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Antoine Cyril David Hoffmann
Gyacomo
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74a74cfa
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74a74cfa
authored
10 months ago
by
Antoine Cyril David Hoffmann
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@@ -64,82 +64,79 @@ Note: For some collision operators (Sugama and Full Coulomb), you will need to r
# Changelog
### 4.x GYACOMO
### v3.x GYACOMO
> installation tutorials and python analysis scripts (SPC release)
>
4.11
background ExB shear
> background ExB shear
>
4.1
Miller geometry benchmarked
> Miller geometry benchmarked
>
4.01 S
ingular value decomposition is availale with LAPACK (used for DLRA experiments)
>
s
ingular value decomposition is availale with LAPACK (used for DLRA experiments)
>
4.0
Gyacomo is born and the code is open-source with a GNU GPLv3 license
> Gyacomo is born and the code is open-source with a GNU GPLv3 license
###
3
.x HeLaZ 3D (flux tube s-alpha)
###
v2
.x HeLaZ 3D (flux tube s-alpha)
>
3.9 P
erpendicular electromagnetic fluctuations by solving Ampere equations (benchmarked linearly)
>
p
erpendicular electromagnetic fluctuations by solving Ampere equations (benchmarked linearly)
>
3.8 B
enchmarked for CBC against GENE for various gradients values (see Dimits_fig3.m)
>
b
enchmarked for CBC against GENE for various gradients values (see Dimits_fig3.m)
>
3.7 T
he frequency plane
has been transposed
from positive kx to positive ky for easier implementation of shear. Also added 3D Z-pinch geometry
>
transpose t
he frequency plane from positive kx to positive ky for easier implementation of shear. Also added 3D Z-pinch geometry
>
3.6
MPI 3D parallelization in p, kx and z and benchmarked for each parallel options with gbms (new molix) for linear fluxtube shearless.
> MPI 3D parallelization in p, kx and z and benchmarked for each parallel options with gbms (new molix) for linear fluxtube shearless.
>
3.5 S
taggered grid for parallel odd/even coupling
>
s
taggered grid for parallel odd/even coupling
>
3.4 A
diabatic electrons
>
a
diabatic electrons
>
3.3 B
enchmarked in fluxtube s-alpha geometry linear run with molix (B.J.Frei) code and works now for shear = 0 with periodic z BC
>
b
enchmarked in fluxtube s-alpha geometry linear run with molix (B.J.Frei) code and works now for shear = 0 with periodic z BC
>
3.2 S
topping file procedure like in GBS is added
>
s
topping file procedure like in GBS is added
>
3.1 I
mplementation of mirror force
>
i
mplementation of mirror force
>
3.0
3D version and works as the 2D version if Nz = 1, the coordinates were renamed from (r,z) to (x,y,z). Now the parallel direction is ez.
> 3D version and works as the 2D version if Nz = 1, the coordinates were renamed from (r,z) to (x,y,z). Now the parallel direction is ez.
###
2
.x 2D Zpinch MPI parallel version
###
v1
.x 2D Zpinch MPI parallel version
>
2.7 V
ersatile interpolation of kperp for the cosolver matrices and corrections done on DGGK
>
v
ersatile interpolation of kperp for the cosolver matrices and corrections done on DGGK
>
2.6 C
hange of collisionality normalisation (from nu_ei to nu_ii), implementation of FCGK
>
c
hange of collisionality normalisation (from nu_ei to nu_ii), implementation of FCGK
>
2.5
GK cosolver collision implementation
> GK cosolver collision implementation
>
2.4
MPI 2D cartesian parallel (along p and kr)
> MPI 2D cartesian parallel (along p and kr)
>
2.3
GK Dougherty operator
> GK Dougherty operator
>
2.2 A
llow restart with different P,J values
>
a
llow restart with different P,J values
>
2.1 F
irst compilable parallel version (1D parallel along kr)
>
f
irst compilable parallel version (1D parallel along kr)
###
1
.x Implementation of the non linear Poisson bracket term
###
v0
.x Implementation of the non linear Poisson bracket term
>1
.4 Q
uantitative study with stationary average particle flux \Gamma_\infty
>
1uantitative study with stationary average particle flux \Gamma_\infty
>
1.3 L
inear analysis showed that a certain amount of PJ are recquired to trigger mode
>
l
inear analysis showed that a certain amount of PJ are recquired to trigger mode
>
1.2 Z
onal flows
are
observed
in a similar way to
Ricci
Rogers
2006
with
GS2
>
z
onal flows observed
, qualitative agreement with
Ricci
et al.
2006
(
GS2
)
>
1.1 Q
ualitative test : find similar turbulences as Hasegawa Wakatani system with few moments
>
q
ualitative test : find similar turbulences as Hasegawa Wakatani system with few moments
>
1.1 M
ethods in fourier_mod.f90 have been validated by tests on Hasegawa Wakatani system
>
m
ethods in fourier_mod.f90 have been validated by tests on Hasegawa Wakatani system
>
1.1 Methods in fourier_mod.f90
ha
ve
been
validated by tests
on
H
as
egawa Wakatani syste
m
>
FFTW3
ha
s
been
used to treat the convoluti
on as
a product and discrete fourier transfor
m
>
1.0 FFTW3 has been used to treat the convolution as a product and discrete fourier transform
>
load COSOlver matrices
### 0.x Wr
it
e
MOLI matlab
solver in Fortran using Monli1D as starting point
> benchmark w
it
h
MOLI matlab
results for Z-pinch (cf. kz_linear script)
>
0.6 Benchmarks now include Dougherty, Lenard-Bernstein and Full Coulomb collision operators
>
RK4 time solver
>
0.5 Load COSOlver matrice
s
>
implement moment hierarchy linear term
s
>
0.4 Benchmark with MOLI matlab results for Z-pinch (cf. kz_linear script)
>
implement linear Poisson equation in fourier space
>
0.3 RK4 time solver
>
go from 1D space to 2D fourier and from Hermite basis to Hermite-Laguerre basis
>0.2 implement moment hierarchy linear terms
>0.1 implement linear Poisson equation in fourier space
>0.0 go from 1D space to 2D fourier and from Hermite basis to Hermite-Laguerre basis
> start from GBS skeleton
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