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Commit 2fdcd01a authored by Antoine Cyril David Hoffmann's avatar Antoine Cyril David Hoffmann
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restart functions to load a state from an older sim

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MODULE restarts
USE basic
USE futils, ONLY: openf, closef, getarr, getatt, isgroup, isdataset,getarrnd
USE grid
USE fields
USE diagnostics_par
USE time_integration
IMPLICIT NONE
INTEGER :: rank, sz_, n_
INTEGER :: dims(1) = (/0/)
CHARACTER(LEN=50) :: dset_name
INTEGER :: pmaxe_cp, jmaxe_cp, pmaxi_cp, jmaxi_cp, n0
COMPLEX(dp), DIMENSION(:,:,:,:), ALLOCATABLE :: moments_e_cp
COMPLEX(dp), DIMENSION(:,:,:,:), ALLOCATABLE :: moments_i_cp
PUBLIC :: load_moments
CONTAINS
SUBROUTINE load_moments
CALL load_output_same_dims ! load same dimensions older moments from output file
! CALL load_output_adapt_pj ! load moments with possibly different PJ from output file
! CALL load_cp ! load from checkpoint file (meant to be deleted)
END SUBROUTINE load_moments
!******************************************************************************!
!!!!!!! Load moments from a previous output file with same PJ
!******************************************************************************!
SUBROUTINE load_output_same_dims
IMPLICIT NONE
! Checkpoint filename
WRITE(rstfile,'(a,a1,i2.2,a3)') TRIM(resfile0),'_',job2load,'.h5'
IF (my_id .EQ. 0) WRITE(*,'(3x,a)') "Resume from ", rstfile
! Open file
CALL openf(rstfile, fidrst,mpicomm=comm0)
! Get the checkpoint moments degrees to allocate memory
CALL getatt(fidrst,"/data/input/" , "pmaxe", pmaxe_cp)
CALL getatt(fidrst,"/data/input/" , "jmaxe", jmaxe_cp)
CALL getatt(fidrst,"/data/input/" , "pmaxi", pmaxi_cp)
CALL getatt(fidrst,"/data/input/" , "jmaxi", jmaxi_cp)
IF (my_id .EQ. 0) WRITE(*,*) "Pe_cp = ", pmaxe_cp
IF (my_id .EQ. 0) WRITE(*,*) "Je_cp = ", jmaxe_cp
CALL getatt(fidrst,"/data/input/" , "start_iframe5d", n0)
IF ((pmaxe_cp .NE. pmaxe) .OR. (jmaxe_cp .NE. jmaxe) .OR.&
(pmaxi_cp .NE. pmaxi) .OR. (jmaxi_cp .NE. jmaxi)) THEN
WRITE(*,*) '! Previous simulation has not the same polynomial basis ! -> EXIT'
ENDIF
! Find the last results of the checkpoint file by iteration
n_ = n0+1
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_e", n_ ! start with moments_e/000001
DO WHILE (isdataset(fidrst, dset_name)) ! If n_ is not a file we stop the loop
n_ = n_ + 1
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_e", n_ ! updtate file number
ENDDO
n_ = n_ - 1 ! n_ is not a file so take the previous one n_-1
! Read state of system from checkpoint file
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_e", n_
CALL getarrnd(fidrst, dset_name, moments_e(ips_e:ipe_e, ijs_e:ije_e, ikrs:ikre, ikzs:ikze, 1),(/1,3/))
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_i", n_
CALL getarrnd(fidrst, dset_name, moments_i(ips_i:ipe_i, ijs_i:ije_i, ikrs:ikre, ikzs:ikze, 1),(/1,3/))
! Read time dependent attributes to continue simulation
CALL getatt(fidrst, dset_name, 'cstep', cstep)
CALL getatt(fidrst, dset_name, 'time', time)
CALL getatt(fidrst, dset_name, 'jobnum', jobnum)
jobnum = jobnum+1
CALL getatt(fidrst, dset_name, 'iframe2d',iframe2d)
CALL getatt(fidrst, dset_name, 'iframe5d',iframe5d)
iframe2d = iframe2d-1; iframe5d = iframe5d-1
CALL closef(fidrst)
IF (my_id .EQ. 0) WRITE(*,'(3x,a)') "Reading from restart file "//TRIM(rstfile)//" completed!"
END SUBROUTINE load_output_same_dims
!******************************************************************************!
!******************************************************************************!
