energy_a_field_parallel',double(-9e+40),...
+'energy_a_field_parallel_error_index',int32(-999999999),...
+'energy_a_field_parallel_error_lower',double(-9e+40),...
+'energy_a_field_parallel_error_upper',double(-9e+40),...
+'energy_b_field_parallel',double(-9e+40),...
+'energy_b_field_parallel_error_index',int32(-999999999),...
+'energy_b_field_parallel_error_lower',double(-9e+40),...
+'energy_b_field_parallel_error_upper',double(-9e+40),...
+'energy_phi_potential',double(-9e+40),...
+'energy_phi_potential_error_index',int32(-999999999),...
+'energy_phi_potential_error_lower',double(-9e+40),...
+'energy_phi_potential_error_upper',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_parallel_a_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_parallel_a_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_parallel_b_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_parallel_b_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_parallel_phi_potential',double(-9e+40),...
+'momentum_tor_parallel_phi_potential_error_index',int32(-999999999),...
+'momentum_tor_parallel_phi_potential_error_lower',double(-9e+40),...
+'momentum_tor_parallel_phi_potential_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_a_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_a_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_b_field_parallel_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_b_field_parallel_error_upper',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential_error_index',int32(-999999999),...
+'momentum_tor_perpendicular_phi_potential_error_lower',double(-9e+40),...
+'momentum_tor_perpendicular_phi_potential_error_upper',double(-9e+40),...
+'particles_a_field_parallel',double(-9e+40),...
+'particles_a_field_parallel_error_index',int32(-999999999),...
+'particles_a_field_parallel_error_lower',double(-9e+40),...
+'particles_a_field_parallel_error_upper',double(-9e+40),...
+'particles_b_field_parallel',double(-9e+40),...
+'particles_b_field_parallel_error_index',int32(-999999999),...
+'particles_b_field_parallel_error_lower',double(-9e+40),...
+'particles_b_field_parallel_error_upper',double(-9e+40),...
+'particles_phi_potential',double(-9e+40),...
+'particles_phi_potential_error_index',int32(-999999999),...
+'particles_phi_potential_error_lower',double(-9e+40),...
+'particles_phi_potential_error_upper',double(-9e+40)),...
+'moments_norm_gyrocenter',struct(...
+'density',double([]),...
+'density_error_index',int32(-999999999),...
+'density_error_lower',double([]),...
+'density_error_upper',double([]),...
+'density_gyroav',double([]),...
+'density_gyroav_error_index',int32(-999999999),...
+'density_gyroav_error_lower',double([]),...
+'density_gyroav_error_upper',double([]),...
+'heat_flux_parallel',double([]),...
+'heat_flux_parallel_error_index',int32(-999999999),...
+'heat_flux_parallel_error_lower',double([]),...
+'heat_flux_parallel_error_upper',double([]),...
+'heat_flux_parallel_gyroav',double([]),...
+'heat_flux_parallel_gyroav_error_index',int32(-999999999),...
+'heat_flux_parallel_gyroav_error_lower',double([]),...
+'heat_flux_parallel_gyroav_error_upper',double([]),...
+'j_parallel',double([]),...
+'j_parallel_error_index',int32(-999999999),...
+'j_parallel_error_lower',double([]),...
+'j_parallel_error_upper',double([]),...
+'j_parallel_gyroav',double([]),...
+'j_parallel_gyroav_error_index',int32(-999999999),...
+'j_parallel_gyroav_error_lower',double([]),...
+'j_parallel_gyroav_error_upper',double([]),...
+'pressure_parallel',double([]),...
+'pressure_parallel_error_index',int32(-999999999),...
+'pressure_parallel_error_lower',double([]),...
+'pressure_parallel_error_upper',double([]),...
+'pressure_parallel_gyroav',double([]),...
+'pressure_parallel_gyroav_error_index',int32(-999999999),...
+'pressure_parallel_gyroav_error_lower',double([]),...
+'pressure_parallel_gyroav_error_upper',double([]),...
+'pressure_perpendicular',double([]),...
+'pressure_perpendicular_error_index',int32(-999999999),...
+'pressure_perpendicular_error_lower',double([]),...
+'pressure_perpendicular_error_upper',double([]),...
+'pressure_perpendicular_gyroav',double([]),...
+'pressure_perpendicular_gyroav_error_index',int32(-999999999),...
+'pressure_perpendicular_gyroav_error_lower',double([]),...
+'pressure_perpendicular_gyroav_error_upper',double([]),...
+'v_parallel_energy_perpendicular',double([]),...
+'v_parallel_energy_perpendicular_error_index',int32(-999999999),...
+'v_parallel_energy_perpendicular_error_lower',double([]),...
+'v_parallel_energy_perpendicular_error_upper',double([]),...
+'v_parallel_energy_perpendicular_gyroav',double([]),...
+'v_parallel_energy_perpendicular_gyroav_error_index',int32(-999999999),...
+'v_parallel_energy_perpendicular_gyroav_error_lower',double([]),...
+'v_parallel_energy_perpendicular_gyroav_error_upper',double([]),...
+'v_perpendicular_square_energy',double([]),...
+'v_perpendicular_square_energy_error_index',int32(-999999999),...
+'v_perpendicular_square_energy_error_lower',double([]),...
+'v_perpendicular_square_energy_error_upper',double([]),...
+'v_perpendicular_square_energy_gyroav',double([]),...
+'v_perpendicular_square_energy_gyroav_error_index',int32(-999999999),...
+'v_perpendicular_square_energy_gyroav_error_lower',double([]),...
+'v_perpendicular_square_energy_gyroav_error_upper',double([])),...
+'moments_norm_particle',struct(...
+'density',double([]),...
+'density_error_index',int32(-999999999),...
+'density_error_lower',double([]),...
+'density_error_upper',double([]),...
+'heat_flux_parallel',double([]),...
+'heat_flux_parallel_error_index',int32(-999999999),...
+'heat_flux_parallel_error_lower',double([]),...
+'heat_flux_parallel_error_upper',double([]),...
+'j_parallel',double([]),...
+'j_parallel_error_index',int32(-999999999),...
+'j_parallel_error_lower',double([]),...
+'j_parallel_error_upper',double([]),...
+'pressure_parallel',double([]),...
+'pressure_parallel_error_index',int32(-999999999),...
+'pressure_parallel_error_lower',double([]),...
+'pressure_parallel_error_upper',double([]),...
+'pressure_perpendicular',double([]),...
+'pressure_perpendicular_error_index',int32(-999999999),...
+'pressure_perpendicular_error_lower',double([]),...
+'pressure_perpendicular_error_upper',double([]),...
+'v_parallel_energy_perpendicular',double([]),...
+'v_parallel_energy_perpendicular_error_index',int32(-999999999),...
+'v_parallel_energy_perpendicular_error_lower',double([]),...
+'v_parallel_energy_perpendicular_error_upper',double([]),...
+'v_perpendicular_square_energy',double([]),...
+'v_perpendicular_square_energy_error_index',int32(-999999999),...
+'v_perpendicular_square_energy_error_lower',double([]),...
+'v_perpendicular_square_energy_error_upper',double([])))
+}},...
'frequency_norm',double(-9e+40),...
'frequency_norm_error_index',int32(-999999999),...
'frequency_norm_error_lower',double(-9e+40),...
@@ -374,14 +606,11 @@ struct(...
'growth_rate_tolerance_error_index',int32(-999999999),...
'growth_rate_tolerance_error_lower',double(-9e+40),...
'growth_rate_tolerance_error_upper',double(-9e+40),...
-'phi_potential_perturbed_norm_imaginary',double([]),...
-'phi_potential_perturbed_norm_imaginary_error_index',int32(-999999999),...
-'phi_potential_perturbed_norm_imaginary_error_lower',double([]),...
-'phi_potential_perturbed_norm_imaginary_error_upper',double([]),...
-'phi_potential_perturbed_norm_real',double([]),...
-'phi_potential_perturbed_norm_real_error_index',int32(-999999999),...
-'phi_potential_perturbed_norm_real_error_lower',double([]),...
-'phi_potential_perturbed_norm_real_error_upper',double([]),...
+'initial_value_run',int32(-999999999),...
+'phi_potential_perturbed_norm',double([]),...
+'phi_potential_perturbed_norm_error_index',int32(-999999999),...
+'phi_potential_perturbed_norm_error_lower',double([]),...
+'phi_potential_perturbed_norm_error_upper',double([]),...
'phi_potential_perturbed_parity',double([]),...
'phi_potential_perturbed_parity_error_index',int32(-999999999),...
'phi_potential_perturbed_parity_error_lower',double([]),...
@@ -394,14 +623,14 @@ struct(...
'poloidal_angle_error_index',int32(-999999999),...
'poloidal_angle_error_lower',double([]),...
'poloidal_angle_error_upper',double([]),...
+'poloidal_turns',int32(-999999999),...
'time_norm',double([]),...
'time_norm_error_index',int32(-999999999),...
'time_norm_error_lower',double([]),...
'time_norm_error_upper',double([]))
-;}},...
-'poloidal_turns',int32(-999999999),...
+}},...
'radial_component_norm',double(-9e+40),...
'radial_component_norm_error_index',int32(-999999999),...
'radial_component_norm_error_lower',double(-9e+40),...
'radial_component_norm_error_upper',double(-9e+40))
-;}});
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_hard_x_rays.m b/matlab/TCV_IMAS/ids_empty/ids_empty_hard_x_rays.m
index 92ba079c548ee909a80e9fcc65dfa42ffe695cee..61e56e66bb208ee1802c2300344141dbdc4be3d6 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_hard_x_rays.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_hard_x_rays.m
@@ -1,9 +1,11 @@
function S = ids_empty_hard_x_rays
% function S = ids_empty_hard_x_rays
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'aperture',{{struct(...
@@ -85,7 +87,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'detector',struct(...
'centre',struct(...
'phi',double(-9e+40),...
@@ -182,7 +184,7 @@ struct(...
'upper_bound_error_index',int32(-999999999),...
'upper_bound_error_lower',double(-9e+40),...
'upper_bound_error_upper',double(-9e+40))
-;}},...
+}},...
'etendue',double(-9e+40),...
'etendue_error_index',int32(-999999999),...
'etendue_error_lower',double(-9e+40),...
@@ -191,6 +193,126 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'filter_window',{{struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'geometry_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'identifier','',...
+'material',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'photon_absorption',double([]),...
+'photon_absorption_error_index',int32(-999999999),...
+'photon_absorption_error_lower',double([]),...
+'photon_absorption_error_upper',double([]),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40),...
+'wavelength_lower',double(-9e+40),...
+'wavelength_lower_error_index',int32(-999999999),...
+'wavelength_lower_error_lower',double(-9e+40),...
+'wavelength_lower_error_upper',double(-9e+40),...
+'wavelength_upper',double(-9e+40),...
+'wavelength_upper_error_index',int32(-999999999),...
+'wavelength_upper_error_lower',double(-9e+40),...
+'wavelength_upper_error_upper',double(-9e+40),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([]),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))
+}},...
'identifier','',...
'line_of_sight',struct(...
'first_point',struct(...
@@ -228,16 +350,18 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -274,15 +398,64 @@ struct(...
'upper_bound_error_lower',double(-9e+40),...
'upper_bound_error_upper',double(-9e+40),...
'validity_timed',int32([]))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_ic_antennas.m b/matlab/TCV_IMAS/ids_empty/ids_empty_ic_antennas.m
index 6cb2c72c6ae5be1dda1b57041c724de1f9222cba..daa95f4b11e0d980ead3abc35e671310e133684f 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_ic_antennas.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_ic_antennas.m
@@ -1,9 +1,11 @@
function S = ids_empty_ic_antennas
% function S = ids_empty_ic_antennas
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'antenna',{{struct(...
'frequency',struct(...
@@ -42,7 +44,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'frequency',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -68,7 +70,7 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'name','',...
'phase_forward',struct(...
'data',double([]),...
@@ -128,7 +130,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'reflection_coefficient',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -147,6 +149,23 @@ struct(...
'distance_to_conductor_error_lower',double(-9e+40),...
'distance_to_conductor_error_upper',double(-9e+40),...
'geometry',struct(...
+'annulus',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'radius_inner',double(-9e+40),...
+'radius_inner_error_index',int32(-999999999),...
+'radius_inner_error_lower',double(-9e+40),...
+'radius_inner_error_upper',double(-9e+40),...
+'radius_outer',double(-9e+40),...
+'radius_outer_error_index',int32(-999999999),...
+'radius_outer_error_lower',double(-9e+40),...
+'radius_outer_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'arcs_of_circle',struct(...
'curvature_radii',double([]),...
'curvature_radii_error_index',int32(-999999999),...
@@ -170,18 +189,18 @@ struct(...
'beta_error_index',int32(-999999999),...
'beta_error_lower',double(-9e+40),...
'beta_error_upper',double(-9e+40),...
-'length',double(-9e+40),...
-'length_error_index',int32(-999999999),...
-'length_error_lower',double(-9e+40),...
-'length_error_upper',double(-9e+40),...
+'length_alpha',double(-9e+40),...
+'length_alpha_error_index',int32(-999999999),...
+'length_alpha_error_lower',double(-9e+40),...
+'length_alpha_error_upper',double(-9e+40),...
+'length_beta',double(-9e+40),...
+'length_beta_error_index',int32(-999999999),...
+'length_beta_error_lower',double(-9e+40),...
+'length_beta_error_upper',double(-9e+40),...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
'r_error_lower',double(-9e+40),...
'r_error_upper',double(-9e+40),...
-'thickness',double(-9e+40),...
-'thickness_error_index',int32(-999999999),...
-'thickness_error_lower',double(-9e+40),...
-'thickness_error_upper',double(-9e+40),...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
@@ -211,7 +230,30 @@ struct(...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
-'z_error_upper',double(-9e+40))),...
+'z_error_upper',double(-9e+40)),...
+'thick_line',struct(...
+'first_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40))),...
'outline',struct(...
'phi',double([]),...
'phi_error_index',int32(-999999999),...
@@ -235,7 +277,7 @@ struct(...
'width_tor_error_index',int32(-999999999),...
'width_tor_error_lower',double(-9e+40),...
'width_tor_error_upper',double(-9e+40))
-;}},...
+}},...
'voltage',{{struct(...
'amplitude',struct(...
'data',double([]),...
@@ -264,8 +306,8 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}})
-;}},...
+}})
+}},...
'name','',...
'power_forward',struct(...
'data',double([]),...
@@ -293,17 +335,19 @@ struct(...
'spectrum_error_lower',double([]),...
'spectrum_error_upper',double([]),...
'time',double(-9e+40))
-;}})
-;}},...
+}})
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -313,12 +357,67 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'power_launched',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
'reference_point',struct(...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_interferometer.m b/matlab/TCV_IMAS/ids_empty/ids_empty_interferometer.m
index e344feac9515ae8ace841fcf53d38e4e00f5f20d..5f98a86278f8aee5bd212b2dd5c601bb0a12b725 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_interferometer.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_interferometer.m
@@ -1,9 +1,11 @@
function S = ids_empty_interferometer
% function S = ids_empty_interferometer
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'identifier','',...
@@ -90,17 +92,19 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}})
-;}},...
+}})
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -118,12 +122,61 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'n_e_volume_average',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_iron_core.m b/matlab/TCV_IMAS/ids_empty/ids_empty_iron_core.m
index fc6c8873361a5d3b31cfbe04ba57ffe94837db12..f6e2159c4c13c113f4ef9a81566d189e7106c53e 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_iron_core.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_iron_core.m
@@ -1,19 +1,23 @@
function S = ids_empty_iron_core
% function S = ids_empty_iron_core
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,6 +27,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -35,6 +84,23 @@ struct(...
'b_field_error_lower',double([]),...
'b_field_error_upper',double([]),...
'geometry',struct(...
+'annulus',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'radius_inner',double(-9e+40),...
+'radius_inner_error_index',int32(-999999999),...
+'radius_inner_error_lower',double(-9e+40),...
+'radius_inner_error_upper',double(-9e+40),...
+'radius_outer',double(-9e+40),...
+'radius_outer_error_index',int32(-999999999),...
+'radius_outer_error_lower',double(-9e+40),...
+'radius_outer_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'arcs_of_circle',struct(...
'curvature_radii',double([]),...
'curvature_radii_error_index',int32(-999999999),...
@@ -58,18 +124,18 @@ struct(...
'beta_error_index',int32(-999999999),...
'beta_error_lower',double(-9e+40),...
'beta_error_upper',double(-9e+40),...
-'length',double(-9e+40),...
-'length_error_index',int32(-999999999),...
-'length_error_lower',double(-9e+40),...
-'length_error_upper',double(-9e+40),...
+'length_alpha',double(-9e+40),...
+'length_alpha_error_index',int32(-999999999),...
+'length_alpha_error_lower',double(-9e+40),...
+'length_alpha_error_upper',double(-9e+40),...
+'length_beta',double(-9e+40),...
+'length_beta_error_index',int32(-999999999),...
+'length_beta_error_lower',double(-9e+40),...
+'length_beta_error_upper',double(-9e+40),...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
'r_error_lower',double(-9e+40),...
'r_error_upper',double(-9e+40),...
-'thickness',double(-9e+40),...
-'thickness_error_index',int32(-999999999),...
-'thickness_error_lower',double(-9e+40),...
-'thickness_error_upper',double(-9e+40),...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
@@ -99,7 +165,30 @@ struct(...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
-'z_error_upper',double(-9e+40))),...
+'z_error_upper',double(-9e+40)),...
+'thick_line',struct(...
+'first_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40))),...
'identifier','',...
'magnetisation_r',struct(...
'data',double([]),...
@@ -118,5 +207,5 @@ struct(...
'permeability_relative_error_index',int32(-999999999),...
'permeability_relative_error_lower',double([]),...
'permeability_relative_error_upper',double([]))
-;}},...
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_langmuir_probes.m b/matlab/TCV_IMAS/ids_empty/ids_empty_langmuir_probes.m
index 3397b1848a2df1673e5cfb296ff9134cb2bc5d01..b6222b346d518cc6c459046996d426df05abe8f6 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_langmuir_probes.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_langmuir_probes.m
@@ -1,19 +1,23 @@
function S = ids_empty_langmuir_probes
% function S = ids_empty_langmuir_probes
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -27,7 +31,14 @@ struct(...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
-'distance_separatrix',struct(...
+'distance_separatrix_midplane',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'fluence',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
@@ -56,6 +67,41 @@ struct(...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
+'j_i_parallel_sigma',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'j_i_saturation',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'j_i_saturation_kurtosis',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'j_i_saturation_sigma',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'j_i_saturation_skew',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
'multi_temperature_fits',{{struct(...
't_e',struct(...
'data',double([]),...
@@ -72,7 +118,7 @@ struct(...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
'time',double([]))
-;}},...
+}},...
'n_e',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -127,6 +173,13 @@ struct(...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
+'v_floating_sigma',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
'v_plasma',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -134,17 +187,79 @@ struct(...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
+'equilibrium_id',struct(...
+'data_entry',struct(...
+'machine','',...
+'pulse',int32(-999999999),...
+'pulse_type','',...
+'run',int32(-999999999),...
+'user',''),...
+'name','',...
+'occurrence',int32(-999999999)),...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'reciprocating',{{struct(...
'identifier','',...
'name','',...
@@ -171,6 +286,13 @@ struct(...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
+'j_i_kurtosis',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
'j_i_parallel',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -178,6 +300,27 @@ struct(...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
+'j_i_saturation',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'j_i_sigma',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'j_i_skew',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
'position',struct(...
'phi',double([]),...
'phi_error_index',int32(-999999999),...
@@ -213,9 +356,23 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'v_floating_sigma',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
-'distance_separatrix',struct(...
+}},...
+'distance_separatrix_midplane',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])),...
+'distance_x_point_z',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
@@ -277,10 +434,10 @@ struct(...
'data_error_upper',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'surface_area',double([]),...
'surface_area_error_index',int32(-999999999),...
'surface_area_error_lower',double([]),...
'surface_area_error_upper',double([]))
-;}},...
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_lh_antennas.m b/matlab/TCV_IMAS/ids_empty/ids_empty_lh_antennas.m
index 314c635bdcf73468d42a8565d4674e85a2935919..82a5c1a219931c5ddefd88b052740fab96e8a857 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_lh_antennas.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_lh_antennas.m
@@ -1,9 +1,11 @@
function S = ids_empty_lh_antennas
% function S = ids_empty_lh_antennas
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'antenna',{{struct(...
'distance_to_antenna',double([]),...
@@ -49,7 +51,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'n_e',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -152,17 +154,19 @@ struct(...
'power_density_spectrum_2d_error_lower',double([]),...
'power_density_spectrum_2d_error_upper',double([]),...
'time',double([]))
-;}})
-;}},...
+}})
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -172,18 +176,73 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'power',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])),...
+'power_launched',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
'reference_point',struct(...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_magnetics.m b/matlab/TCV_IMAS/ids_empty/ids_empty_magnetics.m
index b21a9853c3821a5e461e95cc3637410f7eb5189f..f0f8c9e907e60afa245a78b0d28c1e6be4e77ca6 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_magnetics.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_magnetics.m
@@ -1,9 +1,11 @@
function S = ids_empty_magnetics
% function S = ids_empty_magnetics
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'b_field_pol_probe',{{struct(...
'area',double(-9e+40),...
@@ -72,7 +74,7 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'b_field_tor_probe',{{struct(...
'area',double(-9e+40),...
'area_error_index',int32(-999999999),...
@@ -140,7 +142,7 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'bpol_probe',{{struct(...
'area',double(-9e+40),...
'area_error_index',int32(-999999999),...
@@ -208,16 +210,18 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -230,7 +234,7 @@ struct(...
'data_error_upper',double([]),...
'method_name','',...
'time',double([]))
-;}},...
+}},...
'flux_loop',{{struct(...
'area',double(-9e+40),...
'area_error_index',int32(-999999999),...
@@ -264,7 +268,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}},...
+}},...
'type',struct(...
'description','',...
'index',int32(-999999999),...
@@ -277,11 +281,56 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -295,7 +344,11 @@ struct(...
'data_error_upper',double([]),...
'method_name','',...
'time',double([]))
-;}},...
+}},...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'method',{{struct(...
'ip',struct(...
'data',double([]),...
@@ -304,7 +357,7 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'name','')
-;}},...
+}},...
'rogowski_coil',{{struct(...
'area',double(-9e+40),...
'area_error_index',int32(-999999999),...
@@ -338,10 +391,48 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}},...
+}},...
'turns_per_metre',double(-9e+40),...
'turns_per_metre_error_index',int32(-999999999),...
'turns_per_metre_error_lower',double(-9e+40),...
'turns_per_metre_error_upper',double(-9e+40))
-;}},...
+}},...
+'shunt',{{struct(...
+'divertor_index',int32(-999999999),...
+'identifier','',...
+'name','',...
+'position',struct(...
+'first_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'resistance',double(-9e+40),...
+'resistance_error_index',int32(-999999999),...
+'resistance_error_lower',double(-9e+40),...
+'resistance_error_upper',double(-9e+40),...
+'target_index',int32(-999999999),...
+'tile_index',int32(-999999999),...
+'voltage',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([])))
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_mhd.m b/matlab/TCV_IMAS/ids_empty/ids_empty_mhd.m
index ccb314981efdf7fb554ad9c0466e9be76107e26a..4f9bcc8a1f0dd3591bb0edf3be290e00116cebb8 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_mhd.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_mhd.m
@@ -1,19 +1,23 @@
function S = ids_empty_mhd
% function S = ids_empty_mhd
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -31,7 +35,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'a_field_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -43,7 +47,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'a_field_z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -55,7 +59,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_r',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -67,7 +71,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -79,7 +83,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -91,7 +95,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'electrons',struct(...
'temperature',{{struct(...
'coefficients',double([]),...
@@ -104,7 +108,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}}),...
'j_r',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -116,7 +120,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'j_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -128,7 +132,19 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'j_tor_r',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'j_z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -140,7 +156,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'mass_density',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -152,7 +168,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'n_i_total',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -164,7 +180,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'phi_potential',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -176,7 +192,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'psi',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -188,7 +204,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
't_i_average',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -200,7 +216,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'time',double(-9e+40),...
'velocity_parallel',{{struct(...
'coefficients',double([]),...
@@ -213,7 +229,19 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'velocity_parallel_over_b_field',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'velocity_r',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -225,7 +253,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'velocity_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -237,7 +265,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'velocity_z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -249,7 +277,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'vorticity',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -261,7 +289,19 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
+'vorticity_over_r',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
'zeff',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -273,8 +313,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}})
-;}},...
+}})
+}},...
'grid_ggd',{{struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -290,15 +330,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -316,11 +356,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -332,12 +373,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -346,15 +395,60 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}},...
+}})
+}})
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_mhd_linear.m b/matlab/TCV_IMAS/ids_empty/ids_empty_mhd_linear.m
index 99597a70c5837fa2d5de6100bb85d934281d673c..6cae756580a7015bfea8b0c67f91d7a390101783 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_mhd_linear.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_mhd_linear.m
@@ -1,19 +1,23 @@
function S = ids_empty_mhd_linear
% function S = ids_empty_mhd_linear
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -29,6 +33,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -138,7 +187,7 @@ struct(...
'real_error_index',int32(-999999999),...
'real_error_lower',double([]),...
'real_error_upper',double([]))
-;}},...
+}},...
'b_field_perturbed',struct(...
'coordinate1',struct(...
