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Antoine Cyril David Hoffmann
Gyacomo
Commits
cd641add
Commit
cd641add
authored
2 years ago
by
Antoine Cyril David Hoffmann
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important bug correction in poisson equation for adiabatic electron
parent
cc9b95e7
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src/array_mod.F90
+1
-0
1 addition, 0 deletions
src/array_mod.F90
src/memory.F90
+1
-0
1 addition, 0 deletions
src/memory.F90
src/numerics_mod.F90
+3
-2
3 additions, 2 deletions
src/numerics_mod.F90
src/poisson.F90
+21
-22
21 additions, 22 deletions
src/poisson.F90
with
26 additions
and
24 deletions
src/array_mod.F90
+
1
−
0
View file @
cd641add
...
@@ -62,6 +62,7 @@ MODULE array
...
@@ -62,6 +62,7 @@ MODULE array
REAL
(
dp
),
DIMENSION
(:,:,:,:,:),
ALLOCATABLE
::
kernel_i
REAL
(
dp
),
DIMENSION
(:,:,:,:,:),
ALLOCATABLE
::
kernel_i
! Poisson operator (ikx,iky,iz)
! Poisson operator (ikx,iky,iz)
REAL
(
dp
),
DIMENSION
(:,:,:),
ALLOCATABLE
::
inv_poisson_op
REAL
(
dp
),
DIMENSION
(:,:,:),
ALLOCATABLE
::
inv_poisson_op
REAL
(
dp
),
DIMENSION
(:,:,:),
ALLOCATABLE
::
inv_pol_ion
! Gyrocenter density for electron and ions (ikx,iky,iz)
! Gyrocenter density for electron and ions (ikx,iky,iz)
COMPLEX
(
dp
),
DIMENSION
(:,:,:),
ALLOCATABLE
::
Ne00
COMPLEX
(
dp
),
DIMENSION
(:,:,:),
ALLOCATABLE
::
Ne00
...
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src/memory.F90
+
1
−
0
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cd641add
...
@@ -17,6 +17,7 @@ SUBROUTINE memory
...
@@ -17,6 +17,7 @@ SUBROUTINE memory
CALL
allocate_array
(
phi_ZF
,
ikxs
,
ikxe
,
izs
,
ize
)
CALL
allocate_array
(
phi_ZF
,
ikxs
,
ikxe
,
izs
,
ize
)
CALL
allocate_array
(
phi_EM
,
ikys
,
ikye
,
izs
,
ize
)
CALL
allocate_array
(
phi_EM
,
ikys
,
ikye
,
izs
,
ize
)
CALL
allocate_array
(
inv_poisson_op
,
ikys
,
ikye
,
ikxs
,
ikxe
,
izs
,
ize
)
CALL
allocate_array
(
inv_poisson_op
,
ikys
,
ikye
,
ikxs
,
ikxe
,
izs
,
ize
)
CALL
allocate_array
(
inv_pol_ion
,
ikys
,
ikye
,
ikxs
,
ikxe
,
izs
,
ize
)
!Electrons arrays
!Electrons arrays
IF
(
KIN_E
)
THEN
IF
(
KIN_E
)
THEN
...
...
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src/numerics_mod.F90
+
3
−
2
View file @
cd641add
...
@@ -94,7 +94,7 @@ END SUBROUTINE evaluate_kernels
...
@@ -94,7 +94,7 @@ END SUBROUTINE evaluate_kernels
!******************************************************************************!
!******************************************************************************!
SUBROUTINE
evaluate_poisson_op
SUBROUTINE
evaluate_poisson_op
USE
basic
USE
basic
USE
array
,
Only
:
kernel_e
,
kernel_i
,
inv_poisson_op
USE
array
,
Only
:
kernel_e
,
kernel_i
,
inv_poisson_op
,
inv_pol_ion
USE
grid
USE
grid
USE
model
,
ONLY
:
tau_e
,
tau_i
,
q_e
,
q_i
,
KIN_E
USE
model
,
ONLY
:
tau_e
,
tau_i
,
q_e
,
q_i
,
KIN_E
IMPLICIT
NONE
IMPLICIT
NONE
...
@@ -125,9 +125,10 @@ SUBROUTINE evaluate_poisson_op
...
@@ -125,9 +125,10 @@ SUBROUTINE evaluate_poisson_op
END
DO
END
DO
! Adiabatic model
! Adiabatic model
ELSE
ELSE
pol_e
=
1._dp
-
qe2_taue
pol_e
=
qe2_taue
-
1._dp
ENDIF
ENDIF
inv_poisson_op
(
iky
,
ikx
,
iz
)
=
1._dp
/(
qe2_taue
+
qi2_taui
-
pol_i
-
pol_e
)
inv_poisson_op
(
iky
,
ikx
,
iz
)
=
1._dp
/(
qe2_taue
+
qi2_taui
-
pol_i
-
pol_e
)
inv_pol_ion
(
iky
,
ikx
,
iz
)
=
1._dp
/(
qi2_taui
-
pol_i
)
ENDIF
ENDIF
END
DO
zloop
END
DO
zloop
END
DO
kyloop
END
DO
kyloop
...
...
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Click to expand it.
src/poisson.F90
+
21
−
22
View file @
cd641add
...
@@ -15,9 +15,9 @@ SUBROUTINE poisson
...
