Script to run small tests for parallel implementation

wk/test_parallel.m

+clear all;
+addpath(genpath('../matlab')) % ... add
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Set Up parameters
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% PHYSICAL PARAMETERS
+NU      = 1e-2;   % Collision frequency
+TAU     = 1.0;    % e/i temperature ratio
+ETAB    = 0.5;    % Magnetic gradient
+ETAN    = 1.0;    % Density gradient
+ETAT    = 0.0;    % Temperature gradient
+MU      = 5e-6;   % Hyper diffusivity coefficient
+NOISE0  = 1.0e-5;
+%% GRID PARAMETERS
+N       = 256;     % Frequency gridpoints (Nkr = N/2)
+L       = 66;     % Size of the squared frequency domain
+PMAXE   = 3;     % Highest electron Hermite polynomial degree
+JMAXE   = 2;     % Highest ''       Laguerre ''
+PMAXI   = 3;     % Highest ion      Hermite polynomial degree
+JMAXI   = 2;     % Highest ''       Laguerre ''
+%% TIME PARAMETERS 
+TMAX    = 400;  % Maximal time unit
+DT      = 1e-2;   % Time step
+SPS0D   = 2;    % Sampling per time unit for profiler
+SPS2D   = 2;      % Sampling per time unit for 2D arrays
+SPS5D   = 0.5;    % Sampling per time unit for 5D arrays
+RESTART = 0;      % To restart from last checkpoint
+JOB2LOAD= 0;
+%% OPTIONS
+SIMID   = 'test_parallel';  % Name of the simulation
+CO      = -2;  % Collision operator (0 : L.Bernstein, -1 : Full Coulomb, -2 : Dougherty)
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% unused
+KR0KH   = 0; A0KH = 0; % Background phi mode to drive Ray-Tay inst.
+NO_E    = 0;  % Remove electrons dynamic
+% DK    = 0;  % Drift kinetic model (put every kernel_n to 0 except n=0 to 1)
+KREQ0   = 0;      % put kr = 0
+KPAR    = 0.0;    % Parellel wave vector component
+LAMBDAD = 0.0; 
+NON_LIN = 1 *(1-KREQ0);   % activate non-linearity (is cancelled if KREQ0 = 1)
+CANCEL_ODD_P = 0;% Cancels the odd polynomials degree
+
+setup