'coefficients_imaginary',double([]),...
@@ -616,8 +665,8 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name','')))
-;}})
-;}},...
+}})
+}},...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
'b0_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_mse.m b/matlab/TCV_IMAS/ids_empty/ids_empty_mse.m
index 46e67aa67f11dc958923628da69343cb5e26db58..569ffed4fa8908c637c43d596a2db8d226aa3451 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_mse.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_mse.m
@@ -1,9 +1,11 @@
function S = ids_empty_mse
% function S = ids_empty_mse
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'active_spatial_resolution',{{struct(...
@@ -38,7 +40,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'aperture',{{struct(...
'centre',struct(...
'phi',double(-9e+40),...
@@ -118,7 +120,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'detector',struct(...
'centre',struct(...
'phi',double(-9e+40),...
@@ -234,16 +236,18 @@ struct(...
'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -253,10 +257,59 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_nbi.m b/matlab/TCV_IMAS/ids_empty/ids_empty_nbi.m
index 1c8de675aa767bd6c1f6ab969d88c6d74e29eae8..36345eeacf455fbd5935dda9a8d9da233e568a9f 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_nbi.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_nbi.m
@@ -1,19 +1,23 @@
function S = ids_empty_nbi
% function S = ids_empty_nbi
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,12 +27,61 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]),...
'unit',{{struct(...
'aperture',{{struct(...
@@ -110,7 +163,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'beam_current_fraction',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -168,7 +221,7 @@ struct(...
'vertical_error_index',int32(-999999999),...
'vertical_error_lower',double(-9e+40),...
'vertical_error_upper',double(-9e+40))
-;}},...
+}},...
'focus',struct(...
'focal_length_horizontal',double(-9e+40),...
'focal_length_horizontal_error_index',int32(-999999999),...
@@ -226,7 +279,7 @@ struct(...
'delta_tangency_radius_error_lower',double(-9e+40),...
'delta_tangency_radius_error_upper',double(-9e+40),...
'time',double(-9e+40))
-;}},...
+}},...
'width_horizontal',double(-9e+40),...
'width_horizontal_error_index',int32(-999999999),...
'width_horizontal_error_lower',double(-9e+40),...
@@ -235,7 +288,7 @@ struct(...
'width_vertical_error_index',int32(-999999999),...
'width_vertical_error_lower',double(-9e+40),...
'width_vertical_error_upper',double(-9e+40))
-;}},...
+}},...
'energy',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -339,4 +392,4 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40)))
-;}});
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_neutron_diagnostic.m b/matlab/TCV_IMAS/ids_empty/ids_empty_neutron_diagnostic.m
index 36473c4687f64019e97b2740dcf8595ba135d01e..0086f0c77e3ffe76d82594b62797c82b1f927dbc 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_neutron_diagnostic.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_neutron_diagnostic.m
@@ -1,9 +1,11 @@
function S = ids_empty_neutron_diagnostic
% function S = ids_empty_neutron_diagnostic
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'characteristics',struct(...
'dead_time',double(-9e+40),...
@@ -22,30 +24,26 @@ struct(...
'index',int32(-999999999),...
'mode',{{struct(...
'count_limit_max',double(-9e+40),...
-'count_limit_max_error_index',int32(-999999999),...
-'count_limit_max_error_lower',double(-9e+40),...
-'count_limit_max_error_upper',double(-9e+40),...
'count_limit_min',double(-9e+40),...
-'count_limit_min_error_index',int32(-999999999),...
-'count_limit_min_error_lower',double(-9e+40),...
-'count_limit_min_error_upper',double(-9e+40),...
'index',int32(-999999999),...
'name','')
-;}},...
+}},...
'probability_overlap',double(-9e+40),...
'probability_overlap_error_index',int32(-999999999),...
'probability_overlap_error_lower',double(-9e+40),...
'probability_overlap_error_upper',double(-9e+40))
-;}}),...
+}}),...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -160,7 +158,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'b_field_sensor',struct(...
'amplitude',struct(...
'data',double([]),...
@@ -287,7 +285,7 @@ struct(...
'upper_bound_error_index',int32(-999999999),...
'upper_bound_error_lower',double(-9e+40),...
'upper_bound_error_upper',double(-9e+40))
-;}},...
+}},...
'field_of_view',struct(...
'direction_to_detector',struct(...
'x',double([]),...
@@ -320,7 +318,16 @@ struct(...
'solid_angle_error_lower',double([]),...
'solid_angle_error_upper',double([])),...
'green_functions',struct(...
-'event_in_detector',struct(...
+'event_in_detector_neutron_flux',struct(...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([])),...
+'event_in_detector_response_function',struct(...
'type',struct(...
'description','',...
'index',int32(-999999999),...
@@ -349,7 +356,7 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'name','')
-;}},...
+}},...
'name','',...
'position',struct(...
'phi',double(-9e+40),...
@@ -379,7 +386,7 @@ struct(...
'converter_volume_error_lower',double(-9e+40),...
'converter_volume_error_upper',double(-9e+40),...
'index',int32(-999999999))
-;}},...
+}},...
'spectrum',struct(...
'data',int32([]),...
'time',double([])),...
@@ -472,17 +479,66 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name','')))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'synthetic_signals',struct(...
'fusion_power',double([]),...
'fusion_power_error_index',int32(-999999999),...
@@ -504,7 +560,6 @@ struct(...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)),...
'radiation',{{struct(...
-'index',int32(-999999999),...
'reaction',{{struct(...
'd2flux_drdz',double([]),...
'd2flux_drdz_error_index',int32(-999999999),...
@@ -518,7 +573,6 @@ struct(...
'flux_error_index',int32(-999999999),...
'flux_error_lower',double([]),...
'flux_error_upper',double([]),...
-'index',int32(-999999999),...
'reaction_rate',double([]),...
'reaction_rate_error_index',int32(-999999999),...
'reaction_rate_error_lower',double([]),...
@@ -527,6 +581,6 @@ struct(...
'sensitivity_error_index',int32(-999999999),...
'sensitivity_error_lower',double([]),...
'sensitivity_error_upper',double([]))
-;}})
-;}})
-;}});
+}})
+}})
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_ntms.m b/matlab/TCV_IMAS/ids_empty/ids_empty_ntms.m
index c361ce625912c72b0dc25162a3ab36a81d8aaca7..9ec91e040f8d495833bd4cc646766df5e22adb0a 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_ntms.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_ntms.m
@@ -1,19 +1,23 @@
function S = ids_empty_ntms
% function S = ids_empty_ntms
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,6 +27,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -43,7 +92,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'detailed_evolution',struct(...
'calculation_method','',...
'delta_diff',double([]),...
@@ -56,7 +105,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'dfrequency_dt',double([]),...
'dfrequency_dt_error_index',int32(-999999999),...
'dfrequency_dt_error_lower',double([]),...
@@ -97,7 +146,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'width',double([]),...
'width_error_index',int32(-999999999),...
'width_error_lower',double([]),...
@@ -158,14 +207,14 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'width',double(-9e+40),...
'width_error_index',int32(-999999999),...
'width_error_lower',double(-9e+40),...
'width_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
'b0_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_numerics.m b/matlab/TCV_IMAS/ids_empty/ids_empty_numerics.m
deleted file mode 100644
index 2e792d44661b9e4fc27262b72e2cfb164e896ac2..0000000000000000000000000000000000000000
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_numerics.m
+++ /dev/null
@@ -1,30 +0,0 @@
-function S = ids_empty_numerics
-% function S = ids_empty_numerics
-%
-% File written automatically using struct2m.m
-
-S = ...
-struct(...
-'ids_properties',struct(...
-'comment','',...
-'creation_date','',...
-'homogeneous_time',int32(-999999999),...
-'provider','',...
-'source','',...
-'version_put',struct(...
-'access_layer','',...
-'access_layer_language','',...
-'data_dictionary','')),...
-'time',double([]),...
-'time_end',double([]),...
-'time_end_error_index',int32(-999999999),...
-'time_end_error_lower',double([]),...
-'time_end_error_upper',double([]),...
-'time_start',double([]),...
-'time_start_error_index',int32(-999999999),...
-'time_start_error_lower',double([]),...
-'time_start_error_upper',double([]),...
-'time_step',double([]),...
-'time_step_error_index',int32(-999999999),...
-'time_step_error_lower',double([]),...
-'time_step_error_upper',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_pellets.m b/matlab/TCV_IMAS/ids_empty/ids_empty_pellets.m
index 7b27991a856f8ca1eea719ac01b18d655c0a8884..9b4288dce6a592eae2c53795193033c5cb48f913 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_pellets.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_pellets.m
@@ -1,19 +1,23 @@
function S = ids_empty_pellets
% function S = ids_empty_pellets
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,12 +27,61 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]),...
'time_slice',{{struct(...
'pellet',{{struct(...
@@ -124,7 +177,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'molecules_n',double(-9e+40),...
'molecules_n_error_index',int32(-999999999),...
@@ -161,11 +214,11 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'velocity_initial',double(-9e+40),...
'velocity_initial_error_index',int32(-999999999),...
'velocity_initial_error_lower',double(-9e+40),...
'velocity_initial_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}});
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_pf_active.m b/matlab/TCV_IMAS/ids_empty/ids_empty_pf_active.m
index 0f5f29e759bf11f98515735f1643270dba48df7d..0c5db01eb0d63c5ff9346e2d390751b5a1e9bcf3 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_pf_active.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_pf_active.m
@@ -1,9 +1,11 @@
function S = ids_empty_pf_active
% function S = ids_empty_pf_active
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'circuit',{{struct(...
'connections',int32([]),...
@@ -22,16 +24,18 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -55,15 +59,29 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'current_limit_max',double([]),...
-'current_limit_max_error_index',int32(-999999999),...
-'current_limit_max_error_lower',double([]),...
-'current_limit_max_error_upper',double([]),...
'element',{{struct(...
'area',double(-9e+40),...
'area_error_index',int32(-999999999),...
'area_error_lower',double(-9e+40),...
'area_error_upper',double(-9e+40),...
'geometry',struct(...
+'annulus',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'radius_inner',double(-9e+40),...
+'radius_inner_error_index',int32(-999999999),...
+'radius_inner_error_lower',double(-9e+40),...
+'radius_inner_error_upper',double(-9e+40),...
+'radius_outer',double(-9e+40),...
+'radius_outer_error_index',int32(-999999999),...
+'radius_outer_error_lower',double(-9e+40),...
+'radius_outer_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'arcs_of_circle',struct(...
'curvature_radii',double([]),...
'curvature_radii_error_index',int32(-999999999),...
@@ -87,18 +105,18 @@ struct(...
'beta_error_index',int32(-999999999),...
'beta_error_lower',double(-9e+40),...
'beta_error_upper',double(-9e+40),...
-'length',double(-9e+40),...
-'length_error_index',int32(-999999999),...
-'length_error_lower',double(-9e+40),...
-'length_error_upper',double(-9e+40),...
+'length_alpha',double(-9e+40),...
+'length_alpha_error_index',int32(-999999999),...
+'length_alpha_error_lower',double(-9e+40),...
+'length_alpha_error_upper',double(-9e+40),...
+'length_beta',double(-9e+40),...
+'length_beta_error_index',int32(-999999999),...
+'length_beta_error_lower',double(-9e+40),...
+'length_beta_error_upper',double(-9e+40),...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
'r_error_lower',double(-9e+40),...
'r_error_upper',double(-9e+40),...
-'thickness',double(-9e+40),...
-'thickness_error_index',int32(-999999999),...
-'thickness_error_lower',double(-9e+40),...
-'thickness_error_upper',double(-9e+40),...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
@@ -128,21 +146,52 @@ struct(...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
-'z_error_upper',double(-9e+40))),...
+'z_error_upper',double(-9e+40)),...
+'thick_line',struct(...
+'first_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40))),...
'identifier','',...
'name','',...
'turns_with_sign',double(-9e+40),...
'turns_with_sign_error_index',int32(-999999999),...
'turns_with_sign_error_lower',double(-9e+40),...
'turns_with_sign_error_upper',double(-9e+40))
-;}},...
+}},...
'energy_limit_max',double(-9e+40),...
-'energy_limit_max_error_index',int32(-999999999),...
-'energy_limit_max_error_lower',double(-9e+40),...
-'energy_limit_max_error_upper',double(-9e+40),...
+'function',{{struct(...
+'description','',...
+'index',int32(-999999999),...
+'name','')
+}},...
'identifier','',...
'name','',...
'resistance',double(-9e+40),...
+'resistance_additional',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
'resistance_error_index',int32(-999999999),...
'resistance_error_lower',double(-9e+40),...
'resistance_error_upper',double(-9e+40),...
@@ -156,17 +205,66 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'radial_force',{{struct(...
'combination',double([]),...
'combination_error_index',int32(-999999999),...
@@ -187,7 +285,7 @@ struct(...
'limit_min_error_lower',double(-9e+40),...
'limit_min_error_upper',double(-9e+40),...
'name','')
-;}},...
+}},...
'supply',{{struct(...
'current',struct(...
'data',double([]),...
@@ -196,13 +294,7 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'current_limit_max',double(-9e+40),...
-'current_limit_max_error_index',int32(-999999999),...
-'current_limit_max_error_lower',double(-9e+40),...
-'current_limit_max_error_upper',double(-9e+40),...
'current_limit_min',double(-9e+40),...
-'current_limit_min_error_index',int32(-999999999),...
-'current_limit_min_error_lower',double(-9e+40),...
-'current_limit_min_error_upper',double(-9e+40),...
'current_limiter_gain',double(-9e+40),...
'current_limiter_gain_error_index',int32(-999999999),...
'current_limiter_gain_error_lower',double(-9e+40),...
@@ -212,9 +304,6 @@ struct(...
'delay_error_lower',double(-9e+40),...
'delay_error_upper',double(-9e+40),...
'energy_limit_max',double(-9e+40),...
-'energy_limit_max_error_index',int32(-999999999),...
-'energy_limit_max_error_lower',double(-9e+40),...
-'energy_limit_max_error_upper',double(-9e+40),...
'filter_denominator',double([]),...
'filter_denominator_error_index',int32(-999999999),...
'filter_denominator_error_lower',double([]),...
@@ -238,14 +327,8 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'voltage_limit_max',double(-9e+40),...
-'voltage_limit_max_error_index',int32(-999999999),...
-'voltage_limit_max_error_lower',double(-9e+40),...
-'voltage_limit_max_error_upper',double(-9e+40),...
-'voltage_limit_min',double(-9e+40),...
-'voltage_limit_min_error_index',int32(-999999999),...
-'voltage_limit_min_error_lower',double(-9e+40),...
-'voltage_limit_min_error_upper',double(-9e+40))
-;}},...
+'voltage_limit_min',double(-9e+40))
+}},...
'time',double([]),...
'vertical_force',{{struct(...
'combination',double([]),...
@@ -267,4 +350,4 @@ struct(...
'limit_min_error_lower',double(-9e+40),...
'limit_min_error_upper',double(-9e+40),...
'name','')
-;}});
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_pf_passive.m b/matlab/TCV_IMAS/ids_empty/ids_empty_pf_passive.m
index ab22c5c5e4948dc6d5c8a2c327a5c5fc5a0bc16d..514828e27c1a172adf86674e0408506a72d3f72d 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_pf_passive.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_pf_passive.m
@@ -1,19 +1,23 @@
function S = ids_empty_pf_passive
% function S = ids_empty_pf_passive
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -23,6 +27,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -40,6 +89,23 @@ struct(...
'area_error_lower',double(-9e+40),...
'area_error_upper',double(-9e+40),...
'geometry',struct(...
+'annulus',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'radius_inner',double(-9e+40),...
+'radius_inner_error_index',int32(-999999999),...
+'radius_inner_error_lower',double(-9e+40),...
+'radius_inner_error_upper',double(-9e+40),...
+'radius_outer',double(-9e+40),...
+'radius_outer_error_index',int32(-999999999),...
+'radius_outer_error_lower',double(-9e+40),...
+'radius_outer_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'arcs_of_circle',struct(...
'curvature_radii',double([]),...
'curvature_radii_error_index',int32(-999999999),...
@@ -63,18 +129,18 @@ struct(...
'beta_error_index',int32(-999999999),...
'beta_error_lower',double(-9e+40),...
'beta_error_upper',double(-9e+40),...
-'length',double(-9e+40),...
-'length_error_index',int32(-999999999),...
-'length_error_lower',double(-9e+40),...
-'length_error_upper',double(-9e+40),...
+'length_alpha',double(-9e+40),...
+'length_alpha_error_index',int32(-999999999),...
+'length_alpha_error_lower',double(-9e+40),...
+'length_alpha_error_upper',double(-9e+40),...
+'length_beta',double(-9e+40),...
+'length_beta_error_index',int32(-999999999),...
+'length_beta_error_lower',double(-9e+40),...
+'length_beta_error_upper',double(-9e+40),...
'r',double(-9e+40),...
'r_error_index',int32(-999999999),...
'r_error_lower',double(-9e+40),...
'r_error_upper',double(-9e+40),...
-'thickness',double(-9e+40),...
-'thickness_error_index',int32(-999999999),...
-'thickness_error_lower',double(-9e+40),...
-'thickness_error_upper',double(-9e+40),...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
@@ -104,14 +170,37 @@ struct(...
'z',double(-9e+40),...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
-'z_error_upper',double(-9e+40))),...
+'z_error_upper',double(-9e+40)),...
+'thick_line',struct(...
+'first_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40))),...
'identifier','',...
'name','',...
'turns_with_sign',double(-9e+40),...
'turns_with_sign_error_index',int32(-999999999),...
'turns_with_sign_error_lower',double(-9e+40),...
'turns_with_sign_error_upper',double(-9e+40))
-;}},...
+}},...
'name','',...
'resistance',double(-9e+40),...
'resistance_error_index',int32(-999999999),...
@@ -122,5 +211,5 @@ struct(...
'resistivity_error_lower',double(-9e+40),...
'resistivity_error_upper',double(-9e+40),...
'time',double([]))
-;}},...
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_plasma_initiation.m b/matlab/TCV_IMAS/ids_empty/ids_empty_plasma_initiation.m
new file mode 100644
index 0000000000000000000000000000000000000000..5e066c24a9626d689d50bc94627bbf254d3f46dc
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_plasma_initiation.m
@@ -0,0 +1,197 @@
+function S = ids_empty_plasma_initiation
+% function S = ids_empty_plasma_initiation
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'b_field_lines',{{struct(...
+'e_field_parallel',double([]),...
+'e_field_parallel_error_index',int32(-999999999),...
+'e_field_parallel_error_lower',double([]),...
+'e_field_parallel_error_upper',double([]),...
+'e_field_townsend',double([]),...
+'e_field_townsend_error_index',int32(-999999999),...
+'e_field_townsend_error_lower',double([]),...
+'e_field_townsend_error_upper',double([]),...
+'grid',struct(...
+'dim1',double([]),...
+'dim1_error_index',int32(-999999999),...
+'dim1_error_lower',double([]),...
+'dim1_error_upper',double([]),...
+'dim2',double([]),...
+'dim2_error_index',int32(-999999999),...
+'dim2_error_lower',double([]),...
+'dim2_error_upper',double([]),...
+'volume_element',double([]),...
+'volume_element_error_index',int32(-999999999),...
+'volume_element_error_lower',double([]),...
+'volume_element_error_upper',double([])),...
+'grid_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'lengths',double([]),...
+'lengths_error_index',int32(-999999999),...
+'lengths_error_lower',double([]),...
+'lengths_error_upper',double([]),...
+'open_fraction',double(-9e+40),...
+'open_fraction_error_index',int32(-999999999),...
+'open_fraction_error_lower',double(-9e+40),...
+'open_fraction_error_upper',double(-9e+40),...
+'pressure',double(-9e+40),...
+'pressure_error_index',int32(-999999999),...
+'pressure_error_lower',double(-9e+40),...
+'pressure_error_upper',double(-9e+40),...
+'starting_positions',struct(...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'time',double(-9e+40),...
+'townsend_or_closed_grid_positions',struct(...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'townsend_or_closed_positions',struct(...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])))
+}},...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'global_quantities',struct(...
+'b_field_perpendicular',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'b_field_stray',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'connection_length',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'coulomb_logarithm',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([]))),...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'profiles_2d',{{struct(...
+'e_field_tor',double([]),...
+'e_field_tor_error_index',int32(-999999999),...
+'e_field_tor_error_lower',double([]),...
+'e_field_tor_error_upper',double([]),...
+'grid',struct(...
+'dim1',double([]),...
+'dim1_error_index',int32(-999999999),...
+'dim1_error_lower',double([]),...
+'dim1_error_upper',double([]),...
+'dim2',double([]),...
+'dim2_error_index',int32(-999999999),...
+'dim2_error_lower',double([]),...
+'dim2_error_upper',double([]),...
+'volume_element',double([]),...
+'volume_element_error_index',int32(-999999999),...
+'volume_element_error_lower',double([]),...
+'volume_element_error_upper',double([])),...
+'grid_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'time',double(-9e+40))
+}},...
+'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_polarimeter.m b/matlab/TCV_IMAS/ids_empty/ids_empty_polarimeter.m
index 0e00ea9396f5fb4ab08c58ca95374576f0cb0b78..cf12101a0549e8803ccf3c56a04a0893eba8e698 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_polarimeter.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_polarimeter.m
@@ -1,9 +1,11 @@
function S = ids_empty_polarimeter
% function S = ids_empty_polarimeter
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'ellipticity',struct(...
@@ -76,16 +78,18 @@ struct(...
'wavelength_error_index',int32(-999999999),...
'wavelength_error_lower',double(-9e+40),...
'wavelength_error_upper',double(-9e+40))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -95,10 +99,59 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_pulse_schedule.m b/matlab/TCV_IMAS/ids_empty/ids_empty_pulse_schedule.m
index 0193cf0140d608ae4968efcf56eee7cdc64ab0fa..9ac5a8194fa19303c5c38351a1ddcc14ab19e192 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_pulse_schedule.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_pulse_schedule.m
@@ -1,25 +1,61 @@
function S = ids_empty_pulse_schedule
% function S = ids_empty_pulse_schedule
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
'repository','',...
'version',''),...
'density_control',struct(...
+'ion',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'label','',...
+'n_i_volume_average',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'z_ion',double(-9e+40),...
+'z_ion_error_index',int32(-999999999),...
+'z_ion_error_lower',double(-9e+40),...
+'z_ion_error_upper',double(-9e+40))
+}},...
'mode',struct(...
'data',int32([]),...
'time',double([])),...
@@ -33,6 +69,76 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)),...
+'n_e_line_lcfs',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'n_e_line_of_sight',struct(...
+'first_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'third_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'n_e_profile_average',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'n_e_volume_average',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
'n_h_over_n_d',struct(...
'envelope_type',int32(-999999999),...
'reference',struct(...
@@ -81,14 +187,14 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'fraction',double(-9e+40),...
'fraction_error_index',int32(-999999999),...
'fraction_error_lower',double(-9e+40),...
'fraction_error_upper',double(-9e+40),...
'label','')
-;}})
-;}},...
+}})
+}},...
'zeff',struct(...
'envelope_type',int32(-999999999),...
'reference',struct(...
@@ -98,7 +204,51 @@ struct(...
'data_error_upper',double([]),...
'time',double([])),...
'reference_name','',...
-'reference_type',int32(-999999999))),...
+'reference_type',int32(-999999999)),...
+'zeff_line_of_sight',struct(...
+'first_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'third_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'zeff_method',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name','')),...
'ec',struct(...
'launcher',{{struct(...
'deposition_rho_tor_norm',struct(...
@@ -133,10 +283,6 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)),...
-'power_type',struct(...
-'description','',...
-'index',int32(-999999999),...
-'name',''),...
'steering_angle_pol',struct(...
'envelope_type',int32(-999999999),...
'reference',struct(...
@@ -157,10 +303,20 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)))
-;}},...
+}},...
'mode',struct(...
'data',int32([]),...
-'time',double([]))),...
+'time',double([])),...
+'power',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999))),...
'event',{{struct(...
'acquisition_state',struct(...
'description','',...
@@ -185,7 +341,7 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'flux_control',struct(...
'beta_normal',struct(...
'envelope_type',int32(-999999999),...
@@ -268,14 +424,69 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'mode',struct(...
'data',int32([]),...
-'time',double([]))),...
+'time',double([])),...
+'power',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999))),...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -330,14 +541,34 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'mode',struct(...
'data',int32([]),...
-'time',double([]))),...
+'time',double([])),...
+'power',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999))),...
'nbi',struct(...
'mode',struct(...
'data',int32([]),...
'time',double([])),...
+'power',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
'unit',{{struct(...
'energy',struct(...
'envelope_type',int32(-999999999),...
@@ -361,10 +592,6 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)),...
-'power_type',struct(...
-'description','',...
-'index',int32(-999999999),...
-'name',''),...
'species',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -380,14 +607,56 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'fraction',double(-9e+40),...
'fraction_error_index',int32(-999999999),...
'fraction_error_lower',double(-9e+40),...
'fraction_error_upper',double(-9e+40),...
'label','')
-;}})
-;}}),...
+}})
+}}),...
+'pf_active',struct(...
+'coil',{{struct(...
+'current',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'identifier','',...
+'name','',...
+'resistance_additional',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)))
+}},...
+'mode',struct(...
+'data',int32([]),...
+'time',double([])),...
+'supply',{{struct(...
+'identifier','',...
+'name','',...
+'voltage',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)))
+}}),...