@@ -15,9 +15,9 @@ SUBROUTINE poisson
IMPLICIT
NONE
IMPLICIT
NONE
INTEGER
::
ini
,
ine
,
i_
,
root_bcast
INTEGER
::
ini
,
ine
,
i_
,
root_bcast
COMPLEX
(
dp
)
::
fa_phi
,
intf_
! current flux averaged phi
COMPLEX
(
dp
)
::
f
s
a_phi
,
intf_
! current flux averaged phi
INTEGER
::
count
!! mpi integer to broadcast the electric potential at the end
INTEGER
::
count
!! mpi integer to broadcast the electric potential at the end
COMPLEX
(
dp
),
DIMENSION
(
izs
:
ize
)
::
rho_i
,
rho_e
! charge density q_a n_a
COMPLEX
(
dp
),
DIMENSION
(
izs
:
ize
)
::
rho_i
,
rho_e
,
integrant
! charge density q_a n_a
and aux var
! Execution time start
! Execution time start
CALL
cpu_time
(
t0_poisson
)
CALL
cpu_time
(
t0_poisson
)
...
@@ -27,36 +27,35 @@ SUBROUTINE poisson
...
@@ -27,36 +27,35 @@ SUBROUTINE poisson
kxloop
:
DO
ikx
=
ikxs
,
ikxe
kxloop
:
DO
ikx
=
ikxs
,
ikxe
kyloop
:
DO
iky
=
ikys
,
ikye
kyloop
:
DO
iky
=
ikys
,
ikye
!!!! Compute ion
gyro
charge density
!!!! Compute ion
particle
charge density
q_i n_i
rho_i
=
0._dp
rho_i
=
0._dp
DO
ini
=
1
,
jmaxi
+1
DO
ini
=
1
,
jmaxi
+1
DO
iz
=
izs
,
ize
rho_i
(
izs
:
ize
)
=
rho_i
(
izs
:
ize
)
&
rho_i
(
iz
)
=
rho_i
(
iz
)
&
+
q_i
*
kernel_i
(
ini
,
iky
,
ikx
,
izs
:
ize
,
0
)
*
moments_i
(
ip0_i
,
ini
,
iky
,
ikx
,
izs
:
ize
,
updatetlevel
)
+
q_i
*
kernel_i
(
ini
,
iky
,
ikx
,
iz
,
0
)
*
moments_i
(
ip0_i
,
ini
,
iky
,
ikx
,
iz
,
updatetlevel
)
ENDDO
END
DO
END
DO
!!!! Compute electron
gyro
charge density
!!!! Compute electron
particle
charge density
q_e n_e
rho_e
=
0._dp
rho_e
=
0._dp
IF
(
KIN_E
)
THEN
! Kinetic electrons
IF
(
KIN_E
)
THEN
! Kinetic electrons
DO
ine
=
1
,
jmaxe
+1
DO
ine
=
1
,
jmaxe
+1
DO
iz
=
izs
,
ize
rho_e
(
izs
:
ize
)
=
rho_e
(
izs
:
ize
)
&
rho_e
(
iz
)
=
rho_e
(
iz
)
&
+
q_e
*
kernel_e
(
ine
,
iky
,
ikx
,
izs
:
ize
,
0
)
*
moments_e
(
ip0_e
,
ine
,
iky
,
ikx
,
izs
:
ize
,
updatetlevel
)
+
q_e
*
kernel_e
(
ine
,
iky
,
ikx
,
iz
,
0
)
*
moments_e
(
ip0_e
,
ine
,
iky
,
ikx
,
iz
,
updatetlevel
)
ENDDO
END
DO
END
DO
ELSE
! Adiabatic electrons
ELSE
! Adiabatic electrons
! Adiabatic charge density (linked to flux averaged phi)
! Adiabatic charge density (linked to flux surface averaged phi)
fa_phi
=
0._dp
fsa_phi
=
0._dp
IF
(
kyarray
(
iky
)
.EQ.
0._dp
)
THEN
! take ky=0 mode (average)
! We compute the flux surface average solving a flux surface averaged
DO
ini
=
1
,
jmaxi
+1
! some over FLR contributions
! Poisson equation, i.e.
rho_e
(
izs
:
ize
)
=
Jacobian
(
izs
:
ize
,
0
)
*
moments_i
(
ip0_i
,
ini
,
iky
,
ikx
,
izs
:
ize
,
updatetlevel
)&
!
*
kernel_i
(
ini
,
iky
,
ikx
,
izs
:
ize
,
0
)
*
(
inv_poisson_op
(
iky
,
ikx
,
izs
:
ize
)
-1._dp
)
! [qi^2(1-sum_j K_j^2)/tau_i] <phi>_psi = <q_i n_i >_psi
call
simpson_rule_z
(
rho_e
(
izs
:
ize
),
intf_
)
! integrate over z
! inv_pol_ion^-1 fsa_phi = simpson(Jacobian rho_i ) * iInt_Jacobian
fa_phi
=
fa_phi
+
intf_
IF
(
kyarray
(
iky
)
.EQ.
0._dp
)
THEN
! take ky=0 mode (y-average)
ENDDO
! Prepare integrant for z-average
rho_e
(
izs
:
ize
)
=
fa_phi
*
iInt_Jacobian
!Normalize by 1/int(Jxyz)dz
integrant
(
izs
:
ize
)
=
Jacobian
(
izs
:
ize
,
0
)
*
rho_i
(
izs
:
ize
)
*
inv_pol_ion
(
iky
,
ikx
,
izs
:
ize
)
call
simpson_rule_z
(
integrant
(
izs
:
ize
),
intf_
)
! get the flux averaged phi
fsa_phi
=
intf_
ENDIF
ENDIF
rho_e
(
izs
:
ize
)
=
fsa_phi
*
iInt_Jacobian
!Normalize by 1/int(Jxyz)dz
ENDIF
ENDIF
!!!!!!!!!!!!!!! Inverting the poisson equation !!!!!!!!!!!!!!!!!!!!!!!!!!
!!!!!!!!!!!!!!! Inverting the poisson equation !!!!!!!!!!!!!!!!!!!!!!!!!!
...
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