!!!!!!! Load moments from a previous output file with possible different PJ
!******************************************************************************!
SUBROUTINE load_output_adapt_pj
IMPLICIT NONE
! Checkpoint filename
WRITE(rstfile,'(a,a1,i2.2,a3)') TRIM(resfile0),'_',job2load,'.h5'
IF (my_id .EQ. 0) WRITE(*,'(3x,a)') "Resume from ", rstfile
! Open file
CALL openf(rstfile, fidrst,mpicomm=comm0)
! Get the checkpoint moments degrees to allocate memory
CALL getatt(fidrst,"/data/input/" , "pmaxe", pmaxe_cp)
CALL getatt(fidrst,"/data/input/" , "jmaxe", jmaxe_cp)
CALL getatt(fidrst,"/data/input/" , "pmaxi", pmaxi_cp)
CALL getatt(fidrst,"/data/input/" , "jmaxi", jmaxi_cp)
IF (my_id .EQ. 0) WRITE(*,*) "Pe_cp = ", pmaxe_cp
IF (my_id .EQ. 0) WRITE(*,*) "Je_cp = ", jmaxe_cp
CALL getatt(fidrst,"/data/input/" , "start_iframe5d", n0)
! Allocate the required size to load checkpoints moments
CALL allocate_array(moments_e_cp, 1,pmaxe_cp+1, 1,jmaxe_cp+1, ikrs,ikre, ikzs,ikze)
CALL allocate_array(moments_i_cp, 1,pmaxi_cp+1, 1,jmaxi_cp+1, ikrs,ikre, ikzs,ikze)
! Find the last results of the checkpoint file by iteration
n_ = n0+1
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_e", n_ ! start with moments_e/000001
DO WHILE (isdataset(fidrst, dset_name)) ! If n_ is not a file we stop the loop
n_ = n_ + 1
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_e", n_ ! updtate file number
ENDDO
n_ = n_ - 1 ! n_ is not a file so take the previous one n_-1
! Read state of system from checkpoint file
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_e", n_
CALL getarrnd(fidrst, dset_name, moments_e_cp(1:pmaxe_cp+1, 1:jmaxe_cp+1, ikrs:ikre, ikzs:ikze),(/1,3/))
WRITE(dset_name, "(A, '/', i6.6)") "/data/var5d/moments_i", n_
CALL getarrnd(fidrst, dset_name, moments_i_cp(1:pmaxi_cp+1, 1:jmaxi_cp+1, ikrs:ikre, ikzs:ikze),(/1,3/))
! Initialize simulation moments array with checkpoints ones
! (they may have a larger number of polynomials, set to 0 at the begining)
moments_e = 0._dp; moments_i = 0._dp
DO ip=1,pmaxe_cp+1
DO ij=1,jmaxe_cp+1
DO ikr=ikrs,ikre
DO ikz=ikzs,ikze
moments_e(ip,ij,ikr,ikz,:) = moments_e_cp(ip,ij,ikr,ikz)
ENDDO
ENDDO
ENDDO
ENDDO
DO ip=1,pmaxi_cp+1
DO ij=1,jmaxi_cp+1
DO ikr=ikrs,ikre
DO ikz=ikzs,ikze
moments_i(ip,ij,ikr,ikz,:) = moments_i_cp(ip,ij,ikr,ikz)
ENDDO
ENDDO
ENDDO
ENDDO
! Deallocate checkpoint arrays
DEALLOCATE(moments_e_cp)
DEALLOCATE(moments_i_cp)
! Read time dependent attributes to continue simulation
CALL getatt(fidrst, dset_name, 'cstep', cstep)
CALL getatt(fidrst, dset_name, 'time', time)
CALL getatt(fidrst, dset_name, 'jobnum', jobnum)
jobnum = jobnum+1
CALL getatt(fidrst, dset_name, 'iframe2d',iframe2d)
CALL getatt(fidrst, dset_name, 'iframe5d',iframe5d)
iframe2d = iframe2d-1; iframe5d = iframe5d-1
CALL closef(fidrst)
IF (my_id .EQ. 0) WRITE(*,'(3x,a)') "Reading from restart file "//TRIM(rstfile)//" completed!"
END SUBROUTINE load_output_adapt_pj
!******************************************************************************!
!******************************************************************************!
!!!!!!! Load moments from a previous save
!******************************************************************************!