'position_control',struct(...
'active_limiter_point',struct(...
'r',struct(...
@@ -431,7 +700,7 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)))
-;}},...
+}},...
'elongation',struct(...
'envelope_type',int32(-999999999),...
'reference',struct(...
@@ -487,7 +756,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))
-;}},...
+}},...
'geometric_axis',struct(...
'r',struct(...
'envelope_type',int32(-999999999),...
@@ -543,6 +812,46 @@ struct(...
'mode',struct(...
'data',int32([]),...
'time',double([])),...
+'squareness_lower_inner',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'squareness_lower_outer',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'squareness_upper_inner',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'squareness_upper_outer',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
'strike_point',{{struct(...
'r',struct(...
'envelope_type',int32(-999999999),...
@@ -564,7 +873,7 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)))
-;}},...
+}},...
'triangularity',struct(...
'envelope_type',int32(-999999999),...
'reference',struct(...
@@ -575,6 +884,16 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)),...
+'triangularity_inner',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
'triangularity_lower',struct(...
'envelope_type',int32(-999999999),...
'reference',struct(...
@@ -585,6 +904,26 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)),...
+'triangularity_minor',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'triangularity_outer',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
'triangularity_upper',struct(...
'envelope_type',int32(-999999999),...
'reference',struct(...
@@ -616,7 +955,27 @@ struct(...
'time',double([])),...
'reference_name','',...
'reference_type',int32(-999999999)))
-;}}),...
+}},...
+'z_r_max',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999)),...
+'z_r_min',struct(...
+'envelope_type',int32(-999999999),...
+'reference',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'reference_name','',...
+'reference_type',int32(-999999999))),...
'tf',struct(...
'b_field_tor_vacuum_r',struct(...
'envelope_type',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_radiation.m b/matlab/TCV_IMAS/ids_empty/ids_empty_radiation.m
index dd062ea667d0ed13c387c4ef47a344183182a953..a293b9da66ace9056414e2d2b14c8f36accdb201 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_radiation.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_radiation.m
@@ -1,19 +1,23 @@
function S = ids_empty_radiation
% function S = ids_empty_radiation
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -34,15 +38,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -60,11 +64,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -76,12 +81,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -90,15 +103,60 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}},...
+}})
+}})
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -119,7 +177,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}}),...
'ion',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -135,7 +193,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'emissivity',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -147,7 +205,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'neutral_index',int32(-999999999),...
@@ -164,7 +222,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
@@ -179,12 +237,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'neutral',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -200,7 +258,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'emissivity',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -212,7 +270,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'multiple_states_flag',int32(-999999999),...
@@ -229,7 +287,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'neutral_type',struct(...
'description','',...
@@ -240,10 +298,10 @@ struct(...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}})
-;}},...
+}})
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'global_quantities',{{struct(...
'inside_lcfs',struct(...
'power',double(-9e+40),...
@@ -280,7 +338,7 @@ struct(...
'power_neutral_total_error_lower',double(-9e+40),...
'power_neutral_total_error_upper',double(-9e+40)),...
'time',double(-9e+40))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -355,7 +413,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'emissivity',double([]),...
'emissivity_error_index',int32(-999999999),...
'emissivity_error_lower',double([]),...
@@ -391,12 +449,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'neutral',{{struct(...
'element',{{struct(...
'a',double(-9e+40),...
@@ -412,7 +470,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'emissivity',double([]),...
'emissivity_error_index',int32(-999999999),...
'emissivity_error_lower',double([]),...
@@ -444,8 +502,8 @@ struct(...
'vibrational_level_error_lower',double(-9e+40),...
'vibrational_level_error_upper',double(-9e+40),...
'vibrational_mode','')
-;}})
-;}},...
+}})
+}},...
'power_inside_ion_total',double([]),...
'power_inside_ion_total_error_index',int32(-999999999),...
'power_inside_ion_total_error_lower',double([]),...
@@ -455,8 +513,8 @@ struct(...
'power_inside_neutral_total_error_lower',double([]),...
'power_inside_neutral_total_error_upper',double([]),...
'time',double(-9e+40))
-;}})
-;}},...
+}})
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_real_time_data.m b/matlab/TCV_IMAS/ids_empty/ids_empty_real_time_data.m
new file mode 100644
index 0000000000000000000000000000000000000000..cb9dc2ae484d0379721d15637648129cefa1634e
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_real_time_data.m
@@ -0,0 +1,98 @@
+function S = ids_empty_real_time_data
+% function S = ids_empty_real_time_data
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'time',double([]),...
+'topic',{{struct(...
+'name','',...
+'signal',{{struct(...
+'allocated_position',int32(-999999999),...
+'definition','',...
+'name','',...
+'quality',struct(...
+'data',int32([]),...
+'time',double([])),...
+'value',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])))
+}})
+}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_reflectometer_fluctuation.m b/matlab/TCV_IMAS/ids_empty/ids_empty_reflectometer_fluctuation.m
new file mode 100644
index 0000000000000000000000000000000000000000..47edff4dd25a7daad920ad8ce2c46fea513e3626
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_reflectometer_fluctuation.m
@@ -0,0 +1,462 @@
+function S = ids_empty_reflectometer_fluctuation
+% function S = ids_empty_reflectometer_fluctuation
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'channel',{{struct(...
+'amplitude',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'antenna_detection_static',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40)),...
+'antenna_emission_static',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40)),...
+'antennas_orientation',{{struct(...
+'antenna_detection',struct(...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'antenna_emission',struct(...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'line_of_sight_detection',struct(...
+'first_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'line_of_sight_emission',struct(...
+'first_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'time',double(-9e+40))
+}},...
+'doppler',struct(...
+'e_field_radial',double([]),...
+'e_field_radial_error_index',int32(-999999999),...
+'e_field_radial_error_lower',double([]),...
+'e_field_radial_error_upper',double([]),...
+'position',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'psi',double([]),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double([]),...
+'psi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'rho_pol_norm',double([]),...
+'rho_pol_norm_error_index',int32(-999999999),...
+'rho_pol_norm_error_lower',double([]),...
+'rho_pol_norm_error_upper',double([]),...
+'rho_tor_norm',double([]),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double([]),...
+'rho_tor_norm_error_upper',double([]),...
+'theta',double([]),...
+'theta_error_index',int32(-999999999),...
+'theta_error_lower',double([]),...
+'theta_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'radial_width',double(-9e+40),...
+'radial_width_error_index',int32(-999999999),...
+'radial_width_error_lower',double(-9e+40),...
+'radial_width_error_upper',double(-9e+40),...
+'shift',double([]),...
+'shift_error_index',int32(-999999999),...
+'shift_error_lower',double([]),...
+'shift_error_upper',double([]),...
+'time',double([]),...
+'time_width',double(-9e+40),...
+'time_width_error_index',int32(-999999999),...
+'time_width_error_lower',double(-9e+40),...
+'time_width_error_upper',double(-9e+40),...
+'velocity_pol',double([]),...
+'velocity_pol_error_index',int32(-999999999),...
+'velocity_pol_error_lower',double([]),...
+'velocity_pol_error_upper',double([]),...
+'wavenumber',double([]),...
+'wavenumber_error_index',int32(-999999999),...
+'wavenumber_error_lower',double([]),...
+'wavenumber_error_upper',double([])),...
+'fluctuations_level',struct(...
+'dn_e_over_n_e',double([]),...
+'dn_e_over_n_e_error_index',int32(-999999999),...
+'dn_e_over_n_e_error_lower',double([]),...
+'dn_e_over_n_e_error_upper',double([]),...
+'position',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'psi',double([]),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double([]),...
+'psi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'rho_pol_norm',double([]),...
+'rho_pol_norm_error_index',int32(-999999999),...
+'rho_pol_norm_error_lower',double([]),...
+'rho_pol_norm_error_upper',double([]),...
+'rho_tor_norm',double([]),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double([]),...
+'rho_tor_norm_error_upper',double([]),...
+'theta',double([]),...
+'theta_error_index',int32(-999999999),...
+'theta_error_lower',double([]),...
+'theta_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'radial_width',double(-9e+40),...
+'radial_width_error_index',int32(-999999999),...
+'radial_width_error_lower',double(-9e+40),...
+'radial_width_error_upper',double(-9e+40),...
+'time',double([]),...
+'time_width',double(-9e+40),...
+'time_width_error_index',int32(-999999999),...
+'time_width_error_lower',double(-9e+40),...
+'time_width_error_upper',double(-9e+40)),...
+'fluctuations_spectrum',struct(...
+'frequencies_fourier',double([]),...
+'frequencies_fourier_error_index',int32(-999999999),...
+'frequencies_fourier_error_lower',double([]),...
+'frequencies_fourier_error_upper',double([]),...
+'power_log',double([]),...
+'power_log_error_index',int32(-999999999),...
+'power_log_error_lower',double([]),...
+'power_log_error_upper',double([]),...
+'time',double([]),...
+'time_width',double(-9e+40),...
+'time_width_error_index',int32(-999999999),...
+'time_width_error_lower',double(-9e+40),...
+'time_width_error_upper',double(-9e+40)),...
+'frequencies',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'identifier','',...
+'mode','',...
+'name','',...
+'phase',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'raw_signal',struct(...
+'i_component',double([]),...
+'i_component_error_index',int32(-999999999),...
+'i_component_error_lower',double([]),...
+'i_component_error_upper',double([]),...
+'q_component',double([]),...
+'q_component_error_index',int32(-999999999),...
+'q_component_error_lower',double([]),...
+'q_component_error_upper',double([]),...
+'time',double([])),...
+'sweep_time',double(-9e+40),...
+'sweep_time_error_index',int32(-999999999),...
+'sweep_time_error_lower',double(-9e+40),...
+'sweep_time_error_upper',double(-9e+40))
+}},...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'psi_normalization',struct(...
+'psi_boundary',double([]),...
+'psi_boundary_error_index',int32(-999999999),...
+'psi_boundary_error_lower',double([]),...
+'psi_boundary_error_upper',double([]),...
+'psi_magnetic_axis',double([]),...
+'psi_magnetic_axis_error_index',int32(-999999999),...
+'psi_magnetic_axis_error_lower',double([]),...
+'psi_magnetic_axis_error_upper',double([]),...
+'time',double([])),...
+'time',double([]),...
+'type','');
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_reflectometer_profile.m b/matlab/TCV_IMAS/ids_empty/ids_empty_reflectometer_profile.m
index f8920292c4199b3199c833e68314a89c1cc43708..eab0b5219d680dd2a5eb59370a3c27c6588e1a9d 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_reflectometer_profile.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_reflectometer_profile.m
@@ -1,11 +1,181 @@
function S = ids_empty_reflectometer_profile
% function S = ids_empty_reflectometer_profile
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
+'amplitude',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'antenna_detection',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'antenna_emission',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'cut_off_frequency',double([]),...
+'cut_off_frequency_error_index',int32(-999999999),...
+'cut_off_frequency_error_lower',double([]),...
+'cut_off_frequency_error_upper',double([]),...
'frequencies',double([]),...
'frequencies_error_index',int32(-999999999),...
'frequencies_error_lower',double([]),...
@@ -92,6 +262,10 @@ struct(...
'r_error_index',int32(-999999999),...
'r_error_lower',double([]),...
'r_error_upper',double([]),...
+'rho_pol_norm',double([]),...
+'rho_pol_norm_error_index',int32(-999999999),...
+'rho_pol_norm_error_lower',double([]),...
+'rho_pol_norm_error_upper',double([]),...
'rho_tor_norm',double([]),...
'rho_tor_norm_error_index',int32(-999999999),...
'rho_tor_norm_error_lower',double([]),...
@@ -108,16 +282,18 @@ struct(...
'sweep_time_error_index',int32(-999999999),...
'sweep_time_error_lower',double(-9e+40),...
'sweep_time_error_upper',double(-9e+40))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -127,12 +303,96 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'n_e',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'position',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'psi',double([]),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double([]),...
+'psi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'rho_pol_norm',double([]),...
+'rho_pol_norm_error_index',int32(-999999999),...
+'rho_pol_norm_error_lower',double([]),...
+'rho_pol_norm_error_upper',double([]),...
+'rho_tor_norm',double([]),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double([]),...
+'rho_tor_norm_error_upper',double([]),...
+'theta',double([]),...
+'theta_error_index',int32(-999999999),...
+'theta_error_lower',double([]),...
+'theta_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
'psi_normalization',struct(...
'psi_boundary',double([]),...
'psi_boundary_error_index',int32(-999999999),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_refractometer.m b/matlab/TCV_IMAS/ids_empty/ids_empty_refractometer.m
index 5ca0b6eb8d8f89f603bb5693cfb1b994fa2661c0..d5f175bc6d78a27f489c832376c490461254e9a8 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_refractometer.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_refractometer.m
@@ -1,15 +1,48 @@
function S = ids_empty_refractometer
% function S = ids_empty_refractometer
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
-'frequencies',double([]),...
-'frequencies_error_index',int32(-999999999),...
-'frequencies_error_lower',double([]),...
-'frequencies_error_upper',double([]),...
+'bandwidth',{{struct(...
+'frequency_main',double(-9e+40),...
+'frequency_main_error_index',int32(-999999999),...
+'frequency_main_error_lower',double(-9e+40),...
+'frequency_main_error_upper',double(-9e+40),...
+'i_component',double([]),...
+'i_component_error_index',int32(-999999999),...
+'i_component_error_lower',double([]),...
+'i_component_error_upper',double([]),...
+'n_e_line',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'phase',double([]),...
+'phase_error_index',int32(-999999999),...
+'phase_error_lower',double([]),...
+'phase_error_upper',double([]),...
+'phase_quadrature',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'q_component',double([]),...
+'q_component_error_index',int32(-999999999),...
+'q_component_error_lower',double([]),...
+'q_component_error_upper',double([]),...
+'time',double([]),...
+'time_detector',double([]),...
+'time_detector_error_index',int32(-999999999),...
+'time_detector_error_lower',double([]),...
+'time_detector_error_upper',double([]))
+}},...
'identifier','',...
'line_of_sight',struct(...
'first_point',struct(...
@@ -45,33 +78,28 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])),...
-'name','',...
-'phase',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'phase_quadrature',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'sweep_time',double(-9e+40),...
-'sweep_time_error_index',int32(-999999999),...
-'sweep_time_error_lower',double(-9e+40),...
-'sweep_time_error_upper',double(-9e+40))
-;}},...
+'n_e_profile_approximation',struct(...
+'formula',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'parameters',double([]),...
+'parameters_error_index',int32(-999999999),...
+'parameters_error_lower',double([]),...
+'parameters_error_upper',double([])),...
+'name','')
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -81,11 +109,60 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]),...
'type','');
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_runaway_electrons.m b/matlab/TCV_IMAS/ids_empty/ids_empty_runaway_electrons.m
new file mode 100644
index 0000000000000000000000000000000000000000..bd4f5702c1f99137b3874ef1656d01ef811508fe
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_runaway_electrons.m
@@ -0,0 +1,586 @@
+function S = ids_empty_runaway_electrons
+% function S = ids_empty_runaway_electrons
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'distribution',struct(...
+'ggd',{{struct(...
+'expansion',{{struct(...
+'grid_subset',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}})
+}},...
+'expansion_fd3v',{{struct(...
+'grid_subset',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}})
+}},...
+'temperature',double([]),...
+'temperature_error_index',int32(-999999999),...
+'temperature_error_lower',double([]),...
+'temperature_error_upper',double([]),...
+'time',double(-9e+40))
+}},...
+'gyro_type',int32(-999999999),...
+'markers',{{struct(...
+'coordinate_identifier',{{struct(...
+'description','',...
+'index',int32(-999999999),...
+'name','')
+}},...
+'orbit_integrals',struct(...
+'bounce_harmonics',int32([]),...
+'expressions',{{}},...
+'m_pol',int32([]),...
+'n_tor',int32([]),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([])),...
+'orbit_integrals_instant',struct(...
+'expressions',{{}},...
+'time_orbit',double([]),...
+'time_orbit_error_index',int32(-999999999),...
+'time_orbit_error_lower',double([]),...
+'time_orbit_error_upper',double([]),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([])),...
+'positions',double([]),...
+'positions_error_index',int32(-999999999),...
+'positions_error_lower',double([]),...
+'positions_error_upper',double([]),...
+'time',double(-9e+40),...
+'toroidal_mode',int32(-999999999),...
+'weights',double([]),...
+'weights_error_index',int32(-999999999),...
+'weights_error_lower',double([]),...
+'weights_error_upper',double([]))
+}}),...
+'e_field_critical_definition',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'ggd_fluid',{{struct(...
+'current_density',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ddensity_dt_compton',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ddensity_dt_dreicer',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ddensity_dt_hot_tail',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ddensity_dt_total',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ddensity_dt_tritium',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'density',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'e_field_critical',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'e_field_dreicer',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'energy_density_kinetic',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'momentum_critical_avalanche',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'momentum_critical_hot_tail',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'pitch_angle',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'time',double(-9e+40))
+}},...
+'global_quantities',struct(...
+'current_tor',double([]),...
+'current_tor_error_index',int32(-999999999),...
+'current_tor_error_lower',double([]),...
+'current_tor_error_upper',double([]),...
+'energy_kinetic',double([]),...
+'energy_kinetic_error_index',int32(-999999999),...
+'energy_kinetic_error_lower',double([]),...
+'energy_kinetic_error_upper',double([]),...
+'volume_average',struct(...
+'current_density',double([]),...
+'current_density_error_index',int32(-999999999),...
+'current_density_error_lower',double([]),...
+'current_density_error_upper',double([]),...
+'ddensity_dt_compton',double([]),...
+'ddensity_dt_compton_error_index',int32(-999999999),...
+'ddensity_dt_compton_error_lower',double([]),...
+'ddensity_dt_compton_error_upper',double([]),...
+'ddensity_dt_dreicer',double([]),...
+'ddensity_dt_dreicer_error_index',int32(-999999999),...
+'ddensity_dt_dreicer_error_lower',double([]),...
+'ddensity_dt_dreicer_error_upper',double([]),...
+'ddensity_dt_hot_tail',double([]),...
+'ddensity_dt_hot_tail_error_index',int32(-999999999),...
+'ddensity_dt_hot_tail_error_lower',double([]),...
+'ddensity_dt_hot_tail_error_upper',double([]),...
+'ddensity_dt_total',double([]),...
+'ddensity_dt_total_error_index',int32(-999999999),...
+'ddensity_dt_total_error_lower',double([]),...
+'ddensity_dt_total_error_upper',double([]),...
+'ddensity_dt_tritium',double([]),...
+'ddensity_dt_tritium_error_index',int32(-999999999),...
+'ddensity_dt_tritium_error_lower',double([]),...
+'ddensity_dt_tritium_error_upper',double([]),...
+'density',double([]),...
+'density_error_index',int32(-999999999),...
+'density_error_lower',double([]),...
+'density_error_upper',double([]),...
+'e_field_critical',double([]),...
+'e_field_critical_error_index',int32(-999999999),...
+'e_field_critical_error_lower',double([]),...
+'e_field_critical_error_upper',double([]),...
+'e_field_dreicer',double([]),...
+'e_field_dreicer_error_index',int32(-999999999),...
+'e_field_dreicer_error_lower',double([]),...
+'e_field_dreicer_error_upper',double([]),...
+'energy_density_kinetic',double([]),...
+'energy_density_kinetic_error_index',int32(-999999999),...
+'energy_density_kinetic_error_lower',double([]),...
+'energy_density_kinetic_error_upper',double([]),...
+'momentum_critical_avalanche',double([]),...
+'momentum_critical_avalanche_error_index',int32(-999999999),...
+'momentum_critical_avalanche_error_lower',double([]),...
+'momentum_critical_avalanche_error_upper',double([]),...
+'momentum_critical_hot_tail',double([]),...
+'momentum_critical_hot_tail_error_index',int32(-999999999),...
+'momentum_critical_hot_tail_error_lower',double([]),...
+'momentum_critical_hot_tail_error_upper',double([]),...
+'pitch_angle',double([]),...
+'pitch_angle_error_index',int32(-999999999),...
+'pitch_angle_error_lower',double([]),...
+'pitch_angle_error_upper',double([]))),...
+'grid_ggd',{{struct(...
+'grid_subset',{{struct(...
+'base',{{struct(...
+'jacobian',double([]),...
+'jacobian_error_index',int32(-999999999),...
+'jacobian_error_lower',double([]),...
+'jacobian_error_upper',double([]),...
+'tensor_contravariant',double([]),...
+'tensor_contravariant_error_index',int32(-999999999),...
+'tensor_contravariant_error_lower',double([]),...
+'tensor_contravariant_error_upper',double([]),...
+'tensor_covariant',double([]),...
+'tensor_covariant_error_index',int32(-999999999),...
+'tensor_covariant_error_lower',double([]),...
+'tensor_covariant_error_upper',double([]))
+}},...
+'dimension',int32(-999999999),...
+'element',{{struct(...
+'object',{{struct(...
+'dimension',int32(-999999999),...
+'index',int32(-999999999),...
+'space',int32(-999999999))
+}})
+}},...
+'identifier',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'metric',struct(...
+'jacobian',double([]),...
+'jacobian_error_index',int32(-999999999),...
+'jacobian_error_lower',double([]),...
+'jacobian_error_upper',double([]),...
+'tensor_contravariant',double([]),...
+'tensor_contravariant_error_index',int32(-999999999),...
+'tensor_contravariant_error_lower',double([]),...
+'tensor_contravariant_error_upper',double([]),...
+'tensor_covariant',double([]),...
+'tensor_covariant_error_index',int32(-999999999),...
+'tensor_covariant_error_lower',double([]),...
+'tensor_covariant_error_upper',double([])))
+}},...
+'identifier',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'path','',...
+'space',{{struct(...
+'coordinates_type',int32([]),...
+'geometry_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'identifier',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'object',{{struct(...
+'boundary',{{struct(...
+'index',int32(-999999999),...
+'neighbours',int32([]))
+}},...
+'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
+'geometry_error_index',int32(-999999999),...
+'geometry_error_lower',double([]),...
+'geometry_error_upper',double([]),...
+'measure',double(-9e+40),...
+'measure_error_index',int32(-999999999),...
+'measure_error_lower',double(-9e+40),...
+'measure_error_upper',double(-9e+40),...
+'nodes',int32([]))
+}})
+}})
+}},...
+'time',double(-9e+40))
+}},...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'momentum_critical_avalanche_definition',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'momentum_critical_hot_tail_definition',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'profiles_1d',{{struct(...
+'current_density',double([]),...
+'current_density_error_index',int32(-999999999),...
+'current_density_error_lower',double([]),...
+'current_density_error_upper',double([]),...
+'ddensity_dt_compton',double([]),...
+'ddensity_dt_compton_error_index',int32(-999999999),...
+'ddensity_dt_compton_error_lower',double([]),...
+'ddensity_dt_compton_error_upper',double([]),...
+'ddensity_dt_dreicer',double([]),...
+'ddensity_dt_dreicer_error_index',int32(-999999999),...
+'ddensity_dt_dreicer_error_lower',double([]),...
+'ddensity_dt_dreicer_error_upper',double([]),...
+'ddensity_dt_hot_tail',double([]),...
+'ddensity_dt_hot_tail_error_index',int32(-999999999),...
+'ddensity_dt_hot_tail_error_lower',double([]),...
+'ddensity_dt_hot_tail_error_upper',double([]),...
+'ddensity_dt_total',double([]),...
+'ddensity_dt_total_error_index',int32(-999999999),...
+'ddensity_dt_total_error_lower',double([]),...
+'ddensity_dt_total_error_upper',double([]),...
+'ddensity_dt_tritium',double([]),...
+'ddensity_dt_tritium_error_index',int32(-999999999),...
+'ddensity_dt_tritium_error_lower',double([]),...
+'ddensity_dt_tritium_error_upper',double([]),...
+'density',double([]),...
+'density_error_index',int32(-999999999),...
+'density_error_lower',double([]),...
+'density_error_upper',double([]),...
+'e_field_critical',double([]),...
+'e_field_critical_error_index',int32(-999999999),...
+'e_field_critical_error_lower',double([]),...
+'e_field_critical_error_upper',double([]),...
+'e_field_dreicer',double([]),...
+'e_field_dreicer_error_index',int32(-999999999),...
+'e_field_dreicer_error_lower',double([]),...
+'e_field_dreicer_error_upper',double([]),...
+'energy_density_kinetic',double([]),...
+'energy_density_kinetic_error_index',int32(-999999999),...
+'energy_density_kinetic_error_lower',double([]),...
+'energy_density_kinetic_error_upper',double([]),...
+'grid',struct(...
+'area',double([]),...
+'area_error_index',int32(-999999999),...
+'area_error_lower',double([]),...
+'area_error_upper',double([]),...
+'psi',double([]),...
+'psi_boundary',double(-9e+40),...
+'psi_boundary_error_index',int32(-999999999),...
+'psi_boundary_error_lower',double(-9e+40),...
+'psi_boundary_error_upper',double(-9e+40),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double([]),...
+'psi_error_upper',double([]),...
+'psi_magnetic_axis',double(-9e+40),...
+'psi_magnetic_axis_error_index',int32(-999999999),...
+'psi_magnetic_axis_error_lower',double(-9e+40),...
+'psi_magnetic_axis_error_upper',double(-9e+40),...
+'rho_pol_norm',double([]),...
+'rho_pol_norm_error_index',int32(-999999999),...
+'rho_pol_norm_error_lower',double([]),...
