start adding other simple reads options for futils outputs

matlab/IMAS/read_hdf5_simple.m

@@ -2,6 +2,8 @@ function h5_struct = read_hdf5_simple(ids_h5_file,varargin)
 %
 % h5_struct = read_hdf5_simple(ids_h5_file,varargin)
 %
+% varargin{1}: 'imas' (default), 'futils' (for ogyropsi files e.g.) type of hdf5
+%
 % on spcimas need to do:
 %    export LD_PRELOAD_previous=$LD_PRELOAD
 %    unset LD_PRELOAD
@@ -15,21 +17,31 @@ catch
   error('could not hdf5info(file)')
 end
 
-[a1,ids_name,a3]=fileparts(aa.Filename);
-h5_struct.ids_name = ids_name;
-h5_struct.Filename = aa.GroupHierarchy.Filename;
+file_type = 'imas',
+if nargin>=2 && ~isempty(varargin{1})
+  file_type = varargin{1}
+end
+
+switch file_type
+  case {'futils', 'standard'}
+    keyboard
+  otherwise
+    [a1,ids_name,a3]=fileparts(aa.Filename);
+    h5_struct.ids_name = ids_name;
+    h5_struct.Filename = aa.GroupHierarchy.Filename;
 
-if isfield(aa.GroupHierarchy.Groups,'Datasets')
-  for i=1:numel(aa.GroupHierarchy.Groups.Datasets)
-    if strcmp(aa.GroupHierarchy.Groups.Datasets(i).Name(1),'/')
-      istart = 2;
+    if isfield(aa.GroupHierarchy.Groups,'Datasets')
+      for i=1:numel(aa.GroupHierarchy.Groups.Datasets)
+        if strcmp(aa.GroupHierarchy.Groups.Datasets(i).Name(1),'/')
+          istart = 2;
+        else
+          istart = 1;
+        end
+        struct_flatname = regexprep(lower(regexprep(aa.GroupHierarchy.Groups.Datasets(i).Name(istart:end),'[/&[]]','.')),'\.+','_');
+        struct_flatname = regexprep(struct_flatname,[h5_struct.ids_name '_'],'');
+        h5_struct.(struct_flatname) = h5read(aa.GroupHierarchy.Groups.Datasets(i).Filename,aa.GroupHierarchy.Groups.Datasets(i).Name);
+      end
     else
-      istart = 1;
+      disp(sprintf('\n*************\nno Datasets\n*************\n'));
     end
-    struct_flatname = regexprep(lower(regexprep(aa.GroupHierarchy.Groups.Datasets(i).Name(istart:end),'[/&[]]','.')),'\.+','_');
-    struct_flatname = regexprep(struct_flatname,[h5_struct.ids_name '_'],'');
-    h5_struct.(struct_flatname) = h5read(aa.GroupHierarchy.Groups.Datasets(i).Filename,aa.GroupHierarchy.Groups.Datasets(i).Name);
-  end
-else
-  disp(sprintf('\n*************\nno Datasets\n*************\n'));
 end