diff --git a/crpptbx/TCV_IMAS/tcv_get_ids_equilibrium.m b/crpptbx/TCV_IMAS/tcv_get_ids_equilibrium.m index 6d30400d278e9460cba418ed1dcd2b54dc0a54b5..c9bdb3dafadda2dcb416810cc51454f84ba1f282 100644 --- a/crpptbx/TCV_IMAS/tcv_get_ids_equilibrium.m +++ b/crpptbx/TCV_IMAS/tcv_get_ids_equilibrium.m @@ -26,14 +26,14 @@ ids_equilibrium_description.vacuum_toroidal_field = vacuum_toroidal_field_desc; ids_equilibrium.time = vacuum_toroidal_field.b0.t; ids_equilibrium_description.time = '.t subfield from: [''b0'',''source'',''liuqe'']'; -ids_equilibrium.time_slice(1:length(ids_equilibrium.time)) = ids_equilibrium.time_slice(1); +ids_equilibrium.time_slice(1:numel(ids_equilibrium.time)) = ids_equilibrium.time_slice(1); % load time array data to copy to time_slices % global_quantities data into local global_quantities.* structure with correct end names and global_quantities_desc.* with description. Use temp.* and temp_desc.* structures for temporary data % brute force solution load all eqdsks -% $$$ for it=1:length(ids_equilibrium.time) +% $$$ for it=1:numel(ids_equilibrium.time) % $$$ ids_equilibrium.time(it) % $$$ temp.eqdsks{it}=gdat(params_equilibrium.shot,'eqdsk','time',ids_equilibrium.time(it),'write',0,'machine',machine); % $$$ end @@ -76,8 +76,8 @@ global_quantities_desc.w_mhd = 'w_mhd'; global_quantities_fieldnames = fieldnames(global_quantities); special_fields = {'magnetic_axis', 'psi_axis', 'q_min'}; % fields needing non-automatic treatments -for it=1:length(ids_equilibrium.time) - for i=1:length(global_quantities_fieldnames) +for it=1:numel(ids_equilibrium.time) + for i=1:numel(global_quantities_fieldnames) if ~any(strcmp(global_quantities_fieldnames{i},special_fields)) if ~isstruct(ids_equilibrium.time_slice{it}.global_quantities.(global_quantities_fieldnames{i})) ids_equilibrium.time_slice{it}.global_quantities.(global_quantities_fieldnames{i}) = ... @@ -90,7 +90,7 @@ for it=1:length(ids_equilibrium.time) end % special case -for it=1:length(ids_equilibrium.time) +for it=1:numel(ids_equilibrium.time) ids_equilibrium.time_slice{it}.global_quantities.magnetic_axis.r = temp.r_magnetic_axis.data(it); ids_equilibrium.time_slice{it}.global_quantities.magnetic_axis.z = temp.z_magnetic_axis.data(it); ids_equilibrium.time_slice{it}.global_quantities.psi_axis = temp.psi_axis.data(it) + ... @@ -136,8 +136,8 @@ temp_desc.z_lcfs = 'z_contour_edge'; boundary_fieldnames = fieldnames(boundary); special_fields = {'lcfs', 'geometric_axis', 'x_point'}; % fields needing non-automatic treatments -for it=1:length(ids_equilibrium.time) - for i=1:length(boundary_fieldnames) +for it=1:numel(ids_equilibrium.time) + for i=1:numel(boundary_fieldnames) if ~any(strcmp(boundary_fieldnames{i},special_fields)) if ~isstruct(ids_equilibrium.time_slice{it}.boundary.(boundary_fieldnames{i})) ids_equilibrium.time_slice{it}.boundary.