+'rho_pol_norm_error_upper',double([]),...
+'rho_tor',double([]),...
+'rho_tor_error_index',int32(-999999999),...
+'rho_tor_error_lower',double([]),...
+'rho_tor_error_upper',double([]),...
+'rho_tor_norm',double([]),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double([]),...
+'rho_tor_norm_error_upper',double([]),...
+'surface',double([]),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double([]),...
+'surface_error_upper',double([]),...
+'volume',double([]),...
+'volume_error_index',int32(-999999999),...
+'volume_error_lower',double([]),...
+'volume_error_upper',double([])),...
+'momentum_critical_avalanche',double([]),...
+'momentum_critical_avalanche_error_index',int32(-999999999),...
+'momentum_critical_avalanche_error_lower',double([]),...
+'momentum_critical_avalanche_error_upper',double([]),...
+'momentum_critical_hot_tail',double([]),...
+'momentum_critical_hot_tail_error_index',int32(-999999999),...
+'momentum_critical_hot_tail_error_lower',double([]),...
+'momentum_critical_hot_tail_error_upper',double([]),...
+'pitch_angle',double([]),...
+'pitch_angle_error_index',int32(-999999999),...
+'pitch_angle_error_lower',double([]),...
+'pitch_angle_error_upper',double([]),...
+'time',double(-9e+40),...
+'transport_perpendicular',struct(...
+'d',double([]),...
+'d_error_index',int32(-999999999),...
+'d_error_lower',double([]),...
+'d_error_upper',double([]),...
+'flux',double([]),...
+'flux_error_index',int32(-999999999),...
+'flux_error_lower',double([]),...
+'flux_error_upper',double([]),...
+'v',double([]),...
+'v_error_index',int32(-999999999),...
+'v_error_lower',double([]),...
+'v_error_upper',double([])))
+}},...
+'time',double([]),...
+'vacuum_toroidal_field',struct(...
+'b0',double([]),...
+'b0_error_index',int32(-999999999),...
+'b0_error_lower',double([]),...
+'b0_error_upper',double([]),...
+'r0',double(-9e+40),...
+'r0_error_index',int32(-999999999),...
+'r0_error_lower',double(-9e+40),...
+'r0_error_upper',double(-9e+40)));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_sawteeth.m b/matlab/TCV_IMAS/ids_empty/ids_empty_sawteeth.m
index da42ec8a25c504a4912f3a40b32985dc055e1818..c4ced31d37f122659aae9068257e241cf4715ceb 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_sawteeth.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_sawteeth.m
@@ -1,19 +1,23 @@
function S = ids_empty_sawteeth
% function S = ids_empty_sawteeth
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -50,6 +54,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -207,7 +256,7 @@ struct(...
'zeff_error_index',int32(-999999999),...
'zeff_error_lower',double([]),...
'zeff_error_upper',double([]))
-;}},...
+}},...
'time',double([]),...
'vacuum_toroidal_field',struct(...
'b0',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_sdn.m b/matlab/TCV_IMAS/ids_empty/ids_empty_sdn.m
deleted file mode 100644
index 2a4b9700e0c4199eb6aeae01a55e63b8b4d6d697..0000000000000000000000000000000000000000
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_sdn.m
+++ /dev/null
@@ -1,49 +0,0 @@
-function S = ids_empty_sdn
-% function S = ids_empty_sdn
-%
-% File written automatically using struct2m.m
-
-S = ...
-struct(...
-'code',struct(...
-'commit','',...
-'library',{{struct(...
-'commit','',...
-'name','',...
-'parameters','',...
-'repository','',...
-'version','')
-;}},...
-'name','',...
-'output_flag',int32([]),...
-'parameters','',...
-'repository','',...
-'version',''),...
-'ids_properties',struct(...
-'comment','',...
-'creation_date','',...
-'homogeneous_time',int32(-999999999),...
-'provider','',...
-'source','',...
-'version_put',struct(...
-'access_layer','',...
-'access_layer_language','',...
-'data_dictionary','')),...
-'time',double([]),...
-'topic',{{struct(...
-'name','',...
-'signal',{{struct(...
-'allocated_position',int32(-999999999),...
-'definition','',...
-'name','',...
-'quality',struct(...
-'data',int32([]),...
-'time',double([])),...
-'value',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])))
-;}})
-;}});
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_soft_x_rays.m b/matlab/TCV_IMAS/ids_empty/ids_empty_soft_x_rays.m
index e56a4d6cfe1c33a15df7c95cb07215da7a91ceaf..3a0783cc4f846a72cba102b6b697cde4135f5c2f 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_soft_x_rays.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_soft_x_rays.m
@@ -1,9 +1,11 @@
function S = ids_empty_soft_x_rays
% function S = ids_empty_soft_x_rays
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'aperture',{{struct(...
@@ -85,7 +87,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'brightness',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -188,7 +190,7 @@ struct(...
'upper_bound_error_index',int32(-999999999),...
'upper_bound_error_lower',double(-9e+40),...
'upper_bound_error_upper',double(-9e+40))
-;}},...
+}},...
'etendue',double(-9e+40),...
'etendue_error_index',int32(-999999999),...
'etendue_error_lower',double(-9e+40),...
@@ -197,6 +199,126 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'filter_window',{{struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'geometry_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'identifier','',...
+'material',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'photon_absorption',double([]),...
+'photon_absorption_error_index',int32(-999999999),...
+'photon_absorption_error_lower',double([]),...
+'photon_absorption_error_upper',double([]),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40),...
+'wavelength_lower',double(-9e+40),...
+'wavelength_lower_error_index',int32(-999999999),...
+'wavelength_lower_error_lower',double(-9e+40),...
+'wavelength_lower_error_upper',double(-9e+40),...
+'wavelength_upper',double(-9e+40),...
+'wavelength_upper_error_index',int32(-999999999),...
+'wavelength_upper_error_lower',double(-9e+40),...
+'wavelength_upper_error_upper',double(-9e+40),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([]),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))
+}},...
'identifier','',...
'line_of_sight',struct(...
'first_point',struct(...
@@ -236,16 +358,18 @@ struct(...
'validity_timed',struct(...
'data',int32([]),...
'time',double([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -255,10 +379,59 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_mass.m b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_mass.m
index 3b01c69b849323fcae6a88031f90fda73b0adeba..3aa0d5f222a01e85e4351beff0915efc2c3feec1 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_mass.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_mass.m
@@ -1,23 +1,44 @@
function S = ids_empty_spectrometer_mass
% function S = ids_empty_spectrometer_mass
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
-'a',double([]),...
+'channel',{{struct(...
+'a',double(-9e+40),...
'a_error_index',int32(-999999999),...
-'a_error_lower',double([]),...
-'a_error_upper',double([]),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'current',double([]),...
+'current_error_index',int32(-999999999),...
+'current_error_lower',double([]),...
+'current_error_upper',double([]),...
+'photomultiplier_voltage',double([]),...
+'photomultiplier_voltage_error_index',int32(-999999999),...
+'photomultiplier_voltage_error_lower',double([]),...
+'photomultiplier_voltage_error_upper',double([]),...
+'pressure_partial',double([]),...
+'pressure_partial_error_index',int32(-999999999),...
+'pressure_partial_error_lower',double([]),...
+'pressure_partial_error_upper',double([]),...
+'time',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([]))
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -28,19 +49,71 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'name','',...
-'pressures_partial',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([]),...
-'validity',int32(-999999999),...
-'validity_timed',int32([])),...
+'residual_spectrum',{{struct(...
+'a',double([]),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double([]),...
+'a_error_upper',double([]),...
+'current',double([]),...
+'current_error_index',int32(-999999999),...
+'current_error_lower',double([]),...
+'current_error_upper',double([]),...
+'time',double(-9e+40))
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_uv.m b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_uv.m
index b5efbc4e7cba917b123c54b5bd52fcdd885f1da1..da1fc1341767ab41338dcc552b4c081380bd973a 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_uv.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_uv.m
@@ -1,9 +1,11 @@
function S = ids_empty_spectrometer_uv
% function S = ids_empty_spectrometer_uv
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'aperture',{{struct(...
@@ -85,7 +87,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'detector',struct(...
'centre',struct(...
'phi',double(-9e+40),...
@@ -382,7 +384,7 @@ struct(...
'wavelength_central_error_index',int32(-999999999),...
'wavelength_central_error_lower',double(-9e+40),...
'wavelength_central_error_upper',double(-9e+40))
-;}},...
+}},...
'radiance_calibration',double([]),...
'radiance_calibration_date','',...
'radiance_calibration_error_index',int32(-999999999),...
@@ -402,7 +404,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'validity',int32(-999999999),...
'validity_timed',struct(...
'data',int32([]),...
@@ -421,16 +423,18 @@ struct(...
'wavelengths_error_index',int32(-999999999),...
'wavelengths_error_lower',double([]),...
'wavelengths_error_upper',double([]))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -448,10 +452,59 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_visible.m b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_visible.m
index 5fc6ffaf9b16b3c247306ef59f57a6f6abf3cb0b..cb8a2da0817dc8cfbbd4bd42587bf93fa24af28f 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_visible.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_visible.m
@@ -1,9 +1,11 @@
function S = ids_empty_spectrometer_visible
% function S = ids_empty_spectrometer_visible
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'active_spatial_resolution',{{struct(...
@@ -34,7 +36,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'aperture',{{struct(...
'centre',struct(...
'phi',double(-9e+40),...
@@ -114,7 +116,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)))
-;}},...
+}},...
'detector',struct(...
'centre',struct(...
'phi',double(-9e+40),...
@@ -226,6 +228,99 @@ struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'fibre_bundle',struct(...
+'fibre_positions',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'fibre_radius',double(-9e+40),...
+'fibre_radius_error_index',int32(-999999999),...
+'fibre_radius_error_lower',double(-9e+40),...
+'fibre_radius_error_upper',double(-9e+40),...
+'geometry',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))),...
'fibre_image',struct(...
'circular',struct(...
'ellipticity',double(-9e+40),...
@@ -251,76 +346,106 @@ struct(...
'z_error_lower',double([]),...
'z_error_upper',double([]))),...
'filter_spectrometer',struct(...
-'calibrated_line_integrals',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'calibrated_lines',double([]),...
-'calibrated_lines_error_index',int32(-999999999),...
-'calibrated_lines_error_lower',double([]),...
-'calibrated_lines_error_upper',double([]),...
'exposure_time',double(-9e+40),...
'exposure_time_error_index',int32(-999999999),...
'exposure_time_error_lower',double(-9e+40),...
'exposure_time_error_upper',double(-9e+40),...
-'line_intensities',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'line_labels',{{}},...
-'line_power_radiances',struct(...
+'filter',struct(...
+'wavelength_central',double(-9e+40),...
+'wavelength_central_error_index',int32(-999999999),...
+'wavelength_central_error_lower',double(-9e+40),...
+'wavelength_central_error_upper',double(-9e+40),...
+'wavelength_width',double(-9e+40),...
+'wavelength_width_error_index',int32(-999999999),...
+'wavelength_width_error_lower',double(-9e+40),...
+'wavelength_width_error_upper',double(-9e+40)),...
+'output_voltage',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])),...
-'line_radiances',struct(...
+'photoelectric_voltage',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])),...
-'line_radiances_adjusted',struct(...
+'photon_count',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])),...
-'output_voltage',struct(...
+'processed_line',{{struct(...
+'label','',...
+'wavelength_central',double(-9e+40),...
+'wavelength_central_error_index',int32(-999999999),...
+'wavelength_central_error_lower',double(-9e+40),...
+'wavelength_central_error_upper',double(-9e+40))
+}},...
+'radiance_calibration',double([]),...
+'radiance_calibration_date','',...
+'radiance_calibration_error_index',int32(-999999999),...
+'radiance_calibration_error_lower',double([]),...
+'radiance_calibration_error_upper',double([]),...
+'sensitivity',double([]),...
+'sensitivity_error_index',int32(-999999999),...
+'sensitivity_error_lower',double([]),...
+'sensitivity_error_upper',double([]),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([])),...
+'geometry_matrix',struct(...
+'emission_grid',struct(...
+'dim1',double([]),...
+'dim1_error_index',int32(-999999999),...
+'dim1_error_lower',double([]),...
+'dim1_error_upper',double([]),...
+'dim2',double([]),...
+'dim2_error_index',int32(-999999999),...
+'dim2_error_lower',double([]),...
+'dim2_error_upper',double([]),...
+'dim3',double([]),...
+'dim3_error_index',int32(-999999999),...
+'dim3_error_lower',double([]),...
+'dim3_error_upper',double([]),...
+'grid_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name','')),...
+'interpolated',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
-'time',double([])),...
-'photoelectric_voltage',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'voxel_map',int32([]),...
+'voxels_n',int32(-999999999),...
+'with_reflections',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
-'time',double([])),...
-'photon_count',struct(...
+'voxel_indices',int32([])),...
+'without_reflections',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
-'time',double([])),...
-'processed_lines',double([]),...
-'processed_lines_error_index',int32(-999999999),...
-'processed_lines_error_lower',double([]),...
-'processed_lines_error_upper',double([]),...
-'radiance_calibration',double(-9e+40),...
-'radiance_calibration_date','',...
-'radiance_calibration_error_index',int32(-999999999),...
-'radiance_calibration_error_lower',double(-9e+40),...
-'radiance_calibration_error_upper',double(-9e+40),...
-'raw_lines',double([]),...
-'raw_lines_error_index',int32(-999999999),...
-'raw_lines_error_lower',double([]),...
-'raw_lines_error_upper',double([])),...
+'voxel_indices',int32([]))),...
'grating_spectrometer',struct(...
'exposure_time',double(-9e+40),...
'exposure_time_error_index',int32(-999999999),...
@@ -330,6 +455,10 @@ struct(...
'grating_error_index',int32(-999999999),...
'grating_error_lower',double(-9e+40),...
'grating_error_upper',double(-9e+40),...
+'instrument_function',double([]),...
+'instrument_function_error_index',int32(-999999999),...
+'instrument_function_error_lower',double([]),...
+'instrument_function_error_upper',double([]),...
'intensity_spectrum',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -354,7 +483,7 @@ struct(...
'wavelength_central_error_index',int32(-999999999),...
'wavelength_central_error_lower',double(-9e+40),...
'wavelength_central_error_upper',double(-9e+40))
-;}},...
+}},...
'radiance_calibration',double([]),...
'radiance_calibration_date','',...
'radiance_calibration_error_index',int32(-999999999),...
@@ -412,7 +541,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'hot_neutrals_fraction',double([]),...
'hot_neutrals_fraction_error_index',int32(-999999999),...
'hot_neutrals_fraction_error_lower',double([]),...
@@ -423,7 +552,7 @@ struct(...
'hot_neutrals_temperature_error_upper',double([]),...
'label','',...
'time',double([]))
-;}},...
+}},...
'method',struct(...
'description','',...
'index',int32(-999999999),...
@@ -482,6 +611,146 @@ struct(...
'z_error_upper',double(-9e+40))),...
'name','',...
'object_observed','',...
+'optical_element',{{struct(...
+'back_surface',struct(...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40)),...
+'front_surface',struct(...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40)),...
+'geometry',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'material_properties',struct(...
+'extinction_coefficient',double([]),...
+'extinction_coefficient_error_index',int32(-999999999),...
+'extinction_coefficient_error_lower',double([]),...
+'extinction_coefficient_error_upper',double([]),...
+'refractive_index',double([]),...
+'refractive_index_error_index',int32(-999999999),...
+'refractive_index_error_lower',double([]),...
+'refractive_index_error_upper',double([]),...
+'roughness',double([]),...
+'roughness_error_index',int32(-999999999),...
+'roughness_error_lower',double([]),...
+'roughness_error_upper',double([]),...
+'transmission_coefficient',double([]),...
+'transmission_coefficient_error_index',int32(-999999999),...
+'transmission_coefficient_error_lower',double([]),...
+'transmission_coefficient_error_upper',double([]),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([])),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''))
+}},...
'polarization_spectroscopy',struct(...
'b_field_modulus',double([]),...
'b_field_modulus_error_index',int32(-999999999),...
@@ -608,16 +877,18 @@ struct(...
'validity_timed',struct(...
'data',int32([]),...
'time',double([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -628,10 +899,59 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_x_ray_crystal.m b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_x_ray_crystal.m
index b28b530a26d8dee530027f0c61954fe00d1de261..461dc9ce5331b12571b083fa4f5f9732f0cc1088 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_x_ray_crystal.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_spectrometer_x_ray_crystal.m
@@ -1,10 +1,155 @@
function S = ids_empty_spectrometer_x_ray_crystal
% function S = ids_empty_spectrometer_x_ray_crystal
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
+'channel',{{struct(...
+'aperture',struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'geometry_type',int32(-999999999),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'bin',{{struct(...
+'instrument_function',struct(...
+'centre',double([]),...
+'centre_error_index',int32(-999999999),...
+'centre_error_lower',double([]),...
+'centre_error_upper',double([]),...
+'intensity',double([]),...
+'intensity_error_index',int32(-999999999),...
+'intensity_error_lower',double([]),...
+'intensity_error_upper',double([]),...
+'scale',double([]),...
+'scale_error_index',int32(-999999999),...
+'scale_error_lower',double([]),...
+'scale_error_upper',double([]),...
+'sigma',double([]),...
+'sigma_error_index',int32(-999999999),...
+'sigma_error_lower',double([]),...
+'sigma_error_upper',double([]),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([])),...
+'line_of_sight',struct(...
+'first_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'second_point',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40))),...
+'wavelength',double([]),...
+'wavelength_error_index',int32(-999999999),...
+'wavelength_error_lower',double([]),...
+'wavelength_error_upper',double([]),...
+'z_pixel_range',int32([]))
+}},...
'camera',struct(...
'camera_dimensions',double([]),...
'camera_dimensions_error_index',int32(-999999999),...
@@ -23,11 +168,78 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)),...
+'identifier','',...
+'line_of_sight',struct(...
+'first_point',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'second_point',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))),...
'pixel_dimensions',double([]),...
'pixel_dimensions_error_index',int32(-999999999),...
'pixel_dimensions_error_lower',double([]),...
'pixel_dimensions_error_upper',double([]),...
-'pixel_n',int32([]),...
+'pixel_position',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'pixels_n',int32([]),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
'x3_unit_vector',struct(...
'x',double(-9e+40),...
'x_error_index',int32(-999999999),...
@@ -41,51 +253,12 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))),...
-'code',struct(...
-'commit','',...
-'library',{{struct(...
-'commit','',...
-'name','',...
-'parameters','',...
-'repository','',...
-'version','')
-;}},...
-'name','',...
-'output_flag',int32([]),...
-'parameters','',...
-'repository','',...
-'version',''),...
'crystal',struct(...
'angle_bragg',double(-9e+40),...
'angle_bragg_error_index',int32(-999999999),...
'angle_bragg_error_lower',double(-9e+40),...
'angle_bragg_error_upper',double(-9e+40),...
-'angular_span_horizontal',double(-9e+40),...
-'angular_span_horizontal_error_index',int32(-999999999),...
-'angular_span_horizontal_error_lower',double(-9e+40),...
-'angular_span_horizontal_error_upper',double(-9e+40),...
-'angular_span_vertical',double(-9e+40),...
-'angular_span_vertical_error_index',int32(-999999999),...
-'angular_span_vertical_error_lower',double(-9e+40),...
-'angular_span_vertical_error_upper',double(-9e+40),...
-'curvature_horizontal',double(-9e+40),...
-'curvature_horizontal_error_index',int32(-999999999),...
-'curvature_horizontal_error_lower',double(-9e+40),...
-'curvature_horizontal_error_upper',double(-9e+40),...
-'curvature_vertical',double(-9e+40),...
-'curvature_vertical_error_index',int32(-999999999),...
-'curvature_vertical_error_lower',double(-9e+40),...
-'curvature_vertical_error_upper',double(-9e+40),...
-'geometry_type',struct(...
-'description','',...
-'index',int32(-999999999),...
-'name',''),...
-'height',double(-9e+40),...
-'height_error_index',int32(-999999999),...
-'height_error_lower',double(-9e+40),...
-'height_error_upper',double(-9e+40),...
-'material','',...
-'summit',struct(...
+'centre',struct(...
'phi',double(-9e+40),...
'phi_error_index',int32(-999999999),...
'phi_error_lower',double(-9e+40),...
@@ -98,14 +271,91 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40)),...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'cut',int32([]),...
+'geometry_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'identifier','',...
+'material',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'mesh_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'thickness',double(-9e+40),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double(-9e+40),...
+'thickness_error_upper',double(-9e+40),...
'wavelength_bragg',double(-9e+40),...
'wavelength_bragg_error_index',int32(-999999999),...
'wavelength_bragg_error_lower',double(-9e+40),...
'wavelength_bragg_error_upper',double(-9e+40),...
-'width',double(-9e+40),...
-'width_error_index',int32(-999999999),...
-'width_error_lower',double(-9e+40),...
-'width_error_upper',double(-9e+40),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
'x3_unit_vector',struct(...
'x',double(-9e+40),...
'x_error_index',int32(-999999999),...
@@ -119,6 +369,14 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double(-9e+40),...
'z_error_upper',double(-9e+40))),...
+'detection_efficiency',double([]),...
+'detection_efficiency_error_index',int32(-999999999),...
+'detection_efficiency_error_lower',double([]),...
+'detection_efficiency_error_upper',double([]),...
+'energies',double([]),...
+'energies_error_index',int32(-999999999),...
+'energies_error_lower',double([]),...
+'energies_error_upper',double([]),...
'energy_bound_lower',double([]),...
'energy_bound_lower_error_index',int32(-999999999),...
'energy_bound_lower_error_lower',double([]),...
@@ -127,58 +385,313 @@ struct(...
'energy_bound_upper_error_index',int32(-999999999),...
'energy_bound_upper_error_lower',double([]),...
'energy_bound_upper_error_upper',double([]),...
-'filter_window',struct(...
-'material','',...
+'exposure_time',double(-9e+40),...
+'exposure_time_error_index',int32(-999999999),...
+'exposure_time_error_lower',double(-9e+40),...
+'exposure_time_error_upper',double(-9e+40),...
+'filter_window',{{struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'geometry_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'identifier','',...
+'material',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'photon_absorption',double([]),...
+'photon_absorption_error_index',int32(-999999999),...
+'photon_absorption_error_lower',double([]),...
+'photon_absorption_error_upper',double([]),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
'thickness',double(-9e+40),...
'thickness_error_index',int32(-999999999),...
'thickness_error_lower',double(-9e+40),...
-'thickness_error_upper',double(-9e+40)),...
+'thickness_error_upper',double(-9e+40),...
+'wavelength_lower',double(-9e+40),...
+'wavelength_lower_error_index',int32(-999999999),...
+'wavelength_lower_error_lower',double(-9e+40),...
+'wavelength_lower_error_upper',double(-9e+40),...
+'wavelength_upper',double(-9e+40),...
+'wavelength_upper_error_index',int32(-999999999),...
+'wavelength_upper_error_lower',double(-9e+40),...
+'wavelength_upper_error_upper',double(-9e+40),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([]),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))
+}},...
'frame',{{struct(...
-'photon_count',double([]),...
-'photon_count_error_index',int32(-999999999),...
-'photon_count_error_lower',double([]),...
-'photon_count_error_upper',double([]),...
+'counts_bin_n',double([]),...
+'counts_bin_n_error_index',int32(-999999999),...
+'counts_bin_n_error_lower',double([]),...
+'counts_bin_n_error_upper',double([]),...
+'counts_n',double([]),...
+'counts_n_error_index',int32(-999999999),...
+'counts_n_error_lower',double([]),...
+'counts_n_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
-'ids_properties',struct(...
-'comment','',...
-'creation_date','',...
-'homogeneous_time',int32(-999999999),...
-'provider','',...
-'source','',...
-'version_put',struct(...
-'access_layer','',...
-'access_layer_language','',...
-'data_dictionary','')),...
-'integration_time',double(-9e+40),...
-'integration_time_error_index',int32(-999999999),...
-'integration_time_error_lower',double(-9e+40),...
-'integration_time_error_upper',double(-9e+40),...
-'t_e_proxy',struct(...
+}},...
+'instrument_function',struct(...
+'centre',double([]),...
+'centre_error_index',int32(-999999999),...
+'centre_error_lower',double([]),...
+'centre_error_upper',double([]),...
+'intensity',double([]),...
+'intensity_error_index',int32(-999999999),...
+'intensity_error_lower',double([]),...
+'intensity_error_upper',double([]),...
+'scale',double([]),...
+'scale_error_index',int32(-999999999),...
+'scale_error_lower',double([]),...
+'scale_error_upper',double([]),...
+'sigma',double([]),...
+'sigma_error_index',int32(-999999999),...
+'sigma_error_lower',double([]),...
+'sigma_error_upper',double([]),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]),...
+'wavelengths',double([]),...
+'wavelengths_error_index',int32(-999999999),...
+'wavelengths_error_lower',double([]),...
+'wavelengths_error_upper',double([])),...
+'profiles_line_integrated',struct(...
+'lines_of_sight_rho_tor_norm',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
-'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
-'t_i_proxy',struct(...
+'lines_of_sight_second_point',struct(...
+'phi',double([]),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double([]),...
+'phi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'t_e',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
-'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
-'time',double([]),...
-'velocity_tor_proxy',struct(...
+'t_i',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
-'time',double([]),...
'validity',int32(-999999999),...