SUBROUTINE load_cp
IMPLICIT NONE
! Checkpoint filename
WRITE(rstfile,'(a,a1,i2.2,a3)') TRIM(rstfile0),'_',job2load,'.h5'
IF (my_id .EQ. 0) WRITE(*,'(3x,a)') "Resume from previous run"
! Open file
CALL openf(rstfile, fidrst,mpicomm=MPI_COMM_WORLD)
! Get the checkpoint moments degrees to allocate memory
CALL getatt(fidrst,"/Basic/moments_e/" , "pmaxe", pmaxe_cp)
CALL getatt(fidrst,"/Basic/moments_e/" , "jmaxe", jmaxe_cp)
CALL getatt(fidrst,"/Basic/moments_i/" , "pmaxi", pmaxi_cp)
CALL getatt(fidrst,"/Basic/moments_i/" , "jmaxi", jmaxi_cp)
IF (my_id .EQ. 0) WRITE(*,*) "Pe_cp = ", pmaxe_cp
IF (my_id .EQ. 0) WRITE(*,*) "Je_cp = ", jmaxe_cp
! Allocate the required size to load checkpoints moments
CALL allocate_array(moments_e_cp, 1,pmaxe_cp+1, 1,jmaxe_cp+1, ikrs,ikre, ikzs,ikze)
CALL allocate_array(moments_i_cp, 1,pmaxi_cp+1, 1,jmaxi_cp+1, ikrs,ikre, ikzs,ikze)
! Find the last results of the checkpoint file by iteration
n_ = 0
WRITE(dset_name, "(A, '/', i6.6)") "/Basic/moments_e", n_ ! start with moments_e/000000
DO WHILE (isdataset(fidrst, dset_name)) ! If n_ is not a file we stop the loop
n_ = n_ + 1
WRITE(dset_name, "(A, '/', i6.6)") "/Basic/moments_e", n_ ! updtate file number
ENDDO
n_ = n_ - 1 ! n_ is not a file so take the previous one n_-1
! Read state of system from checkpoint file
WRITE(dset_name, "(A, '/', i6.6)") "/Basic/moments_e", n_
CALL getarr(fidrst, dset_name, moments_e_cp(1:pmaxe_cp+1, 1:jmaxe_cp+1, ikrs:ikre, ikzs:ikze),pardim=3)
WRITE(dset_name, "(A, '/', i6.6)") "/Basic/moments_i", n_
CALL getarr(fidrst, dset_name, moments_i_cp(1:pmaxi_cp+1, 1:jmaxi_cp+1, ikrs:ikre, ikzs:ikze),pardim=3)
WRITE(dset_name, "(A, '/', i6.6)") "/Basic/phi", n_
CALL getarr(fidrst, dset_name, phi(ikrs:ikre,ikzs:ikze),pardim=1)
! Initialize simulation moments array with checkpoints ones
! (they may have a larger number of polynomials, set to 0 at the begining)
moments_e = 0._dp; moments_i = 0._dp
DO ip=1,pmaxe_cp+1
DO ij=1,jmaxe_cp+1
DO ikr=ikrs,ikre
DO ikz=ikzs,ikze
moments_e(ip,ij,ikr,ikz,:) = moments_e_cp(ip,ij,ikr,ikz)
ENDDO
ENDDO
ENDDO
ENDDO
DO ip=1,pmaxi_cp+1
DO ij=1,jmaxi_cp+1
DO ikr=ikrs,ikre
DO ikz=ikzs,ikze
moments_i(ip,ij,ikr,ikz,:) = moments_i_cp(ip,ij,ikr,ikz)
ENDDO
ENDDO
ENDDO
ENDDO
! Deallocate checkpoint arrays
DEALLOCATE(moments_e_cp)
DEALLOCATE(moments_i_cp)
! Read time dependent attributes to continue simulation
CALL getatt(fidrst, dset_name, 'cstep', cstep)
CALL getatt(fidrst, dset_name, 'time', time)
CALL getatt(fidrst, dset_name, 'jobnum', jobnum)
jobnum = jobnum+1
CALL getatt(fidrst, dset_name, 'iframe2d',iframe2d)
CALL getatt(fidrst, dset_name, 'iframe5d',iframe5d)
iframe2d = iframe2d-1; iframe5d = iframe5d-1
CALL closef(fidrst)
IF (my_id .EQ. 0) WRITE(*,'(3x,a)') "Reading from restart file "//TRIM(rstfile)//" completed!"
END SUBROUTINE load_cp
!******************************************************************************!
END MODULE restarts
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