(boundary_fieldnames{i}) = ... @@ -150,7 +150,7 @@ for it=1:length(ids_equilibrium.time) end % special cases -for it=1:length(ids_equilibrium.time) +for it=1:numel(ids_equilibrium.time) ids_equilibrium.time_slice{it}.boundary.outline.r = temp.r_lcfs.data(:,it); ids_equilibrium.time_slice{it}.boundary.outline.z = temp.z_lcfs.data(:,it); ids_equilibrium.time_slice{it}.boundary.lcfs.r = ids_equilibrium.time_slice{it}.boundary.outline.r; @@ -159,10 +159,12 @@ for it=1:length(ids_equilibrium.time) ids_equilibrium.time_slice{it}.boundary.geometric_axis.z = temp.zgeom.data(it); if temp.n_x_point.data(it) > 0 ids_equilibrium.time_slice{it}.boundary.x_point(1:temp.n_x_point.data(it)) = ids_equilibrium.time_slice{it}.boundary.x_point(1); - for i=1:length(temp.n_x_point.data(it)) + for i=1:temp.n_x_point.data(it) ids_equilibrium.time_slice{it}.boundary.x_point{i}.r = temp.r_x_point.data(i,it); ids_equilibrium.time_slice{it}.boundary.x_point{i}.z = temp.z_x_point.data(i,it); end + else + ids_equilibrium.time_slice{it}.boundary.x_point = {}; end end @@ -221,8 +223,8 @@ profiles_1d.volume = gdat(params_equilibrium.shot,'volume_rho','machine',machine profiles_1d_fieldnames = fieldnames(profiles_1d); special_fields = {'geometric_axis', 'rho_tor_norm', 'psi'}; % fields needing non-automatic treatments -for it=1:length(ids_equilibrium.time) - for i=1:length(profiles_1d_fieldnames) +for it=1:numel(ids_equilibrium.time) + for i=1:numel(profiles_1d_fieldnames) if ~any(strcmp(profiles_1d_fieldnames{i},special_fields)) if ~isstruct(ids_equilibrium.time_slice{it}.profiles_1d.(profiles_1d_fieldnames{i})) if ~ischar(profiles_1d.(profiles_1d_fieldnames{i}).data) && ~isempty(profiles_1d.(profiles_1d_fieldnames{i}).data) ... @@ -238,9 +240,9 @@ for it=1:length(ids_equilibrium.time) end % special cases -nrho = length(profiles_1d.rho_tor.x); -ntime = length(temp.psi_axis.data); -for it=1:length(ids_equilibrium.time) +nrho = numel(profiles_1d.rho_tor.x); +ntime = numel(temp.psi_axis.data); +for it=1:numel(ids_equilibrium.time) ids_equilibrium.time_slice{it}.profiles_1d.rho_tor_norm = ids_equilibrium.time_slice{it}.profiles_1d.rho_tor./ ... ids_equilibrium.time_slice{it}.profiles_1d.rho_tor(end); ids_equilibrium.time_slice{it}.profiles_1d.psi = temp.psi_axis.data(it) + ... @@ -270,8 +272,8 @@ profiles_2d.psi = gdat(params_equilibrium.shot,'psi','machine',machine); % add p profiles_2d_fieldnames = fieldnames(profiles_2d); special_fields = {'grid', 'grid_type'}; % fields needing non-automatic treatments -for it=1:length(ids_equilibrium.time) - for i=1:length(profiles_2d_fieldnames) +for it=1:numel(ids_equilibrium.time) + for i=1:numel(profiles_2d_fieldnames) if ~any(strcmp(profiles_2d_fieldnames{i},special_fields)) if ~isstruct(ids_equilibrium.time_slice{it}.profiles_2d{1}.(profiles_2d_fieldnames{i})) if ~ischar(profiles_2d.(profiles_2d_fieldnames{i}).data) && ~isempty(profiles_2d.(profiles_2d_fieldnames{i}).data) ... @@ -287,7 +289,7 @@ for it=1:length(ids_equilibrium.time) end % special cases -for it=1:length(ids_equilibrium.time) +for it=1:numel(ids_equilibrium.time) ids_equilibrium.time_slice{it}.profiles_2d{1}.grid_type.name = profiles_2d.grid_type.name; ids_equilibrium.time_slice{it}.profiles_2d{1}.grid_type.index = profiles_2d.grid_type.index; ids_equilibrium.time_slice{it}.profiles_2d{1}.grid_type.description = profiles_2d.grid_type.description; @@ -300,6 +302,6 @@ end % make arrays not filled in empty: ids_equilibrium.grids_ggd = {}; -for it=1:length(ids_equilibrium.time_slice) +for it=1:numel(ids_equilibrium.time_slice) ids_equilibrium.time_slice{it}.ggd = {}; end