'validity_timed',int32([])),...
+'time',double([]),...
+'velocity_tor',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'validity',int32(-999999999),...
+'validity_timed',int32([]))),...
+'reflector',{{struct(...
+'centre',struct(...
+'phi',double(-9e+40),...
+'phi_error_index',int32(-999999999),...
+'phi_error_lower',double(-9e+40),...
+'phi_error_upper',double(-9e+40),...
+'r',double(-9e+40),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double(-9e+40),...
+'r_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'curvature_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'geometry_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'identifier','',...
+'material',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'outline',struct(...
+'x1',double([]),...
+'x1_error_index',int32(-999999999),...
+'x1_error_lower',double([]),...
+'x1_error_upper',double([]),...
+'x2',double([]),...
+'x2_error_index',int32(-999999999),...
+'x2_error_lower',double([]),...
+'x2_error_upper',double([])),...
+'radius',double(-9e+40),...
+'radius_error_index',int32(-999999999),...
+'radius_error_lower',double(-9e+40),...
+'radius_error_upper',double(-9e+40),...
+'surface',double(-9e+40),...
+'surface_error_index',int32(-999999999),...
+'surface_error_lower',double(-9e+40),...
+'surface_error_upper',double(-9e+40),...
+'x1_curvature',double(-9e+40),...
+'x1_curvature_error_index',int32(-999999999),...
+'x1_curvature_error_lower',double(-9e+40),...
+'x1_curvature_error_upper',double(-9e+40),...
+'x1_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x1_width',double(-9e+40),...
+'x1_width_error_index',int32(-999999999),...
+'x1_width_error_lower',double(-9e+40),...
+'x1_width_error_upper',double(-9e+40),...
+'x2_curvature',double(-9e+40),...
+'x2_curvature_error_index',int32(-999999999),...
+'x2_curvature_error_lower',double(-9e+40),...
+'x2_curvature_error_upper',double(-9e+40),...
+'x2_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)),...
+'x2_width',double(-9e+40),...
+'x2_width_error_index',int32(-999999999),...
+'x2_width_error_lower',double(-9e+40),...
+'x2_width_error_upper',double(-9e+40),...
+'x3_unit_vector',struct(...
+'x',double(-9e+40),...
+'x_error_index',int32(-999999999),...
+'x_error_lower',double(-9e+40),...
+'x_error_upper',double(-9e+40),...
+'y',double(-9e+40),...
+'y_error_index',int32(-999999999),...
+'y_error_lower',double(-9e+40),...
+'y_error_upper',double(-9e+40),...
+'z',double(-9e+40),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double(-9e+40),...
+'z_error_upper',double(-9e+40)))
+}},...
'wavelength_frames',double([]),...
'wavelength_frames_error_index',int32(-999999999),...
'wavelength_frames_error_lower',double([]),...
@@ -186,4 +699,81 @@ struct(...
'z_frames',double([]),...
'z_frames_error_index',int32(-999999999),...
'z_frames_error_lower',double([]),...
-'z_frames_error_upper',double([]));
+'z_frames_error_upper',double([]))
+}},...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_summary.m b/matlab/TCV_IMAS/ids_empty/ids_empty_summary.m
index 9683a64fdb306dbb4c39e5176be8a1cca9ff2fcc..a648f9fefa6703980f2044ed4a8e1b5d2d0c3652 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_summary.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_summary.m
@@ -1,11 +1,19 @@
function S = ids_empty_summary
% function S = ids_empty_summary
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'boundary',struct(...
+'distance_inner_outer_separatrices',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
'elongation',struct(...
'source','',...
'value',double([]),...
@@ -89,16 +97,28 @@ struct(...
'value_error_upper',double([])),...
'type',struct(...
'source','',...
-'value',int32([]))),...
+'value',int32([])),...
+'x_point_main',struct(...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'source','',...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([]))),...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -243,826 +263,1872 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power',struct(...
+'neutron_rates',struct(...
+'dd',struct(...
+'beam_beam',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([]))),...
-'gas_injection_rates',struct(...
-'ammonia',struct(...
+'value_error_upper',double([])),...
+'beam_thermal',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'ammonia_deuterated',struct(...
+'thermal',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'argon',struct(...
+'total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'beryllium',struct(...
+'value_error_upper',double([]))),...
+'dt',struct(...
+'beam_beam',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'bottom',struct(...
+'beam_thermal',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'carbon',struct(...
+'thermal',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'deuterium',struct(...
+'total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'ethane',struct(...
+'value_error_upper',double([]))),...
+'thermal',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'ethylene',struct(...
+'total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'helium_3',struct(...
+'tt',struct(...
+'beam_beam',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'helium_4',struct(...
+'beam_thermal',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'hydrogen',struct(...
+'thermal',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'impurity_seeding',struct(...
-'source','',...
-'value',int32(-999999999)),...
-'krypton',struct(...
+'total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'lithium',struct(...
+'value_error_upper',double([])))),...
+'power',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'methane',struct(...
+'value_error_upper',double([]))),...
+'gas_injection_accumulated',struct(...
+'ammonia',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'methane_carbon_13',struct(...
+'ammonia_deuterated',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'methane_deuterated',struct(...
+'argon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'midplane',struct(...
+'beryllium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'neon',struct(...
+'bottom',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'nitrogen',struct(...
+'carbon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'oxygen',struct(...
+'deuterium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'propane',struct(...
+'ethane',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'silane',struct(...
+'ethylene',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'top',struct(...
+'helium_3',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'total',struct(...
+'helium_4',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'tritium',struct(...
+'hydrogen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'xenon',struct(...
+'impurity_seeding',struct(...
'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([]))),...
-'global_quantities',struct(...
-'b0',struct(...
+'value',int32(-999999999)),...
+'krypton',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beta_pol',struct(...
+'lithium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beta_pol_mhd',struct(...
+'methane',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beta_tor',struct(...
+'methane_carbon_13',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beta_tor_mhd',struct(...
+'methane_deuterated',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beta_tor_norm',struct(...
+'midplane',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beta_tor_norm_mhd',struct(...
+'neon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beta_tor_thermal_norm',struct(...
+'nitrogen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'current_alignment',struct(...
+'oxygen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'current_bootstrap',struct(...
+'propane',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'current_non_inductive',struct(...
+'silane',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'current_ohm',struct(...
+'top',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'denergy_diamagnetic_dt',struct(...
+'total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'denergy_thermal_dt',struct(...
+'tritium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'energy_b_field_pol',struct(...
+'xenon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_diamagnetic',struct(...
+'value_error_upper',double([]))),...
+'gas_injection_prefill',struct(...
+'ammonia',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_electrons_thermal',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'ammonia_deuterated',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_fast_parallel',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'argon',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_fast_perpendicular',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'beryllium',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_ion_total_thermal',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'bottom',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_mhd',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'carbon',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_thermal',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'deuterium',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'energy_total',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'ethane',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'fusion_gain',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'ethylene',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'greenwald_fraction',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'helium_3',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'h_98',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'helium_4',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'h_mode',struct(...
-'source','',...
-'value',int32([])),...
-'ip',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'hydrogen',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'li',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'impurity_seeding',struct(...
'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'li_mhd',struct(...
+'value',int32(-999999999)),...
+'krypton',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'power_bremsstrahlung',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'lithium',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'power_line',struct(...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'methane',struct(...
'source','',...
-'value',double([]),...
+'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'methane_carbon_13',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'methane_deuterated',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'midplane',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'neon',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'nitrogen',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'oxygen',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'propane',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'silane',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'top',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'total',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'tritium',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
+'xenon',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40))),...
+'gas_injection_rates',struct(...
+'ammonia',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'ammonia_deuterated',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'argon',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'beryllium',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'bottom',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'carbon',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'deuterium',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'ethane',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'ethylene',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'helium_3',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'helium_4',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'hydrogen',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'impurity_seeding',struct(...
+'source','',...
+'value',int32(-999999999)),...
+'krypton',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'lithium',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'methane',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'methane_carbon_13',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'methane_deuterated',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'midplane',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'propane',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([]))),...
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+'b0',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'value',double([]),...
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+'value_error_upper',double([])),...
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+'source','',...
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+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'denergy_diamagnetic_dt',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([]))),...
+'n_i_total',struct(...
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+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([]))),...
+'local',struct(...
+'divertor_plate',{{struct(...
+'flux_expansion',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
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+'value_error_lower',double([]),...
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+'value',double([]),...
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+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'carbon',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
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'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_ohm',struct(...
+'helium_3',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_radiated',struct(...
+'helium_4',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_radiated_inside_lcfs',struct(...
+'hydrogen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_radiated_outside_lcfs',struct(...
+'iron',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_steady',struct(...
+'krypton',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_synchrotron',struct(...
+'lithium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'q_95',struct(...
+'neon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'r0',struct(...
+'nitrogen',struct(...
'source','',...
-'value',double(-9e+40),...
+'value',double([]),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40)),...
-'ratio_tau_helium_fuel',struct(...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'oxygen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'resistance',struct(...
+'tritium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'tau_energy',struct(...
+'tungsten',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'tau_energy_98',struct(...
+'xenon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'tau_helium',struct(...
+'value_error_upper',double([]))),...
+'n_i_total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'tau_resistive',struct(...
+'name',struct(...
+'source','',...
+'value',''),...
+'power_flux_peak',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'v_loop',struct(...
+'t_e',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'volume',struct(...
+'t_i_average',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([]))),...
-'heating_current_drive',struct(...
-'ec',{{struct(...
-'angle_pol',struct(...
+'value_error_upper',double([])),...
+'zeff',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'angle_tor',struct(...
+'value_error_upper',double([])))
+}},...
+'divertor_target',{{struct(...
+'flux_expansion',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'current',struct(...
+'n_e',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'energy_fast',struct(...
+'n_i',struct(...
+'argon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'frequency',struct(...
+'beryllium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'harmonic',struct(...
-'source','',...
-'value',int32([])),...
-'polarisation',struct(...
-'source','',...
-'value',int32([])),...
-'position',struct(...
+'carbon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power',struct(...
+'deuterium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched',struct(...
+'helium_3',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])))
-;}},...
-'ic',{{struct(...
-'current',struct(...
+'value_error_upper',double([])),...
+'helium_4',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'e_field_plus_minus_ratio',struct(...
+'hydrogen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'energy_fast',struct(...
+'iron',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'frequency',struct(...
+'krypton',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'harmonic',struct(...
-'source','',...
-'value',int32([])),...
-'k_perpendicular',struct(...
+'lithium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'n_tor',struct(...
-'source','',...
-'value',int32([])),...
-'phase',struct(...
+'neon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'position',struct(...
+'nitrogen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power',struct(...
+'oxygen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched',struct(...
+'tritium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])))
-;}},...
-'lh',{{struct(...
-'current',struct(...
+'value_error_upper',double([])),...
+'tungsten',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'energy_fast',struct(...
+'xenon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'frequency',struct(...
+'value_error_upper',double([]))),...
+'n_i_total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'n_parallel',struct(...
+'name',struct(...
+'source','',...
+'value',''),...
+'power_flux_peak',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'position',struct(...
+'t_e',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power',struct(...
+'t_i_average',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched',struct(...
+'zeff',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])))
-;}},...
-'nbi',{{struct(...
-'angle',struct(...
-'source','',...
-'value',double(-9e+40),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40)),...
-'beam_current_fraction',struct(...
+}},...
+'itb',struct(...
+'e_field_parallel',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'beam_power_fraction',struct(...
+'magnetic_shear',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'current',struct(...
+'momentum_tor',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'direction',struct(...
-'source','',...
-'value',int32(-999999999)),...
-'energy',struct(...
+'n_e',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'position',struct(...
-'phi',struct(...
-'source','',...
-'value',double(-9e+40),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40)),...
-'r',struct(...
-'source','',...
-'value',double(-9e+40),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40)),...
-'z',struct(...
+'n_i',struct(...
+'argon',struct(...
'source','',...
-'value',double(-9e+40),...
+'value',double([]),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40))),...
-'power',struct(...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'beryllium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched',struct(...
+'carbon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'species',struct(...
-'a',struct(...
+'deuterium',struct(...
'source','',...
-'value',double(-9e+40),...
+'value',double([]),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40)),...
-'label',struct(...
-'source','',...
-'value',''),...
-'z_n',struct(...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'helium_3',struct(...
'source','',...
-'value',double(-9e+40),...
+'value',double([]),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40))),...
-'tangency_radius',struct(...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'helium_4',struct(...
'source','',...
-'value',double(-9e+40),...
+'value',double([]),...
'value_error_index',int32(-999999999),...
-'value_error_lower',double(-9e+40),...
-'value_error_upper',double(-9e+40)))
-;}},...
-'power_additional',struct(...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'hydrogen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_ec',struct(...
+'iron',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_ic',struct(...
+'krypton',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched_ec',struct(...
+'lithium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched_ic',struct(...
+'neon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched_lh',struct(...
+'nitrogen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched_nbi',struct(...
+'oxygen',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_launched_nbi_co_injected_ratio',struct(...
+'tritium',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_lh',struct(...
+'tungsten',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'power_nbi',struct(...
+'xenon',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))),...
-'ids_properties',struct(...
-'comment','',...
-'creation_date','',...
-'homogeneous_time',int32(-999999999),...
-'provider','',...
-'source','',...
-'version_put',struct(...
-'access_layer','',...
-'access_layer_language','',...
-'data_dictionary','')),...
-'kicks',struct(...
-'occurrence',struct(...
-'source','',...
-'value',int32(-999999999))),...
-'limiter',struct(...
-'material',struct(...
-'description','',...
-'index',int32(-999999999),...
-'name','')),...
-'line_average',struct(...
-'dn_e_dt',struct(...
+'n_i_total',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'isotope_fraction_hydrogen',struct(...
+'position',struct(...
+'psi',double([]),...
+'psi_error_index',int32(-999999999),...
+'psi_error_lower',double([]),...
+'psi_error_upper',double([]),...
+'rho_tor',double([]),...
+'rho_tor_error_index',int32(-999999999),...
+'rho_tor_error_lower',double([]),...
+'rho_tor_error_upper',double([]),...
+'rho_tor_norm',double([]),...
+'rho_tor_norm_error_index',int32(-999999999),...
+'rho_tor_norm_error_lower',double([]),...
+'rho_tor_norm_error_upper',double([])),...
+'q',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'meff_hydrogenic',struct(...
+'t_e',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'n_e',struct(...
+'t_i_average',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
-'n_i',struct(...
+'velocity_tor',struct(...
'argon',struct(...
'source','',...
'value',double([]),...
@@ -1159,32 +2225,13 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))),...
-'n_i_total',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'t_e',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'t_i_average',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
'zeff',struct(...
'source','',...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))),...
-'local',struct(...
-'divertor_plate',{{struct(...
+'limiter',struct(...
'flux_expansion',struct(...
'source','',...
'value',double([]),...
@@ -1303,6 +2350,12 @@ struct(...
'name',struct(...
'source','',...
'value',''),...
+'power_flux_peak',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
't_e',struct(...
'source','',...
'value',double([]),...
@@ -1320,9 +2373,14 @@ struct(...
'value',double([]),...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
-'value_error_upper',double([])))
-;}},...
-'itb',struct(...
+'value_error_upper',double([]))),...
+'magnetic_axis',struct(...
+'b_field',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
'e_field_parallel',struct(...
'source','',...
'value',double([]),...
@@ -1455,6 +2513,10 @@ struct(...
'psi_error_index',int32(-999999999),...
'psi_error_lower',double([]),...
'psi_error_upper',double([]),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
'rho_tor',double([]),...
'rho_tor_error_index',int32(-999999999),...
'rho_tor_error_lower',double([]),...
@@ -1462,7 +2524,11 @@ struct(...
'rho_tor_norm',double([]),...
'rho_tor_norm_error_index',int32(-999999999),...
'rho_tor_norm_error_lower',double([]),...
-'rho_tor_norm_error_upper',double([])),...
+'rho_tor_norm_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
'q',struct(...
'source','',...
'value',double([]),...
@@ -1584,150 +2650,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))),...
-'limiter',struct(...
-'flux_expansion',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'n_e',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'n_i',struct(...
-'argon',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'beryllium',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'carbon',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'deuterium',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'helium_3',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'helium_4',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'hydrogen',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'iron',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'krypton',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'lithium',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'neon',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'nitrogen',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'oxygen',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'tritium',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'tungsten',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'xenon',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([]))),...
-'n_i_total',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'name',struct(...
-'source','',...
-'value',''),...
-'t_e',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'t_i_average',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'zeff',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([]))),...
-'magnetic_axis',struct(...
-'b_field',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
+'pedestal',struct(...
'e_field_parallel',struct(...
'source','',...
'value',double([]),...
@@ -1860,10 +2783,6 @@ struct(...
'psi_error_index',int32(-999999999),...
'psi_error_lower',double([]),...
'psi_error_upper',double([]),...
-'r',double([]),...
-'r_error_index',int32(-999999999),...
-'r_error_lower',double([]),...
-'r_error_upper',double([]),...
'rho_tor',double([]),...
'rho_tor_error_index',int32(-999999999),...
'rho_tor_error_lower',double([]),...
@@ -1871,11 +2790,7 @@ struct(...
'rho_tor_norm',double([]),...
'rho_tor_norm_error_index',int32(-999999999),...
'rho_tor_norm_error_lower',double([]),...
-'rho_tor_norm_error_upper',double([]),...
-'z',double([]),...
-'z_error_index',int32(-999999999),...
-'z_error_lower',double([]),...
-'z_error_upper',double([])),...
+'rho_tor_norm_error_upper',double([])),...
'q',struct(...
'source','',...
'value',double([]),...
@@ -1997,7 +2912,26 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))),...
-'pedestal',struct(...
+'r_eff_norm_2_3',struct(...
+'effective_helical_ripple',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'iota',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([])),...
+'plateau_factor',struct(...
+'source','',...
+'value',double([]),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double([]),...
+'value_error_upper',double([]))),...
+'separatrix',struct(...
'e_field_parallel',struct(...
'source','',...
'value',double([]),...
@@ -2259,26 +3193,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))),...
-'r_eff_norm_2_3',struct(...
-'effective_helical_ripple',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'iota',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([])),...
-'plateau_factor',struct(...
-'source','',...
-'value',double([]),...
-'value_error_index',int32(-999999999),...
-'value_error_lower',double([]),...
-'value_error_upper',double([]))),...
-'separatrix',struct(...
+'separatrix_average',struct(...
'e_field_parallel',struct(...
'source','',...
'value',double([]),...
@@ -2543,6 +3458,10 @@ struct(...
'magnetic_shear_flag',struct(...
'source','',...
'value',int32(-999999999)),...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'pedestal_fits',struct(...
'linear',struct(...
'b_field_pedestal_top_hfs',struct(...
@@ -3101,6 +4020,12 @@ struct(...
'occurrence',struct(...
'source','',...
'value',int32(-999999999))),...
+'plasma_duration',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
'rmps',struct(...
'occurrence',struct(...
'source','',...
@@ -3174,6 +4099,12 @@ struct(...
'comment','',...
'name',''),...
'time',double([]),...
+'time_breakdown',struct(...
+'source','',...
+'value',double(-9e+40),...
+'value_error_index',int32(-999999999),...
+'value_error_lower',double(-9e+40),...
+'value_error_upper',double(-9e+40)),...
'time_width',double([]),...
'time_width_error_index',int32(-999999999),...
'time_width_error_lower',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_temporary.m b/matlab/TCV_IMAS/ids_empty/ids_empty_temporary.m
index 3a6b2e3aee8a3b159f696d7795181592a7532896..5d9835fdcf980152b9329c6104a0f04cad2df693 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_temporary.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_temporary.m
@@ -1,19 +1,23 @@
function S = ids_empty_temporary
% function S = ids_empty_temporary
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -28,7 +32,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}},...
+}},...
'constant_float1d',{{struct(...
'identifier',struct(...
'description','',...
@@ -38,7 +42,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'constant_float2d',{{struct(...
'identifier',struct(...
'description','',...
@@ -48,7 +52,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'constant_float3d',{{struct(...
'identifier',struct(...
'description','',...
@@ -58,7 +62,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'constant_float4d',{{struct(...
'identifier',struct(...
'description','',...
@@ -68,7 +72,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'constant_float5d',{{struct(...
'identifier',struct(...
'description','',...
@@ -78,7 +82,7 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'constant_float6d',{{struct(...
'identifier',struct(...
'description','',...
@@ -88,49 +92,49 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'constant_integer0d',{{struct(...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
'value',int32(-999999999))
-;}},...
+}},...
'constant_integer1d',{{struct(...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
'value',int32([]))
-;}},...
+}},...
'constant_integer2d',{{struct(...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
'value',int32([]))
-;}},...
+}},...
'constant_integer3d',{{struct(...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
'value',int32([]))
-;}},...
+}},...
'constant_string0d',{{struct(...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
'value','')
-;}},...
+}},...
'constant_string1d',{{struct(...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
'value',{{}})
-;}},...
+}},...
'dynamic_float1d',{{struct(...
'identifier',struct(...
'description','',...
@@ -142,7 +146,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_float2d',{{struct(...
'identifier',struct(...
'description','',...
@@ -154,7 +158,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_float3d',{{struct(...
'identifier',struct(...
'description','',...
@@ -166,7 +170,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_float4d',{{struct(...
'identifier',struct(...
'description','',...
@@ -178,7 +182,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_float5d',{{struct(...
'identifier',struct(...
'description','',...
@@ -190,7 +194,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_float6d',{{struct(...
'identifier',struct(...
'description','',...
@@ -202,7 +206,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_integer1d',{{struct(...
'identifier',struct(...
'description','',...
@@ -211,7 +215,7 @@ struct(...
'value',struct(...
'data',int32([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_integer2d',{{struct(...
'identifier',struct(...
'description','',...
@@ -220,7 +224,7 @@ struct(...
'value',struct(...
'data',int32([]),...
'time',double([])))
-;}},...
+}},...
'dynamic_integer3d',{{struct(...
'identifier',struct(...
'description','',...
@@ -229,11 +233,56 @@ struct(...
'value',struct(...
'data',int32([]),...
'time',double([])))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_tf.m b/matlab/TCV_IMAS/ids_empty/ids_empty_tf.m
index a56d8d6bfd70afaf0944734e2942e478ad54b32a..6e48f8b5cfd4a5155684a9102002ceb9ff336e87 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_tf.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_tf.m
@@ -1,9 +1,11 @@
function S = ids_empty_tf
% function S = ids_empty_tf
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'b_field_tor_vacuum_r',struct(...
'data',double([]),...
@@ -11,6 +13,22 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])),...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
'coil',{{struct(...
'conductor',{{struct(...
'cross_section',struct(...
@@ -97,7 +115,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'current',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -120,7 +138,7 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'coils_n',int32(-999999999),...
'delta_b_field_tor_vacuum_r',struct(...
'data',double([]),...
@@ -140,7 +158,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'a_field_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -152,7 +170,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'a_field_z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -164,7 +182,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_r',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -176,7 +194,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_tor',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -188,7 +206,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'b_field_z',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -200,7 +218,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'grid',struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -216,15 +234,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -242,11 +260,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -258,12 +277,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -272,15 +299,60 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}}),...
+}})
+}})
+}}),...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -288,6 +360,10 @@ struct(...
'access_layer_language','',...
'data_dictionary','')),...
'is_periodic',int32(-999999999),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
'r0',double(-9e+40),...
'r0_error_index',int32(-999999999),...
'r0_error_lower',double(-9e+40),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_thomson_scattering.m b/matlab/TCV_IMAS/ids_empty/ids_empty_thomson_scattering.m
index c8548720f92a76e876be2ef01fe78532e041f34c..93f795aba5f0ffb4e51f5295a1c6f2c3627f9de0 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_thomson_scattering.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_thomson_scattering.m
@@ -1,9 +1,11 @@
function S = ids_empty_thomson_scattering
% function S = ids_empty_thomson_scattering
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'channel',{{struct(...
'delta_position',struct(...
@@ -20,6 +22,12 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double([]),...
'z_error_upper',double([])),...
+'distance_separatrix_midplane',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
'identifier','',...
'n_e',struct(...
'data',double([]),...
@@ -47,29 +55,93 @@ struct(...
'data_error_lower',double([]),...
'data_error_upper',double([]),...
'time',double([])))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
'repository','',...
'version',''),...
+'equilibrium_id',struct(...
+'data_entry',struct(...
+'machine','',...
+'pulse',int32(-999999999),...
+'pulse_type','',...
+'run',int32(-999999999),...
+'user',''),...
+'name','',...
+'occurrence',int32(-999999999)),...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'latency',double(-9e+40),...
+'latency_error_index',int32(-999999999),...
+'latency_error_lower',double(-9e+40),...
+'latency_error_upper',double(-9e+40),...
+'midplane',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_transport_solver_numerics.m b/matlab/TCV_IMAS/ids_empty/ids_empty_transport_solver_numerics.m
index dce85bdbe857e276215d9009839a8ca8701e0e62..9f9e07a5f64f9bfe2019fce6d31daed043ac93d9 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_transport_solver_numerics.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_transport_solver_numerics.m
@@ -1,9 +1,11 @@
function S = ids_empty_transport_solver_numerics
% function S = ids_empty_transport_solver_numerics
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'boundary_conditions_1d',{{struct(...
'current',struct(...
@@ -139,7 +141,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
@@ -148,7 +150,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'momentum_tor',struct(...
'identifier',struct(...
'description','',...
@@ -163,7 +165,7 @@ struct(...
'value_error_lower',double([]),...
'value_error_upper',double([])),...
'time',double(-9e+40))
-;}},...
+}},...
'boundary_conditions_ggd',{{struct(...
'current',{{struct(...
'grid_index',int32(-999999999),...
@@ -176,7 +178,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'electrons',struct(...
'energy',{{struct(...
'grid_index',int32(-999999999),...
@@ -189,7 +191,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'particles',{{struct(...
'grid_index',int32(-999999999),...
'grid_subset_index',int32(-999999999),...
@@ -201,7 +203,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}}),...
'grid',struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -217,15 +219,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -243,11 +245,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -259,12 +262,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -273,9 +284,9 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}}),...
+}})
+}})
+}}),...
'ion',{{struct(...
'a',double(-9e+40),...
'a_error_index',int32(-999999999),...
@@ -292,7 +303,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'particles',{{struct(...
@@ -306,7 +317,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'state',{{struct(...
'electron_configuration','',...
'energy',{{struct(...
@@ -320,7 +331,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'is_neutral',int32(-999999999),...
'label','',...
'neutral_type',struct(...
@@ -338,7 +349,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'vibrational_level',double(-9e+40),...
'vibrational_level_error_index',int32(-999999999),...
'vibrational_level_error_lower',double(-9e+40),...
@@ -352,7 +363,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
@@ -361,18 +372,20 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -473,7 +486,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
@@ -482,9 +495,9 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'time_step',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -910,7 +923,7 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
@@ -919,13 +932,58 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -940,7 +998,7 @@ struct(...
'descriptions',{{}},...
'names',{{}},...
'time',double(-9e+40))
-;}},...
+}},...
'solver',struct(...
'description','',...
'index',int32(-999999999),...
@@ -949,13 +1007,13 @@ struct(...
'control_parameters',struct(...
'integer0d',{{struct(...
'value',int32(-999999999))
-;}},...
+}},...
'real0d',{{struct(...
'value',double(-9e+40),...
'value_error_index',int32(-999999999),...
'value_error_lower',double(-9e+40),...
'value_error_upper',double(-9e+40))
-;}}),...
+}}),...
'd_dvolume_drho_tor_dt',double([]),...
'd_dvolume_drho_tor_dt_error_index',int32(-999999999),...
'd_dvolume_drho_tor_dt_error_lower',double([]),...
@@ -978,13 +1036,13 @@ struct(...
'value_error_index',int32(-999999999),...
'value_error_lower',double([]),...
'value_error_upper',double([]))
-;}},...
+}},...
'coefficient',{{struct(...
'profile',double([]),...
'profile_error_index',int32(-999999999),...
'profile_error_lower',double([]),...
'profile_error_upper',double([]))
-;}},...
+}},...
'computation_mode',struct(...
'description','',...
'index',int32(-999999999),...
@@ -1029,7 +1087,7 @@ struct(...
'profile_error_lower',double([]),...
'profile_error_upper',double([]),...
'state_index',int32(-999999999)))
-;}},...
+}},...
'grid',struct(...
'area',double([]),...
'area_error_index',int32(-999999999),...
@@ -1068,7 +1126,7 @@ struct(...
'volume_error_lower',double([]),...
'volume_error_upper',double([])),...
'time',double(-9e+40))
-;}},...
+}},...
'time',double([]),...
'time_step',struct(...
'data',double([]),...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_turbulence.m b/matlab/TCV_IMAS/ids_empty/ids_empty_turbulence.m
index 2a35e9351af752588401c3d3798ce6445a7138a8..70dfb428eed70511128ae117981c8f8b2846e90e 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_turbulence.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_turbulence.m
@@ -1,19 +1,23 @@
function S = ids_empty_turbulence
% function S = ids_empty_turbulence
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -29,7 +33,7 @@ struct(...
'dim2_error_lower',double([]),...
'dim2_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'grid_2d_type',struct(...
'description','',...
'index',int32(-999999999),...
@@ -38,6 +42,51 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
@@ -81,7 +130,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'neutral_index',int32(-999999999),...
'temperature',double([]),...
@@ -92,7 +141,7 @@ struct(...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'neutral',{{struct(...
'density',double([]),...
'density_error_index',int32(-999999999),...
@@ -116,14 +165,14 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'ion_index',int32(-999999999),...
'label','',...
'temperature',double([]),...
'temperature_error_index',int32(-999999999),...
'temperature_error_lower',double([]),...
'temperature_error_upper',double([]))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_wall.m b/matlab/TCV_IMAS/ids_empty/ids_empty_wall.m
index 8970d8f87d69e5aaa4b4db659d90a4c729d94bc1..37950537e7505159f7b986afac975cd1d9a4cf06 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_wall.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_wall.m
@@ -1,19 +1,23 @@
function S = ids_empty_wall
% function S = ids_empty_wall
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -45,7 +49,7 @@ struct(...
'resistivity_error_index',int32(-999999999),...
'resistivity_error_lower',double(-9e+40),...
'resistivity_error_upper',double(-9e+40))
-;}}),...
+}}),...
'mobile',struct(...
'type',struct(...
'description','',...
@@ -64,7 +68,7 @@ struct(...
'z_error_index',int32(-999999999),...
'z_error_lower',double([]),...
'z_error_upper',double([]))
-;}},...
+}},...
'phi_extensions',double([]),...
'phi_extensions_error_index',int32(-999999999),...
'phi_extensions_error_lower',double([]),...
@@ -73,90 +77,839 @@ struct(...
'resistivity_error_index',int32(-999999999),...
'resistivity_error_lower',double(-9e+40),...
'resistivity_error_upper',double(-9e+40))
-;}}),...
+}}),...
+'type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'vessel',struct(...
'type',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
-'vessel',struct(...
-'type',struct(...
+'unit',{{struct(...
+'annular',struct(...
+'centreline',struct(...
+'closed',int32(-999999999),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'outline_inner',struct(...
+'closed',int32(-999999999),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'outline_outer',struct(...
+'closed',int32(-999999999),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'resistivity',double(-9e+40),...
+'resistivity_error_index',int32(-999999999),...
+'resistivity_error_lower',double(-9e+40),...
+'resistivity_error_upper',double(-9e+40),...
+'thickness',double([]),...
+'thickness_error_index',int32(-999999999),...
+'thickness_error_lower',double([]),...
+'thickness_error_upper',double([])),...
+'element',{{struct(...
+'j_tor',struct(...
+'data',double([]),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double([]),...
+'data_error_upper',double([]),...
+'time',double([])),...
+'name','',...
+'outline',struct(...
+'closed',int32(-999999999),...
+'r',double([]),...
+'r_error_index',int32(-999999999),...
+'r_error_lower',double([]),...
+'r_error_upper',double([]),...
+'z',double([]),...
+'z_error_index',int32(-999999999),...
+'z_error_lower',double([]),...
+'z_error_upper',double([])),...
+'resistance',double(-9e+40),...
+'resistance_error_index',int32(-999999999),...
+'resistance_error_lower',double(-9e+40),...
+'resistance_error_upper',double(-9e+40),...
+'resistivity',double(-9e+40),...
+'resistivity_error_index',int32(-999999999),...
+'resistivity_error_lower',double(-9e+40),...
+'resistivity_error_upper',double(-9e+40))
+}},...
+'identifier','',...
+'name','')
+}}))
+}},...
+'description_ggd',{{struct(...
+'ggd',{{struct(...
+'energy_fluxes',struct(...
+'current',struct(...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
+'kinetic',struct(...
+'electrons',struct(...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
+'ion',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'neutral_index',int32(-999999999),...
+'state',{{struct(...
+'electron_configuration','',...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','',...
+'z_max',double(-9e+40),...
+'z_max_error_index',int32(-999999999),...
+'z_max_error_lower',double(-9e+40),...
+'z_max_error_upper',double(-9e+40),...
+'z_min',double(-9e+40),...
+'z_min_error_index',int32(-999999999),...
+'z_min_error_lower',double(-9e+40),...
+'z_min_error_upper',double(-9e+40))
+}},...
+'z_ion',double(-9e+40),...
+'z_ion_error_index',int32(-999999999),...
+'z_ion_error_lower',double(-9e+40),...
+'z_ion_error_upper',double(-9e+40))
+}},...
+'neutral',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ion_index',int32(-999999999),...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'state',{{struct(...
+'electron_configuration','',...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'neutral_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','')
+}})
+}}),...
+'radiation',struct(...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
+'recombination',struct(...
+'ion',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'neutral_index',int32(-999999999),...
+'state',{{struct(...
+'electron_configuration','',...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','',...
+'z_max',double(-9e+40),...
+'z_max_error_index',int32(-999999999),...
+'z_max_error_lower',double(-9e+40),...
+'z_max_error_upper',double(-9e+40),...
+'z_min',double(-9e+40),...
+'z_min_error_index',int32(-999999999),...
+'z_min_error_lower',double(-9e+40),...
+'z_min_error_upper',double(-9e+40))
+}},...
+'z_ion',double(-9e+40),...
+'z_ion_error_index',int32(-999999999),...
+'z_ion_error_lower',double(-9e+40),...
+'z_ion_error_upper',double(-9e+40))
+}},...
+'neutral',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ion_index',int32(-999999999),...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'state',{{struct(...
+'electron_configuration','',...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'neutral_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','')
+}})
+}})),...
+'particle_fluxes',struct(...
+'electrons',struct(...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}}),...
+'ion',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'neutral_index',int32(-999999999),...
+'state',{{struct(...
+'electron_configuration','',...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','',...
+'z_max',double(-9e+40),...
+'z_max_error_index',int32(-999999999),...
+'z_max_error_lower',double(-9e+40),...
+'z_max_error_upper',double(-9e+40),...
+'z_min',double(-9e+40),...
+'z_min_error_index',int32(-999999999),...
+'z_min_error_lower',double(-9e+40),...
+'z_min_error_upper',double(-9e+40))
+}},...
+'z_ion',double(-9e+40),...
+'z_ion_error_index',int32(-999999999),...
+'z_ion_error_lower',double(-9e+40),...
+'z_ion_error_upper',double(-9e+40))
+}},...
+'neutral',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'ion_index',int32(-999999999),...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'state',{{struct(...
+'electron_configuration','',...
+'emitted',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'incident',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'label','',...
+'neutral_type',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','')
+}})
+}}),...
+'power_density',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'recycling',struct(...
+'ion',{{struct(...
+'coefficient',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'neutral_index',int32(-999999999),...
+'state',{{struct(...
+'coefficient',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'electron_configuration','',...
+'label','',...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','',...
+'z_max',double(-9e+40),...
+'z_max_error_index',int32(-999999999),...
+'z_max_error_lower',double(-9e+40),...
+'z_max_error_upper',double(-9e+40),...
+'z_min',double(-9e+40),...
+'z_min_error_index',int32(-999999999),...
+'z_min_error_lower',double(-9e+40),...
+'z_min_error_upper',double(-9e+40))
+}},...
+'z_ion',double(-9e+40),...
+'z_ion_error_index',int32(-999999999),...
+'z_ion_error_lower',double(-9e+40),...
+'z_ion_error_upper',double(-9e+40))
+}},...
+'neutral',{{struct(...
+'coefficient',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'ion_index',int32(-999999999),...
+'label','',...
+'multiple_states_flag',int32(-999999999),...
+'state',{{struct(...
+'coefficient',{{struct(...
+'coefficients',double([]),...
+'coefficients_error_index',int32(-999999999),...
+'coefficients_error_lower',double([]),...
+'coefficients_error_upper',double([]),...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'values',double([]),...
+'values_error_index',int32(-999999999),...
+'values_error_lower',double([]),...
+'values_error_upper',double([]))
+}},...
+'electron_configuration','',...
+'label','',...
+'neutral_type',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
-'unit',{{struct(...
-'annular',struct(...
-'centreline',struct(...
-'closed',int32(-999999999),...
-'r',double([]),...
-'r_error_index',int32(-999999999),...
-'r_error_lower',double([]),...
-'r_error_upper',double([]),...
-'z',double([]),...
-'z_error_index',int32(-999999999),...
-'z_error_lower',double([]),...
-'z_error_upper',double([])),...
-'outline_inner',struct(...
-'closed',int32(-999999999),...
-'r',double([]),...
-'r_error_index',int32(-999999999),...
-'r_error_lower',double([]),...
-'r_error_upper',double([]),...
-'z',double([]),...
-'z_error_index',int32(-999999999),...
-'z_error_lower',double([]),...
-'z_error_upper',double([])),...
-'outline_outer',struct(...
-'closed',int32(-999999999),...
-'r',double([]),...
-'r_error_index',int32(-999999999),...
-'r_error_lower',double([]),...
-'r_error_upper',double([]),...
-'z',double([]),...
-'z_error_index',int32(-999999999),...
-'z_error_lower',double([]),...
-'z_error_upper',double([])),...
-'resistivity',double(-9e+40),...
-'resistivity_error_index',int32(-999999999),...
-'resistivity_error_lower',double(-9e+40),...
-'resistivity_error_upper',double(-9e+40),...
-'thickness',double([]),...
-'thickness_error_index',int32(-999999999),...
-'thickness_error_lower',double([]),...
-'thickness_error_upper',double([])),...
-'element',{{struct(...
-'j_tor',struct(...
-'data',double([]),...
-'data_error_index',int32(-999999999),...
-'data_error_lower',double([]),...
-'data_error_upper',double([]),...
-'time',double([])),...
-'name','',...
-'outline',struct(...
-'closed',int32(-999999999),...
-'r',double([]),...
-'r_error_index',int32(-999999999),...
-'r_error_lower',double([]),...
-'r_error_upper',double([]),...
-'z',double([]),...
-'z_error_index',int32(-999999999),...
-'z_error_lower',double([]),...
-'z_error_upper',double([])),...
-'resistance',double(-9e+40),...
-'resistance_error_index',int32(-999999999),...
-'resistance_error_lower',double(-9e+40),...
-'resistance_error_upper',double(-9e+40),...
-'resistivity',double(-9e+40),...
-'resistivity_error_index',int32(-999999999),...
-'resistivity_error_lower',double(-9e+40),...
-'resistivity_error_upper',double(-9e+40))
-;}},...
-'identifier','',...
-'name','')
-;}}))
-;}},...
-'description_ggd',{{struct(...
-'ggd',{{struct(...
-'power_density',{{struct(...
+'vibrational_level',double(-9e+40),...
+'vibrational_level_error_index',int32(-999999999),...
+'vibrational_level_error_lower',double(-9e+40),...
+'vibrational_level_error_upper',double(-9e+40),...
+'vibrational_mode','')
+}})
+}}),...
+'temperature',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
'coefficients_error_lower',double([]),...
@@ -167,8 +920,9 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
-'temperature',{{struct(...
+}},...
+'time',double(-9e+40),...
+'v_biasing',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
'coefficients_error_lower',double([]),...
@@ -179,9 +933,8 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
-'time',double(-9e+40))
-;}},...
+}})
+}},...
'grid_ggd',{{struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -197,15 +950,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -223,11 +976,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -239,12 +993,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -253,16 +1015,31 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}},...
+}})
+}})
+}},...
+'time',double(-9e+40))
+}},...
+'material',{{struct(...
+'grid_subset',{{struct(...
+'grid_index',int32(-999999999),...
+'grid_subset_index',int32(-999999999),...
+'identifiers',struct(...
+'descriptions',{{}},...
+'indices',int32([]),...
+'names',{{}}))
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'type',struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
+'first_wall_enclosed_volume',double(-9e+40),...
+'first_wall_enclosed_volume_error_index',int32(-999999999),...
+'first_wall_enclosed_volume_error_lower',double(-9e+40),...
+'first_wall_enclosed_volume_error_upper',double(-9e+40),...
'first_wall_power_flux_peak',struct(...
'data',double([]),...
'data_error_index',int32(-999999999),...
@@ -318,11 +1095,41 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'gas_puff',double([]),...
'gas_puff_error_index',int32(-999999999),...
'gas_puff_error_lower',double([]),...
'gas_puff_error_upper',double([]),...
+'incident_species',{{struct(...
+'element',{{struct(...
+'a',double(-9e+40),...
+'a_error_index',int32(-999999999),...
+'a_error_lower',double(-9e+40),...
+'a_error_upper',double(-9e+40),...
+'atoms_n',int32(-999999999),...
+'multiplicity',double(-9e+40),...
+'multiplicity_error_index',int32(-999999999),...
+'multiplicity_error_lower',double(-9e+40),...
+'multiplicity_error_upper',double(-9e+40),...
+'z_n',double(-9e+40),...
+'z_n_error_index',int32(-999999999),...
+'z_n_error_lower',double(-9e+40),...
+'z_n_error_upper',double(-9e+40))
+}},...
+'energies',double([]),...
+'energies_error_index',int32(-999999999),...
+'energies_error_lower',double([]),...
+'energies_error_upper',double([]),...
+'label','',...
+'sputtering_chemical_coefficient',double([]),...
+'sputtering_chemical_coefficient_error_index',int32(-999999999),...
+'sputtering_chemical_coefficient_error_lower',double([]),...
+'sputtering_chemical_coefficient_error_upper',double([]),...
+'sputtering_physical_coefficient',double([]),...
+'sputtering_physical_coefficient_error_index',int32(-999999999),...
+'sputtering_physical_coefficient_error_lower',double([]),...
+'sputtering_physical_coefficient_error_upper',double([]))
+}},...
'label','',...
'particle_flux_from_plasma',double([]),...
'particle_flux_from_plasma_error_index',int32(-999999999),...
@@ -344,19 +1151,11 @@ struct(...
'recycling_particles_coefficient_error_index',int32(-999999999),...
'recycling_particles_coefficient_error_lower',double([]),...
'recycling_particles_coefficient_error_upper',double([]),...
-'sputtering_chemical_coefficient',double([]),...
-'sputtering_chemical_coefficient_error_index',int32(-999999999),...
-'sputtering_chemical_coefficient_error_lower',double([]),...
-'sputtering_chemical_coefficient_error_upper',double([]),...
-'sputtering_physical_coefficient',double([]),...
-'sputtering_physical_coefficient_error_index',int32(-999999999),...
-'sputtering_physical_coefficient_error_lower',double([]),...
-'sputtering_physical_coefficient_error_upper',double([]),...
'wall_inventory',double([]),...
'wall_inventory_error_index',int32(-999999999),...
'wall_inventory_error_lower',double([]),...
'wall_inventory_error_upper',double([]))
-;}},...
+}},...
'power_black_body',double([]),...
'power_black_body_error_index',int32(-999999999),...
'power_black_body_error_lower',double([]),...
@@ -417,10 +1216,61 @@ struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
'access_layer','',...
'access_layer_language','',...
'data_dictionary','')),...
+'temperature_reference',struct(...
+'data',double(-9e+40),...
+'data_error_index',int32(-999999999),...
+'data_error_lower',double(-9e+40),...
+'data_error_upper',double(-9e+40),...
+'description',''),...
'time',double([]));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_waves.m b/matlab/TCV_IMAS/ids_empty/ids_empty_waves.m
index af698a77d29facdaee508a3f2c6968be38730302..d6611083113fdf6a9c7c6a492b3855ad4186373b 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_empty_waves.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_waves.m
@@ -1,19 +1,23 @@
function S = ids_empty_waves
% function S = ids_empty_waves
%
-% File written automatically using struct2m.m
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
+S = ...
struct(...
'code',struct(...
'commit','',...
+'description','',...
'library',{{struct(...
'commit','',...
+'description','',...
'name','',...
'parameters','',...
'repository','',...
'version','')
-;}},...
+}},...
'name','',...
'output_flag',int32([]),...
'parameters','',...
@@ -70,7 +74,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'power',double([]),...
@@ -97,16 +101,25 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'length',double([]),...
'length_error_index',int32(-999999999),...
'length_error_lower',double([]),...
'length_error_upper',double([]),...
+'phase',struct(...
+'angle',double([]),...
+'angle_error_index',int32(-999999999),...
+'angle_error_lower',double([]),...
+'angle_error_upper',double([]),...
+'curvature',double([]),...
+'curvature_error_index',int32(-999999999),...
+'curvature_error_lower',double([]),...
+'curvature_error_upper',double([])),...
'position',struct(...
'phi',double([]),...
'phi_error_index',int32(-999999999),...
@@ -141,19 +154,40 @@ struct(...
'power_initial_error_index',int32(-999999999),...
'power_initial_error_lower',double(-9e+40),...
'power_initial_error_upper',double(-9e+40),...
+'spot',struct(...
+'angle',double([]),...
+'angle_error_index',int32(-999999999),...
+'angle_error_lower',double([]),...
+'angle_error_upper',double([]),...
+'size',double([]),...
+'size_error_index',int32(-999999999),...
+'size_error_lower',double([]),...
+'size_error_upper',double([])),...
'wave_vector',struct(...
'k_r',double([]),...
'k_r_error_index',int32(-999999999),...
'k_r_error_lower',double([]),...
'k_r_error_upper',double([]),...
+'k_r_norm',double([]),...
+'k_r_norm_error_index',int32(-999999999),...
+'k_r_norm_error_lower',double([]),...
+'k_r_norm_error_upper',double([]),...
'k_tor',double([]),...
'k_tor_error_index',int32(-999999999),...
'k_tor_error_lower',double([]),...
'k_tor_error_upper',double([]),...
+'k_tor_norm',double([]),...
+'k_tor_norm_error_index',int32(-999999999),...
+'k_tor_norm_error_lower',double([]),...
+'k_tor_norm_error_upper',double([]),...
'k_z',double([]),...
'k_z_error_index',int32(-999999999),...
'k_z_error_lower',double([]),...
'k_z_error_upper',double([]),...
+'k_z_norm',double([]),...
+'k_z_norm_error_index',int32(-999999999),...
+'k_z_norm_error_lower',double([]),...
+'k_z_norm_error_upper',double([]),...
'n_parallel',double([]),...
'n_parallel_error_index',int32(-999999999),...
'n_parallel_error_lower',double([]),...
@@ -164,9 +198,9 @@ struct(...
'n_perpendicular_error_upper',double([]),...
'n_tor',int32([]),...
'varying_n_tor',int32(-999999999)))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'full_wave',{{struct(...
'b_field',struct(...
'bi_normal',{{struct(...
@@ -180,7 +214,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'normal',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -192,7 +226,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -204,7 +238,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}}),...
'e_field',struct(...
'bi_normal',{{struct(...
'coefficients',double([]),...
@@ -217,7 +251,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'minus',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -229,7 +263,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'normal',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -241,7 +275,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'parallel',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -253,7 +287,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'plus',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -265,7 +299,7 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}}),...
+}}),...
'grid',struct(...
'grid_subset',{{struct(...
'base',{{struct(...
@@ -281,15 +315,15 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([]))
-;}},...
+}},...
'dimension',int32(-999999999),...
'element',{{struct(...
'object',{{struct(...
'dimension',int32(-999999999),...
'index',int32(-999999999),...
'space',int32(-999999999))
-;}})
-;}},...
+}})
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
@@ -307,11 +341,12 @@ struct(...
'tensor_covariant_error_index',int32(-999999999),...
'tensor_covariant_error_lower',double([]),...
'tensor_covariant_error_upper',double([])))
-;}},...
+}},...
'identifier',struct(...
'description','',...
'index',int32(-999999999),...
'name',''),...
+'path','',...
'space',{{struct(...
'coordinates_type',int32([]),...
'geometry_type',struct(...
@@ -323,12 +358,20 @@ struct(...
'index',int32(-999999999),...
'name',''),...
'objects_per_dimension',{{struct(...
+'geometry_content',struct(...
+'description','',...
+'index',int32(-999999999),...
+'name',''),...
'object',{{struct(...
'boundary',{{struct(...
'index',int32(-999999999),...
'neighbours',int32([]))
-;}},...
+}},...
'geometry',double([]),...
+'geometry_2d',double([]),...
+'geometry_2d_error_index',int32(-999999999),...
+'geometry_2d_error_lower',double([]),...
+'geometry_2d_error_upper',double([]),...
'geometry_error_index',int32(-999999999),...
'geometry_error_lower',double([]),...
'geometry_error_upper',double([]),...
@@ -337,9 +380,9 @@ struct(...
'measure_error_lower',double(-9e+40),...
'measure_error_upper',double(-9e+40),...
'nodes',int32([]))
-;}})
-;}})
-;}}),...
+}})
+}})
+}}),...
'k_perpendicular',{{struct(...
'coefficients',double([]),...
'coefficients_error_index',int32(-999999999),...
@@ -351,9 +394,9 @@ struct(...
'values_error_index',int32(-999999999),...
'values_error_lower',double([]),...
'values_error_upper',double([]))
-;}},...
+}},...
'time',double(-9e+40))
-;}},...
+}},...
'global_quantities',{{struct(...
'current_tor',double(-9e+40),...
'current_tor_error_index',int32(-999999999),...
@@ -401,7 +444,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'power_fast',double(-9e+40),...
@@ -452,12 +495,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'n_tor',int32([]),...
'power',double(-9e+40),...
'power_error_index',int32(-999999999),...
@@ -468,7 +511,7 @@ struct(...
'power_n_tor_error_lower',double([]),...
'power_n_tor_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'identifier',struct(...
'antenna_name','',...
'index_in_antenna',int32(-999999999),...
@@ -521,7 +564,7 @@ struct(...
'phase_error_index',int32(-999999999),...
'phase_error_lower',double([]),...
'phase_error_upper',double([])))
-;}},...
+}},...
'electrons',struct(...
'power_density_fast',double([]),...
'power_density_fast_error_index',int32(-999999999),...
@@ -607,7 +650,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'power_density_fast',double([]),...
@@ -690,12 +733,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'k_perpendicular',double([]),...
'k_perpendicular_error_index',int32(-999999999),...
'k_perpendicular_error_lower',double([]),...
@@ -718,7 +761,7 @@ struct(...
'power_inside_n_tor_error_lower',double([]),...
'power_inside_n_tor_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'profiles_2d',{{struct(...
'e_field_n_tor',{{struct(...
'minus',struct(...
@@ -748,7 +791,7 @@ struct(...
'phase_error_index',int32(-999999999),...
'phase_error_lower',double([]),...
'phase_error_upper',double([])))
-;}},...
+}},...
'electrons',struct(...
'power_density_fast',double([]),...
'power_density_fast_error_index',int32(-999999999),...
@@ -822,7 +865,7 @@ struct(...
'z_n_error_index',int32(-999999999),...
'z_n_error_lower',double(-9e+40),...
'z_n_error_upper',double(-9e+40))
-;}},...
+}},...
'label','',...
'multiple_states_flag',int32(-999999999),...
'power_density_fast',double([]),...
@@ -873,12 +916,12 @@ struct(...
'z_min_error_index',int32(-999999999),...
'z_min_error_lower',double(-9e+40),...
'z_min_error_upper',double(-9e+40))
-;}},...
+}},...
'z_ion',double(-9e+40),...
'z_ion_error_index',int32(-999999999),...
'z_ion_error_lower',double(-9e+40),...
'z_ion_error_upper',double(-9e+40))
-;}},...
+}},...
'n_tor',int32([]),...
'power_density',double([]),...
'power_density_error_index',int32(-999999999),...
@@ -889,16 +932,61 @@ struct(...
'power_density_n_tor_error_lower',double([]),...
'power_density_n_tor_error_upper',double([]),...
'time',double(-9e+40))
-;}},...
+}},...
'wave_solver_type',struct(...
'description','',...
'index',int32(-999999999),...
'name',''))
-;}},...
+}},...
'ids_properties',struct(...
'comment','',...
'creation_date','',...
'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
'provider','',...
'source','',...
'version_put',struct(...
diff --git a/matlab/TCV_IMAS/ids_empty/ids_empty_workflow.m b/matlab/TCV_IMAS/ids_empty/ids_empty_workflow.m
new file mode 100644
index 0000000000000000000000000000000000000000..232ea4bddcbb837d483490f61cf8420b18ff57ff
--- /dev/null
+++ b/matlab/TCV_IMAS/ids_empty/ids_empty_workflow.m
@@ -0,0 +1,110 @@
+function S = ids_empty_workflow
+% function S = ids_empty_workflow
+%
+% File written automatically using writestruct_to_mfile.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
+
+S = ...
+struct(...
+'code',struct(...
+'commit','',...
+'description','',...
+'library',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'name','',...
+'output_flag',int32([]),...
+'parameters','',...
+'repository','',...
+'version',''),...
+'ids_properties',struct(...
+'comment','',...
+'creation_date','',...
+'homogeneous_time',int32(-999999999),...
+'plugins',struct(...
+'infrastructure_get',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'infrastructure_put',struct(...
+'commit','',...
+'description','',...
+'name','',...
+'repository','',...
+'version',''),...
+'node',{{struct(...
+'get_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'path','',...
+'put_operation',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'readback',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}})
+}}),...
+'provenance',struct(...
+'node',{{struct(...
+'path','',...
+'sources',{{}})
+}}),...
+'provider','',...
+'source','',...
+'version_put',struct(...
+'access_layer','',...
+'access_layer_language','',...
+'data_dictionary','')),...
+'time',double([]),...
+'time_loop',struct(...
+'component',{{struct(...
+'commit','',...
+'description','',...
+'name','',...
+'parameters','',...
+'repository','',...
+'version','')
+}},...
+'time_end',double(-9e+40),...
+'time_end_error_index',int32(-999999999),...
+'time_end_error_lower',double(-9e+40),...
+'time_end_error_upper',double(-9e+40),...
+'workflow_cycle',{{struct(...
+'component',{{struct(...
+'control_float',double([]),...
+'control_float_error_index',int32(-999999999),...
+'control_float_error_lower',double([]),...
+'control_float_error_upper',double([]),...
+'control_integer',int32([]),...
+'execution_mode',int32(-999999999),...
+'index',int32(-999999999),...
+'time_interval',double(-9e+40),...
+'time_interval_error_index',int32(-999999999),...
+'time_interval_error_lower',double(-9e+40),...
+'time_interval_error_upper',double(-9e+40))
+}},...
+'time',double(-9e+40))
+}}));
diff --git a/matlab/TCV_IMAS/ids_empty/ids_list_all.m b/matlab/TCV_IMAS/ids_empty/ids_list_all.m
index 234770598e679f03fc2de922fd521441cf5ec671..1fb18199a9e7076bc5d0895646731f3525b07837 100644
--- a/matlab/TCV_IMAS/ids_empty/ids_list_all.m
+++ b/matlab/TCV_IMAS/ids_empty/ids_list_all.m
@@ -1,7 +1,9 @@
function S = ids_list_all
% function S = ids_list_all
%
-% File written automatically using writecell.m
+% File written automatically using writecell.m
+% writestruct_to_mfile with n=15, with ids_gen to generate empty IDS within IMAS version 3.39.0
+%
-S = ...
-{'amns_data';'barometry';'bolometer';'bremsstrahlung_visible';'calorimetry';'camera_ir';'camera_visible';'charge_exchange';'coils_non_axisymmetric';'controllers';'core_instant_changes';'core_profiles';'core_sources';'core_transport';'cryostat';'dataset_description';'dataset_fair';'disruption';'distribution_sources';'distributions';'divertors';'ec_launchers';'ece';'edge_profiles';'edge_sources';'edge_transport';'em_coupling';'equilibrium';'gas_injection';'gas_pumping';'gyrokinetics';'hard_x_rays';'ic_antennas';'interferometer';'iron_core';'langmuir_probes';'lh_antennas';'magnetics';'mhd';'mhd_linear';'mse';'nbi';'neutron_diagnostic';'ntms';'numerics';'pellets';'pf_active';'pf_passive';'polarimeter';'pulse_schedule';'radiation';'reflectometer_profile';'refractometer';'sawteeth';'sdn';'soft_x_rays';'spectrometer_mass';'spectrometer_uv';'spectrometer_visible';'spectrometer_x_ray_crystal';'summary';'temporary';'thomson_scattering';'tf';'transport_solver_numerics';'turbulence';'wall';'waves';};
+S = ...
+{'amns_data';'barometry';'b_field_non_axisymmetric';'bolometer';'bremsstrahlung_visible';'calorimetry';'camera_ir';'camera_visible';'camera_x_rays';'charge_exchange';'coils_non_axisymmetric';'controllers';'core_instant_changes';'core_profiles';'core_sources';'core_transport';'cryostat';'dataset_description';'dataset_fair';'disruption';'distribution_sources';'distributions';'divertors';'ec_launchers';'ece';'edge_profiles';'edge_sources';'edge_transport';'em_coupling';'equilibrium';'focs';'gas_injection';'gas_pumping';'gyrokinetics';'hard_x_rays';'ic_antennas';'interferometer';'iron_core';'langmuir_probes';'lh_antennas';'magnetics';'mhd';'mhd_linear';'mse';'nbi';'neutron_diagnostic';'ntms';'pellets';'pf_active';'pf_passive';'plasma_initiation';'polarimeter';'pulse_schedule';'radiation';'real_time_data';'reflectometer_profile';'reflectometer_fluctuation';'refractometer';'runaway_electrons';'sawteeth';'soft_x_rays';'spectrometer_mass';'spectrometer_uv';'spectrometer_visible';'spectrometer_x_ray_crystal';'summary';'temporary';'thomson_scattering';'tf';'transport_solver_numerics';'turbulence';'wall';'waves';'workflow'};
diff --git a/matlab/TCV_IMAS/idses_empty_to_mfile.m b/matlab/TCV_IMAS/idses_empty_to_mfile.m
new file mode 100644
index 0000000000000000000000000000000000000000..b6bb797f6ce7efc49f6e2df2c1470bb075ffdb4c
--- /dev/null
+++ b/matlab/TCV_IMAS/idses_empty_to_mfile.m
@@ -0,0 +1,51 @@
+function [empty_dir_out,ids_empty_structures,okflags] = idses_empty_to_mfile(dirname_for_files,varargin)
+%
+% [empty_dir_out,ids_empty_structures,okflags] = idses_empty_to_mfile(dirname_for_files,varargin);
+%
+% dirname_for_files: folder to save files, if not provided or empty, use /tmp/$USER/idses_empty_to_mfile
+%
+% generate empty ids structures and save them with writestruct_to_mfile as ascii .m files defining the structures
+% Add json output when ready
+%
+% varargin{1}: option for outputs: 1 (default) to mfiles, 2 to mfiles and json files, 3 to json files
+%
+% The procedure for updating the empty idses available for TCV/lacs is to do:
+% [empty_dir_out,ids_empty_structures,okflags] = idses_empty_to_mfile;
+% !cp -pr /tmp/$USER/idses_empty_to_mfile/* /.../gdat/matlab/TCV_IMAS/ids_empty
+% !ls -alt /.../gdat/matlab/TCV_IMAS/ids_empty
+% and rm the old files (not replaced by the cp above, since it means non existent in current version
+% add branch to gdat and merge, then deploy
+%
+% wall = ids_empty_wall; % for example gives the IDS wall structure
+% help ids_empty_wall % gives you the IMAS version it used to produce it
+%
+
+if nargin < 1 || isempty(dirname_for_files) || ~exist(dirname_for_files,'dir')
+ dirname_for_files = sprintf('/tmp/%s/idses_empty_to_mfile',getenv('USER'));
+ [dummy1,dummy2]=rmdir(dirname_for_files,'s');
+ mkdir(dirname_for_files);
+ warning('no folder provided, files will be written to: %s\n',dirname_for_files);
+end
+empty_dir_out = dirname_for_files;
+
+write_option = 1;
+if nargin>=2 && ~isempty(varargin{1})
+ write_option = varargin{1};
+end
+
+ids_list_to_generate = IDS_list;
+imas_version = getenv('IMAS_VERSION');
+n_prec = 15; % for 1e40 and -1e9+1
+provenance_text = sprintf('writestruct_to_mfile with n=%d, with ids_gen to generate empty IDS within IMAS version %s',n_prec,imas_version);
+for i=1:length(ids_list_to_generate)
+ ids_empty_structures.(ids_list_to_generate{i}) = ids_gen(ids_list_to_generate{i});
+ okflags(i) = writestruct_to_mfile(ids_empty_structures.(ids_list_to_generate{i}), ...
+ fullfile(dirname_for_files,['ids_empty_',ids_list_to_generate{i},'.m']),n_prec,provenance_text);
+end
+
+okflags(end+1) = writecell(ids_list_to_generate,fullfile(dirname_for_files,'ids_list_all.m'),n_prec,provenance_text);
+
+
+if any(okflags~=1)
+ warning('some flags not ok')
+end
diff --git a/matlab/TCV_IMAS/tcv2ids2database.m b/matlab/TCV_IMAS/tcv2ids2database.m
index 9166d42d3cb3b839076f7e15aa0bd33d158735a2..664175a4313b51c1194f1b54980d78155a6777d9 100644
--- a/matlab/TCV_IMAS/tcv2ids2database.m
+++ b/matlab/TCV_IMAS/tcv2ids2database.m
@@ -10,6 +10,7 @@ function [ids_from_tcv,varargout] = tcv2ids2database(shot,run_out,varargin);
% varargin: 'occurence': occurence value
% varargin: 'ids_names': cell, ids to load, by default all defined so far (if empty or empty string or not given)
% see tcv_available_ids for the list of IDSs available for TCV
+% varargin: 'imas_backend': "MDSplus" or "HDF5"
% varargin: 'error_bar': type (string)
% 'delta' or empty (default): meaning difference in upper is set (standard error_bar
% 'added': errorbar is added: upper=data+delta and lower=data-delta
@@ -27,6 +28,7 @@ function [ids_from_tcv,varargout] = tcv2ids2database(shot,run_out,varargin);
% example:
% ids_from_tcv = tcv2ids2database(62745,9999,'ids_names',{'pf_active'},'error_bar','added'); % to test only one ids
% ids_from_tcv = tcv2ids2database(62745,9999,'error_bar','added'); % to get all default ids's and old errorbar type
+% ids_from_tcv = tcv2ids2database(62745,9999,'ids_names',{'summary'},'imas_backend','HDF5'); % Save data in imas HDF5 backend instead of MDSplus
%
ids_from_tcv = [];
@@ -50,6 +52,7 @@ p.addOptional('run_out', [], @(x) (isnumeric(x) && isscalar(x) && (x == round(x)
p.addOptional('occurence', 0, @(x) isempty(x) || (isnumeric(x) && isscalar(x) && (x == round(x)))); % integer
ids_names = tcv_available_ids;
p.addOptional('ids_names', ids_names, @(x) isempty(x) || iscell(x)); % char or cell array
+p.addOptional('imas_backend', 'MDSplus', @(x) isempty(x) || ischar(x));
p.addOptional('error_bar', 'delta', @(x) isempty(x) || ischar(x) ); % char or cell array
p.addOptional('tree_user', getenv('USER'), @(x) isempty(x) || ischar(x) ); % char
p.addOptional('tree_tokamak', 'tcv', @(x) isempty(x) || ischar(x) ); % char
@@ -101,8 +104,9 @@ for i=1:length(params.ids_names)
end
params.ids_names = ids_names_ok;
params_tcv2ids2database = params;
-params_not_in_tcv2ids = {'run_out','occurence','tree_user','tree_tokamak','tree_majorversion'};
+params_not_in_tcv2ids = {'run_out','occurence','tree_user','tree_tokamak','tree_majorversion','imas_backend'};
params_tcv2ids = rmfield(params_tcv2ids2database,params_not_in_tcv2ids);
+
[ids_from_tcv,idsok] = tcv2ids(shot,params_tcv2ids);
ids_from_tcv.params_tcv2ids2database = params_tcv2ids2database;
@@ -128,7 +132,8 @@ end
%%
[ids_put_status] = ids2database(shot,run_out,ids_from_tcv.params_tcv2ids2database.occurence,ids_from_tcv, ...
- params_tcv2ids2database.tree_user,params_tcv2ids2database.tree_tokamak,params_tcv2ids2database.tree_majorversion);
+ params_tcv2ids2database.tree_user,params_tcv2ids2database.tree_tokamak,params_tcv2ids2database.tree_majorversion, ...
+ params_tcv2ids2database.imas_backend);
ids_from_tcv.ids_put_status = ids_put_status;
diff --git a/matlab/TCV_IMAS/tcv_get_ids_summary.m b/matlab/TCV_IMAS/tcv_get_ids_summary.m
index 777eed4318e4fddfd68f5235a3880cf9e34b1d9b..2a720beba4e976d3ab1443119ab95159cb7f7bf3 100644
--- a/matlab/TCV_IMAS/tcv_get_ids_summary.m
+++ b/matlab/TCV_IMAS/tcv_get_ids_summary.m
@@ -248,7 +248,7 @@ global_quantities_fieldnames = fieldnames(global_quantities);
for i=1:numel(global_quantities_fieldnames)
if ~any(strcmp(global_quantities_fieldnames{i},special_fields))
if ~isstruct(ids_summary.global_quantities.(global_quantities_fieldnames{i}).value) && ...
- ~isempty(global_quantities.(global_quantities_fieldnames{i}).data)
+ ~isempty(global_quantities.(global_quantities_fieldnames{i}).data)
ids_summary.global_quantities.(global_quantities_fieldnames{i}).value = interp1( ...
global_quantities.(global_quantities_fieldnames{i}).t,global_quantities.(global_quantities_fieldnames{i}).data, ...
ids_summary.time,'linear',NaN);
diff --git a/matlab/gdat.m b/matlab/gdat.m
index 11efb5931b88064d3e98894b1767e7922d8eb0d0..99271c743677156ce27598a06bda6a42cf7e88a1 100644
--- a/matlab/gdat.m
+++ b/matlab/gdat.m
@@ -187,10 +187,25 @@ try
else
args = [{shot,data_request},varargin_eff];
end
- [gdat_data,gdat_params,error_status,varargout] = feval(['gdat_' lower(machine_eff)],args{:});
- % because data request can be an actual detailed tree related signal, upper and lower case need to be kept, but other places remain with lower case when case insensitive
- % needed since some substructure have machine name like mapping_for
- gdat_data.gdat_params.machine = lower(gdat_data.gdat_params.machine);
+ % treat multiple shot numbers
+ if nargin > 0 && isnumeric(shot)
+ args_in = args;
+ if ~isempty(shot)
+ for i=1:numel(shot)
+ args{1} = shot(i);
+ [gdat_data_i,gdat_params,error_status(i),varargout_gdat] = feval(['gdat_' lower(machine_eff)],args{:});
+ gdat_data_i.gdat_params.machine = lower(gdat_data_i.gdat_params.machine);
+ gdat_data(i) = gdat_data_i;
+ end
+ else
+ [gdat_data,gdat_params,error_status,varargout_gdat] = feval(['gdat_' lower(machine_eff)],args{:});
+ end
+ else
+ [gdat_data,gdat_params,error_status,varargout_gdat] = feval(['gdat_' lower(machine_eff)],args{:});
+ % because data request can be an actual detailed tree related signal, upper and lower case need to be kept, but other places remain with lower case when case insensitive
+ % needed since some substructure have machine name like mapping_for
+ gdat_data.gdat_params.machine = lower(gdat_data.gdat_params.machine);
+ end
catch ME_gdat
warning(['problems calling gdat_' lower(machine_eff)]);
@@ -204,9 +219,13 @@ catch ME_gdat
return
end
-gdat_data.gdat_call = gdat_call;
+if numel(gdat_data) > 0
+ for i=1:numel(gdat_data)
+ gdat_data(i).gdat_call = gdat_call;
+ end
+end
-if gdat_data.gdat_params.doplot
+if numel(gdat_data) > 0 && gdat_data(1).gdat_params.doplot
try
% plot gdat_data versus 1st dim by default, if nb_dims<=2, otherwise do not plot
hhh = gdat_plot(gdat_data); % return handle to figure
diff --git a/matlab/gdat_plot.m b/matlab/gdat_plot.m
index ccbf80d03b49bead91fae55fdf1432a7e4941c77..29895699b09e889c7085e485ec014d4c66f645f3 100644
--- a/matlab/gdat_plot.m
+++ b/matlab/gdat_plot.m
@@ -31,180 +31,189 @@ end
doplot=1;
if isfield(gdat_plot_params,'doplot') && ~isempty(gdat_plot_params.doplot)
doplot = gdat_plot_params.doplot;
-elseif isfield(gdat_data,'gdat_params') && isfield(gdat_data.gdat_params,'doplot') && ~isempty(gdat_data.gdat_params.doplot)
- if gdat_data.gdat_params.doplot~=0 % assume one does not call gdat_plot not to plot
- doplot = gdat_data.gdat_params.doplot;
+elseif isfield(gdat_data(1),'gdat_params') && isfield(gdat_data(1).gdat_params,'doplot') && ~isempty(gdat_data(1).gdat_params.doplot)
+ if gdat_data(1).gdat_params.doplot~=0 % assume one does not call gdat_plot not to plot
+ doplot = gdat_data(1).gdat_params.doplot;
end
end
if doplot==0; return; end
redo_legend_from_Tags = 0;
do_legend = 1;
-if all(isfield(gdat_data,{'data','t'})) && ~isempty(gdat_data.data) && ~isempty(gdat_data.t)
- fighandle = get(0,'CurrentFigure');
- if doplot == 1
- fighandle = figure;
- elseif doplot > 1
- fighandle = figure(doplot);
- clf;
- elseif doplot == -1
- hold all
- elseif doplot < -1
- fighandle = figure(abs(doplot));
- hold all
- end
- if isfield(gdat_data,'gdat_request') && ischar(gdat_data.gdat_request) ...
- && strcmp(gdat_data.gdat_request,'eqdsk')
- % special case, plot contours of first equil
- endstr = '';
- if iscell(gdat_data.eqdsk); endstr = '{1}'; end
- eval(['contour(gdat_data.eqdsk' endstr '.rmesh,gdat_data.eqdsk' endstr '.zmesh,gdat_data.eqdsk' endstr '.psi'',100);'])
- hold on
- eval(['linehandles{end+1} = plot(gdat_data.eqdsk' endstr '.rplas,gdat_data.eqdsk' endstr '.zplas,''k'');'])
- eval(['linehandles{end+1} = plot(gdat_data.eqdsk' endstr '.rlim,gdat_data.eqdsk' endstr '.zlim,''k'');'])
- axis equal;
- title(eval(['gdat_data.eqdsk' endstr '.stitle']));
- do_legend = 0;
- elseif any(find(size(gdat_data.data)==length(gdat_data.t)))
- try
- if length(size(gdat_data.data))<=2
- if isnumeric(gdat_data.t)
- linehandles{end+1} = plot(gdat_data.t,gdat_data.data);
- elseif iscell(gdat_data.t)
- linehandles{end+1} = plot(str2num(cell2mat(gdat_data.t)),gdat_data.data);
+nb_linehandles_current = numel(linehandles);
+for ishot=1:numel(gdat_data)
+ nb_linehandles_prev = nb_linehandles_current;
+ if all(isfield(gdat_data(ishot),{'data','t'})) && ~isempty(gdat_data(ishot).data) && ~isempty(gdat_data(ishot).t)
+ fighandle = get(0,'CurrentFigure');
+ if ishot > 1 && gdat_data(1).gdat_params.doplot==1
+ % assume that for a series of shot, need doplot=-1 after 1st plot if doplot was 1 in request
+ doplot = -1;
+ end
+ if doplot == 1
+ fighandle = figure;
+ elseif doplot > 1
+ fighandle = figure(doplot);
+ clf;
+ elseif doplot == -1
+ hold all
+ elseif doplot < -1
+ fighandle = figure(abs(doplot));
+ hold all
+ end
+ if isfield(gdat_data(ishot),'gdat_request') && ischar(gdat_data(ishot).gdat_request) ...
+ && strcmp(gdat_data(ishot).gdat_request,'eqdsk')
+ % special case, plot contours of first equil
+ endstr = '';
+ if iscell(gdat_data(ishot).eqdsk); endstr = '{1}'; end
+ eval(['contour(gdat_data(ishot).eqdsk' endstr '.rmesh,gdat_data(ishot).eqdsk' endstr '.zmesh,gdat_data(ishot).eqdsk' endstr '.psi'',100);'])
+ hold on
+ eval(['linehandles{end+1} = plot(gdat_data(ishot).eqdsk' endstr '.rplas,gdat_data(ishot).eqdsk' endstr '.zplas,''k'');'])
+ eval(['linehandles{end+1} = plot(gdat_data(ishot).eqdsk' endstr '.rlim,gdat_data(ishot).eqdsk' endstr '.zlim,''k'');'])
+ axis equal;
+ title(eval(['gdat_data(ishot).eqdsk' endstr '.stitle']));
+ do_legend = 0;
+ elseif any(find(size(gdat_data(ishot).data)==length(gdat_data(ishot).t)))
+ try
+ if length(size(gdat_data(ishot).data))<=2
+ if isnumeric(gdat_data(ishot).t)
+ linehandles{end+1} = plot(gdat_data(ishot).t,gdat_data(ishot).data);
+ elseif iscell(gdat_data(ishot).t)
+ linehandles{end+1} = plot(str2num(cell2mat(gdat_data(ishot).t)),gdat_data(ishot).data);
+ end
+ else
+ disp('WARNING')
+ disp(['size(gdat_data(ishot).data) = ' num2str(size(gdat_data(ishot).data)) ', >2D thus do not try to plot'])
+ disp(' ')
+ return
+ end
+ catch ME
+ if exist('ME','var')
+ disp('Problem in gdat_plot')
+ rethrow(ME)
end
- else
- disp('WARNING')
- disp(['size(gdat_data.data) = ' num2str(size(gdat_data.data)) ', >2D thus do not try to plot'])
- disp(' ')
return
end
- catch ME
- if exist('ME','var')
- disp('Problem in gdat_plot')
- rethrow(ME)
+ if ~isfield(gdat_data(ishot),'shot'); return; end % allows to plot if just .t and .data exist
+ if doplot < 0
+ title([gdat_data(ishot).gdat_params.machine]);
+ else
+ title([gdat_data(ishot).gdat_params.machine ' #' num2str(gdat_data(ishot).shot)]);
end
- return
- end
- if ~isfield(gdat_data,'shot'); return; end % allows to plot if just .t and .data exist
- if doplot < 0
- title([gdat_data.gdat_params.machine]);
- else
- title([gdat_data.gdat_params.machine ' #' num2str(gdat_data.shot)]);
- end
- if isfield(gdat_data,'mapping_for')
- dimunits_x = gdat_data.dimunits{gdat_data.mapping_for.(gdat_data.gdat_params.machine).gdat_timedim};
- if ischar(dimunits_x)
- xlabel(['time [' dimunits_x ']']);
+ if isfield(gdat_data(ishot),'mapping_for')
+ dimunits_x = gdat_data(ishot).dimunits{gdat_data(ishot).mapping_for.(gdat_data(ishot).gdat_params.machine).gdat_timedim};
+ if ischar(dimunits_x)
+ xlabel(['time [' dimunits_x ']']);
+ else
+ xlabel(['time']);
+ end
else
xlabel(['time']);
end
- else
- xlabel(['time']);
- end
- ylabel_eff = gdat_data.label;
- if iscell(gdat_data.label) && length(gdat_data.label)>=2; ylabel_eff = gdat_data.label{end}; end
- if ~isempty(gdat_data.units)
- hylabel=ylabel([ylabel_eff '[' gdat_data.units ']'],'interpreter','none');
- else
- hylabel=ylabel(ylabel_eff,'interpreter','none');
- end
- ab=get(gca,'children');
- if iscell(gdat_data.label) && numel(gdat_data.label) > 1;
- if numel(ab)==numel(gdat_data.label) || mod(numel(ab),numel(gdat_data.label))==0
- % Assumes a single shot with several lines and labels, if mod==0 then this is a new shot, only Tag present lines
- for iab=1:numel(gdat_data.label)
- set(ab(iab),'Tag',[num2str(gdat_data.shot) ' ' gdat_data.label{end-iab+1}]);
+ ylabel_eff = gdat_data(ishot).label;
+ if iscell(gdat_data(ishot).label) && length(gdat_data(ishot).label)>=2; ylabel_eff = gdat_data(ishot).label{end}; end
+ if ~isempty(gdat_data(ishot).units)
+ hylabel=ylabel([ylabel_eff '[' gdat_data(ishot).units ']'],'interpreter','none');
+ else
+ hylabel=ylabel(ylabel_eff,'interpreter','none');
+ end
+ ab=get(gca,'children');
+ if iscell(gdat_data(ishot).label) && numel(gdat_data(ishot).label) > 1;
+ if numel(ab)==numel(gdat_data(ishot).label) || mod(numel(ab),numel(gdat_data(ishot).label))==0
+ % Assumes a single shot with several lines and labels, if mod==0 then this is a new shot, only Tag present lines
+ for iab=1:numel(gdat_data(ishot).label)
+ set(ab(iab),'Tag',[num2str(gdat_data(ishot).shot) ' ' gdat_data(ishot).label{end-iab+1}]);
+ end
+ if numel(ab)>numel(gdat_data(ishot).label), redo_legend_from_Tags = 1; end
+ end
+ if iscell(gdat_data(ishot).label) && length(ab) < length(gdat_data(ishot).label)
+ if length(ab) == 1
+ % assume combine label is best
+ tempaaa = sprintf('%s/',gdat_data(ishot).label{:});
+ hhhleg=legend(tempaaa(1:end-1));
+ set(ab(1),'Tag',[num2str(gdat_data(ishot).shot) ' ' tempaaa(1:min(10,numel(tempaaa)-1))]);
+ else
+ % not sure why would get there
+ hhhleg=legend(gdat_data(ishot).label{1:length(ab)});
+ end
+ elseif numel(ab)==numel(gdat_data(ishot).label)
+ hhhleg=legend(gdat_data(ishot).label);
+ end
+ if exist('hhhleg','var'), set(hhhleg,'Interpreter','none'); end
+ else
+ % assume one line per call
+ if isempty(gdat_data(ishot).label)
+ set(ab(1),'Tag',[num2str(gdat_data(ishot).shot)]);
+ elseif ischar(gdat_data(ishot).label)
+ % assume one signal, take max 10 chars
+ set(ab(1),'Tag',[num2str(gdat_data(ishot).shot) ' ' gdat_data(ishot).label(1:min(10,numel(gdat_data(ishot).label)))]);
+ elseif iscell(gdat_data(ishot).label) && numel(gdat_data(ishot).label) == 1
+ if isempty(gdat_data(ishot).label{1})
+ set(ab(1),'Tag',[num2str(gdat_data(ishot).shot)]);
+ else
+ set(ab(1),'Tag',[num2str(gdat_data(ishot).shot) ' ' gdat_data(ishot).label{1}(1:min(10,numel(gdat_data(ishot).label{1})))]);
+ end
end
- if numel(ab)>numel(gdat_data.label), redo_legend_from_Tags = 1; end
end
- if iscell(gdat_data.label) && length(ab) < length(gdat_data.label)
- if length(ab) == 1
- % assume combine label is best
- tempaaa = sprintf('%s/',gdat_data.label{:});
- hhhleg=legend(tempaaa(1:end-1));
- set(ab(1),'Tag',[num2str(gdat_data.shot) ' ' tempaaa(1:min(10,numel(tempaaa)-1))]);
- else
- % not sure why would get there
- hhhleg=legend(gdat_data.label{1:length(ab)});
+ if redo_legend_from_Tags
+ for iab=1:numel(ab)
+ % Use Tag for DisplayName, when overlay plots of multiple data at this stage
+ set(ab(iab),'DisplayName',strrep(get(ab(iab),'Tag'),'_','\_'));
end
- elseif numel(ab)==numel(gdat_data.label)
- hhhleg=legend(gdat_data.label);
end
- if exist('hhhleg','var'), set(hhhleg,'Interpreter','none'); end
+ zoom on;
+ end
+ maxnblines = 1;
+ nb_linehandles_current = numel(linehandles);
+ if ~exist('ab','var'), ab=get(gca,'children'); end
+ if do_legend==0 || redo_legend_from_Tags || any(strcmp(gdat_data(ishot).gdat_params.data_request,'powers')) ...
+ || (numel(ab)==numel(gdat_data(ishot).label) && numel(ab)>1)
+ % keep legend as is
else
- % assume one line per call
- if isempty(gdat_data.label)
- set(ab(1),'Tag',[num2str(gdat_data.shot)]);
- elseif ischar(gdat_data.label)
- % assume one signal, take max 10 chars
- set(ab(1),'Tag',[num2str(gdat_data.shot) ' ' gdat_data.label(1:min(10,numel(gdat_data.label)))]);
- elseif iscell(gdat_data.label) && numel(gdat_data.label) == 1
- if isempty(gdat_data.label{1})
- set(ab(1),'Tag',[num2str(gdat_data.shot)]);
+ for i=nb_linehandles_prev+1:nb_linehandles_current
+ maxnblines = max(maxnblines,numel(linehandles{i}));
+ if numel(linehandles{i}) == 1
+ set(linehandles{i},'DisplayName',[num2str(gdat_data(ishot).shot)]);
else
- set(ab(1),'Tag',[num2str(gdat_data.shot) ' ' gdat_data.label{1}(1:min(10,numel(gdat_data.label{1})))]);
+ for j=1:numel(linehandles{i})
+ set(linehandles{i}(j),'DisplayName',[num2str(gdat_data(ishot).shot) ',' num2str(j)]);
+ end
end
end
end
- if redo_legend_from_Tags
- for iab=1:numel(ab)
- % Use Tag for DisplayName, when overlay plots of multiple data at this stage
- set(ab(iab),'DisplayName',strrep(get(ab(iab),'Tag'),'_','\_'));
- end
- end
- zoom on;
- end
- maxnblines = 1;
- if ~exist('ab','var'), ab=get(gca,'children'); end
- if do_legend==0 || redo_legend_from_Tags || any(strcmp(gdat_data.gdat_params.data_request,'powers')) ...
- || (numel(ab)==numel(gdat_data.label) && numel(ab)>1)
- % keep legend as is
- else
- for i=1:numel(linehandles)
- maxnblines = max(maxnblines,numel(linehandles{i}));
- if numel(linehandles{i}) == 1
- set(linehandles{i},'DisplayName',[num2str(gdat_data.shot)]);
+ if do_legend==1 && maxnblines==1; legend show; end
+ if strcmp(gdat_data(ishot).gdat_request,'mhd')
+ % special case, add legend instead of ylabel
+ delete(hylabel);
+ legend(gdat_data(ishot).label);
+ % add spectrogram per signal
+ mhd_sum_data = 0.;
+ if isfield(gdat_data(ishot).gdat_params,'nfft') && ~isempty(gdat_data(ishot).gdat_params.nfft)
+ nfft = gdat_data(ishot).gdat_params.nfft;
else
- for j=1:numel(linehandles{i})
- set(linehandles{i}(j),'DisplayName',[num2str(gdat_data.shot) ',' num2str(j)]);
- end
+ nfft=512;
end
- end
- end
- if do_legend==1 && maxnblines==1; legend show; end
- if strcmp(gdat_data.gdat_request,'mhd')
- % special case, add legend instead of ylabel
- delete(hylabel);
- legend(gdat_data.label);
- % add spectrogram per signal
- mhd_sum_data = 0.;
- if isfield(gdat_data.gdat_params,'nfft') && ~isempty(gdat_data.gdat_params.nfft)
- nfft = gdat_data.gdat_params.nfft;
- else
- nfft=512;
- end
- tmhdm=mean(reshape(gdat_data.t(1:nfft*fix(length(gdat_data.t)/nfft)),nfft,fix(length(gdat_data.t)/nfft)));
- for i=1:size(gdat_data.data,2)
- [B,F,T]=specgram(gdat_data.data(:,i),nfft,1/mean(diff(gdat_data.t)),hanning(nfft),nfft/2);
+ tmhdm=mean(reshape(gdat_data(ishot).t(1:nfft*fix(length(gdat_data(ishot).t)/nfft)),nfft,fix(length(gdat_data(ishot).t)/nfft)));
+ for i=1:size(gdat_data(ishot).data,2)
+ [B,F,T]=specgram(gdat_data(ishot).data(:,i),nfft,1/mean(diff(gdat_data(ishot).t)),hanning(nfft),nfft/2);
+ figure;
+ imagesc(T+tmhdm(1),F/1e3,20*log10(abs(B)));axis xy;colormap jet;
+ ylabel('freq [kHz]')
+ xlabel(gdat_data(ishot).dimunits{1})
+ ylabel_eff = gdat_data(ishot).label;
+ if iscell(gdat_data(ishot).label) && length(gdat_data(ishot).label)>=i; ylabel_eff = gdat_data(ishot).label{i}; end
+ title([upper(gdat_data(ishot).gdat_params.machine) '#' num2str(gdat_data(ishot).shot) ' ' ylabel_eff])
+ mhd_sum_data = mhd_sum_data + gdat_data(ishot).data(:,i);
+ end
+ [B,F,T]=specgram(mhd_sum_data./size(gdat_data(ishot).data,2),nfft,1/mean(diff(gdat_data(ishot).t)),hanning(nfft),nfft/2);
figure;
imagesc(T+tmhdm(1),F/1e3,20*log10(abs(B)));axis xy;colormap jet;
ylabel('freq [kHz]')
- xlabel(gdat_data.dimunits{1})
- ylabel_eff = gdat_data.label;
- if iscell(gdat_data.label) && length(gdat_data.label)>=i; ylabel_eff = gdat_data.label{i}; end
- title([upper(gdat_data.gdat_params.machine) '#' num2str(gdat_data.shot) ' ' ylabel_eff])
- mhd_sum_data = mhd_sum_data + gdat_data.data(:,i);
+ xlabel(gdat_data(ishot).dimunits{1})
+ ylabel_eff = gdat_data(ishot).label;
+ if iscell(gdat_data(ishot).label); ylabel_eff = sprintf('%s ',gdat_data(ishot).label{:}); end
+ title([upper(gdat_data(ishot).gdat_params.machine) '#' num2str(gdat_data(ishot).shot) ' sum of ' ylabel_eff])
end
- [B,F,T]=specgram(mhd_sum_data./size(gdat_data.data,2),nfft,1/mean(diff(gdat_data.t)),hanning(nfft),nfft/2);
- figure;
- imagesc(T+tmhdm(1),F/1e3,20*log10(abs(B)));axis xy;colormap jet;
- ylabel('freq [kHz]')
- xlabel(gdat_data.dimunits{1})
- ylabel_eff = gdat_data.label;
- if iscell(gdat_data.label); ylabel_eff = sprintf('%s ',gdat_data.label{:}); end
- title([upper(gdat_data.gdat_params.machine) '#' num2str(gdat_data.shot) ' sum of ' ylabel_eff])
+ else
+ disp(['cannot plot gdat_data(' num2str(ishot) '), has empty data or t field'])
end
-else
- disp('cannot plot gdat_data, has empty data or t field')
end
diff --git a/matlab/generic_fit.m b/matlab/generic_fit.m
index 97532229c93b61cf1d84b709170cffdfb7071f82..2ab0d71c87e023edbc83fa404e3ba7ad45003ea3 100644
--- a/matlab/generic_fit.m
+++ b/matlab/generic_fit.m
@@ -56,12 +56,12 @@ if in_option_eff == 0
disp('no main data')
return
end
-
+
main_time_base = data_in{1}.t;
-
+
time_interval_in = [main_time_base(1) main_time_base(end)];
ij=find(main_time_base>=time_interval_in(1) & main_time_base<=time_interval_in(2));
-
+
gen_signals_data.(dataname).combined_data.t = main_time_base(ij);
gen_signals_data.(dataname).t = gen_signals_data.(dataname).combined_data.t;
for i=1:length(ij)
@@ -77,14 +77,14 @@ if in_option_eff == 0
end
gen_signals_data.(dataname).combined_data.time_interval(i,1:2) = [t1(i) t2(i)];
end
-
+
for idata=1:length(data_in)
gen_signals_data.(dataname).combined_data.rholabel{idata} = data_in{idata}.xname;
end
for i=1:length(ij)
% for each time interval, collect the data
- rhotor_data_tofit = [];
+ rhotor_data_tofit = [];
xxdata_tofit = [];
xxerr_tofit = [];
data_provenance = [];
@@ -92,18 +92,18 @@ if in_option_eff == 0
it_data{idata} = find(data_in{idata}.t>=t1(i) & data_in{idata}.t<t2(i));
% construct 1D array with data from data_in{idata}
if ~isempty(it_data{idata})
- for it=1:length(it_data{idata})
- jrho_data = find(data_in{idata}.x(:,it_data{idata}(it))>0 & data_in{idata}.x(:,it_data{idata}(it))<1.01 & data_in{idata}.data(:,it_data{idata}(it))>0);
- if length(jrho_data)>0
- rhotor_data_tofit(end+1:end+length(jrho_data)) = data_in{idata}.x(jrho_data,it_data{idata}(it));
- xxdata_tofit(end+1:end+length(jrho_data)) = data_in{idata}.data(jrho_data,it_data{idata}(it));
- xxerr_tofit(end+1:end+length(jrho_data)) = data_in{idata}.error_bar(jrho_data,it_data{idata}(it))./coeff_xx_eff(idata);
- data_provenance(end+1:end+length(jrho_data)) = idata.*ones(size(jrho_data));
- end
- end
+ for it=1:length(it_data{idata})
+ jrho_data = find(data_in{idata}.x(:,it_data{idata}(it))>0 & data_in{idata}.x(:,it_data{idata}(it))<1.01 & data_in{idata}.data(:,it_data{idata}(it))>0);
+ if length(jrho_data)>0
+ rhotor_data_tofit(end+1:end+length(jrho_data)) = data_in{idata}.x(jrho_data,it_data{idata}(it));
+ xxdata_tofit(end+1:end+length(jrho_data)) = data_in{idata}.data(jrho_data,it_data{idata}(it));
+ xxerr_tofit(end+1:end+length(jrho_data)) = data_in{idata}.error_bar(jrho_data,it_data{idata}(it))./coeff_xx_eff(idata);
+ data_provenance(end+1:end+length(jrho_data)) = idata.*ones(size(jrho_data));
+ end
+ end
end
end
-
+
if isempty(xxdata_tofit)
disp('xxdata_tofit empty')
gen_signals_data.(dataname).combined_data.perDt{i}.rho = [];
@@ -158,5 +158,3 @@ gen_signals_data.(dataname).shot = shot;
gen_signals_data.(dataname).fit.tension = tension_xx_eff;
gen_signals_data.(dataname).fit.coeff_datas = coeff_xx_eff;
gen_signals_data.(dataname).fit.rholabel = gen_signals_data.(dataname).combined_data.rholabel{1};
-
-
diff --git a/matlab/get_data_request_names_from_gdat_xxx.m b/matlab/get_data_request_names_from_gdat_xxx.m
index 728e15104fa01f798cd407f731b7715b54e364c4..ae5e9261feb802d5ef2fe9c08cbfcc5ab4571031 100644
--- a/matlab/get_data_request_names_from_gdat_xxx.m
+++ b/matlab/get_data_request_names_from_gdat_xxx.m
@@ -30,7 +30,7 @@ end
fid=fopen([machine_in '_requests_mapping.m'],'r');
nextline=fgetl(fid);
while isempty(nextline) || ~isnumeric(nextline) || nextline~=-1 %length(nextline)>2 || ~strcmp(nextline,'-1')
- if length(nextline)>7 && strcmp(nextline(1:6),' case ')
+ if length(nextline)>7 && ~isempty(regexp(nextline,'^ +case '))
ij=find(nextline==['''']);
if ~isempty(ij)
for i=1:2:length(ij)-1
diff --git a/matlab/get_grids_1d.m b/matlab/get_grids_1d.m
index b5822569ef8d33161910c05fbf11127a3d7b0729..b1ff6894b6a31c7913e1aa8b690c2da4469f8557 100644
--- a/matlab/get_grids_1d.m
+++ b/matlab/get_grids_1d.m
@@ -116,11 +116,11 @@ for it=1:length(gdat_data.t)
end
end
if ~isempty(rhovol.x) && ~isempty(rhovol.data)
- if ndim_x_rhovol==1
- gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x,rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii),tens0);
- else
- gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x(:,it_vol_eff),rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii),tens0);
- end
+ if ndim_x_rhovol==1
+ gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x,rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii),tens0);
+ else
+ gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x(:,it_vol_eff),rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii),tens0);
+ end
end
end
else
@@ -135,11 +135,11 @@ for it=1:length(gdat_data.t)
end
end
if ~isempty(rhovol.x) && ~isempty(rhovol.data)
- if ndim_x_rhovol==1
- gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x,rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii,it),tens0);
- else
- gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x(:,it_vol_eff),rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii,it),tens0);
- end
+ if ndim_x_rhovol==1
+ gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x,rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii,it),tens0);
+ else
+ gdat_data.grids_1d.rhovolnorm(1:nb_ii,it)=interpos(23,rhovol.x(:,it_vol_eff),rhovol.data(:,it_vol_eff),gdat_data.grids_1d.rhopolnorm(ii,it),tens0);
+ end
end
end
end
diff --git a/matlab/get_profiles.m b/matlab/get_profiles.m
index 5fbd0cd5ff713fc525a60542e07c3a94629f8ba1..34d4edea3bffe6ff815ebd7b1b0a55c639c04cd8 100644
--- a/matlab/get_profiles.m
+++ b/matlab/get_profiles.m
@@ -83,15 +83,15 @@ if nargin>=3
end
else
if get_profiles_params.nverbose>=1; warning(['varargin input argument nb: ' num2str(i) ...
- ' (nargin=' num2str(i+2) ') is incorrect, expects a character string']);
- end
- error_status=-11;
- return
+ ' (nargin=' num2str(i+2) ') is incorrect, expects a character string']);
+ end
+ error_status=-11;
+ return
end
end
else
if get_profiles_params.nverbose>=1; ...
- warning('number of varargin input arguments incorrect, cannot make pairs of parameters');
+ warning('number of varargin input arguments incorrect, cannot make pairs of parameters');
end
error_status=-12;
return
@@ -155,4 +155,3 @@ for i=1:length(profile_struct)
end
end
end
-
diff --git a/matlab/subcall_all2str.m b/matlab/subcall_all2str.m
index 6e5d1ee125d25ccaad650eb1ba91d844a6c8ebd4..bc88c279e055876b2631564b2e0e0862c75d3f58 100644
--- a/matlab/subcall_all2str.m
+++ b/matlab/subcall_all2str.m
@@ -33,9 +33,13 @@ for i_in=1:length(varargin)
if prod(size(aa_values))~= length(aa_values)
% multi-D input, do not treat it yet
subcall = [subcall ',''multi-D input'''];
- elseif length(aa_values) > 1
+ elseif numel(aa_values) > 1
% array
- subcall = [subcall ',[' num2str(reshape(aa_values,1,length(aa_values))) ']'];
+ if numel(aa_values) <=30
+ subcall = [subcall ',[' num2str(reshape(aa_values,1,numel(aa_values))) ']'];
+ else
+ subcall = [subcall ',[' num2str(reshape(aa_values(1:4),1,4)) ' ... ' num2str(reshape(aa_values(end-3:end),1,4)) ']'];
+ end
else
subcall = [subcall ',' num2str(aa_values) ''];
end
@@ -47,20 +51,20 @@ for i_in=1:length(varargin)
if prod(size(var_to_treat))~= length(var_to_treat)
% multi-D input, do not treat it yet
subcall = [subcall ',''multi-D input'''];
- elseif length(var_to_treat) > 1
+ elseif numel(var_to_treat) > 1
% array
- subcall = [subcall ',[' num2str(var_to_treat) ']'];
+ if numel(var_to_treat) <=30
+ subcall = [subcall ',[' num2str(reshape(var_to_treat,1,numel(var_to_treat))) ']'];
+ else
+ subcall = [subcall ',[' num2str(reshape(var_to_treat(1:4),1,4)) ' ... ' num2str(reshape(var_to_treat(end-3:end),1,4)) ']'];
+ end
else
subcall = [subcall ',' num2str(var_to_treat) ''];
end
elseif ischar(var_to_treat)
subcall = [subcall ',''' var_to_treat ''''];
elseif iscell(var_to_treat)
- subcall = [subcall ',{''' var_to_treat{1} ''''];
- for i=2:length(var_to_treat)
- subcall = [subcall ',''' var_to_treat{i} ''''];
- end
- subcall = [subcall '}'];
+ subcall = [subcall ',' cell2str(var_to_treat,3) ''];
else
warning('in subcall_all2str: case not foreseen');
end
diff --git a/matlab/tests/test_requestnames.m b/matlab/tests/test_requestnames.m
index 63595919b38cbbbedf2ad19c8636348badc1df83..557144ccdb55fdc352bb83cf17315892f15429ad 100644
--- a/matlab/tests/test_requestnames.m
+++ b/matlab/tests/test_requestnames.m
@@ -1,48 +1,63 @@
classdef (SharedTestFixtures={...
check_mds,check_gdatpaths}) ...
test_requestnames < matlab.unittest.TestCase
-
+
properties (Abstract)
Machine;
end
-
+
properties(TestParameter,Abstract)
% parameters that will vary during tests
shot;
requests_fast; % placeholders
requests_slow;
end
-
+
methods(Static)
function test_gdat_call(testCase,shot,request)
% actual function to test gdat call
testCase.assertTrue(isnumeric(str2double(shot)));
testCase.assertTrue(ischar(request));
-
+
% gdat call
gdat_call = sprintf(['gdat_' lower(testCase.Machine) '(%s,''%s'')'],shot,request);
do_gdat_call = 1;
-
+
switch request
case 'eqdsk'
% avoid writing files in /tmp, may not be allowed
gdat_call = sprintf(['gdat_%s(%s,''%s'',''write'',0)'],lower(testCase.Machine),shot,request);
+ case 'radcam'
+ % need a newer shot for tcv radcam
+ shot = 81102;
+ gdat_call = sprintf(['gdat_' lower(testCase.Machine) '(%s,''%s'')'],shot,request);
end
-
+
% logging
fprintf('Testing gdat call: %s\n',gdat_call);
-
+
if do_gdat_call
gdat_out = eval(gdat_call); %#ok<NASGU>
else
gdat_out = struct([]);
end
-
+
% in some future: check for warnings
%gdat_out = verifyWarningFree(testCase,eval(gdat_call),...
% 'Warning issued from gdat call:\n %s\n',gdat_call);
-
+
% (add optional sanity checks of gdat_out here)
+ gdat_out
+ switch request
+ case {'ece', 'expcode', 'ids', 'ni', 'ti', 'transp'}
+ % tests not yet fully implemented and empty
+ case 'rtc'
+ % in this case .data is empty, all in .scd_mems
+ testCase.assertTrue(isfield(gdat_out,'scd_mems') && isstruct(gdat_out.scd_mems));
+ % testCase.assertTrue(isstruct(gdat_out.scd_mems));
+ otherwise
+ testCase.assertTrue(isnumeric(gdat_out.data) & numel(gdat_out.data)>0);
+ end
end
end
-end
\ No newline at end of file
+end
diff --git a/matlab/tests/test_requestnames_tcv.m b/matlab/tests/test_requestnames_tcv.m
index f40ecbfa9348473a86ef5552e37e9ad0340510a7..6941e96ddac1f9ae3cc07d32ee0dc76e58b0c5d5 100644
--- a/matlab/tests/test_requestnames_tcv.m
+++ b/matlab/tests/test_requestnames_tcv.m
@@ -11,17 +11,17 @@ classdef (TestTags={'tcv'})test_requestnames_tcv < test_requestnames
requests_fast = get_all_gdat_requests('TCV','fast');
requests_slow = get_all_gdat_requests('TCV','slow');
end
-
+
methods(Test,TestTags = {'fast'})
function test_gdat_call_fast(testCase,shot,requests_fast)
testCase.test_gdat_call(testCase,shot,requests_fast);
end
end
-
+
methods(Test,TestTags = {'slow'})
function test_gdat_call_slow(testCase,shot,requests_slow)
testCase.test_gdat_call(testCase,shot,requests_slow);
end
end
-
+
end